580 Publikationen
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2025 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 3000586Dymek, Saskia-Michelle, Jacob, Lucas, Pühler, Alfred, and Kalinowski, Jörn. “Targeting Transcriptional Regulators Affecting Acarbose Biosynthesis in <i>Actinoplanes</i> sp. SE50/110 Using CRISPRi Silencing”. Microorganisms 13.1 (2025): 1.PUB | DOI | WoS | PubMed | Europe PMC
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2024 | Preprint | Veröffentlicht | PUB-ID: 2993878Belmann, Peter, Osterholz, Benedikt, Kleinboelting, Nils, Pühler, Alfred, Schlüter, Andreas, and Sczyrba, Alexander. “Metagenomics-Toolkit: The Flexible and Efficient Cloud-Based Metagenomics Workflow featuring Machine Learning-Enabled Resource Allocation”. bioRxiv (2024).PUB | DOI
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2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2990920
Schlüter, Laura, Busche, Tobias, Bondzio, Laila, Hütten, Andreas, Niehaus, Karsten, Schneiker-Bekel, Susanne, Pühler, Alfred, and Kalinowski, Jörn. “Sigma Factor Engineering in Actinoplanes sp. SE50/110: Expression of the Alternative Sigma Factor Gene ACSP50_0507 (sigmaHAs) Enhances Acarbose Yield and Alters Cell Morphology”. Microorganisms 12.6 (2024): 1241.PUB | PDF | DOI | WoS | PubMed | Europe PMC -
2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2990923
März, Camilla, Nölting, Sophia, Wollenschläger, Lars, Pühler, Alfred, and Kalinowski, Jörn. “Role of MalQ Enzyme in a Reconstructed Maltose/Maltodextrin Pathway in Actinoplanes sp. SE50/110”. Microorganisms 12.6 (2024): 1221.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2989112
Struck, Ben, Wiersma, Sanne Jitske, Ortseifen, Vera, Pühler, Alfred, and Niehaus, Karsten. “Comprehensive Proteome Profiling of a Xanthomonas campestris pv. Campestris B100 Culture Grown in Minimal Medium with a Specific Focus on Nutrient Consumption and Xanthan Biosynthesis”. Proteomes 12.2 (2024): 12.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2977923
Nelkner, Johanna, Huang, Liren, Lin, Timo W., Schulz, Alexander, Osterholz, Benedikt, Henke, Christian, Blom, Jochen, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Abundance, classification and genetic potential of Thaumarchaeota in metagenomes of European agricultural soils: a meta-analysis”. Environmental Microbiome 18.1 (2023): 26.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2983209
Hassa, Julia, Tubbesing, Tom Jonas, Maus, Irena, Heyer, Robert, Benndorf, Dirk, Effenberger, Mathias, Henke, Christian, Osterholz, Benedikt, Beckstette, Michael, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Uncovering Microbiome Adaptations in a Full-Scale Biogas Plant: Insights from MAG-Centric Metagenomics and Metaproteomics”. Microorganisms 11.10 (2023): 2412.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984551Förstner, Konrad U., Becker, Anke, Blom, Jochen, Bork, Peer, Clavel, Thomas, Dieckmann, Marius, Goesmann, Alexander, Götz, Barbara, Gübitz, Thomas, Hufsky, Franziska, Jünemann, Sebastian, Körner, Marie-Louise, Marz, Manja, Da Rocha, Ulisses Nunes, Overmann, Jörg, Pühler, Alfred, Rebholz-Schuhmann, Dietrich, Sczyrba, Alexander, Stoye, Jens, Vandendorpe, Justine, Van Rossum, Thea, and McHardy, Alice. “NFDI4Microbiota – national research data infrastructure for microbiota research”. Research Ideas and Outcomes 9 (2023).PUB | DOI
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2023 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2983197
Alfred Pühler, Nils-Christian Lübke, Irena Maus, and Andreas Schlüter, eds. Participation of Bielefeld University Teams in the iGEM Competition of Synthetic Biology. Bielefeld: Bielefeld University, Center for Biotechnology (CeBiTec), 2023.PUB | PDF | DOI | Download (ext.)
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967793
Köller, Nora, Hahnke, Sarah, Zverlov, Vladimir, Wibberg, Daniel, Klingl, Andreas, Busche, Tobias, Klocke, Michael, Pühler, Alfred, Schlüter, Andreas, Liebl, Wolfgang, and Maus, Irena. “Anaeropeptidivorans aminofermentans gen. nov., sp. nov., a mesophilic proteolytic salt-tolerant bacterium isolated from a laboratory-scale biogas fermenter, and emended description of Clostridium colinum”. International Journal of Systematic and Evolutionary Microbiology 72.12 (2022).PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966901
Maus, Irena, Wibberg, Daniel, Belmann, Peter, Hahnke, Sarah, Huang, Liren, Spröer, Cathrin, Bunk, Boyke, Blom, Jochen, Sczyrba, Alexander, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “The novel oligopeptide utilizing species Anaeropeptidivorans aminofermentans M3/9T, its role in anaerobic digestion and occurrence as deduced from large-scale fragment recruitment analyses”. Frontiers in Microbiology 13 (2022): 1032515.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2965631
Castellani, Lucas G., Luchetti, Abril, Nilsson, Juliet F., Pérez-Giménez, Julieta, Struck, Ben, Schlüter, Andreas, Pühler, Alfred, Niehaus, Karsten, Romero, David, Pistorio, Mariano, and Torres Tejerizo, Gonzalo. “RcgA and RcgR, Two Novel Proteins Involved in the Conjugative Transfer of Rhizobial Plasmids”. mBio (2022).PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2961446Steffens, Tim, Vorhölter, Frank-Jörg, Teckentrup, Julia, Hublik, Gerd, Walhorn, Volker, Anselmetti, Dario, Pühler, Alfred, Niehaus, Karsten, and Ortseifen, Vera. “Two Flagellar mutants of Xanthomonas campestris are characterized by enhanced xanthan production and higher xanthan viscosity”. Journal of Biotechnology 347 (2022): 9-17.PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956084
Hassa, Julia, Klang, Johanna, Benndorf, Dirk, Pohl, Marcel, Hülsemann, Benedikt, Mächtig, Torsten, Effenberger, Mathias, Pühler, Alfred, Schlüter, Andreas, and Theuerl, Susanne. “Indicative Marker Microbiome Structures Deduced from the Taxonomic Inventory of 67 Full-Scale Anaerobic Digesters of 49 Agricultural Biogas Plants”. Microorganisms 9.7 (2021): 1457.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957996
Wibberg, Daniel, Genzel, Franziska, Verwaaijen, Bart, Blom, Jochen, Rupp, Oliver, Goesmann, Alexander, Zrenner, Rita, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14”. Journal of Fungi 7.10 (2021): 832.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2021 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2960900Leitner, Frauke, Carazo, Jose Maria, Bischof, Johanna, Haley, Natalie, Audergon, Pauline, Sorzano, Carlos Oscar, del Cano, Laura, Conesa, Pablo, Cox, Cymon J., De Moro, Gianluca, Erwan, Corre, Exter, Katrina, Le Corguillé, Gildas, Dallet, Romain, Gueguen, Lorraine, Heriche, Jean-Karim, Serrano, Beatriz, Sun, Yi, Burel, Jean-Marie, Zullino, Sara, Longo, Dario Livio, Pommier, Cyril, Hallab, Asis, Eiteneuer, Constantin, David, Romain, Usadel, Bjorn, Owen, Stuart, Gruden, Kristina, Pieruschka, Roland, Sczyrba, Alexander, Pühler, Alfred, Beracochea, Martin, Finn, Robert, Gribbon, Philip, Zaliani, Andrea, Skyner, Rachael, von Delft, Frank, Skuta, Ctibor, Leach, Andrew, Tang, Jing, Capella, Salvador, Fernández, José M., Rambla, Jordi, and Beltran, Sergi. “EOSC-Life Report on the work of the initial demonstrators”., 2021.PUB | DOI
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2021 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2958276
Alfred Pühler, Andreas Tauch, and German Network for Bioinformatics Infrastructure (de.NBI), eds. Future-Oriented Analysis of Life Sciences Data by Artificial Intelligence : Contributions of the German Network for Bioinformatics Infrastructure. Bielefeld: Center for Biotechnology, de.NBI Administration Office, 2021.PUB | PDF | DOI
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2021 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2950259
Alfred Pühler and German Network for Bioinformatics Infrastructure (de.NBI), eds. Data Analysis for the COVID-19 Research: Contributions of the German Network of Bioinformatics Infrastructure. Bielefeld: Center for Biotechnology, de.NBI Administration Office, 2021.PUB | PDF | DOI
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951540Mayer, Gerhard, Muller, Wolfgang, Schork, Karin, Uszkoreit, Julian, Weidemann, Andreas, Wittig, Ulrike, Rey, Maja, Quast, Christian, Felden, Janine, Glockner, Frank Oliver, Lange, Matthias, Arend, Daniel, Beier, Sebastian, Junker, Astrid, Scholz, Uwe, Schuler, Danuta, Kestler, Hans A, Wibberg, Daniel, Pühler, Alfred, Twardziok, Sven, Eils, Jurgen, Eils, Roland, Hoffmann, Steve, Eisenacher, Martin, and Turewicz, Michael. “Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases”. Briefings in Bioinformatics (2021).PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956909
Geiger, Otto, Sohlenkamp, Christian, Vera-Cruz, Diana, Medeot, Daniela B, Martinez-Aguilar, Lourdes, Sahonero-Canavesi, Diana X, Weidner, Stefan, Pühler, Alfred, and Lopez-Lara, Isabel M. “ExoS/ChvI Two-Component Signal-Transduction System Activated in the Absence of Bacterial Phosphatidylcholine”. Frontiers in Plant Science 12 (2021): 678976.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951288
Castellani, Lucas G., Luchetti, Abril, Nilsson, Juliet F., Pérez-Giménez, Julieta, Wegener, Caren, Schlüter, Andreas, Pühler, Alfred, Lagares, Antonio, Brom, Susana, Pistorio, Mariano, Niehaus, Karsten, and Torres Tejerizo, Gonzalo A. “Exopolysaccharide Characterization of Rhizobium favelukesii LPU83 and Its Role in the Symbiosis With Alfalfa”. Frontiers in Plant Science 12 (2021): 642576.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949961Nilsson, Juliet F, Castellani, Lucas G, Draghi, Walter O, Mogro, Ezequiel G, Wibberg, Daniel, Winkler, Anika, Hansen, L H, Schlüter, Andreas, Pühler, Alfred, Kalinowski, Jörn, Torres Tejerizo, Gonzalo A, and Pistorio, Mariano. “Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress”. FEMS Microbiology Ecology 97.1 (2021): fiaa235.PUB | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939840
Hassa, Julia, Wibberg, Daniel, Maus, Irena, Pühler, Alfred, and Schlüter, Andreas. “Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter”. Microorganisms 8.1 (2020): 13.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946320
Droste, Julian, Kulisch, Martin, Wolf, Timo, Schaffert, Lena, Schneiker-Bekel, Susanne, Pühler, Alfred, and Kalinowski, Jörn. “A maltose-regulated large genomic region is activated by the transcriptional regulator MalT in Actinoplanes sp. SE50/110”. Applied microbiology and biotechnology 104 (2020): 9283–9294.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941645
Maus, Irena, Klocke, Michael, Derenkó, Jaqueline, Stolze, Yvonne, Beckstette, Michael, Jost, Carsten, Wibberg, Daniel, Blom, Jochen, Henke, Christian, Willenbücher, Katharina, Rumming, Madis, Rademacher, Antje, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics”. Environmental Microbiome 15.1 (2020): 7.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953267Schulte-Schrepping, Jonas, Reusch, Nico, Paclik, Daniela, Baßler, Kevin, Schlickeiser, Stephan, Zhang, Bowen, Krämer, Benjamin, Krammer, Tobias, Brumhard, Sophia, Bonaguro, Lorenzo, De Domenico, Elena, Wendisch, Daniel, Grasshoff, Martin, Kapellos, Theodore S., Beckstette, Michael, Pecht, Tal, Saglam, Adem, Dietrich, Oliver, Mei, Henrik E., Schulz, Axel R., Conrad, Claudia, Kunkel, Désirée, Vafadarnejad, Ehsan, Xu, Cheng-Jian, Horne, Arik, Herbert, Miriam, Drews, Anna, Thibeault, Charlotte, Pfeiffer, Moritz, Hippenstiel, Stefan, Hocke, Andreas, Müller-Redetzky, Holger, Heim, Katrin-Moira, Machleidt, Felix, Uhrig, Alexander, Bosquillon de Jarcy, Laure, Jürgens, Linda, Stegemann, Miriam, Glösenkamp, Christoph R., Volk, Hans-Dieter, Goffinet, Christine, Landthaler, Markus, Wyler, Emanuel, Georg, Philipp, Schneider, Maria, Dang-Heine, Chantip, Neuwinger, Nick, Kappert, Kai, Tauber, Rudolf, Corman, Victor, Raabe, Jan, Kaiser, Kim Melanie, Vinh, Michael To, Rieke, Gereon, Meisel, Christian, Ulas, Thomas, Becker, Matthias, Geffers, Robert, Witzenrath, Martin, Drosten, Christian, Suttorp, Norbert, von Kalle, Christof, Kurth, Florian, Händler, Kristian, Schultze, Joachim L., Aschenbrenner, Anna C., Li, Yang, Nattermann, Jacob, Sawitzki, Birgit, Saliba, Antoine-Emmanuel, Sander, Leif Erik, Angelov, Angel, Bals, Robert, Bartholomäus, Alexander, Becker, Anke, Bezdan, Daniela, Bonifacio, Ezio, Bork, Peer, Clavel, Thomas, Colome-Tatche, Maria, Diefenbach, Andreas, Dilthey, Alexander, Fischer, Nicole, Förstner, Konrad, Frick, Julia-Stefanie, Gagneur, Julien, Goesmann, Alexander, Hain, Torsten, Hummel, Michael, Janssen, Stefan, Kalinowski, Jörn, Kallies, René, Kehr, Birte, Keller, Andreas, Kim-Hellmuth, Sarah, Klein, Christoph, Kohlbacher, Oliver, Korbel, Jan O., Kurth, Ingo, Landthaler, Markus, Li, Yang, Ludwig, Kerstin, Makarewicz, Oliwia, Marz, Manja, McHardy, Alice, Mertes, Christian, Nöthen, Markus, Nürnberg, Peter, Ohler, Uwe, Ossowski, Stephan, Overmann, Jörg, Peter, Silke, Pfeffer, Klaus, Poetsch, Anna R., Pühler, Alfred, Rajewsky, Nikolaus, Ralser, Markus, Rieß, Olaf, Ripke, Stephan, Nunes da Rocha, Ulisses, Rosenstiel, Philip, Saliba, Antoine-Emmanuel, Sander, Leif Erik, Sawitzki, Birgit, Schiffer, Philipp, Schulte, Eva-Christina, Schultze, Joachim L., Sczyrba, Alexander, Stegle, Oliver, Stoye, Jens, Theis, Fabian, Vehreschild, Janne, Vogel, Jörg, von Kleist, Max, Walker, Andreas, Walter, Jörn, Wieczorek, Dagmar, and Ziebuhr, John. “Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment”. Cell 182.6 (2020): 1419-1440.e23.PUB | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949597
Maus, Irena, Tubbesing, Tom Jonas, Wibberg, Daniel, Heyer, Robert, Hassa, Julia, Tomazetto, Geizecler, Huang, Liren, Bunk, Boyke, Spröer, Cathrin, Benndorf, Dirk, Zverlov, Vladimir, Pühler, Alfred, Klocke, Michael, Sczyrba, Alexander, and Schlüter, Andreas. “The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses”. Microorganisms 8.12 (2020): 2024.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949080
Droste, Julian, Ortseifen, Vera, Schaffert, Lena, Persicke, Marcus, Schneiker-Bekel, Susanne, Pühler, Alfred, and Kalinowski, Jörn. “The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.”. BMC genomics 21 (2020): 818.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946157
Schaffert, Lena, Jacob, Lucas, Schneiker-Bekel, Susanne, Persicke, Marcus, März, Camilla, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. “pSETT4, an Improved φC31-Based Integrative Vector System for Actinoplanes sp. SE50/110”. Microbiology Resource Announcements 9.39 (2020): e00596-20.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942996
Schaffert, Lena, Schneiker-Bekel, Susanne, Gierhake, Jessica, Droste, Julian, Persicke, Marcus, Rosen, Winfried, Pühler, Alfred, and Kalinowski, Jörn. “Absence of the highly expressed small carbohydrate-binding protein Cgt improves the acarbose formation in Actinoplanes sp. SE50/110”. Applied Microbiology and Biotechnology 104 (2020): 5395–5408.PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
Nelkner, Johanna, Henke, Christian, Lin, Timo Wentong, Pätzold, Wiebke, Hassa, Julia, Jaenicke, Sebastian, Grosch, Rita, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes”. Genes 10.6 (2019): 424.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936839
Nelkner, Johanna, Tejerizo, Gonzalo Torres, Hassa, Julia, Lin, Timo Wentong, Witte, Julian, Verwaaijen, Bart, Winkler, Anika, Bunk, Boyke, Spröer, Cathrin, Overmann, Jörg, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics”. Genes 10.8 (2019): 601.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939194Mayer, Gerhard, Quast, Christian, Felden, Janine, Lange, Matthias, Prinz, Manuel, Pühler, Alfred, Lawerenz, Chris, Scholz, Uwe, Gloeckner, Frank Oliver, Mueller, Wolfgang, Marcus, Katrin, and Eisenacher, Martin. “A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects”. BRIEFINGS IN BIOINFORMATICS 20.4 (2019): 1215-1221.PUB | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936223
Belmann, Peter, Fischer, Björn, Krüger, Jan, Procházka, Michal, Rasche, Helena, Prinz, Manuel, Hanussek, Maximilian, Lang, Martin, Bartusch, Felix, Gläßle, Benjamin, Krüger, Jens, Pühler, Alfred, and Sczyrba, Alexander. “de.NBI Cloud federation through ELIXIR AAI”. F1000Research 8 (2019): 842.PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899
López, J. L., Lozano, M. J., Lagares, A., Fabre, M. L., Draghi, W. O., Del Papa, M. F., Pistorio, M., Becker, A., Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, Blom, J., Goesmann, A., and Lagares, A. “Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry”. mBio 10.3 (2019): e00505-19.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413
Schaffert, Lena, Schneiker-Bekel, Susanne, Dymek, Saskia, Droste, Julian, Persicke, Marcus, Busche, Tobias, Brandt, David, Pühler, Alfred, and Kalinowski, Jörn. “Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110”. Frontiers in Microbiology 10 (2019): 2448.PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439
Schaffert, Lena, März, Camilla, Burkhardt, Lisa, Droste, Julian, Brandt, David, Busche, Tobias, Rosen, Winfried, Schneiker-Bekel, Susanne, Persicke, Marcus, Pühler, Alfred, and Kalinowski, Jörn. “Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110”. Microbial Cell Factories 18.1 (2019): 114.PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556
Verwaaijen, Bart, Wibberg, Daniel, Winkler, Anika, Zrenner, Rita, Bednarz, Hanna, Niehaus, Karsten, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani”. Scientific Reports 9.1 (2019): 7221.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934570Castellani, Lucas G., Nilsson, Juliet F., Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, Brom, Susana, Pistorio, Mariano, and Tejerizo, Gonzalo Torres. “Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83”. Plasmid 103 (2019): 9-16.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920168
Tomazetto, Geizecler, Hahnke, Sarah, Wibberg, Daniel, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “Proteiniphilum saccharofermentans str. M3/6 T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions”. Biotechnology Reports 18 (2018): e00254.PUB | PDF | DOI
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930510Alkhateeb, Rabeaa, Vorhölter, Frank-Jörg, Steffens, Tim, Rückert, Christian, Ortseifen, Vera, Hublik, Gerd, Niehaus, Karsten, and Pühler, Alfred. “Comparative transcription profiling of two fermentation cultures of Xanthomonas campestris pv. campestris B100 sampled in the growth and in the stationary phase”. Applied Microbiology and Biotechnology 102.15 (2018): 6613-6625.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920169Salto, Ileana P., Torres Tejerizo, Gonzalo, Wibberg, Daniel, Pühler, Alfred, Schlüter, Andreas, and Pistorio, Mariano. “Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats”. Scientific Reports 8.1 (2018): 7783.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920170Hassa, Julia, Maus, Irena, Off, Sandra, Pühler, Alfred, Scherer, Paul, Klocke, Michael, and Schlüter, Andreas. “Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants”. Applied Microbiology and Biotechnology 102.12 (2018): 5045-5063.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750Maus, Irena, Rumming, Madis, Bergmann, Ingo, Heeg, Kathrin, Pohl, Marcel, Nettmann, Edith, Jaenicke, Sebastian, Blom, Jochen, Pühler, Alfred, Schlüter, Andreas, Sczyrba, Alexander, and Klocke, Michael. “Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors”. Biotechnology for Biofuels 11.1 (2018): 167.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929Stolze, Yvonne, Bremges, Andreas, Maus, Irena, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants”. Microbial Biotechnology 11.4 (2018): 667-679.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037Verwaaijen, Bart, Wibberg, Daniel, Nelkner, Johanna, Gordin, Miriam, Rupp, Oliver, Winkler, Anika, Bremges, Andreas, Blom, Jochen, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome”. Journal of Biotechology 267 (2018): 12-18.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920160Arnold, Walter, Grotjohann, Norbert, Pühler, Alfred, Röllke, Kerstin, and Selbitschka, Werner. “Die CeBiT ec Schülerakademie „Synthetische Biologie/Biotechnologie “– Begabtenförderung in einem zukunftsträchtigen Forschungsfeld”. ABB-Information. Jahresheft 2017 (2018).PUB
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920173Wibberg, Daniel, Salto, Ileana P., Eikmeyer, Felix G., Maus, Irena, Winkler, Anika, Nordmann, Patrice, Pühler, Alfred, Poirel, Laurent, and Schlüter, Andreas. “Complete Genome Sequencing of Acinetobacter baumannii Strain K50 Discloses the Large Conjugative Plasmid pK50a Encoding Carbapenemase OXA-23 and Extended-Spectrum β-Lactamase GES-11”. Antimicrobial Agents and Chemotherapy 62.5 (2018): e00212-18.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913116
Wolf, Timo, Droste, Julian, Gren, Tetiana, Ortseifen, Vera, Schneiker-Bekel, Susanne, Zemke, Till, Pühler, Alfred, and Kalinowski, Jörn. “The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110”. BMC Genomics 18.1 (2017): 562.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911997Omar Draghi, Walter, Florencia Del Papa, Maria, Barsch, Aiko, Albicoro, Francisco J., Lozano, Mauricio J., Pühler, Alfred, Niehaus, Karsten, and Lagares, Antonio. “A metabolomic approach to characterize the acid-tolerance response in Sinorhizobium meliloti”. METABOLOMICS 13.6 (2017): 71.PUB | DOI | WoS
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516
Maus, Irena, Bremges, Andreas, Stolze, Yvonne, Hahnke, Sarah, Cibis, Katharina G., Koeck, Daniela E., Kim, Yong S., Kreubel, Jana, Hassa, Julia, Wibberg, Daniel, Weimann, Aaron, Off, Sandra, Stantscheff, Robbin, Zverlov, Vladimir V., Schwarz, Wolfgang H., König, Helmut, Liebl, Wolfgang, Scherer, Paul, McHardy, Alice C., Sczyrba, Alexander, Klocke, Michael, Pühler, Alfred, and Schlüter, Andreas. “Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes”. Biotechnology for Biofuels 10.1 (2017): 264.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912114
Verwaaijen, Bart, Wibberg, Daniel, Kröber, Magdalena, Winkler, Anika, Zrenner, Rita, Bednarz, Hanna, Niehaus, Karsten, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)”. PLOS ONE 12.5 (2017): e0177278.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916490Wibberg, Daniel, Genzel, Franziska, Verwaaijen, Bart, Blom, Jochen, Rupp, Oliver, Goesmann, Alexander, Zrenner, Rita, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Draft genome sequence of the potato pathogen Rhizoctonia solani AG3-PT isolate Ben3”. Archives of Microbiology 199.7 (2017): 1065-1068.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910369
Maus, Irena, Kim, Yong Sung, Wibberg, Daniel, Stolze, Yvonne, Off, Sandra, Antonczyk, Sebastian, Pühler, Alfred, Scherer, Paul, and Schlüter, Andreas. “Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis”. Journal of Microbiology and Biotechnology 27.2 (2017): 321-334.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908419
Torres Tejerizo, Gonzalo Arturo, Wibberg, Daniel, Winkler, Anika, Ormeño-Orrillo, Ernesto, Martínez-Romero, Esperanza, Niehaus, Karsten, Pühler, Alfred, Kalinowski, Jörn, Lagares, Antonio, Schlüter, Andreas, and Pistorio, Mariano. “Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T”. Genome Announcements 5.4 (2017): e01513-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916528Wolf, Timo, Schneiker-Bekel, Susanne, Neshat, Armin, Ortseifen, Vera, Wibberg, Daniel, Zemke, Till, Pühler, Alfred, and Kalinowski, Jörn. “Genome improvement of the acarbose producer Actinoplanes sp SE50/110 and annotation refinement based on RNA-seq analysis”. JOURNAL OF BIOTECHNOLOGY 251 (2017): 112-123.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916470Tomazetto, Geizecler, Hahnke, Sarah, Langer, Thomas, Wibberg, Daniel, Blom, Jochen, Maus, Irena, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor”. Journal of Biotechnology 257 (2017): 178-186.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910373Bartholomäus, Anika, Wibberg, Daniel, Winkler, Anika, Pühler, Alfred, Schlüter, Andreas, and Varrelmann, Mark. “Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales”. Archives of Virology 162.2 (2017): 555-559.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916406Lasek, Robert, Dziewit, Lukasz, Ciok, Anna, Decewicz, Przemyslaw, Romaniuk, Krzysztof, Jedrys, Zuzanna, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. “Genome content, metabolic pathways and biotechnological potential of the psychrophilic Arctic bacterium Psychrobacter sp DAB_AL43B, a source and a host of novel Psychrobacter-specific vectors”. Journal of Biotechnology 263 (2017): 64-74.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916435Czarnecki, Jakub, Dziewit, Lukasz, Puzyna, Maria, Prochwicz, Emilia, Tudek, Agnieszka, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. “Lifestyle-determining extrachromosomal replicon pAMV1 and its contribution to the carbon metabolism of the methylotrophic bacterium Paracoccus aminovorans JCM 7685”. Environmental Microbiology 19.11 (2017): 4536-4550.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914538Ortseifen, Vera, Kalinowski, Jörn, Pühler, Alfred, and Rückert, Christian. “The complete genome sequence of the actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) carrying gene clusters for the biosynthesis of tetracenomycin C, 5`-hydroxy streptomycin, and acarbose.”. J Biotechnol 262 (2017): 84-88.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911777Torres Tejerizo, Gonzalo Arturo, Kim, Yong Sung, Maus, Irena, Wibberg, Daniel, Winkler, Anika, Off, Sandra, Pühler, Alfred, Scherer, Paul, and Schlüter, Andreas. “Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste”. Journal of Biotechnology 247 (2017): 1-5.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911462Alkhateeb, Rabeaa, Rückert, Christian, Rupp, Oliver, Pucker, Boas, Hublik, Gerd, Wibberg, Daniel, Niehaus, Karsten, Pühler, Alfred, and Vorhölter, Frank-Jörg. “Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data”. Journal of Biotechnology 253 (2017): 55-61.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917144Wibberg, Daniel, Andersson, Louise, Tzelepis, Georgios, Rupp, Oliver, Blom, Jochen, Jelonek, Lukas, Pühler, Alfred, Fogelqvist, Johan, Varrelmann, Mark, Schlüter, Andreas, and Dixelius, Christina. “Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes”. BMC Genomics 17.1 (2016): 245.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907431Bartholomaeus, Anika, Wibberg, Daniel, Winkler, Anika, Pühler, Alfred, Schlüter, Andreas, and Varrelmann, Mark. “Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV”. PLOS ONE 11.11 (2016): e0165965.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905122Draghi, W. O., Del Papa, M. F., Hellweg, C., Watt, S. A., Watt, T. F., Barsch, A., Lozano, M. J., Lagares, A., Jr., Salas, M. E., Lopez, J. L., Albicoro, F. J., Nilsson, J. F., Torres Tejerizo, G. A., Luna, M. F., Pistorio, M., Boiardi, J. L., Pühler, Alfred, Weidner, Stefan, Niehaus, Karsten, and Lagares, A. “A consolidated analysis of the physiologic and molecular responses induced under acid stress in the legume-symbiont model-soil bacterium Sinorhizobium meliloti”. SCIENTIFIC REPORTS 6.1 (2016): 29278.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260Maus, Irena, Koeck, Daniela E., Cibis, Katharina G., Hahnke, Sarah, Kim, Yong S., Langer, Thomas, Kreubel, Jana, Erhard, Marcel, Bremges, Andreas, Off, Sandra, Stolze, Yvonne, Jaenicke, Sebastian, Goesmann, Alexander, Sczyrba, Alexander, Scherer, Paul, König, Helmut, Schwarz, Wolfgang H., Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schlüter, Andreas, and Klocke, Michael. “Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates”. Biotechnology for Biofuels 9.1 (2016): 171.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691Martini, Maria C., Wibberg, Daniel, Lozano, Mauricio, Torres Tejerizo, Gonzalo, Albicoro, Francisco J., Jaenicke, Sebastian, van Elsas, Jan Dirk, Petroni, Alejandro, Garcillan-Barcia, M. Pilar, de la Cruz, Fernando, Schlüter, Andreas, Pühler, Alfred, Pistorio, Mariano, Lagares, Antonio, and Del Papa, Maria F. “Genomics of high molecular weight plasmids isolated from an on-farm biopurification system”. Scientific Reports 6.1 (2016): 28284.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900928Nesme, Joseph, Achouak, Wafa, Agathos, Spiros, Bailey, Mark, Baldrian, Petr, Brunel, Dominique, Frostegard, Asa, Heulin, Thierry, Jansson, Janet K., Jurkevitch, Edouard, Kowalchuk, George A., Kruus, Kristiina Leena, Lagares, Antonio, Lapin-Scott, Hilary M., Le Paslier, Denis, ic-Mulec, Ines, Murrell, Colin, Myrold, David D., Nalin, Renaud, Nannipieri, Paolo, Neufeld, Josh David, O'Gara, Fergal, Parnell, John Jacob, Pühler, Alfred, Pylro, Victor, Ramos, Juan Luis, Roesch, Luiz, Schleper, Christa, Schloter, Michael, Sczyrba, Alexander, Sessitsch, Angela, Sjöling, Sara, Sørensen, Jan, Sørensen, Søren J, Tebbe, Christoph C., Topp, Ed, Tsiamis, George, Van Elsas, Jan Dirk, Van Keulen, Geertje, Wagner, Michael, Widmer, Franco, Zhang, Tong, Zhang, Xiaojun, Zhao, Liping, Zhu, Yong-Guan, Vogel, Timothy M., and Simonet, Pascal. “Back to the future of soil metagenomics”. Frontiers in Microbiology 7 (2016): 73.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993
Koeck, Daniela E., Maus, Irena, Wibberg, Daniel, Winkler, Anika, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. “Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor”. Genome Announcements 4.4 (2016): e00687-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze, Yvonne, Bremges, Andreas, Rumming, Madis, Henke, Christian, Maus, Irena, Pühler, Alfred, Sczyrba, Alexander, and Schlüter, Andreas. “Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants”. Biotechnology for Biofuels 9.1 (2016): 156.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970
Maus, Irena, Wibberg, Daniel, Winkler, Anika, Pühler, Alfred, Schnürer, Anna, and Schlüter, Andreas. “Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor”. Genome Announcements 4.3 (2016): e00568-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978
Koeck, Daniela E., Maus, Irena, Wibberg, Daniel, Winkler, Anika, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. “Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor”. Genome Announcements 4.3 (2016): e00609-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907676
Jaenicke, Sebastian, Bunk, Boyke, Wibberg, Daniel, Spröer, Cathrin, Hersemann, Lena, Blom, Jochen, Winkler, Anika, Schatschneider, Sarah, Albaum, Stefan, Kölliker, Roland, Goesmann, Alexander, Pühler, Alfred, Overmann, Jörg, and Vorhölter, Frank-Jörg. “Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T)”. Genome Announcements 4.6 (2016): e01334-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903660
Steffens, Tim, Vorhölter, Frank-Jörg, Giampa, Marco, Hublik, Gerd, Pühler, Alfred, and Niehaus, Karsten. “The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100”. BMC Microbiology 16.1 (2016): 93.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715Koeck, Daniela E., Wibberg, Daniel, Maus, Irena, Winkler, Anika, Albersmeier, Andreas, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. “Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")"”. Journal of Biotechnology 237 (2016): 35.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630Gren, Tetiana, Ortseifen, Vera, Wibberg, Daniel, Schneiker-Bekel, Susanne, Bednarz, Hanna, Niehaus, Karsten, Zemke, Till, Persicke, Marcus, Pühler, Alfred, and Kalinowski, Jörn. “Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors”. Journal of Biotechnology 232 (2016): 79-88.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908260Torres Tejerizo, Gonzalo Arturo, Antonio Rogel, Marco, Ormeno-Orrillo, Ernesto, Julia Althabegoiti, Maria, Fernanda Nilsson, Juliet, Niehaus, Karsten, Schlüter, Andreas, Pühler, Alfred, Florencia Del Papa, Maria, Lagares, Antonio, Martinez-Romero, Esperanza, and Pistorio, Mariano. “Rhizobium favelukesii sp nov., isolated from the root nodules of alfalfa (Medicago sativa L)”. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 66.11 (2016): 4451-4457.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917142Wibberg, Daniel, Andersson, Louise, Rupp, Oliver, Goesmann, Alexander, Pühler, Alfred, Varrelmann, Mark, Dixelius, Christina, and Schlüter, Andreas. “Draft genome sequence of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB strain BBA69670”. Journal of Biotechnology 222 (2016): 11-12.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489Maus, Irena, Cibis, Katharina Gabriela, Bremges, Andreas, Stolze, Yvonne, Wibberg, Daniel, Tomazetto, Geizecler, Blom, Jochen, Sczyrba, Alexander, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. “Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment”. Journal of Biotechnology 232 (2016): 50-60.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302Wibberg, Daniel, Bremges, Andreas, Dammann-Kalinowski, Tanja, Maus, Irena, Igeño, Maria Isabel, Vogelsang, Ralph, König, Christoph, Luque-Almagro, Víctor M., Roldán, Maria Dolores, Sczyrba, Alexander, Moreno-Vivián, Conrado, Blasco, Rafael, Pühler, Alfred, and Schlüter, Andreas. “Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing”. Journal of Biotechnology 232 (2016): 61-68.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126Liebe, Sebastian, Wibberg, Daniel, Winkler, Anika, Pühler, Alfred, Schlüter, Andreas, and Varrelmann, Mark. “Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes”. FEMS Microbiology Ecology 92.2 (2016): fiw004.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505Wolf, Timo, Gren, Tetiana, Thieme, Eric, Wibberg, Daniel, Zemke, Till, Pühler, Alfred, and Kalinowski, Jörn. “Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System”. Journal of Biotechnology 231 (2016): 122-128.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675Krahn, Thomas, Wibberg, Daniel, Maus, Irena, Winkler, Anika, Bontron, Séverine, Sczyrba, Alexander, Nordmann, Patrice, Pühler, Alfred, Poirel, Laurent, and Schlüter, Andreas. “Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene.”. Antimicrobial Agents and Chemotherapy 60.5 (2016): 3032-3040.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901808Alkhateeb, Rabeaa, Vorhölter, Frank-Jörg, Rückert, Christian, Mentz, Almut, Wibberg, Daniel, Hublik, Gerd, Niehaus, Karsten, and Pühler, Alfred. “Genome wide transcription start sites analysis of the Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan.”. J Biotechnol 225 (2016): 18-28.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901243Wendler, Sergej, Otto, Andreas, Ortseifen, Vera, Bonn, Florian, Neshat, Armin, Schneiker-Bekel, Susanne, Wolf, Timo, Zemke, Till, Wehmeier, Udo F., Hecker, Michael, Kalinowski, Jörn, Becher, Doerte, and Pühler, Alfred. “Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters”. Journal of Proteomics 131 (2016): 140-148.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905504Kröber, Magdalena, Verwaaijen, Bart, Wibberg, Daniel, Winkler, Anika, Pühler, Alfred, and Schlüter, Andreas. “Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing”. Journal of Biotechnology 231 (2016): 212-223.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905629Tomazetto, Geizecler, Hahnke, Sarah, Koeck, Daniela E., Wibberg, Daniel, Maus, Irena, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “Complete genome analysis of Clostridium bornimense strain M2/40(T). A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor”. Journal of Biotechnology 232 (2016): 38-49.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905631Leßmeier, Lennart, Alkhateeb, Rabeaa, Schulte, Fabian, Steffens, Tim, Loka, Tobias Pascal, Pühler, Alfred, Niehaus, Karsten, and Vorhölter, Frank-Jörg. “Applying DNA affinity chromatography to specifically screen for sucrose-related DNA-binding transcriptional regulators of Xanthomonas campestris”. Journal of Biotechnology 232 (2016): 89-98.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234Ortseifen, Vera, Stolze, Yvonne, Maus, Irena, Sczyrba, Alexander, Bremges, Andreas, Albaum, Stefan, Jaenicke, Sebastian, Fracowiak, Jochen, Pühler, Alfred, and Schlüter, Andreas. “An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant”. Journal of Biotechnology 231 (2016): 268-279.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906
Bremges, Andreas, Maus, Irena, Belmann, Peter, Eikmeyer, Felix Gregor, Winkler, Anika, Albersmeier, Andreas, Pühler, Alfred, Schlüter, Andreas, and Sczyrba, Alexander. “Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant”. GigaScience 4.1 (2015): 33.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946456Theuerl, Susanne, Kohrs, Fabian, Benndorf, Dirk, Maus, Irena, Wibberg, Daniel, Schlüter, Andreas, Kausmann, Robert, Heiermann, Monika, Rapp, Erdmann, Reichl, Udo, Pühler, Alfred, and Klocke, Michael. “Community shifts in a well-operating agricultural biogas plant: how process variations are handled by the microbiome”. Applied Microbiology and Biotechnology 99.18 (2015): 7791-7803.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911748Krahn, Thomas, Wibberg, Daniel, Maus, Irena, Winkler, Anika, Pühler, Alfred, Poirel, Laurent, and Schlüter, Andreas. “Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses”. Genome Announcements 3.4 (2015): e00850-15.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731076Dziewit, Lukasz, Pyzik, Adam, Szuplewska, Magdalena, Matlakowska, Renata, Mielnicki, Sebastian, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. “Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals”. Frontiers in Microbiology 6 (2015): 152.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035Arnold, Martin, Wibberg, Daniel, Blom, Jochen, Schatschneider, Sarah, Winkler, Anika, Kutter, Yvonne, Rückert, Christian, Albersmeier, Andreas, Albaum, Stefan, Goesmann, Alexander, Zange, Sabine, Heesemann, Jürgen, Pühler, Alfred, Hogardt, Michael, and Vorhölter, Frank-Jörg. “Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum”. Genome announcements 3.4 (2015): e00680-15.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2778477Dziewit, Lukasz, Czarnecki, Jakub, Prochwicz, Emilia, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. “Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686”. Frontiers in Microbiology 6 (2015): 852.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901297
Wibberg, Daniel, Rupp, Oliver, Blom, Jochen, Jelonek, Lukas, Kröber, Magdalena, Verwaaijen, Bart, Goesmann, Alexander, Albaum, Stefan, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates”. Plos One 10.12 (2015): e0144769.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2785064
Krahn, Thomas, Wibberg, Daniel, Maus, Irena, Winkler, Anika, Nordmann, Patrice, Pühler, Alfred, Poirel, Laurent, and Schlüter, Andreas. “Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1”. Genome Announcements 3.5 (2015): e01008-15.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2768627
Eikmeyer, Felix Gregor, Heinl, Stefan, Marx, Hans, Pühler, Alfred, Grabherr, Reingard, and Schlüter, Andreas. “Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing”. PLoS ONE 10.7 (2015): e0134149.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722382
Stolze, Yvonne, Zakrzewski, Martha, Maus, Irena, Eikmeyer, Felix Gregor, Jaenicke, Sebastian, Rottmann, Nils, Siebner, Clemens, Pühler, Alfred, and Schlüter, Andreas. “Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions”. Biotechnology for Biofuels 8.1 (2015): 14.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605Rupp, Oliver, Brinkrolf, Karina, Buerth, Christoph, Kunigo, Maya, Schneider, Jessica, Jaenicke, Sebastian, Goesmann, Alexander, Pühler, Alfred, Jaeger, Karl-Erich, and Ernst, Joachim F. “The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms”. Journal of Biotechnology 211 (2015): 20-30.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758144Wibberg, Daniel, Rupp, Oliver, Jelonek, Lukas, Kröber, Magdalena, Verwaaijen, Bart, Blom, Jochen, Winkler, Anika, Goesmann, Alexander, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system”. Journal of Biotechnology 203 (2015): 19-21.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733521Stoeveken, J., Singh, R., Kolkenbrock, S., Zakrzewski, Martha, Wibberg, Daniel, Eikmeyer, Felix Gregor, Pühler, Alfred, Schlüter, Andreas, and Moerschbacher, B. M. “Successful heterologous expression of a novel chitinase identified by sequence analyses of the metagenome from a chitin-enriched soil sample”. Journal of Biotechnology 201 (2015): 60-68.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717648Hahnke, Sarah, Maus, Irena, Wibberg, Daniel, Geizecler, Tomazetto, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor”. Journal of Biotechnology 193 (2015): 34-36.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709783Ortseifen, Vera, Winkler, Anika, Albersmeier, Andreas, Wendler, Sergej, Pühler, Alfred, Kalinowski, Jörn, and Rückert, Christian. “Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid”. Journal of Biotechnology 194 (2015): 81-83.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764307Wendler, Sergej, Otto, Andreas, Ortseifen, Vera, Bonn, Florian, Neshat, Armin, Schneiker-Bekel, Susanne, Walter, Frederik, Wolf, Timo, Zemke, Till, Wehmeier, Udo F., Hecker, Michael, Kalinowski, Jörn, Becher, Doerte, and Pühler, Alfred. “Comprehensive proteome analysis of Actinoplanes sp SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster”. Journal of Proteomics 125 (2015): 1-16.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758122Wibberg, Daniel, Alkhateeb, Rabeaa, Winkler, Anika, Albersmeier, Andreas, Schatschneider, Sarah, Albaum, Stefan, Niehaus, Karsten, Hublik, Gerd, Pühler, Alfred, and Vorhölter, Frank-Jörg. “Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951)”. Journal of Biotechnology 204 (2015): 45-46.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758134Maus, Irena, Cibis, Katharina Gabriela, Wibberg, Daniel, Winkler, Anika, Stolze, Yvonne, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. “Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant”. Journal of Biotechnology 203 (2015): 17-18.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733509Maus, Irena, Wibberg, Daniel, Stantscheff, Robbin, Stolze, Yvonne, Blom, Jochen, Eikmeyer, Felix Gregor, Fracowiak, Jochen, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. “Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants”. Journal of Biotechnology 201 (2015): 43-53.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719679Vinardell, JM, Acosta-Jurado, S, Göttfert, M, Zehner, S, Becker, A, Baena-Ropero, I, Blom, J, Crespo-Rivas, JC, Goesmann, A, Jaenicke, Sebastian, Krol, E, McIntosh, M, Margaret, I, Pérez-Montaño, F, Schneiker-Bekel, Susanne, Serrania, J, Szczepanowski, R, Buendia-Claveria, AM, Lloret, J, Bonilla, I, Pühler, Alfred, Ruiz-Sainz, JE, and Weidner, Stefan. “The Sinorhizobium fredii HH103 genome: a comparative analysis with S. fredii strains differing in their symbiotic behaviour with soybean”. Molecular Plant-Microbe Interactions 28.7 (2015): 811-824.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901214Koeck, Daniela E., Maus, Irena, Wibberg, Daniel, Winkler, Anika, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. “Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor”. Journal of Biotechnology 214 (2015): 59-60.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2710114Townsend, Philip D, Jungwirth, Britta, Pojer, Florence, Bußmann, Michael, Money, Victoria A, Cole, Stewart T, Pühler, Alfred, Tauch, Andreas, Bott, Michael, Cann, Martin J, and Pohl, Ehmke. “The Crystal Structures of Apo and cAMP-Bound GlxR from Corynebacterium glutamicum Reveal Structural and Dynamic Changes upon cAMP Binding in CRP/FNR Family Transcription Factors”. PloS one 9.12 (2014): e113265.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2651944Tielen, Petra, Wibberg, Daniel, Blom, Jochen, Rosin, Nathalie, Meyer, Ann-Kathrin, Bunk, Boyke, Schobert, Max, Tüpker, Reinhilde, Schatschneider, Sarah, Rückert, Christian, Albersmeier, Andreas, Goesmann, Alexander, Vorhölter, Frank-Jörg, Jahn, Dieter, and Pühler, Alfred. “Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection”. Genome announcements 2.1 (2014).PUB | DOI | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2658490Dziewit, Lukasz, Czarnecki, Jakub, Wibberg, Daniel, Radlinska, Monika, Mrozek, Paulina, Szymczak, Michal, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. “Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids”. BMC Genomics 15.1 (2014): 124.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678800
Kröber, Magdalena, Wibberg, Daniel, Grosch, Rita, Eikmeyer, Felix Gregor, Verwaaijen, Bart, Chowdhury, Soumitra P., Hartmann, Anton, Pühler, Alfred, and Schlüter, Andreas. “Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing”. Frontiers in Microbiology 5 (2014): 252.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672926
Wibberg, Daniel, Tielen, Petra, Blom, Jochen, Rosin, Nathalie, Schobert, Max, Tüpker, Reinhilde, Schatschneider, Sarah, Spilker, Dominik, Albersmeier, Andreas, Goesmann, Alexander, Vorhölter, Frank-Jörg, Pühler, Alfred, and Jahn, Dieter. “Genome Sequence of the Acute Urethral Catheter Isolate Pseudomonas aeruginosa MH38”. Genome announcements 2.2 (2014): e00161-14.PUB | PDF | DOI | PubMed | Europe PMC
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2014 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2694187Brinkrolf, Karina, Hoffrogge, Raimund, Hackl, Matthias, Tauch, Andreas, Baumann, Martina, Noll, Thomas, Goesmann, Alexander, Pühler, Alfred, and Borth, Nicole. “Functional -Omics for Cell Lines and Processes - The -Omics Technologies on the Example of CHO Cells”. Animal Cell Biotechnology In Biologics Production. Ed. Hansjörg Hauser and Roland Wagner. Berlin, Germany: Walter de Gruyter, 2014. 702.PUB
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717549Geizecler, Tomazetto, Hahnke, Sarah, Maus, Irena, Wibberg, Daniel, Pühler, Alfred, Schlüter, Andreas, and Klocke, Michael. “Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation”. Journal of Biotechnology 192 (2014): 59-61.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038Schwientek, Patrick, Neshat, Armin, Kalinowski, Jörn, Klein, Andreas, Rückert, Christian, Schneiker-Bekel, Susanne, Wendler, Sergej, Stoye, Jens, and Pühler, Alfred. “Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts”. Journal of Biotechnology 190 (2014): 85-95.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988Jakobi, Tobias, Brinkrolf, Karina, Tauch, Andreas, Noll, Thomas, Stoye, Jens, Pühler, Alfred, and Goesmann, Alexander. “Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing”. Journal of Biotechnology 190 (2014): 64-75.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552Becker, Jennifer, Timmermann, Christina, Rupp, Oliver, Albaum, Stefan, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Tauch, Andreas, and Noll, Thomas. “Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)”. Journal of biotechnology 178 (2014): 23-31.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2701280Noll, Thomas, Pühler, Alfred, Weisshaar, Bernd, and Wendisch, Volker F. “The Genomics Revolution and its Impact on Future Biotechnology”. Journal of Biotechnology 190 (2014): 1.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699819Schatschneider, Sarah, Huber, Claudia, Neuweger, Heiko, Watt, Tony, Pühler, Alfred, Eisenreich, Wolfgang, Wittmann, Christoph, Niehaus, Karsten, and Vorhölter, Frank-Jörg. “Metabolic flux pattern of glucose utilization by Xanthomonas campestris pv. campestris: prevalent role of the Entner-Doudoroff pathway and minor fluxes through the pentose phosphate pathway and glycolysis”. Molecular BioSystems 10.10 (2014): 2663-2676.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656773Rupp, Oliver, Becker, Jennifer, Brinkrolf, Karina, Timmermann, Christina, Borth, Nicole, Pühler, Alfred, Noll, Thomas, and Goesmann, Alexander. “Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines”. PLoS ONE 9.1 (2014): e85568.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694915Hahnke, Sarah, Wibberg, Daniel, Geizecler, Tomazetto, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw”. Journal of Biotechnology 184 (2014): 199-200.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693310Wibberg, Daniel, Jelonek, Lukas, Rupp, Oliver, Kröber, Magdalena, Goesmann, Alexander, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs)”. Fungal Biology 118.9-10 (2014): 800-813.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2664976Rückert, Christian, Szczepanowski, Rafael, Albersmeier, Andreas, Goesmann, Alexander, Fischer, Nicole, Steinkämper, Anne, Pühler, Alfred, Biener, Richard, Schwartz, Dirk, and Kalinowski, Jörn. “Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin”. Journal of biotechnology 178 (2014): 41-42.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685861Torres Tejerizo, Gonzalo, Pistorio, Mariano, Althabegoiti, Maria J., Cervantes, Laura, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, Lagares, Antonio, Romero, David, and Brom, Susana. “Rhizobial plasmid pLPU83a is able to switch between different transfer machineries depending on its genomic background”. FEMS Microbiology Ecology 88.3 (2014): 565-578.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2675608Wibberg, Daniel, Torres Tejerizo, Gonzalo, Florencia Del Papa, Maria, Martini, Carla, Pühler, Alfred, Lagares, Antonio, Schlüter, Andreas, and Pistorio, Mariano. “Genome sequence of the acid-tolerant strain Rhizobium sp LPU83”. Journal of Biotechnology 176 (2014): 40-41.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717539Maus, Irena, Stantscheff, Robbin, Wibberg, Daniel, Stolze, Yvonne, Winkler, Anika, Pühler, Alfred, König, Helmut, and Schlüter, Andreas. “Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT”. Journal of Biotechnology 192 (2014): 40-41.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717558Koeck, Daniela E., Wibberg, Daniel, Maus, Irena, Winkler, Anika, Albersmeier, Andreas, Zverlov, Vladimir V., Pühler, Alfred, Schwarz, Wolfgang H., Liebl, Wolfgang, and Schlüter, Andreas. “First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant”. Journal of Biotechnology 192 (2014): 154-155.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2710431Wendler, Sergej, Ortseifen, Vera, Persicke, Marcus, Klein, Andreas, Neshat, Armin, Niehaus, Karsten, Schneiker-Bekel, Susanne, Walter, Frederik, Wehmeier, Udo F., Kalinowski, Jörn, and Pühler, Alfred. “Carbon source dependent biosynthesis of acarviose metabolites in Actinoplanes sp SE50/110”. Journal of Biotechnology 191 (2014): 113-120.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2707731Koeck, Daniela E., Wibberg, Daniel, Maus, Irena, Winkler, Anika, Albersmeier, Andreas, Zverlov, Vladimir V., Liebl, Wolfgang, Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. “Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant”. Journal of Biotechnology 188 (2014): 136-137.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676049Schlüter, Andreas, Nordmann, Patrice, Bonnin, Rémy A., Millemann, Yves, Eikmeyer, Felix Gregor, Wibberg, Daniel, Pühler, Alfred, and Poirel, Laurent. “IncH-type plasmid harboring the blaCTX-M-15, blaDHA-1, and qnrB4 genes recovered from animal isolates”. Antimicrobial Agents and Chemotherapy 58.7 (2014): 3768-3773.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055Wibberg, Daniel, Luque-Almagro, Víctor M., Igeño, M. Isabel, Bremges, Andreas, Roldán, M. Dolores, Merchán, Faustino, Sáez, Lara P., Guijo, M. Isabel, Manso, M. Isabel, Macías, Daniel, Cabello, Purificación, Becerra, Gracia, Ibáñez, M. Isabel, Carmona, M. Isabel, Escribano, M. Paz, Castillo, Francisco, Sczyrba, Alexander, Moreno-Vivián, Conrado, Blasco, Rafael, Pühler, Alfred, and Schlüter, Andreas. “Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344”. Journal of biotechnology 175 (2014): 67-68.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557779Weidner, Stefan, Baumgarth, Birgit, Göttfert, Michael, Jaenicke, Sebastian, Pühler, Alfred, Schneiker-Bekel, Susanne, Serrania, Javier, Szczepanowski, Rafael, and Becker, Anke. “Genome Sequence of Sinorhizobium meliloti Rm41”. Genome Announcements 1.1 (2013): e00013-12.PUB | DOI | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605193
Eikmeyer, Felix Gregor, Rademacher, Antje, Hanreich, Angelika, Hennig, Magdalena, Jaenicke, Sebastian, Maus, Irena, Wibberg, Daniel, Zakrzewski, Martha, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms”. Biotechnology for Biofuels 6.1 (2013): 49.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631969
Mentz, Almut, Neshat, Armin, Pfeifer-Sancar, Katharina, Pühler, Alfred, Rückert, Christian, and Kalinowski, Jörn. “Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032”. BMC Genomics 14.1 (2013): 714.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548270Jungwirth, Britta, Sala, Claudia, Kohl, Thomas A, Uplekar, Swapna, Baumbach, Jan, Cole, Stewart T, Pühler, Alfred, and Tauch, Andreas. “High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum”. Microbiology 159.Pt_1 (2013): 12-22.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2549908Wibberg, Daniel, Jelonek, Lukas, Rupp, Oliver, Kröber, Magdalena, Eikmeyer, Felix Gregor, Goesmann, Alexander, Hartmann, Anton, Borriss, Rainer, Grosch, Rita, Pühler, Alfred, and Schlüter, Andreas. “Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14”. Journal of Biotechnology 167.2 (2013): 142-155.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633427Wibberg, Daniel, Blom, Jochen, Rückert, Christian, Winkler, Anika, Albersmeier, Andreas, Pühler, Alfred, Schlüter, Andreas, and Scharf, Birgit E. “Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis”. Journal of Biotechnology 168.4 (2013): 731-733.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2632946Köhler, Kirsten A. K., Rückert, Christian, Schatschneider, Sarah, Vorhölter, Frank-Jörg, Szczepanowski, Rafael, Blank, Lars M., Niehaus, Karsten, Goesmann, Alexander, Pühler, Alfred, Kalinowski, Jörn, and Schmid, Andreas. “Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil”. Journal of Biotechnology 168.4 (2013): 729-730.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2614906Wendler, Sergej, Hürtgen, Daniel, Kalinowski, Jörn, Klein, Andreas, Niehaus, Karsten, Schulte, Fabian, Schwientek, Patrick, Wehlmann, Hermann, Wehmeier, Udo F., and Pühler, Alfred. “The cytosolic and extracellular proteomes of Actinoplanes sp. SE50/110 led to the identification of gene products involved in acarbose metabolism”. Journal of Biotechnology 167.2 (2013): 178-189.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581Brinkrolf, Karina, Rupp, Oliver, Laux, Holger, Kollin, Florian, Ernst, Wolfgang, Linke, Burkhard, Kofler, Rudolf, Romand, Sandrine, Hesse, Friedemann, Budach, Wolfgang E, Galosy, Sybille, Müller, Dethardt, Noll, Thomas, Wienberg, Johannes, Jostock, Thomas, Leonard, Mark, Grillari, Johannes, Tauch, Andreas, Goesmann, Alexander, Helk, Bernhard, Mott, John E, Pühler, Alfred, and Borth, Nicole. “Chinese hamster genome sequenced from sorted chromosomes”. Nature Biotechnology 31.8 (2013): 694-695.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645247Maus, Irena, Wibberg, Daniel, Stantscheff, Robbin, Cibis, Katharina, Eikmeyer, Felix Gregor, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. “Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp Mb1 isolated from a production-scale biogas plant”. Journal of Biotechnology 168.4 (2013): 734-736.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605230Hanreich, Angelika, Schimpf, Ulrike, Zakrzewski, Martha, Schlüter, Andreas, Benndorf, Dirk, Heyer, Robert, Rapp, Erdmann, Pühler, Alfred, Reichl, Udo, and Klocke, Michael. “Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation”. Systematic and Applied Microbiology 36.5 (2013): 330-338.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2565642Dagan, Tal, Roettger, Mayo, Stucken, Karina, Landan, Giddy, Koch, Robin, Major, Peter, Gould, Sven B., Goremykin, Vadim V., Rippka, Rosmarie, de Marsac, Nicole Tandeau, Gugger, Muriel, Lockhart, Peter J., Allen, John F., Brune, Iris, Maus, Irena, Pühler, Alfred, and Martin, William F. “Genomes of Stigonematalean Cyanobacteria (Subsection V) and the Evolution of Oxygenic Photosynthesis from Prokaryotes to Plastids”. Genome Biology And Evolution 5.1 (2013): 31-44.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605244Schatschneider, Sarah, Persicke, Marcus, Watt, Tony, Hublik, Gerd, Pühler, Alfred, Niehaus, Karsten, and Vorhölter, Frank-Jörg. “Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100”. Journal of Biotechnology 167.2 (2013): 123-134.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631956Rückert, Christian, Szczepanowski, Rafael, Albersmeier, Andreas, Goesmann, Alexander, Iftime, Dumitrita, Musiol, Ewa Maria, Blin, Kai, Wohlleben, Wolfgang, Pühler, Alfred, Kalinowski, Jörn, and Weber, Tilmann. “Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids”. Journal of Biotechnology 168.4 (2013): 739-740.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635526Koeck, Daniela E., Wibberg, Daniel, Koellmeier, Tanja, Blom, Jochen, Jaenicke, Sebastian, Winkler, Anika, Albersmeier, Andreas, Zverlov, Vladimir V., Pühler, Alfred, Schwarz, Wolfgang H., and Schlüter, Andreas. “Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation”. Journal of Biotechnology 168.1 (2013): 62-63.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557080Bonnin, R. A., Poirel, L., Nordmann, P., Eikmeyer, Felix Gregor, Wibberg, Daniel, Pühler, Alfred, and Schlüter, Andreas. “Complete sequence of broad-host-range plasmid pNOR-2000 harbouring the metallo-beta-lactamase gene blaVIM-2 from Pseudomonas aeruginosa”. Journal of Antimicrobial Chemotherapy 68.5 (2013): 1060-1065.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2614207Eikmeyer, Felix Gregor, Köfinger, Petra, Poschenel, Andrea, Jünemann, Sebastian, Zakrzewski, Martha, Heinl, Stefan, Mayrhuber, Elisabeth, Grabherr, Reingard, Pühler, Alfred, Schwab, Helmut, and Schlüter, Andreas. “Metagenome analyses reveal the influence of the inoculant Lactobacillus buchneri CD034 on the microbial community involved in grass silaging”. Journal of Biotechnology 167.3 (2013): 334-343.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2547769Marc-Denis Weitze, Alfred Pühler, Wolfgang M. Heckl, Wolfgang Müller-Röber, Ortwin Renn, Peter Weingart, and Günther Wess, eds. Biotechnologie-Kommunikation. Kontroversen, Analysen, Aktivitäten. Berlin, Heidelberg: Springer Vieweg, 2013. acatech DISKUSSION.PUB | DOI | Download (ext.)
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548236Schwientek, Patrick, Wendler, Sergej, Neshat, Armin, Eirich, Christina, Rückert, Christian, Klein, Andreas, Wehmeier, Udo F, Kalinowski, Jörn, Stoye, Jens, and Pühler, Alfred. “Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media”. Journal of Biotechnology 167.2 (2013): 166-177.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286Luque-Almagro, Víctor M, Acera, Felipe, Igeño, Ma Isabel, Wibberg, Daniel, Roldán, Ma Dolores, Sáez, Lara P, Hennig, Magdalena, Quesada, Alberto, Huertas, Ma José, Blom, Jochen, Merchán, Faustino, Escribano, Ma Paz, Jaenicke, Sebastian, Estepa, Jessica, Guijo, Ma Isabel, Martínez-Luque, Manuel, Macías, Daniel, Szczepanowski, Rafael, Becerra, Gracia, Ramirez, Silvia, Carmona, Ma Isabel, Gutiérrez, Oscar, Manso, Isabel, Pühler, Alfred, Castillo, Francisco, Moreno-Vivián, Conrado, Schlüter, Andreas, and Blasco, Rafael. “Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344”. Environmental Microbiology 15.1 (2013): 253-270.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2555355Plassmeier, Jens, Busche, Tobias, Molck, Stella, Persicke, Marcus, Pühler, Alfred, Rückert, Christian, and Kalinowski, Jörn. “A propionate-inducible expression system based on the Corynebacterium glutamicum prpD2 promoter and PrpR activator and its application for the redirection of amino acid biosynthesis pathways”. Journal of Biotechnology 163.2 (2013): 225-232.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2546244Wibberg, Daniel, Szczepanowski, Rafael, Eikmeyer, Felix Gregor, Pühler, Alfred, and Schlüter, Andreas. “The IncF plasmid pRSB225 isolated from a municipal wastewater treatment plant’s on-site preflooder combining antibiotic resistance and putative virulence functions is highly related to virulence plasmids identified in pathogenic E. coli isolates”. Plasmid 69.2 (2013): 127-137.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202Zakrzewski, Martha, Bekel, Thomas, Ander, Christina, Pühler, Alfred, Rupp, Oliver, Stoye, Jens, Schlüter, Andreas, and Goesmann, Alexander. “MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets”. Journal of Biotechnology 167.2 (2013): 156-165.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500966Hain, Torsten, Ghai, Rohit, Billion, Andre, Kuenne, Carsten Tobias, Steinweg, Christiane, Izar, Benjamin, Mohamed, Walid, Mraheil, Mobarak, Domann, Eugen, Schaffrath, Silke, Kärst, Uwe, Goesmann, Alexander, Oehm, Sebastian, Pühler, Alfred, Merkl, Rainer, Vorwerk, Sonja, Glaser, Philippe, Garrido, Patricia, Rusniok, Christophe, Buchrieser, Carmen, Goebel, Werner, and Chakraborty, Trinad. “Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes”. BMC Genomics 13.1 (2012): 144.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2486060
Schwientek, Patrick, Szczepanowski, Rafael, Rückert, Christian, Kalinowski, Jörn, Klein, Andreas, Selber, Klaus, Wehmeier, Udo F., Stoye, Jens, and Pühler, Alfred. “The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110”. BMC Genomics 13.1 (2012): 112.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553286Jungbauer, Alois, Scheper, Thomas, and Pühler, Alfred. “Current research and future perspectives of applied biotechnology”. Journal of Biotechnology 162.4 (2012): 355.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2473849Weidner, Stefan, Becker, A., Bonilla, I., Jaenicke, Sebastian, Lloret, J., Margaret, I., Pühler, Alfred, Ruiz-Sainz, J. E., Schneiker-Bekel, Susanne, Szczepanowski, R., Vinardell, J. M., Zehner, S., and Göttfert, M. “Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103”. Journal of Bacteriology 194.6 (2012): 1617-1618.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618Zakrzewski, Martha, Goesmann, Alexander, Jaenicke, Sebastian, Jünemann, Sebastian, Eikmeyer, Felix Gregor, Szczepanowski, Rafael, Al-Soud, Waleed Abu, Sørensen, Søren, Pühler, Alfred, and Schlüter, Andreas. “Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing”. Journal of Biotechnology 158.4 (2012): 248-258.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2537690
Vorhölter, Frank-Jörg, Wiggerich, Heinrich-Günter, Scheidle, Heiko, Sidhu, Vishaldeep Kaur, Mrozek, Kalina, Küster, Helge, Pühler, Alfred, and Niehaus, Karsten. “Involvement of bacterial TonB-dependent signaling in the generation of an oligogalacturonide damage-associated molecular pattern from plant cell walls exposed to Xanthomonas campestris pv. campestris pectate lyases”. BMC Microbiology 12.1 (2012): 239.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472279Eikmeyer, Felix Gregor, Hadiati, Atika, Szczepanowski, Rafael, Wibberg, Daniel, Schneiker-Bekel, Susanne, Rogers, Linda M., Brown, Celeste B., Top, Eva M., Pühler, Alfred, and Schlüter, Andreas. “The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution”. Plasmid 68.1 (2012): 13-24.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535Heinl, Stefan, Wibberg, Daniel, Eikmeyer, Felix Gregor, Szczepanowski, Rafael, Blom, Jochen, Linke, Burkhard, Goesmann, Alexander, Grabherr, Reingard, Schwab, Helmut, Pühler, Alfred, and Schlüter, Andreas. “Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage”. Journal of Biotechnology 161.2 (2012): 153-166.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471681Rademacher, Antje, Zakrzewski, Martha, Schlüter, Andreas, Schonberg, Mandy, Szczepanowski, Rafael, Goesmann, Alexander, Pühler, Alfred, and Klocke, Michael. “Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing”. FEMS Microbiology Ecology 79.3 (2012): 785-799.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501307Pietruszka, Joerg, Pühler, Alfred, and Schembecker, Gerhard. “Research on industrial biotechnology within the CLIB-Graduate Cluster - Part I”. Journal of Biotechnology 159.3 (2012): 121-122.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501364Meleady, Paula, Hoffrogge, Raimund, Henry, Michael, Rupp, Oliver, Bort, Juan Hernandez, Clarke, Colin, Brinkrolf, Karina, Kelly, Shane, Müller, Benjamin, Doolan, Padraig, Hackl, Matthias, Beckmann, Tim, Noll, Thomas, Grillari, Johannes, Barron, Niall, Pühler, Alfred, Clynes, Martin, and Borth, Nicole. “Utilization and evaluation of CHO-specific sequence databases for mass spectrometry based proteomics”. Biotechnology and Bioengineering 109.6 (2012): 1386-1394.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2478526Hackl, Matthias, Jadhav, Vaibhav, Jakobi, Tobias, Rupp, Oliver, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Noll, Thomas, Borth, Nicole, and Grillari, Johannes. “Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines”. Journal of Biotechnology 158.3 (2012): 151-155.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774Schneider, Jessica, Andrea, Heiko, Blom, Jochen, Jaenicke, Sebastian, Rückert, Christian, Schorsch, Christoph, Szczepanowski, Rafael, Farwick, Mike, Goesmann, Alexander, Pühler, Alfred, Schaffer, Steffen, Tauch, Andreas, Köhler, Tim, and Brinkrolf, Karina. “Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10”. Eukaryotic Cell 11.12 (2012): 1582-1583.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526269
Strobel, Tina, Al-Dilaimi, Arwa, Blom, Jochen, Gessner, Arne, Kalinowski, Jörn, Luzhetska, Marta, Pühler, Alfred, Szczepanowski, Rafael, Bechthold, Andreas, and Rückert, Christian. “Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae”. BMC Genomics 13.1 (2012): 465.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529610Schork, Sabine, Schlüter, Andreas, Blom, Jochen, Schneiker-Bekel, Susanne, Pühler, Alfred, Goesmann, Alexander, Frosch, Matthias, and Schoen, Christoph. “Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198”. Journal of Bacteriology 194.18 (2012): 5144-5145.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298Maus, Irena, Wibberg, Daniel, Stantscheff, R., Eikmeyer, Felix Gregor, Seffner, A., Boelter, J., Szczepanowski, Rafael, Blom, Jochen, Jaenicke, Sebastian, König, H., Pühler, Alfred, and Schlüter, Andreas. “Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester”. Journal of Bacteriology 194.19 (2012): 5487-5488.PUB | DOI | WoS | PubMed | Europe PMC
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513297Pauling, Josch, Rottger, Richard, Neuner, Andreas, Salgado, Heladia, Collado-Vides, Julio, Kalaghatgi, Prabhav, Azevedo, Vasco, Tauch, Andreas, Pühler, Alfred, and Baumbach, Jan. “On the trail of EHEC/EAEC-unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria”. Integrative Biology 4.7 (2012): 728-733.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Sonderausgabe Zeitschrift | Veröffentlicht | PUB-ID: 2326436Alfred Pühler and Werner Selbitschka, eds. “New Frontiers in Microbial Genome Research”. Journal of Biotechnology 155.1 (2011): 1-2.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768Becker, Jennifer, Timmermann, Christina, Jakobi, Tobias, Rupp, Oliver, Szczepanowski, Rafael, Hackl, Matthias, Goesmann, Alexander, Tauch, Andreas, Borth, Nicole, Grillari, Johannes, Pühler, Alfred, Noll, Thomas, and Brinkrolf, Karina. “Next-generation sequencing of the CHO cell transcriptome”. BMC Proceedings 5.Suppl. 8 (2011): P6.PUB | DOI
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276Jaenicke, Sebastian, Ander, Christina, Bekel, Thomas, Bisdorf, Regina, Dröge, Marcus, Gartemann, Karl-Heinz, Jünemann, Sebastian, Kaiser, Olaf, Krause, Lutz, Tille, Felix, Zakrzewski, Martha, Pühler, Alfred, Schlüter, Andreas, and Goesmann, Alexander. “Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing”. PLoS ONE 6.1 (2011): e14519.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317680Zhou, Lian, Vorhölter, Frank-Jörg, He, Yong-Qiang, Jiang, Bo-Le, Tang, Ji-Liang, Xu, Yuquan, Pühler, Alfred, and He, Ya-Wen. “Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris”. BMC Genomics 12.1 (2011): 359.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944855Persicke, Marcus, Plassmeier, Jens, Neuweger, Heiko, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. “Erratum to “Size exclusion chromatography—An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites” [J. Biotechnol. 154 (2–3) (2011) 171–178]”. Journal of Biotechnology 155.2 (2011): 266-267.PUB | DOI | WoS
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354746Schwientek, Patrick, Szczepanowski, Rafael, Rückert, Christian, Stoye, Jens, and Pühler, Alfred. “Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology”. Journal of Biotechnology 155.1 (2011): 68-77.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | PUB-ID: 2401477Mattiasson, Bo, and Pühler, Alfred. “Towards sustainable biotechnology”. Journal of Biotechnology 152.4 (2011): 113.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375634Pothier, Joël F., Vorhölter, Frank-Jörg, Blom, Jochen, Goesmann, Alexander, Pühler, Alfred, Smits, TH, and Duffy, B. “The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis”. FEMS Microbiology Letters 323.1 (2011): 52-60.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731Wibberg, Daniel, Blom, Jochen, Jaenicke, Sebastian, Kollin, Florian, Rupp, Oliver, Scharf, Birgit, Schneiker-Bekel, Susanne, Szczepanowski, Rafael, Goesmann, Alexander, Setubal, Joao Carlos, Schmitt, Rüdiger, Pühler, Alfred, and Schlüter, Andreas. “Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid”. Journal of Biotechnology 155.1 (2011): 50-62.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371Küberl, Andreas, Schneider, Jessica, Thallinger, Gerhard G., Anderl, Ingund, Wibberg, Daniel, Hajek, Tanja, Jaenicke, Sebastian, Brinkrolf, Karina, Goesmann, Alexander, Szczepanowski, Rafael, Pühler, Alfred, Schwab, Helmut, Glieder, Anton, and Pichler, Harald. “High-quality genome sequence of Pichia pastoris CBS7435”. Journal of Biotechnology 154.4 (2011): 312-320.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576Becker, Jennifer, Hackel, M, Jakobi, Tobias, Rupp, Oliver, Schneider, Jessica, Szczepanowski, Rafael, Bekel, Thomas, Borth, N, Goesmann, Alexander, Grillari, J, Kaltschmidt, Christian, Noll, Thomas, Pühler, Alfred, Tauch, Andreas, and Brinkrolf, Karina. “Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing”. Journal of Biotechnology 156.3 (2011): 227-235.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289494Persicke, Marcus, Plassmeier, Jens, Neuweger, Heiko, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. “Size exclusion chromatography-An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites”. Journal of Biotechnology 154.2-3 (2011): 171-178.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375954Borriss, Rainer, Chen, Xiao-Hua, Rückert, Christian, Blom, Jochen, Becker, Anke, Baumgarth, Birgit, Fan, Ben, Pukall, Rudiger, Schumann, Peter, Sproer, Cathrin, Junge, Helmut, Vater, Joachim, Pühler, Alfred, and Klenk, Hans-Peter. “Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons”. Int J Syst Evol Microbiol 61.8 (2011): 1786-1801.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326481Mayer, Lauri, Vendruscolo, Claire Tondo, da Silva, Wladimir Padilha, Vorhölter, Frank-Jörg, Becker, Anke, and Pühler, Alfred. “Insights into the genome of the xanthan-producing phytopathogen Xanthomonas arboricola pv. pruni 109 by comparative genomic hybridization”. Journal of Biotechnology 155.1 (2011): 40-49.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2404808Plassmeier, Jens, Persicke, Marcus, Pühler, Alfred, Sterthoff, Charlott, Rückert, Christian, and Kalinowski, Jörn. “Molecular characterization of PrpR, the transcriptional activator of propionate catabolism in Corynebacterium glutamicum”. Journal of Biotechnology 159.1-2 (2011): 1-11.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2404874Schatschneider, Sarah, Vorhölter, Frank-Jörg, Rückert, Christian, Becker, Anke, Eisenreich, Wolfgang, Pühler, Alfred, and Niehaus, Karsten. “Genome-enabled determination of amino acid biosynthesis in Xanthomonas campestris pv. campestris and identification of biosynthetic pathways for alanine, glycine, and isoleucine by 13C-isotopologue profiling”. Molecular Genetics and Genomics 286.3-4 (2011): 247-259.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751Jaenicke, Sebastian, Zakrzewski, Martha, Jünemann, Sebastian, Pühler, Alfred, Goesmann, Alexander, and Schlüter, Andreas. “Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods”. Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. Ed. Frans J. de Bruijn. Hoboken, NJ, USA: Wiley-Blackwell, 2011. 403-414.PUB | DOI
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2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892Schneiker-Bekel, Susanne, Wibberg, Daniel, Bekel, Thomas, Blom, Jochen, Linke, Burkhard, Neuweger, Heiko, Stiens, Michael, Vorhölter, Frank-Jörg, Weidner, Stefan, Goesmann, Alexander, Pühler, Alfred, and Schlüter, Andreas. “The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome”. Journal of Biotechnology 155.1 (In Press): 20-33.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955Hackl, Matthias, Jakobi, Tobias, Blom, Jochen, Doppmeier, Daniel, Brinkrolf, Karina, Szczepanowski, Rafael, Bernhart, Stephan H, Höner zu Siederdissen, Christian, Bort, Juan A Hernandez, Wieser, Matthias, Kunert, Renate, Jeffs, Simon, Hofacker, Ivo L., Goesmann, Alexander, Pühler, Alfred, Borth, Nicole, and Grillari, Johannes. “Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering”. Journal of Biotechnology 153.1-2 (2011): 62-75.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968039Torres Tejerizo, Gonzalo, Florencia Del Papa, Maria, Eugenia Soria-Diaz, M., Draghi, Walter, Lozano, Mauricio, de los Angeles Giusti, Maria, Manyani, Hamid, Megias, Manuel, Gil Serrano, Antonio, Pühler, Alfred, Niehaus, Karsten, Lagares, Antonio, and Pistorio, Mariano. “The Nodulation of Alfalfa by the Acid-Tolerant Rhizobium sp. Strain LPU83 Does Not Require Sulfated Forms of Lipochitooligosaccharide Nodulation Signals”. Journal of Bacteriology 193.1 (2011): 30-39.PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275
Trost, Eva, Götker, Susanne, Schneider, Jessica, Schneiker-Bekel, Susanne, Szczepanowski, Rafael, Tilker, Alexandra, Viehöver, Prisca, Arnold, Walter, Bekel, Thomas, Blom, Jochen, Gartemann, Karl-Heinz, Linke, Burkhard, Goesmann, Alexander, Pühler, Alfred, Shukla, Sanjay K., and Tauch, Andreas. “Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion”. BMC Genomics 11.1 (2010): 91.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588692Steinweg, Christiane, Kuenne, Carsten T., Billion, Andre, Mraheil, Mobarak A., Domann, Eugen, Ghai, Rohit, Barbuddhe, Sukhadeo B., Kaerst, Uwe, Goesmann, Alexander, Pühler, Alfred, Weisshaar, Bernd, Wehland, Juergen, Lampidis, Robert, Kreft, Juergen, Goebel, Werner, Chakraborty, Trinad, and Hain, Torsten. “Complete Genome Sequence of Listeria seeligeri, a Nonpathogenic Member of the Genus Listeria”. Journal of Bacteriology 192.5 (2010): 1473-1474.PUB | DOI | WoS | PubMed | Europe PMC
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929311Gölzhäuser, Armin, Nattkemper, Tim Wilhelm, Niehaus, Karsten, Pühler, Alfred, and Sauer, Markus. “BioImaging: Contributions from biology, physics and informatics”. Journal of Biotechnology 149.4 (2010): 227-228.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634097Strittmatter, Axel W., Liesegang, Heiko, Rabus, Ralf, Decker, Iwona, Amann, Judith, Andres, Soenke, Henne, Anke, Fricke, Wolfgang Florian, Martinez-Arias, Rosa, Bartels, Daniela, Goesmann, Alexander, Krause, Lutz, Pühler, Alfred, Klenk, Hans-Peter, Richter, Michael, Schueler, Margarete, Gloeckner, Frank Oliver, Meyerdierks, Anke, Gottschalk, Gerhard, and Amann, Rudolf. “Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide”. ENVIRONMENTAL MICROBIOLOGY 11.5 (2009): 1038-1055.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635309
Hellweg, Christoph, Pühler, Alfred, and Weidner, Stefan. “The time course of the transcriptomic response of Sinorhizobium meliloti 1021 following a shift to acidic pH”. BMC MICROBIOLOGY 9.1 (2009): 37.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783187
Blom, Jochen, Albaum, Stefan, Doppmeier, Daniel, Pühler, Alfred, Vorhölter, Frank-Jörg, Zakrzewski, Martha, and Goesmann, Alexander. “EDGAR: a software framework for the comparative analysis of prokaryotic genomes”. BMC Bioinformatics 10.1 (2009): 154.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635951Nentwich, Svenja S., Brinkrolf, Karina, Gaigalat, Lars, Hueser, Andrea T., Rey, Daniel A., Mohrbach, Tobias, Marin, Kay, Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. “Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032”. MICROBIOLOGY 155.1 (2009): 150-164.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634443Pühler, Alfred, and Selbitschka, Werner. “Functional genome research on bacteria relevant for agriculture, environment and biotechnology”. JOURNAL OF BIOTECHNOLOGY 140.1-2 (2009): 1-2.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634467Becker, Anke, Barnett, Melanie J., Capela, Delphine, Dondrup, Michael, Kamp, Paul-Bertram, Krol, Elizaveta, Linke, Burkhard, Rüberg, Silvia, Runte, Kai, Schroeder, Brenda K., Weidner, Stefan, Yurgel, Svetlana N., Batut, Jacques, Long, Sharon R., Pühler, Alfred, and Goesmann, Alexander. “A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data”. JOURNAL OF BIOTECHNOLOGY 140.1-2 (2009): 45-50.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321
Dondrup, Michael, Albaum, Stefan, Griebel, Thasso, Henckel, Kolja, Jünemann, Sebastian, Kahlke, Tim, Kleindt, Christiane Katja, Kuester, Helge, Linke, Burkhard, Mertens, Dominik, Mittard-Runte, Virginie, Neuweger, Heiko, Runte, Kai J., Tauch, Andreas, Tille, Felix, Pühler, Alfred, and Goesmann, Alexander. “EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data”. BMC Bioinformatics 10.1 (2009): 50.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591546Szczepanowski, Rafael, Linke, Burkhard, Krahn, Irene, Gartemann, Karl-Heinz, Guetzkow, Tim, Eichler, Wolfgang, Pühler, Alfred, and Schlueter, Andreas. “Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics”. MICROBIOLOGY 155.7 (2009): 2306-2319.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591844Kroeber, Magdalena, Bekel, Thomas, Diaz, Naryttza N., Goesmann, Alexander, Jaenicke, Sebastian, Krause, Lutz, Miller, Dimitri, Runte, Kai J., Viehoever, Prisca, Pühler, Alfred, and Schlueter, Andreas. “Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing”. JOURNAL OF BIOTECHNOLOGY 142.1 (2009): 38-49.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1633812Jochmann, Nina, Kurze, Anna-Katharina, Czaja, Lisa F., Brinkrolf, Karina, Brune, Iris, Hueser, Andrea T., Hansmeier, Nicole, Pühler, Alfred, Borovok, Ilya, and Tauch, Andreas. “Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays”. MICROBIOLOGY 155.5 (2009): 1459-1477.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634447Bekel, Thomas, Henckel, Kolja, Küster, Helge, Meyer, Folker, Mittard-Runte, Virginie, Neuweger, Heiko, Paarmann, Daniel, Rupp, Oliver, Zakrzewski, Martha, Pühler, Alfred, Stoye, Jens, and Goesmann, Alexander. “The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies”. Journal of Biotechnology 140.1-2 (2009): 3-12.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592345Gartemann, Karl-Heinz, Abt, Birte, Bekel, Thomas, Burger, Annette, Engemann, Jutta, Fluegel, Monika, Gaigalat, Lars, Goesmann, Alexander, Graefen, Ines, Kalinowski, Jörn, Kaup, Olaf, Kirchner, Oliver, Krause, Lutz, Linke, Burkhard, McHardy, Alice, Meyer, Folker, Pohle, Sandra, Rückert, Christian, Schneiker-Bekel, Susanne, Zellermann, Eva-Maria, Pühler, Alfred, Eichenlaub, Rudolf, Kaiser, Olaf, and Bartels, Daniela. “The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity”. JOURNAL OF BACTERIOLOGY 190.6 (2008): 2138-2149.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783292
Gross, Roy, Guzman, Carlos A., Sebaihia, Mohammed, Martins dos Santos, Vítor A. P., Pieper, Dietmar H., Koebnik, Ralf, Lechner, Melanie, Bartels, Daniela, Buhrmester, Jens, Choudhuri, Jomuna V., Ebensen, Thomas, Gaigalat, Lars, Herrmann, Stefanie, Khachane, Amit N., Larisch, Christof, Link, Stefanie, Linke, Burkhard, Meyer, Folker, Mormann, Sascha, Nakunst, Diana, Rückert, Christian, Schneiker-Bekel, Susanne, Schulze, Kai, Vorhölter, Frank-Jörg, Yevsa, Tetyana, Engle, Jacquelyn T., Goldman, William E., Pühler, Alfred, Göbel, Ulf B., Goesmann, Alexander, Blöcker, Helmut, Kaiser, Olaf, and Martinez-Arias, Rosa. “The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae”. BMC Genomics 9.1 (2008): 449.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592024Vorhölter, Frank-Jörg, Schneiker-Bekel, Susanne, Goesmann, Alexander, Krause, Lutz, Bekel, Thomas, Kaiser, Olaf, Linke, Burkhard, Patschkowski, Thomas, Rückert, Christian, Schmid, Joachim, Sidhu, Vishaldeep Kaur, Sieber, Volker, Tauch, Andreas, Watt, Steven Alexander, Weisshaar, Bernd, Becker, Anke, Niehaus, Karsten, and Pühler, Alfred. “The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis”. Journal of Biotechnology 134.1-2 (2008): 33-45.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588078Brinkrolf, Karina, Ploeger, Svenja, Solle, Sandra, Brune, Iris, Nentwich, Svenia S., Hueser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences”. MICROBIOLOGY 154.4 (2008): 1068-1081.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585980Schlueter, Andreas, Krause, Lutz, Szczepanowski, Rafael, Goesmann, Alexander, and Pühler, Alfred. “Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant”. Journal of Biotechnology 136.1-2 (2008): 65-76.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592318Meschini, Eitel Peltzer, Blanco, Flavio Antonio, Zanetti, Maria Eugenia, Beker, Maria Pia, Küster, Helge, Pühler, Alfred, and Aguilar, O. Mario. “Host genes involved in nodulation preference in common bean (Phaseolus vulgaris)-Rhizobium etli symbiosis revealed - by suppressive subtractive hybridization”. MOLECULAR PLANT-MICROBE INTERACTIONS 21.4 (2008): 459-468.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585560
Rückert, Christian, Milse, Johanna, Albersmeier, Andreas, Koch, Daniel J., Pühler, Alfred, and Kalinowski, Jörn. “The dual transcriptional regulator CysR in Corynebacterium glutamicum ATCC 13032 controls a subset of genes of the McbR regulon in response to the availability of sulphide acceptor molecules”. BMC GENOMICS 9.1 (2008): 483.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585914Pühler, Alfred, and Selbitschka, Werner. “Genome research in the light of ultrafast sequencing technologies”. JOURNAL OF BIOTECHNOLOGY 136.1-2 (2008): 1-2.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585969Szczepanowski, Rafael, Bekel, Thomas, Goesmann, Alexander, Krause, Lutz, Kroemeke, Holger, Kaiser, Olaf, Eichler, Wolfgang, Pühler, Alfred, and Schlueter, Andreas. “Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technology”. JOURNAL OF BIOTECHNOLOGY 136.1-2 (2008): 54-64.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592210Jungwirth, Britta, Emer, Denise, Brune, Iris, Hansmeier, Nicole, Pühler, Alfred, Eikmanns, Bernhard J., and Tauch, Andreas. “Triple transcriptional control of the resuscitation promoting factor 2 (rpf2) gene of Corynebacterium glutamicum by the regulators of acetate metabolism RamA and RamB and the cAMP-dependent regulator GlxR”. FEMS MICROBIOLOGY LETTERS 281.2 (2008): 190-197.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586869Serrania, Javier, Vorhölter, Frank-Jörg, Niehaus, Karsten, Pühler, Alfred, and Becker, Anke. “Identification of Xanthomonas campestris pv. campestris galactose utilization genes from transcriptome data”. Journal of Biotechnology 135.3 (2008): 309-317.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009Krause, Lutz, Diaz, Naryttza N., Edwards, Robert A., Gartemann, Karl-Heinz, Krömeke, Holger, Neuweger, Heiko, Pühler, Alfred, Runte, Kai J., Schlüter, Andreas, Stoye, Jens, Szczepanowski, Rafael, Tauch, Andreas, and Goesmann, Alexander. “Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor”. JOURNAL OF BIOTECHNOLOGY 136.1-2 (2008): 91-101.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586719Kohl, Thomas, Baumbach, Jan, Jungwirth, Britta, Pühler, Alfred, and Tauch, Andreas. “The GlxR regulon of the amino acid producer Corynebacterium glutamicum: In silico and in vitro detection of DNA binding sites of a global transcription regulator”. JOURNAL OF BIOTECHNOLOGY 135.4 (2008): 340-350.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585956Stiens, Michael, Becker, Anke, Bekel, Thomas, Gödde, Victoria, Goesmann, Alexander, Niehaus, Karsten, Schneiker-Bekel, Susanne, Selbitschka, Werner, Weidner, Stefan, Schlüter, Andreas, and Pühler, Alfred. “Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11”. Journal of Biotechnology 136.1-2 (2008): 31-37.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585987Schlüter, Andreas, Bekel, Thomas, Diaz, Naryttza N., Dondrup, Michael, Eichenlaub, Rudolf, Gartemann, Karl-Heinz, Krahn, Irene, Krause, Lutz, Kroemeke, Holger, Kruse, Olaf, Mussgnug, Jan H., Neuweger, Heiko, Niehaus, Karsten, Pühler, Alfred, Runte, Kai J., Szczepanowski, Rafael, Tauch, Andreas, Tilker, Alexandra, Viehöver, Prisca, and Goesmann, Alexander. “The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology”. Journal of Biotechnology 136.1-2 (2008): 77-90.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585918Tauch, Andreas, Trost, Eva, Tilker, Alexandra, Ludewig, Ulrike, Schneiker-Bekel, Susanne, Goesmann, Alexander, Arnold, Walter, Bekel, Thomas, Brinkrolf, Karina, Brune, Iris, Goetker, Susanne, Kalinowski, Jörn, Kamp, Paul-Bertram, Lobo, Francisco Pereira, Viehöver, Prisca, Weisshaar, Bernd, Soriano, Francisco, Droege, Marcus, and Pühler, Alfred. “The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing”. Journal of Biotechnology 136.1-2 (2008): 11-21.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585939Tauch, Andreas, Schneider, Jessica, Szczepanowski, Rafael, Tilker, Alexandra, Viehöver, Prisca, Gartemann, Karl-Heinz, Arnold, Walter, Blom, Jochen, Brinkrolf, Karina, Brune, Iris, Goetker, Susanne, Weisshaar, Bernd, Goesmann, Alexander, Droege, Marcus, and Pühler, Alfred. “Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids”. Journal of Biotechnology 136.1-2 (2008): 22-30.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631126Kuhn, Stefanie, Stiens, Michael, Pühler, Alfred, and Schlüter, Andreas. “Prevalence of pSmeSM11a-like plasmids in indigenous Sinorhizobium meliloti strains isolated in the course of a field release experiment with genetically modified S-meliloti strains”. FEMS MICROBIOLOGY ECOLOGY 63.1 (2008): 118-131.PUB | DOI | WoS | PubMed | Europe PMC
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1990198Strauch, Eckhard, Hammerl, Jens Andre, Konietzny, Antje, Schneiker-Bekel, Susanne, Arnold, Walter, Goesmann, Alexander, Pühler, Alfred, and Beutin, Lothar. “Bacteriophage 2851 is a prototype phage for dissemination of the Shiga toxin variant gene 2c in Escherichia coli O157:H7”. Infection and Immunity 76.12 (2008): 5466-5477.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593996Sewald, Norbert, and Pühler, Alfred. “Molecular systems biology”. Journal of Biotechnology 129.2 (2007): 171-172.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631327Schneiker-Bekel, Susanne, Perlova, Olena, Kaiser, Olaf, Gerth, Klaus, Alici, Aysel, Altmeyer, Matthias O., Bartels, Daniela, Bekel, Thomas, Beyer, Stefan, Bode, Edna, Bode, Helge B., Bolten, Christoph J., Choudhuri, Jomuna V., Doss, Sabrina, Elnakady, Yasser A., Frank, Bettina, Gaigalat, Lars, Goesmann, Alexander, Groeger, Carolin, Gross, Frank, Jelsbak, Lars, Jelsbak, Lotte, Kalinowski, Jörn, Kegler, Carsten, Knauber, Tina, Konietzny, Sebastian, Kopp, Maren, Krause, Lutz, Krug, Daniel, Linke, Burkhard, Mahmud, Taifo, Martinez-Arias, Rosa, McHardy, Alice C., Merai, Michelle, Meyer, Folker, Mormann, Sascha, Munoz-Dorado, Jose, Perez, Juana, Pradella, Silke, Rachid, Shwan, Raddatz, Guenter, Rosenau, Frank, Rückert, Christian, Sasse, Florenz, Scharfe, Maren, Schuster, Stephan C., Suen, Garret, Treuner-Lange, Anke, Velicer, Gregory J., Vorhölter, Frank-Jörg, Weissman, Kira J., Welch, Roy D., Wenzel, Silke C., Whitworth, David E., Wilhelm, Susanne, Wittmann, Christoph, Bloecker, Helmut, Pühler, Alfred, and Mueller, Rolf. “Complete genome sequence of the myxobacterium Sorangium cellulosum”. Nature Biotechnology 25.11 (2007): 1281-1289.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2914794Schotter, Jörg, Panhorst, Michael, Brzeska, Monika, Kamp, Paul-Bertram, Becker, Anke, Pühler, Alfred, Reiss, Günter, and Brückl, Hubert. “Molecular Detection with Magnetic Labels and Magnetoresistive Sensors”. Nanoscale Devices - Fundamentals and Applications. Ed. Rudolf Gross, Anatolie Sidorenko, and Lenar Tagirov. Dordrecht: Springer Netherlands, 2007.Vol. 233. NATO Science Series. 35-46.PUB | DOI
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783754
Neuweger, Heiko, Baumbach, Jan, Albaum, Stefan, Bekel, Thomas, Dondrup, Michael, Hüser, Andrea T., Kalinowski, Jörn, Oehm, Sebastian, Pühler, Alfred, Rahmann, Sven, Weile, Jochen, and Goesmann, Alexander. “CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data”. BMC Systems Biology 1.1 (2007): 55.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595908Szczepanowski, Rafael, Krahn, Irene, Bohn, Nadine, Pühler, Alfred, and Schlueter, Andreas. “Novel macrolide resistance module carried by the IncP-1 beta resistance plasmid pRSB111, isolated from a wastewater treatment plant”. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 51.2 (2007): 673-678.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595939Pühler, Alfred, and Strack, Dieter. “Molecular basics of mycorrhizal symbioses”. PHYTOCHEMISTRY 68.1 (2007): 6-7.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1594087Brune, Iris, Jochmann, Nina, Brinkrolf, Karina, Hueser, Andrea T., Gerstmeir, Robert, Eikmanns, Bernhard J., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “The Ic1R-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum”. JOURNAL OF BACTERIOLOGY 189.7 (2007): 2720-2733.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1594426Hansmeier, Nicole, Chao, Tzu-Chiao, Daschkey, Svenja, Muesken, Mathias, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411”. PROTEOMICS 7.7 (2007): 1076-1096.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631103Rinas, U., and Pühler, Alfred. “In memoriam: Wolf-Dieter Deckwer - Merging process engineering and systems biology”. JOURNAL OF BIOTECHNOLOGY 132.4 (2007): 341.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593538Schlüter, Andreas, Szczepanowski, Rafael, Pühler, Alfred, and Top, Eva M. “Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool”. FEMS MICROBIOLOGY REVIEWS 31.4 (2007): 449-477.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593371Nakunst, Diana, Larisch, Christof, Hueser, Andrea T., Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes”. JOURNAL OF BACTERIOLOGY 189.13 (2007): 4696-4707.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595014Schlüter, Andreas, Szczepanowski, Rafael, Kurz, N., Schneiker-Bekel, Susanne, Krahn, Irene, and Pühler, Alfred. “Erythromycin resistance-conferring plasmid pRSB105, isolated from a sewage treatment plant, harbors a new macrolide resistance determinant, an integron-containing Tn402-like element, and a large region of unknown function”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 73.6 (2007): 1952-1960.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596137Del Papa, M. F., Pistorio, M., Draghi, W. O., Lozano, M. J., Giusti, M. A., Medina, C., van Dillewijn, P., Martinez-Abarca, F., Flores, B. Moron, Ruiz-Sainz, J. E., Megias, M., Pühler, Alfred, Niehaus, Karsten, Toro, N., and Lagares, A. “Identification and characterization of a nodH ortholog from the alfalfa-nodulating Or191-like rhizobia”. Molecular Plant - Microbe Interactions 20.2 (2007): 138-145.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593746Stiens, Michael, Schneiker-Bekel, Susanne, Pühler, Alfred, and Schlüter, Andreas. “Sequence analysis of the 181-kb accessory plasmid pSmeSM11b, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experiment”. FEMS MICROBIOLOGY LETTERS 271.2 (2007): 297-309.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783345
Krause, Lutz, McHardy, Alice C., Nattkemper, Tim Wilhelm, Pühler, Alfred, Stoye, Jens, and Meyer, Folker. “GISMO - gene identification using a support vector machine for ORF classification”. Nucleic Acids Research 35.2 (2007): 540-549.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1894739Küster, Helge, Becker, Anke, Firnhaber, Christian, Hohnjec, Natalija, Manthey, Katja, Perlick, Andreas M., Bekel, Thomas, Dondrup, Michael, Henckel, Kolja, Goesmann, Alexander, Meyer, Folker, Wipf, Daniel, Requena, Natalia, Hildebrandt, Ulrich, Hampp, Rüdiger, Nehls, Uwe, Krajinski, Franziska, Franken, Philipp, and Pühler, Alfred. “Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses”. Phytochemistry 68.1 (2007): 19-32.PUB | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783727
Gaigalat, Lars, Schlüter, Jan-Philip, Hartmann, Michelle, Mormann, Sascha, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in Corynebacterium glutamicum”. BMC Molecular Biology 8.1 (2007): 104.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946125Schlüter, Andreas, Krahn, Irene, Kollin, Florian, Bonemann, Gabriele, Stiens, Michael, Szczepanowski, Rafael, Schneiker-Bekel, Susanne, and Pühler, Alfred. “IncP-1-beta plasmid pGNB1 isolated from a bacterial community from a wastewater treatment plant mediates decolorization of triphenylmethane dyes”. Appl Environ Microbiol 73.20 (2007): 6345-6350.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596976Krause, Andrea, Ramakumar, Adarsh, Bartels, Daniela, Battistoni, Federico, Bekel, Thomas, Boch, Jens, Boehm, Melanie, Friedrich, Frauke, Hurek, Thomas, Krause, Lutz, Linke, Burkhard, McHardy, Alice C., Sarkar, Abhijit, Schneiker-Bekel, Susanne, Syed, Arshad Ali, Thauer, Rudolf, Vorhölter, Frank-Jörg, Weidner, Stefan, Pühler, Alfred, Reinhold-Hurek, Barbara, Kaiser, Olaf, and Goesmann, Alexander. “Complete genome of the mutualistic, N-2-fixing grass endophyte Azoarcus sp strain BH72”. Nature Biotechnology 24.11 (2006): 1385-1391.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598182Schneiker-Bekel, Susanne, dos Santos, Vitor A. P. Martins, Bartels, Daniela, Bekel, Thomas, Brecht, Martina, Buhrmester, Jens, Chernikova, Tatyana N., Denaro, Renata, Ferrer, Manuel, Gertler, Christoph, Goesmann, Alexander, Golyshina, Olga V., Kaminski, Filip, Khachane, Amit N., Lang, Siegmund, Linke, Burkhard, McHardy, Alice C., Meyer, Folker, Nechitaylo, Taras, Pühler, Alfred, Regenhardt, Daniela, Rupp, Oliver, Sabirova, Julia S., Selbitschka, Werner, Yakimov, Michail M., Timmis, Kenneth N., Vorhölter, Frank-Jörg, Weidner, Stefan, Kaiser, Olaf, and Golyshin, Peter N. “Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis”. Nature Biotechnology 24.8 (2006): 997-1004.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946381Brune, Iris, Becker, Anke, Paarmann, Daniel, Albersmeier, Andreas, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “Under the influence of the active deodorant ingredient 4-hydroxy-3-methoxybenzyl alcohol, the skin bacterium Corynebacterium jeikeium moderately responds with differential gene expression”. J Biotechnol 127.1 (2006): 21-33.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773628
Brune, Iris, Werner, Hendrikje, Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum”. BMC Genomics 7.1 (2006): 21.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599402Hansmeier, N., Chao, T. C., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae”. PROTEOMICS 6.8 (2006): 2465-2476.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596821Selbitschka, Werner, Keller, M., Miethling-Graff, R., Dresing, U., Schwieger, F., Krahn, I., Homann, I., Dammann-Kalinowski, T., Pühler, Alfred, and Tebbe, C. C. “Long-term field release of bioluminescent Sinorhizobium meliloti strains to assess the influence of a recA mutation on the strains' survival”. MICROBIAL ECOLOGY 52.3 (2006): 583-595.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597413Gottschalk, G., Goebel, W., and Pühler, Alfred. “Aspects of prokaryotic genome research”. JOURNAL OF BIOTECHNOLOGY 126.1 (2006): 1-2.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598081Bönemann, Gabriele, Stiens, Michael, Pühler, Alfred, and Schlüter, Andreas. “Mobilizable IncQ-related plasmid carrying a new quinolone resistance gene, qnrS2, isolated from the bacterial community of a wastewater treatment plant”. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 50.9 (2006): 3075-3080.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599618Hansmeier, N, Albersmeier, Andreas, Tauch, Andreas, Damberg, T, Ros, R, Anselmetti, Dario, Pühler, Alfred, and Kalinowski, Jörn. “The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032”. Microbiology 152.4 (2006): 923-935.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600852Hansmeier, N., Chao, T. C., Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. “The cytosolic, cell surface and extracellular proteomes of the biotechnologically important soil bacterium Cornyebacterium efficiens YS-314 in comparison to those of Corynebacterium glutamicum ATCC 13032”. PROTEOMICS 6.1 (2006): 233-250.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599383Stiens, M, Schneiker-Bekel, Susanne, Keller, M, Kuhn, S, Pühler, Alfred, and Schlüter, Andreas. “Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experimerit”. Appl Environ Microbiol 72.5 (2006): 3662-3672.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1600185Gaillard, M, Vallaeys, T, Vorhölter, Frank-Jörg, Minoia, M, Werlen, C, Sentchilo, V, Pühler, Alfred, and van der Meer, JR. “The clc element of Pseudomonas sp strain B13, a genomic island with various catabolic properties”. JOURNAL OF BACTERIOLOGY 188.5 (2006): 1999-2013.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1868701Tauch, Andreas, Trost, Eva, Bekel, Thomas, Goesmann, Alexander, Ludewig, U., and Pühler, Alfred. “Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System”. Biochemica 4 (2006): 4-6.PUB
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773853
Mormann, Sascha, Lömker, Alexander, Rückert, Christian, Gaigalat, Lars, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway”. BMC Genomics 7.1 (2006): 205.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599211Mahne, M., Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “The Corynebacterium glutamicum gene pmt encoding a glycosyltransferase related to eukaryotic protein-O-mannosyltransferases is essential for glycosylation of the resuscitation promoting factor (Rpf2) and other secreted proteins”. FEMS MICROBIOLOGY LETTERS 259.2 (2006): 226-233.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597316Hain, Torsten, Steinweg, Christiane, Kuenne, Carsten Tobias, Billion, Andre, Ghai, Rohit, Chatterjee, Som Subhra, Domann, Eugen, Kaerst, Uwe, Goesmann, Alexander, Bekel, Thomas, Bartels, Daniela, Kaiser, Olaf, Meyer, Folker, Pühler, Alfred, Weisshaar, Bernd, Wehland, Juergen, Liang, Chunguang, Dandekar, Thomas, Lampidis, Robert, Kreft, Juergen, Goebel, Werner, and Chakraborty, Trinad. “Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes”. Journal of Bacteriology 188.23 (2006): 8299-8302.PUB | DOI | WoS | PubMed | Europe PMC
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631957Krause, Lutz, Diaz, Naryttza N., Bartels, Daniela, Edwards, Robert A., Pühler, Alfred, Rohwer, Forest, Meyer, Folker, and Stoye, Jens. “Finding novel genes in bacterial communities isolated from the environment”. BIOINFORMATICS 22.14 (2006): e281-e289.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2447862Pühler, Alfred, Becker, A., Buhrmester, Jens, Chao, Tzu-Chiao, Rüberg, Silvia, and Weidner, Stefan. “What can bacterial genome research teach us about iron uptake in Sinorhizobium meliloti?”. Biological Nitrogen Fixation, Sustainable Agriculture and the Environment: Proceedings of the 14th International Nitrogen Fixation Congress. Ed. Yi-Ping Wang, Min Lin, Zhe-Xian Tian, Claudine Elmerich, and William E. Newton. Springer, 2005. Current Plant Science and Biotechnology in Agriculture, 41. 119-122.PUB
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603458Hüser, A. T., Chassagnole, C., Lindley, N. D., Merkamm, M., Guyonvarch, A., Elisakova, V., Patek, M., Kalinowski, Jörn, Brune, Iris, Pühler, Alfred, and Tauch, Andreas. “Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71.6 (2005): 3255-3268.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603821Rey, D. A., Nentwich, S. S., Koch, D. J., Rückert, Christian, Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. “The McbR repressor modulated by the effector substance S-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism of Corynebacterium glutamicum ATCC 13032”. MOLECULAR MICROBIOLOGY 56.4 (2005): 871-887.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603291Braun, S. G., Meyer, A., Olst, O., Pühler, Alfred, and Niehaus, Karsten. “Characterization of the Xanthomonas campestris pv. campestris lipopolysaccharide substructures essential for elicitation of an oxidative burst in tobacco cells”. Molecular Plant - Microbe Interactions 18.7 (2005): 674-681.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604683Fehlberg, V., Vieweg, M. F., Dohmann, E. M. N., Hohnjec, N., Pühler, Alfred, Perlick, A. M., and Küster, Helge. “The promoter of the leghaemoglobin gene VfLb29: functional analysis and identification of modules necessary for its activation in the infected cells of root nodules and in the arbuscule-containing cells of mycorrhizal roots”. JOURNAL OF EXPERIMENTAL BOTANY 56.413 (2005): 799-806.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773302
Bartels, Daniela, Kespohl, Sebastian, Albaum, Stefan, Drüke, Tanja, Goesmann, Alexander, Herold, Julia, Kaiser, Olaf, Pühler, Alfred, Pfeiffer, Friedhelm, Raddatz, Günter, Stoye, Jens, Meyer, Folker, and Schuster, Stephan C. “BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison”. Bioinformatics 21.7 (2005): 853-859.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604328Szczepanowski, Rafael, Braun, S, Riedel, V, Schneiker-Bekel, Susanne, Krahn, Irene, Pühler, Alfred, and Schlüter, Andreas. “The 120 592 bp lncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different anti biotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functions”. MICROBIOLOGY-SGM 151.4 (2005): 1095-1111.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864013Tennstedt, T., Heuer, H., Top, E.M., Szczepanowski, Rafael, Pühler, Alfred, and Schlüter, Andreas. “Genomics of resistance plasmids isolated from wastewater treatment plants”. Plasmid 53.1 (2005): 40-41.PUB
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602311Schlüter, Andreas, Heuer, H., Szczepanowski, Rafael, Poler, S. M., Schneiker-Bekel, Susanne, Pühler, Alfred, and Top, E. M. “Plasmid pB8 is closely related to the prototype IncP-1 beta plasmid R751 but transfers poorly to Escherichia coli and carries a new transposon encoding a small multidrug resistance efflux protein”. PLASMID 54.2 (2005): 135-148.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601712Thieme, F, Koebnik, R, Bekel, T, Berger, C, Boch, J, Buttner, D, Caldana, C, Gaigalat, L, Goesmann, Alexander, Kay, S, Kirchner, O, Lanz, C, Linke, B, McHardy, AC, Meyer, F, Mittenhuber, G, Nies, DH, Niesbach-Klosgen, U, Patschkowski, Thomas, Rückert, Christian, Rupp, O, Schneiker-Bekel, Susanne, Schuster, SC, Vorhölter, Frank-Jörg, Weber, E, Pühler, Alfred, Bonas, U, Bartels, D, and Kaiser, O. “Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence”. JOURNAL OF BACTERIOLOGY 187.21 (2005): 7254-7266.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602933Frenzel, A., Manthey, Katja, Perlick, A. M., Meyer, F., Pühler, Alfred, Küster, Helge, and Krajinski, F. “Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes”. Mol Plant-Microbe Interact 18.8 (2005): 771-782.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602010Chao, Tzu-Chiao, Buhrmester, Jens, Hansmeier, Nicole, Pühler, Alfred, and Weidner, Stefan. “Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71.10 (2005): 5969-5982.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1601308Reiss, Günter, Brückl, Hubert, Hütten, Andreas, Schotter, Jörg, Brzeska, Monika, Panhorst, Michael, Sudfeld, Daniela, Becker, Anke, Kamp, Paul-Bertram, Pühler, Alfred, Wojczykowski, Klaus, and Jutzi, Peter. “Magnetoresistive sensors and magnetic nanoparticles for biotechnology”. Journal of Materials Research. MATERIALS RESEARCH SOCIETY, 2005.Vol. 20. Journal of Materials Research. 3294-3302.PUB | DOI | WoS
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601771
Rückert, Christian, Koch, DJ, Rey, DA, Albersmeier, Andreas, Mormann, S, Pühler, Alfred, and Kalinowski, Jörn. “Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction”. BMC Genomics 6.1 (2005): 121.PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602017Koch, DJ, Rückert, Christian, Rey, DA, Mix, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71.10 (2005): 6104-6114.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602137Koch, DJ, Rückert, Christian, Albersmeier, Andreas, Hüser, AT, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate”. Mol Microbiol 58.2 (2005): 480-494.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603956Tennstedt, T., Szczepanowski, Rafael, Krahn, Irene, Pühler, Alfred, and Schlüter, Andreas. “Sequence of the 68,869 bp IncP-1 alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements”. PLASMID 53.3 (2005): 218-238.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604074Hohnjec, N, Vieweg, ME, Pühler, Alfred, Becker, Anke, and Küster, Helge. “Overlaps in the transcriptional profiles of Medicago truncatula roots inoculated with two different Glomus fungi provide insights into the genetic program activated during arbuscular mycorrhiza”. Plant Physiol 137.4 (2005): 1283-1301.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601955Silberbach, M., Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, Walter, B., Kramer, R., and Burkovski, A. “DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum”. JOURNAL OF BIOTECHNOLOGY 119.4 (2005): 357-367.PUB | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317Tauch, Andreas, Kaiser, Olaf, Hain, Torsten, Goesmann, Alexander, Weisshaar, Bernd, Albersmeier, Andreas, Bekel, Thomas, Bischoff, Nicole, Brune, Iris, Chakraborty, Trinad, Kalinowski, Jörn, Meyer, Folker, Rupp, Oliver, Schneiker-Bekel, Susanne, Viehöver, Prisca, and Pühler, Alfred. “Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora”. Journal of Bacteriology 187.13 (2005): 4671-4682.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773606
Brune, Iris, Brinkrolf, Karina, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences”. BMC Genomics 6.1 (2005): 86.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601922Firnhaber, Christian, Pühler, Alfred, and Küster, Helge. “EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods”. Planta 222.2 (2005): 269-283.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603889Silberbach, M., Schafer, M., Hüser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, Kramer, R., and Burkovski, A. “Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71.5 (2005): 2391-2402.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608687Küster, Helge, Hohnjec, N., Krajinski, F., El Yahyaoui, F., Manthey, Katja, Gouzy, J., Dondrup, M., Meyer, F., Kalinowski, Jörn, Brechenmacher, L., van Tuinen, D., Gianinazzi-Pearson, V., Pühler, Alfred, Gamas, P., and Becker, Anke. “Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula”. JOURNAL OF BIOTECHNOLOGY 108.2 (2004): 95-113.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608839McHardy, AC, Pühler, Alfred, Kalinowski, Jörn, and Meyer, F. “Comparing expression level-dependent features in codon usage with protein abundance: An analysis of 'predictive proteomics'”. PROTEOMICS 4.1 (2004): 46-58.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606270Hartmann, M, Barsch, A, Niehaus, K, Pühler, Alfred, Tauch, A, and Kalinowski, Jörn. “The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum”. ARCHIVES OF MICROBIOLOGY 182.4 (2004): 299-312.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656Szczepanowski, Rafael, Krahn, Irene, Linke, Burkhard, Goesmann, Alexander, Pühler, Alfred, and Schlüter, Andreas. “Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system”. Microbiology 150.11 (2004): 3613-3630.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607424McHardy, A. C., Goesmann, Alexander, Pühler, Alfred, and Meyer, F. “Development of joint application strategies for two microbial gene finders”. BIOINFORMATICS 20.10 (2004): 1622-1631.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608345Becker, Anke, Berges, H., Krol, Elizaveta, Bruand, C., Rüberg, Silvia, Capela, D., Lauber, E., Meilhoc, E., Ampe, F., de Bruijn, F. J., Fourment, J., Francez-Charlot, A., Kahn, D., Küster, Helge, Liebe, C., Pühler, Alfred, Weidner, Stefan, and Batut, J. “Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions”. MOLECULAR PLANT-MICROBE INTERACTIONS 17.3 (2004): 292-303.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606500Tauch, Andreas, Bischoff, N., Pühler, Alfred, and Kalinowski, Jörn. “Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium”. PLASMID 52.2 (2004): 102-118.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606644Brzeska, M, Panhorst, Maren, Kamp, Paul-Bertram, Schotter, Jörg, Reiss, Günter, Pühler, Alfred, Becker, Anke, and Brückl, Hubert. “Detection and manipulation of biomolecules by magnetic carriers”. JOURNAL OF BIOTECHNOLOGY 112.1-2 (2004): 25-33.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607832Chao, Tzu-Chiao, Becker, Anke, Buhrmester, Jens, Pühler, Alfred, and Weidner, Stefan. “The Sinorhizobium meliloti fur gene regulates, with dependence on Mn(II), transcription of the sitABCD operon, encoding a metal-type transporter”. JOURNAL OF BACTERIOLOGY 186.11 (2004): 3609-3620.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605648Heuer, H, Szczepanowski, Rafael, Schneiker-Bekel, Susanne, Pühler, Alfred, Top, EM, and Schlüter, Andreas. “The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1 beta group without any accessory genes”. Microbiology 150.11 (2004): 3591-3599.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605701Krahn, Irene, Szczepanowski, Rafael, Pühler, Alfred, and Schlüter, Andreas. “Different molecular rearrangements in the integron of the IncP-1 beta resistance plasmid pB10 isolated from a wastewater treatment plant result in elevated beta-lactam resistance levels”. ARCHIVES OF MICROBIOLOGY 182.6 (2004): 429-435.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606228El Yahyaoui, F., Küster, Helge, Ben Amor, B., Hohnjec, N., Pühler, Alfred, Becker, Anke, Gouzy, J., Vernie, T., Gough, C., Niebel, A., Godiard, L., and Gamas, P. “Expression profiling in Medicago truncatula identifies more than 750 genes differentially expressed during nodulation, including many potential regulators of the symbiotic program(1[w])”. PLANT PHYSIOLOGY 136.2 (2004): 3159-3176.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606475Manthey, Katja, Krajinski, F, Hohnjec, N, Firnhaber, C, Pühler, Alfred, Perlick, AM, and Küster, Helge. “Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses”. Mol Plant-Microbe Interact 17.10 (2004): 1063-1077.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606843Schiene, K., Donath, S., Brecht, M., Pühler, Alfred, and Niehaus, Karsten. “A Rab-related small GTP binding protein is predominantly expressed in root nodules of Medicago sativa”. Molecular Genetics and Genomics 272.1 (2004): 57-66.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773148
Ros, Robert, Eckel, Rainer, Bartels, Frank Wilco, Sischka, Andy, Baumgarth, Birgit, Wilking, Sven David, Pühler, Alfred, Sewald, Norbert, Becker, Anke, and Anselmetti, Dario. “Single molecule force spectroscopy on ligand-DNA complexes: from molecular binding mechanisms to biosensor applications”. Journal of Biotechnology 112.1-2 (2004): 5-12.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773130
Hansmeier, Nicole, Bartels, Frank Wilco, Ros, Robert, Anselmetti, Dario, Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy”. J Biotechnol 112.1-2 (2004): 177-193.PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608095Schotter, Jörg, Kamp, Paul-Bertram, Becker, Anke, Pühler, Alfred, Reiss, Günter, and Brückl, Hubert. “Comparison of a prototype magnetoresistive biosensor to standard fluorescent DNA detection”. BIOSENSORS & BIOELECTRONICS 19.10 (2004): 1149-1156.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608254Pühler, Alfred, Arlat, M, Becker, A, Gottfert, M, Morrissey, JP, and O'Gara, F. “What can bacterial genome research teach us about bacteria-plant interactions?”. Current Opinion in Plant Biology 7.2 (2004): 137-147.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1608336Vieweg, MF, Fruhling, M, Quandt, HJ, Heim, U, Baumlein, H, Pühler, Alfred, Küster, Helge, and Perlick, AM. “The promoter of the Vicia faba L. leghemoglobin gene VfLb29 is specifically activated in the infected cells of root nodules and in the arbuscule-containing cells of mycorrhizal roots from different legume and nonlegume plants”. Mol Plant Microbe Interact 17.1 (2004): 62-69.PUB | DOI | WoS | PubMed | Europe PMC
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773125
Kleine, Hermann, Wilke, Ralf, Pelargus, Christoph, Rott, Karsten, Pühler, Alfred, Reiss, Günter, Ros, Robert, and Anselmetti, Dario. “Absence of intrinsic electric conductivity in single dsDNA molecules”. Journal of Biotechnology 112.1-2 (2004): 91-95.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260Dondrup, M., Goesmann, Alexander, Bartels, D., Kalinowski, Jörn, Krause, L., Linke, Burkhard, Rupp, O., Sczyrba, Alexander, Pühler, Alfred, and Meyer, F. “EMMA: a platform for consistent storage and efficient analysis of microarray data”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 135-146.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609286Goesmann, Alexander, Linke, Burkhard, Rupp, O, Krause, L, Bartels, D, Dondrup, M, McHardy, AC, Wilke, A, Pühler, Alfred, and Meyer, F. “Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 157-167.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609306Vorhölter, Frank-Jörg, Thias, T., Meyer, F., Bekel, T., Kaiser, O., Pühler, Alfred, and Niehaus, Karsten. “Comparison of two Xanthomonas campestris pathovar campestris genomes revealed differences in their gene composition”. Journal of Biotechnology 106.2-3 (2003): 193-202.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609647Schlüter, Andreas, Heuer, H., Szczepanowski, Rafael, Forney, L.J., Thomas, C.M., Pühler, Alfred, and Top, E.M. “The 64 508 bp IncP-1 beta antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1 beta group”. Microbiology 149 (2003): 3139-3153.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610269Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. “Genome-wide analysis of the L-methionine biosynthetic pathway in Corynebacterium glutamicum by targeted gene deletion and homologous complementation”. JOURNAL OF BIOTECHNOLOGY 104.1-3 (2003): 213-228.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1611452Weidner, Stefan, Pühler, Alfred, and Küster, Helge. “Genomics insights into symbiotic nitrogen fixation”. CURRENT OPINION IN BIOTECHNOLOGY 14.2 (2003): 200-205.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610193Hohnjec, N., Perlick, A. M., Pühler, Alfred, and Küster, Helge. “The Medicago truncatula sucrose synthase gene MtSucS1 is activated both in the infected region of root nodules and in the cortex of roots colonized by arbuscular mycorrhizal fungi”. Mol Plant Microbe Interact 16.10 (2003): 903-915.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610484Tennstedt, T, Szczepanowski, Rafael, Braun, S, Pühler, Alfred, and Schluter, A. “Occurrence of integron-associated resistance gene cassettes located on antibiotic resistance plasmids isolated from a wastewater treatment plant”. FEMS MICROBIOLOGY ECOLOGY 45.3 (2003): 239-252.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1611014Brand, S., Niehaus, Karsten, Pühler, Alfred, and Kalinowski, Jörn. “Identification and functional analysis of six mycolyltransferase genes of Corynebacterium glutamicum ATCC 13032: the genes cop1, cmt1, and cmt2 can replace each other in the synthesis of trehalose dicorynomycolate, a component of the mycolic acid layer of the cell envelope”. Archives of Microbiology 180.1 (2003): 33-44.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610260Hartmann, M, Tauch, Andreas, Eggeling, L, Bathe, B, Mockel, B, Pühler, Alfred, and Kalinowski, Jörn. “Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum”. J Biotechnol 104.1-3 (2003): 199-211.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609251Kaiser, O., Bartels, D., Bekel, Thomas, Goesmann, Alexander, Kespohl, S., Pühler, Alfred, and Meyer, F. “Whole genome shotgun sequencing guided-by bioinformatics pipelines - An optimized approach for an established technique”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 121-133.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609272Wilke, A., Rückert, Christian, Bartels, D., Dondrup, M, Goesmann, Alexander, Hüser, A. T., Kespohl, S., Linke, B., Mahne, M., McHardy, A., Pühler, Alfred, and Meyer, F. “Bioinformatics support for high-throughput proteomics”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 147-156.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609328Rüberg, Silvia, Tian, Z. X., Krol, E., Linke, Burkhard, Meyer, F., Wang, Y. P., Pühler, Alfred, Weidner, Stefan, and Becker, Anke. “Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 255-268.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610274McHardy, AC, Tauch, Andreas, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. “Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum”. J Biotechnol 104.1-3 (2003): 229-240.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612324
Tauch, Andreas, Schlüter, Andreas, Bischoff, N., Goesmann, Alexander, Meyer, F., and Pühler, Alfred. “The 79,370-bp conjugative plasmid pB4 consists of an IncP-1 beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family”. Molecular Genetics and Genomics 268.5 (2003): 570-584.PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773880
Meyer, Folker, Goesmann, Alexander, McHardy, Alice C., Bartels, Daniela, Bekel, Thomas, Clausen, Jörn, Kalinowski, Jörn, Linke, Burkhard, Rupp, Oliver, Giegerich, Robert, and Pühler, Alfred. “GenDB - an open source genome annotation system for prokaryote genomes”. Nucleic Acids Research 31.8 (2003): 2187-2195.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610254Tauch, Andreas, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, G. “Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics”. JOURNAL OF BIOTECHNOLOGY 104.1-3 (2003): 27-40.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1611276Rey, D. A., Pühler, Alfred, and Kalinowski, Jörn. “The putative transcriptional repressor McbR, member of the TetR-family, is involved in the regulation of the metabolic network directing the synthesis of sulfur containing amino acids in Corynebacterium glutamicum”. JOURNAL OF BIOTECHNOLOGY 103.1 (2003): 51-65.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609315Golyshin, P. N., Martins Dos Santos, V. A., Kaiser, O., Ferrer, M., Sabirova, Y. S., Lünsdorf, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Pühler, Alfred, and Timmis, K. N. “Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems”. Journal of Biotechnology 106.2-3 (2003): 215-220.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609339Hüser, Andrea T., Becker, Anke, Brune, Iris, Dondrup, Michael, Kalinowski, Jörn, Plassmeier, Jens, Pühler, Alfred, Wiegräbe, I., and Tauch, Andreas. “Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source”. JOURNAL OF BIOTECHNOLOGY 106.2-3 (2003): 269-286.PUB | DOI | WoS | PubMed | Europe PMC
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1895035Kalinowski, Jörn, Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B. J., Gaigalat, L., Goesmann, Alexander, Hartmann, M., Huthmacher, K., Kramer, R., Linke, Burkhard, McHardy, A. C., Meyer, F., Mockel, B., Pfefferle, W., Pühler, Alfred, Rey, D. A., Rückert, Christian, Rupp, O., Sahm, H., Wendisch, Volker F., Wiegrabe, I., and Tauch, Andreas. “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins”. Journal of Biotechnology 104.1-3 (2003): 5-25.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2002 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1613351Schotter, Jörg, Kamp, Paul-Bertram, Becker, Anke, Pühler, Alfred, Brinkmann, D, Schepper, Willi, Brückl, Hubert, and Reiss, Günter. “A biochip based on magnetoresistive sensors”. IEEE Transactions on Magnetics. IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC, 2002.Vol. 38. IEEE TRANSACTIONS ON MAGNETICS. 3365-3367.PUB | DOI | WoS
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613421Tauch, Andreas, Götker, Susanne, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, Georg. “The 27.8-kb R-plasmid pTET3 from Corynebacterium glutamicum encodes the aminoglycoside adenyltransferase gene cassette aadA9 and the regulated tetracycline efflux system Tet 33 flanked by active copies of the widespread insertion sequence IS6100”. Plasmid 48.2 (2002): 117-129.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613851Pühler, Alfred. “Highlights from ECB10 - Applied genome research”. JOURNAL OF BIOTECHNOLOGY 98.2-3 (2002): 143-144.PUB | DOI | WoS | PubMed | Europe PMC
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613598Tauch, Andreas, Kirchner, O, Löffler, B, Götker, S, Pühler, Alfred, and Kalinowski, Jörn. “Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1”. CURRENT MICROBIOLOGY 45.5 (2002): 362-367.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614539Claes, WA, Pühler, Alfred, and Kalinowski, Jörn. “Identification of two prpDBC gene clusters in Corynebacterium glutamicum and their involvement in propionate degradation via the 2-methylcitrate cycle”. J Bacteriol 184.10 (2002): 2728-2739.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613526Tauch, Andreas, Götker, S, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, G. “The alanine racemase gene alr is an alternative to antibiotic resistance genes in cloning systems for industrial Corynebacterium glutamicum strains”. JOURNAL OF BIOTECHNOLOGY 99.1 (2002): 79-91.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614276Tauch, Andreas, Schneiker-Bekel, Susanne, Selbitschka, Werner, Pühler, Alfred, van Overbeek, LS, Smalla, K, Thomas, CM, Bailey, MJ, Forney, LJ, Weightman, A, Ceglowski, P, Pembroke, T, Tietze, E, Schroder, G, Lanka, E, and van Elsas, JD. “The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere”. MICROBIOLOGY-SGM 148 (Pt 6) (2002): 1637-1653.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614833Tauch, Andreas, Homann, I, Mormann, S, Rüberg, Silvia, Billault, A, Bathe, B, Brand, S, Brockmann-Gretza, O, Rückert, Christian, Schischka, N, Wrenger, C, Hoheisel, J, Mockel, B, Huthmacher, K, Pfefferle, W, Pühler, Alfred, and Kalinowski, M. “Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library”. JOURNAL OF BIOTECHNOLOGY 95.1 (2002): 25-38.PUB | DOI | WoS | PubMed | Europe PMC
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1614922Becker, Anke, Rüberg, Silvia, Baumgarth, B., Bertram-Drogatz, P. A., Quester, I., and Pühler, Alfred. “Regulation of succinoglycan and galactoglucan biosynthesis in Sinorhizobium meliloti”. JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY 4.3 (2002): 187-190.PUB | WoS | PubMed | Europe PMC
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2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613903Pühler, Alfred. “Highlights from ECB10 - Biotechnology and Society”. JOURNAL OF BIOTECHNOLOGY 98.1 (2002): 1-2.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616388Albus, Ulrike, Baier, Ruth, Holst, Otto, Pühler, Alfred, and Niehaus, Karsten. “Suppression of an elicitor-induced oxidative burst reaction in Medicago sativa cell cultures by Sinorhizobium meliloti lipopolysaccharides”. New Phytologist 151.3 (2001): 597-606.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616886Schroter, K, Flaschel, Erwin, Pühler, Alfred, and Becker, A. “Xanthomonas campestris pv. campestris secretes the endoglucanases ENGXCA and ENGXCB: construction of an endoglucanase-deficient mutant for industrial xanthan production”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 55.6 (2001): 727-733.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616491Kaiser, O., Pühler, Alfred, and Selbitschka, Werner. “Phylogenetic analysis of microbial diversity in the rhizoplane of oilseed rape (Brassica napus cv. Westar) employing cultivation-dependent and cultivation-independent approaches”. MICROBIAL ECOLOGY 42.2 (2001): 136-149.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616190Vorhölter, Frank-Jörg, Niehaus, Karsten, and Pühler, Alfred. “Lipopolysaccharide biosynthesis in Xanthomonas campestris pv. campestris: a cluster of 15 genes is involved in the biosynthesis of the LPS O-antigen and the LPS core”. MOLECULAR GENETICS AND GENOMICS 266.1 (2001): 79-95.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616804Tauch, A, Wehmeier, L, Gotker, S, Pühler, Alfred, and Kalinowski, Jörn. “Relaxed rrn expression and amino acid requirement of a Corynebacterium glutamicum rel mutant defective in (p)ppGpp metabolism”. FEMS Microbiol Lett 201.1 (2001): 53-58.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616981Hermann, T., Pfefferle, W., Baumann, C., Busker, E., Schaffer, S., Bott, M., Sahm, H., Dusch, N., Kalinowski, Jörn, Pühler, Alfred, Bendt, A. K., Kramer, R., and Burkovski, A. “Proteome analysis of Corynebacterium glutamicum”. ELECTROPHORESIS 22.9 (2001): 1712-1723.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773893
Schneiker-Bekel, Susanne, Keller, Mathias, Dröge, Marcus, Lanka, Erich, Pühler, Alfred, and Selbitschka, Werner. “The genetic organization and evolution of the broad host range mercury resistance plasmid pSB102 isolated from a microbial population residing in the rhizosphere of alfalfa”. Nucleic Acids Res 29.24 (2001): 5169-5181.PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1617736Wehmeier, L, Brockmann-Gretza, O, Pisabarro, A, Tauch, Andreas, Pühler, Alfred, Martin, JF, and Kalinowski, Jörn. “A Corynebacterium glutamicum mutant with a defined deletion within the rpIK gene is impaired in (p)ppGpp accumulation upon amino acid starvation”. Microbiology 147 (2001): 691-700.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1618037Lagares, A, Hozbor, DF, Niehaus, Karsten, Otero, AJLP, Lorenzen, J, Arnold, Walter, and Pühler, Alfred. “Genetic characterization of a Sinorhizobium meliloti chromosomal region involved in lipopolysaccharide biosynthesis”. J Bacteriol 183.4 (2001): 1248-1258.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2001 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1617046Wegener, C, Schroder, S, Kapp, D, Pühler, Alfred, Lopez, ES, Martinez-Abarca, F, Toro, N, Del Papa, MF, Balague, LJ, Lagares, A, Martinez-Drets, G, and Niehaus, Karsten. “Genetic uniformity and symbiotic properties of acid-tolerant alfalfa-nodulating rhizobia isolated from dispersed locations throughout Argentina”. SYMBIOSIS 30.2-3 (2001): 141-162.PUB | WoS
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1615906Kaser, F, and Pühler, Alfred. “Co-operation between Europe and Developing Countries on research about biological nitrogen fixation - needs and means”. JOURNAL OF BIOTECHNOLOGY 91.2-3 (2001): 93-94.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616632Meyer, A, Pühler, Alfred, and Niehaus, Karsten. “The lipopolysaccharides of the phytopathogen Xanthomonas campestris pv. campestris induce an oxidative burst reaction in cell cultures of Nicotiana tabacum”. PLANTA 213.2 (2001): 214-222.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616440Capela, D, Barloy-Hubler, F, Gouzy, J, Bothe, G, Ampe, F, Batut, J, Boistard, P, Becker, Anke, Boutry, M, Cadieu, E, Dreano, S, Gloux, S, Godrie, T, Goffeau, A, Kahn, D, Kiss, E, Lelaure, V, Masuy, D, Pohl, T, Portetelle, D, Pühler, Alfred, Purnelle, B, Ramsperger, U, Renard, C, Thebault, P, Vandenbol, M, Weidner, Stefan, and Galibert, F. “Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021”. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98.17 (2001): 9877-9882.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616469Finan, TM, Weidner, Stefan, Wong, K, Buhrmester, Jens, Chain, P, Vorhölter, Frank-Jörg, Hernandez-Lucas, I, Becker, Anke, Cowie, A, Gouzy, J, Golding, B, and Pühler, Alfred. “The complete sequence of the 1,683-kb pSymB megaplasmid from the N-2-fixing endosymbiont Sinorhizobium meliloti”. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98.17 (2001): 9889-9894.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616678Galibert, F, Finan, TM, Long, SR, Pühler, Alfred, Abola, P, Ampe, F, Barloy-Hubler, F, Barnett, MJ, Becker, Anke, Boistard, P, Bothe, G, Boutry, M, Bowser, L, Buhrmester, Jens, Cadieu, E, Capela, D, Chain, P, Cowie, A, Davis, RW, Dreano, S, Federspiel, NA, Fisher, RF, Gloux, S, Godrie, T, Goffeau, A, Golding, B, Gouzy, J, Gurjal, M, Hernandez-Lucas, I, Hong, A, Huizar, L, Hyman, RW, Jones, T, Kahn, D, Kahn, ML, Kalman, S, Keating, DH, Kiss, E, Komp, C, Lalaure, V, Masuy, D, Palm, C, Peck, MC, Pohl, TM, Portetelle, D, Purnelle, B, Ramsperger, U, Surzycki, R, Thebault, P, Vandenbol, M, Vorhölter, Frank-Jörg, Weidner, Stefan, Wells, DH, Wong, K, Yeh, KC, and Batut, J. “The composite genome of the legume symbiont Sinorhizobium meliloti”. SCIENCE 293.5530 (2001): 668-672.PUB | DOI | WoS | PubMed | Europe PMC
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1615579Becker, JD, Moreira, LM, Kapp, D, Frosch, SC, Pühler, Alfred, and Perlick, AM. “The nodulin VfENOD18 is an ATP-binding protein in infected cells of Vicia faba L. nodules”. PLANT MOLECULAR BIOLOGY 47.6 (2001): 749-759.PUB | DOI | WoS | PubMed | Europe PMC
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1618729Hohnjec, N, Küster, Helge, Albus, U, Frosch, SC, Becker, JD, Pühler, Alfred, Perlick, AM, and Fruhling, M. “The broad bean nodulin VfENOD18 is a member of a novel family of plant proteins with homologies to the bacterial MJ0577 superfamily”. MOLECULAR AND GENERAL GENETICS 264.3 (2000): 241-250.PUB | WoS | PubMed | Europe PMC
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1619044Moreira, Leonilde M., Becker, Jörg D., Pühler, Alfred, and Becker, Anke. “The Sinorhizobium meliloti ExpE1 protein secreted by a type I secretion system involving ExpD1 and ExpD2 is required for biosynthesis or secretion of the exopolysaccharide galactoglucan”. MICROBIOLOGY-UK 146 (2000): 2237-2248.PUB | DOI | WoS | PubMed | Europe PMC
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1618110Fruhling, M, Schroder, G, Hohnjec, N, Pühler, Alfred, Perlick, AM, and Küster, Helge. “The promoter of the Vicia faba L. gene VfEnod12 encoding an early nodulin is active in cortical cells and nodule primordia of transgenic hairy roots of Vicia hirsuta as well as in the prefixing zone II of mature transgenic V-hirsuta root nodules”. PLANT SCIENCE 160.1 (2000): 67-75.PUB | DOI | WoS | PubMed | Europe PMC
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1619894Wiggerich, HG, and Pühler, Alfred. “The exbD2 gene as well as the iron-uptake genes tonB, exbB and exbD1 of Xanthomonas campestris pv. campestris are essential for the induction of a hypersensitive response on pepper (Capsicum annuum)”. MICROBIOLOGY-SGM 146 (2000): 1053-1060.PUB | DOI | WoS | PubMed | Europe PMC
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1620086Weidner, Stefan, Arnold, Walter, Stackebrandt, Erko, and Pühler, Alfred. “Phylogenetic analysis of bacterial communities associated with leaves of the seagrass Halophila stipulacea by a culture-independent small-subunit rRNA gene approach”. MICROBIAL ECOLOGY 39.1 (2000): 22-31.PUB | DOI | WoS | PubMed | Europe PMC
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1620384Tauch, Andreas, Krieft, S, Kalinowski, Jörn, and Pühler, Alfred. “The 51,409-bp R-plasmid pTP10 from the multiresistant clinical isolate Corynebacterium striatum M82B is composed of DNA segments initially identified in soil bacteria and in plant, animal, and human pathogens”. MOLECULAR AND GENERAL GENETICS 263.1 (2000): 1-11.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1619890Droge, M, Pühler, Alfred, and Selbitschka, Werner. “Phenotypic and molecular characterization of conjugative antibiotic resistance plasmids isolated from bacterial communities of activated sludge”. Mol Gen Genet 263.3 (2000): 471-482.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1619605Fruhling, M, Hohnjec, N, Schroder, G, Küster, Helge, Pühler, Alfred, and Perlick, AM. “Genomic organization and expression properties of the VfENOD5 gene from broad bean (Vicia faba L.)”. PLANT SCIENCE 155.2 (2000): 169-178.PUB | DOI | WoS | PubMed | Europe PMC
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1618501Tauch, Andreas, Pühler, Alfred, Kalinowski, Jörn, and Thierbach, G. “TetZ, a new tetracycline resistance determinant discovered in gram-positive bacteria, shows high homology to gram-negative regulated efflux systems”. PLASMID 44.3 (2000): 285-291.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1619780Schwieger, F, Dammann-Kalinowski, T, Dresing, U, Selbitschka, Werner, Munch, JC, Pühler, Alfred, Keller, M, and Tebbe, CC. “Field lysimeter investigation with luciferase-gene (luc)-tagged Sinorhizobium meliloti strains to evaluate the ecological significance of soil inoculation and a recA-mutation”. SOIL BIOLOGY & BIOCHEMISTRY 32.6 (2000): 859-868.PUB | DOI | WoS
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1619538Schiene, K, Pühler, Alfred, and Niehaus, Karsten. “Transgenic tobacco plants that express an antisense construct derived from a Medicago sativa cDNA encoding a rac-related small GTP-binding protein fail to develop necrotic lesions upon elicitor infiltration”. MOLECULAR AND GENERAL GENETICS 263.5 (2000): 761-770.PUB | DOI | WoS | PubMed | Europe PMC
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623579Segundo, E, Martinez-Abarca, F, van Dillewijn, P, Fernandez-Lopez, M, Lagares, A, Martinez-Drets, G, Niehaus, Karsten, Pühler, Alfred, and Toro, N. “Characterisation of symbiotically efficient alfalfa-nodulating rhizobia isolated from acid soils of Argentina and Uruguay”. FEMS MICROBIOLOGY ECOLOGY 28.2 (1999): 169-176.PUB | DOI | WoS
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623351Rüberg, Silvia, Pühler, Alfred, and Becker, Anke. “Biosynthesis of the exopolysaccharide galactoglucan in Sinorhizobium meliloti is subject to a complex control by the phasphate-dependent regulator PhoB and the proteins ExpG and MucR”. MICROBIOLOGY-UK 145.3 (1999): 603-611.PUB | DOI | WoS | PubMed | Europe PMC
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1622240Sharypova, Larissa A., Yurgel, S. N., Keller, M., Simarov, B. V., Pühler, Alfred, and Becker, A. “The eff-482 locus of Sinorhizobium meliloti CXM1-105 that influences symbiotic effectiveness consists of three genes encoding an endoglycanase, a transcriptional regulator and an adenylate cyclase”. MOLECULAR AND GENERAL GENETICS 261.6 (1999): 1032-1044.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1621449Elischewski, F, Pühler, Alfred, and Kalinowski, Jörn. “Pantothenate production in Escherichia coli K12 by enhanced expression of the panE gene encoding ketopantoate reductase”. JOURNAL OF BIOTECHNOLOGY 75.2-3 (1999): 135-146.PUB | DOI | WoS | PubMed | Europe PMC
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1622710Michel, Klaus-Peter, Krüger, Friedrich, Pühler, Alfred, and Pistorius, Elfriede. “Molecular characterization of idiA and adjacent genes in the cyanobacteria Synechococcus sp strains PCC 6301 and PCC 7942”. Microbiology 145.6 (1999): 1473-1484.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623143Hohnjec, N, Becker, JD, Pühler, Alfred, Perlick, AM, and Küster, Helge. “Genomic organization and expression properties of the MtSucS1 gene, which encodes a nodule-enhanced sucrose synthase in the model legume Medicago truncatula”. MOLECULAR AND GENERAL GENETICS 261.3 (1999): 514-522.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1621967Schneiker-Bekel, Susanne, Kosier, B, Pühler, Alfred, and Selbitschka, Werner. “The Sinorhizobium meliloti insertion sequence (IS) element ISRm14 is related to a previously unrecognized IS element located adjacent to the Escherichia coli locus of enterocyte effacement (LEE) pathogenicity island”. CURRENT MICROBIOLOGY 39.5 (1999): 274-281.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1622453Dröge, M., Pühler, Alfred, and Selbitschka, Werner. “Horizontal gene transfer among bacteria in terrestrial and aquatic habitats as assessed by microcosm and field studies”. BIOLOGY AND FERTILITY OF SOILS 29.3 (1999): 221-245.PUB | DOI | WoS
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1622573Niemann, S, Dammann-Kalinowski, T, Nagel, A, Pühler, Alfred, and Selbitschka, Werner. “Genetic basis of enterobacterial repetitive intergenic consensus (ERIC)-PCR fingerprint pattern in Sinorhizobium meliloti and identification of S-meliloti employing PCR primers derived from an ERIC-PCR fragment”. ARCHIVES OF MICROBIOLOGY 172.1 (1999): 22-30.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623329Tauch, Andreas, Krieft, S, Pühler, Alfred, and Kalinowski, Jörn. “The tetAB genes of the Corynebacterium striatum R-plasmid pTP10 encode an ABC transporter and confer tetracycline, oxytetracycline and oxacillin resistance in Corynebacterium glutamicum”. FEMS Microbiol Lett 173.1 (1999): 203-209.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623284Dusch, N, Pühler, Alfred, and Kalinowski, Jörn. “Expression of the Corynebacterium glutamicum panD gene encoding L-aspartate-alpha-decarboxylase leads to pantothenate overproduction in Escherichia coli”. Appl Environ Microbiol 65.4 (1999): 1530-1539.PUB | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623474Selbitschka, Werner, Zekri, S, Schroder, G, Pühler, Alfred, and Toro, N. “The Sinorhizobium meliloti insertion sequence (IS) elements ISRm102F34-1/ISRm7 and ISRm220-13-5 belong to a new family of insertion sequence elements”. FEMS MICROBIOLOGY LETTERS 172.1 (1999): 1-7.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1621156Quast, K, Bathe, B, Pühler, Alfred, and Kalinowski, Jörn. “The Corynebacterium glutamicum insertion sequence ISCg2 prefers conserved target sequences located adjacent to genes involved in aspartate and glutamate metabolism”. Mol Gen Genet 262.3 (1999): 568-578.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623271Del Papa, MF, Balague, LJ, Sowinski, SC, Wegener, C, Segundo, E, Abarca, FM, Toro, N, Niehaus, Karsten, Pühler, Alfred, Aguilar, OM, Martinez-Drets, G, and Lagares, A. “Isolation and characterization of alfalfa-nodulating rhizobia present in acidic soils of Central Argentina and Uruguay”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 65.4 (1999): 1420-1427.PUB | WoS | PubMed | Europe PMC
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626161Katzen, F, Ferreiro, DU, Oddo, CG, Ielmini, MV, Becker, A, Pühler, Alfred, and Ielpi, L. “Xanthomonas campestris pv. campestris gum mutants: Effects on xanthan biosynthesis and plant virulence”. J Bacteriol 180.7 (1998): 1607-1617.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626543Becker, Anke, and Pühler, Alfred. “Specific amino acid substitutions in the proline-rich motif of the Rhizobium meliloti ExoP protein result in enhanced production of low-molecular-weight succinoglycan at the expense of high-molecular-weight succinoglycan”. JOURNAL OF BACTERIOLOGY 180.2 (1998): 395-399.PUB | DOI | WoS | PubMed | Europe PMC
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626331Götting, C., Thierbach, G., Pühler, Alfred, and Kalinowski, Jörn. “Versatile low-copy-number plasmids for temperature-inducible overexpression of bacterial genes in Escherichia coli”. BIOTECHNIQUES 24.3 (1998): 362-+.PUB | DOI | WoS | PubMed | Europe PMC
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626278Bertram-Drogatz, P. A., Quester, I., Becker, A., and Pühler, Alfred. “The Sinorhizobium meliloti MucR protein, which is essential for the production of high-molecular-weight succinoglycan exopolysaccharide, binds to short DNA regions upstream of exoH and exoY”. MOLECULAR AND GENERAL GENETICS 257.4 (1998): 433-441.PUB | DOI | WoS | PubMed | Europe PMC
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624640Droge, M, Pühler, Alfred, and Selbitschka, Werner. “Horizontal gene transfer as a biosafety issue: A natural phenomenon of public concern”. JOURNAL OF BIOTECHNOLOGY 64.1 (1998): 75-90.PUB | DOI | WoS | PubMed | Europe PMC
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624829Becker, A, Katzen, F, Pühler, Alfred, and Ielpi, L. “Xanthan gum biosynthesis and application: a biochemical/genetic perspective”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 50.2 (1998): 145-152.PUB | DOI | WoS | PubMed | Europe PMC
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624721Tauch, Andreas, Zheng, ZX, Pühler, Alfred, and Kalinowski, Jörn. “Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum”. Plasmid 40.2 (1998): 126-139.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624834Aguilar, OM, Lopez, MV, Riccillo, PM, Gonzalez, RA, Pagano, M, Grasso, DH, Pühler, Alfred, and Favelukes, G. “Prevalence of the Rhizobium etli-like allele in genes coding for 16S rRNA among the indigenous rhizobial populations found associated with wild beans from the Southern Andes in Argentina”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 64.9 (1998): 3520-3524.PUB | WoS | PubMed | Europe PMC | GenBank
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1625135Wehmeier, L, Schafer, A, Burkovski, A, Kramer, R, Mechold, U, Malke, H, Pühler, Alfred, and Kalinowski, Jörn. “The role of the Corynebacterium glutamicum rel gene in (p)ppGpp metabolism”. Microbiology 144.7 (1998): 1853-1862.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1625704Tauch, A, Hermann, T, Burkovski, A, Kramer, R, Pühler, Alfred, and Kalinowski, Jörn. “Isoleucine uptake in Corynebacterium glutamicum ATCC 13032 is directed by the brnQ gene product”. ARCHIVES OF MICROBIOLOGY 169.4 (1998): 303-312.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624369Kohne, S, Neumann, K, Pühler, Alfred, and Broer, I. “The heat-treatment induced reduction of the pat gene encoded herbicide resistance in Nicotiana tabacum is influenced by the transgene sequence”. JOURNAL OF PLANT PHYSIOLOGY 153.5-6 (1998): 631-642.PUB | WoS
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1998 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1869567Becker, Anke, and Pühler, Alfred. “Production of exopolysaccharides”. The Rhizobiaceae. Molecular Biology of Model Plant-Associated Bacteria. Ed. H. P. Spaink, A. Kondorosi, and P. J. J. Hooykaas. Dordrecht: Kluwer Academic Publishers, 1998. 97-118.PUB | DOI
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1623827Dresing, U, Hagen, M, Selbitschka, Werner, Pühler, Alfred, and Keller, M. “Reduced survival of a RecA-deficient Sinorhizobium meliloti strain in sterile and non-sterile soil during heat stress”. FEMS MICROBIOLOGY ECOLOGY 27.4 (1998): 327-338.PUB | DOI | WoS
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1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1624995Niehaus, Karsten, Lagares, A, and Pühler, Alfred. “A Sinorhizobium meliloti lipopolysaccharide mutant induces effective nodules on the host plant Medicago sativa (Alfalfa) but fails to establish a symbiosis with Medicago truncatula”. MOLECULAR PLANT-MICROBE INTERACTIONS 11.9 (1998): 906-914.PUB | DOI | WoS
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626641Steinmann, D, Koplin, R, Pühler, Alfred, and Niehaus, Karsten. “Xanthomonas campestris pv. campestris lpsI and lpsJ genes encoding putative proteins with sequence similarity to the alpha- and beta-subunits of 3-oxoacid CoA-transferases are involved in LPS biosynthesis”. ARCHIVES OF MICROBIOLOGY 168.6 (1997): 441-447.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626635Schäfer, A, Tauch, Andreas, Droste, N, Pühler, Alfred, and Kalinowski, Jörn. “The Corynebacterium glutamicum cglIM gene encoding a 5-cytosine methyltransferase enzyme confers a specific DNA methylation pattern in an McrBC-deficient Escherichia coli strain”. Gene 203.2 (1997): 95-101.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626887Wiggerich, HG, Klauke, B, Koplan, R, Priefer, UB, and Pühler, Alfred. “Unusual structure of the tonB-exb DNA region of Xanthomonas campestris pv. campestris: tonB, exbB, and exbD1 are essential for ferric iron uptake, but exbD2 is not”. JOURNAL OF BACTERIOLOGY 179.22 (1997): 7103-7110.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1627429Niemann, S, Keel, C, Pühler, Alfred, and Selbitschka, Werner. “Biocontrol strain Pseudomonas flourescens CHAO and its genetically modified derivative with enhanced biocontrol capability exert comparable effects on the structure of a Sinorhizobium meliloti population in gnotobiotic systems”. BIOLOGY AND FERTILITY OF SOILS 25.3 (1997): 240-244.PUB | DOI | WoS
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636853Niemann, S, Pühler, Alfred, and Selbitschka, Werner. “Growth and nodulation competitiveness of Sinorhizobium meliloti L1 (RecA(-)) is less than that of its isogenic strain L33 (RecA(+)) but comparable to that of two S-meliloti wild-type isolates”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 47.5 (1997): 525-529.PUB | DOI | WoS
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1637471Jäger, W, Kalinowski, Jörn, and Pühler, Alfred. “A Corynebacterium glutamicum gene conferring multidrug resistance in the heterologous host Escherichia coli”. J Bacteriol 179.7 (1997): 2449-2451.PUB | WoS | PubMed | Europe PMC | GenBank
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1627371Uhde, C, Schmidt, R, Jording, Doris, Selbitschka, Werner, and Pühler, Alfred. “Stationary-phase mutants of Sinorhizobium meliloti are impaired in stationary-phase survival or in recovery to logarithmic growth”. JOURNAL OF BACTERIOLOGY 179.20 (1997): 6432-6440.PUB | DOI | WoS | PubMed | Europe PMC
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636817Hagen, M, Pühler, Alfred, and Selbitschka, Werner. “The persistence of bioluminescent Rhizobium meliloti strains L1 (RecA(-)) and L33 (RecA(+)) in non-sterile microcosms depends on the soil type, on the co-cultivation of the host legume alfalfa and on the presence of an indigenous R-meliloti population”. PLANT AND SOIL 188.2 (1997): 257-266.PUB | DOI | WoS
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1637295Küster, Helge, Albus, U., Fruhling, M., Tchetkova, S. A., Tikhonovitch, I. A., Pühler, Alfred, and Perlick, A. M. “The asparagine synthetase gene VfAS1 is strongly expressed in the nitrogen-fixing zone of broad bean (Vicia faba L) root nodules”. PLANT SCIENCE 124.1 (1997): 89-95.PUB | DOI | WoS
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1637371Niemann, S, Pühler, Alfred, Tichy, HV, Simon, R, and Selbitschka, Werner. “Evaluation of the resolving power of three different DNA fingerprinting methods to discriminate among isolates of a natural Rhizobium meliloti population”. JOURNAL OF APPLIED MICROBIOLOGY 82.4 (1997): 477-484.PUB | DOI | WoS | PubMed | Europe PMC
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1628214Fruhling, M, Roussel, H, GianinazziPearson, V, Pühler, Alfred, and Perlick, AM. “The Vicia faba leghemoglobin gene VfLb29 is induced in root nodules and in roots colonized by the arbuscular mycorrhizal fungus Glomus fasciculatum”. MOLECULAR PLANT-MICROBE INTERACTIONS 10.1 (1997): 124-131.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1626566Kohring, B, Baier, Ruth, Niehaus, Karsten, Pühler, Alfred, and Flaschel, Erwin. “Production of nodulation factors by Rhizobium meliloti: fermentation, purification and characterization of glycolipids”. GLYCOCONJUGATE JOURNAL 14.8 (1997): 963-971.PUB | DOI | WoS | PubMed | Europe PMC
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1637917Schroder, G, Fruhling, M, Pühler, Alfred, and Perlick, AM. “The temporal and spatial transcription pattern in root nodules of Vicia faba nodulin genes encoding glycine-rich proteins”. PLANT MOLECULAR BIOLOGY 33.1 (1997): 113-123.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1638004Becker, Anke, Rüberg, Silvia, Küster, Helge, Roxlau, A., Keller, M., Ivashina, T., Cheng, H. P., Walker, G. C., and Pühler, Alfred. “The 32-kilobase exp gene cluster of Rhizobium meliloti directing the biosynthesis of galactoglucan: Genetic organization and properties of the encoded gene products”. J Bacteriol 179.4 (1997): 1375-1384.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636938Bertram-Drogatz, P. A., Rüberg, Silvia, Becker, Anke, and Pühler, Alfred. “The regulatory protein MucR binds to a short DNA region located upstream of the mucR coding region in Rhizobium meliloti”. Mol Gen Genet 254.5 (1997): 529-538.PUB | DOI | WoS | PubMed | Europe PMC
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1639789Weidner, Stefan, Arnold, Walter, and Pühler, Alfred. “Diversity of uncultured microorganisms associated with the seagrass Halophila stipulacea estimated by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 62.3 (1996): 766-771.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1638884Katzen, F., Becker, A., Zorreguieta, A, Pühler, Alfred, and Ielpi, L. “Promoter analysis of the Xanthomonas campestris pv campestris gum operon directing biosynthesis of the xanthan polysaccharide”. Journal of Bacteriology 178.14 (1996): 4313-4318.PUB | DOI | WoS | PubMed | Europe PMC
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1637976Fernandez-Gonzalez, C., Gil, J.A., Mateos, L. M., Schwarzer, A., Schafer, A., Kalinowski, Jörn, Pühler, Alfred, and Martin, J. F. “Construction of L-lysine-overproducing strains of Brevibacterium lactofermentum by targeted disruption of the hom and thrB genes”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 46.5-6 (1996): 554-558.PUB | DOI | WoS | PubMed | Europe PMC
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1638183Küster, Helge, Fruhling, M, Pühler, Alfred, and Perlick, AM. “The modular nodulins Nvf-28/32 of broad bean (Vicia faba L): Alternative exon combinations account for different modular structures”. MOLECULAR & GENERAL GENETICS 252.6 (1996): 648-657.PUB | WoS | PubMed | Europe PMC | GenBank
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1638621Jäger, W, Peters-Wendisch, Petra, Kalinowski, Jörn, and Pühler, Alfred. “A Corynebacterium glutamicum gene encoding a two-domain protein similar to biotin carboxylases and biotin-carboxyl-carrier proteins”. Arch Microbiol 166.2 (1996): 76-82.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1628425Perlick, AM, Albus, U, Stavridis, T, Fruhling, M, Küster, Helge, and Pühler, Alfred. “The Vicia faba lipoxygenase gene VfLOX1 is expressed in the root nodule parenchyma”. MOLECULAR PLANT-MICROBE INTERACTIONS 9.9 (1996): 860-863.PUB | DOI | WoS | PubMed | Europe PMC
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629067Perlick, AM, Fruhling, M, Schroder, G, Frosch, SC, and Pühler, Alfred. “The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins”. PLANT PHYSIOLOGY 110.1 (1996): 147-154.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1638387Bathe, B., Kalinowski, Jörn, and Pühler, Alfred. “A physical and genetic map of the Corynebacterium glutamicum ATCC 13032 chromosome”. MOLECULAR & GENERAL GENETICS 252.3 (1996): 255-265.PUB | WoS | PubMed | Europe PMC
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1996 | Monographie | Veröffentlicht | PUB-ID: 1863025van den Daele, Wolfgang, Pühler, Alfred, Sukopp, Herbert, Bora, Alfons, Döbert, Rainer, Neubert, Susanne, and Siewert, Viola. Grüne Gentechnik im Widerstreit. Modell einer partizipativen Technikfolgenabschätzung zum Einsatz transgener herbizidresistenter Pflanzen. Weinheim: VCH, 1996.PUB
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1638545Villadas, PJ, Burgos, P, Jording, Doris, Selbitschka, Werner, Pühler, Alfred, and Toro, N. “Comparative analysis of the genetic structure of a Rhizobium meliloti field population before and after environmental release of the highly competitive R-meliloti strain GR4”. FEMS MICROBIOLOGY ECOLOGY 21.1 (1996): 37-45.PUB | DOI | WoS
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1639029Kriete, G, Niehaus, Karsten, Perlick, AM, Pühler, Alfred, and Broer, I. “Male sterility in transgenic tobacco plants induced by tapetum-specific deacetylation of the externally applied non-toxic compound N-acetyl-L-phosphinothricin”. PLANT JOURNAL 9.6 (1996): 809-818.PUB | DOI | WoS | PubMed | Europe PMC
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1639079Dammann-Kalinowski, T, Niemann, S, Keller, M, Selbitschka, Werner, Tebbe, CC, and Pühler, Alfred. “Characterization of two bioluminescent Rhizobium meliloti strains constructed for field releases”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 45.4 (1996): 509-512.PUB | WoS | PubMed | Europe PMC
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1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1638415Mateos, L.M., Schäfer, A., Kalinowski, Jörn, Martin, J. F., and Pühler, Alfred. “Integration of narrow-host-range vectors from Escherichia coli into the genomes of amino acid-producing corynebacteria after intergeneric conjugation”. JOURNAL OF BACTERIOLOGY 178.19 (1996): 5768-5775.PUB | DOI | WoS | PubMed | Europe PMC
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640841Selbitschka, Werner, Jording, Doris, NIEMAN, S, SCHMIDT, R, Pühler, Alfred, MENDUM, T, and HIRSCH, P. “CONSTRUCTION AND CHARACTERIZATION OF A RHIZOBIUM-LEGUMINOSARUM BIOVAR VICIAE STRAIN DESIGNED TO ASSESS HORIZONTAL GENE-TRANSFER IN THE ENVIRONMENT”. FEMS MICROBIOLOGY LETTERS 128.3 (1995): 255-263.PUB | DOI | WoS | PubMed | Europe PMC
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1641351Selbitschka, Werner, DRESING, U, HAGEN, M, NIEMANN, S, and Pühler, Alfred. “A BIOLOGICAL CONTAINMENT SYSTEM FOR RHIZOBIUM-MELILOTI BASED ON THE USE OF RECOMBINATION-DEFICIENT (RECA(-)) STRAINS”. FEMS MICROBIOLOGY ECOLOGY 16.3 (1995): 223-232.PUB | DOI | WoS
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640480RIEDEL, KU, JOUANNEAU, Y, MASEPOHL, B, Pühler, Alfred, and KLIPP, W. “A RHIZOBIUM-MELILOTI FERREDOXIN (FDXN) PURIFIED FROM ESCHERICHIA-COLI DONATES ELECTRONS TO RHODOBACTER-CAPSULATUS NITROGENASE”. EUROPEAN JOURNAL OF BIOCHEMISTRY 231.3 (1995): 742-746.PUB | DOI | WoS | PubMed | Europe PMC
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640027Selbitschka, Werner, Arnold, Walter, Jording, Doris, KOSIER, B, TORO, N, and Pühler, Alfred. “THE INSERTION-SEQUENCE ELEMENT ISRM2011-2 BELONGS TO THE IS630-TC1 FAMILY OF TRANSPOSABLE ELEMENTS AND IS ABUNDANT IN RHIZOBIUM-MELILOTI”. GENE 163.1 (1995): 59-64.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1641658Jäger, W, Schäfer, A, Kalinowski, Jörn, and Pühler, Alfred. “Isolation of insertion elements from gram-positive Brevibacterium, Corynebacterium and Rhodococcus strains using the Bacillus subtilis sacB gene as a positive selection marker”. FEMS MICROBIOLOGY LETTERS 126.1 (1995): 1-6.PUB | WoS | PubMed | Europe PMC
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640460Küster, Helge, SCHRODER, G, FRUHLING, M, PICH, U, RIEPING, M, SCHUBERT, I, PERLICK, AM, and Pühler, Alfred. “THE NODULE-SPECIFIC VFENOD-GRP3 GENE ENCODING A GLYCINE-RICH EARLY NODULIN IS LOCATED ON CHROMOSOME-I OF VICIA-FABA L AND IS PREDOMINANTLY EXPRESSED IN THE INTERZONE II-III OF ROOT-NODULES”. PLANT MOLECULAR BIOLOGY 28.3 (1995): 405-421.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640693Tauch, Andreas, Kassing, F, Kalinowski, Jörn, and Pühler, Alfred. “The erythromycin resistance gene of the Corynebacterium xerosis R-plasmid pTP10 also carrying chloramphenicol, kanamycin, and tetracycline resistances is capable of transposition in Corynebacterium glutamicum”. PLASMID 33.3 (1995): 168-179.PUB | DOI | WoS | PubMed | Europe PMC
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1639972Tauch, Andreas, KASSING, F, Kalinowski, Jörn, and Pühler, Alfred. “The Corynebacterium xerosis composite transposon Tn5432 consists of two identical insertion sequences, designated IS1249, flanking the erythromycin resistance gene ermCX”. Plasmid 34.2 (1995): 119-131.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640119Becker, A, Schmidt, M, Jäger, W, and Pühler, Alfred. “New gentamicin-resistance and lacZ promoter-probe cassettes suitable for insertion mutagenesis and generation of transcriptional fusions”. GENE 162.1 (1995): 37-39.PUB | DOI | WoS | PubMed | Europe PMC
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1641112KELLER, M, ROXLAU, A, WENG, WM, SCHMIDT, M, QUANDT, J, Niehaus, Karsten, Jording, Doris, Arnold, Walter, and Pühler, Alfred. “MOLECULAR ANALYSIS OF THE RHIZOBIUM-MELILOTI MUCR GENE REGULATING THE BIOSYNTHESIS OF THE EXOPOLYSACCHARIDES SUCCINOGLYCAN AND GALACTOGLUCAN”. MOLECULAR PLANT-MICROBE INTERACTIONS 8.2 (1995): 267-277.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1640829BECKER, A, Niehaus, Karsten, and Pühler, Alfred. “Low-molecular-weight succinoglycan is predominantly produced by Rhizobium meliloti strains carrying a mutated ExoP protein characterized by a periplasmic N-terminal domain and a missing C-terminal domain”. Mol Microbiol 16.2 (1995): 191-204.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1641543BROER, I, DROGELASER, W, BARKER, RF, NEUMANN, K, KLIPP, W, and Pühler, Alfred. “IDENTIFICATION OF THE AGROBACTERIUM-TUMEFACIENS C58 T-DNA GENE-E AND GENE-F AND THEIR IMPACT ON CROWN GALL TUMOR-FORMATION”. PLANT MOLECULAR BIOLOGY 27.1 (1995): 41-57.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629142Becker, Anke, Küster, Helge, Niehaus, Karsten, and Pühler, Alfred. “Extension of the Rhizobium meliloti succinoglycan biosynthesis gene cluster: Identification of the exsA gene encoding an ABC transporter protein, and the exsB gene which probably codes for a regulator of succinoglycan biosynthesis”. Mol Gen Genet 249.5 (1995): 487-497.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629166Küster, Helge, Quandt, HJ, Broer, I, Perlick, AM, and Pühler, Alfred. “The promoter of the Vicia faba L VfENOD-GRP3 gene encoding a glycine-rich early nodulin mediates a predominant gene expression in the interzone II-III region of transgenic Vicia hirsuta root nodules”. PLANT MOLECULAR BIOLOGY 29.4 (1995): 759-772.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1994 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2450503Pühler, Alfred. “Horizontal gene transfer: mechanisms and implications”., Bielefeld, Bielefeld: Center for Interdisciplinary Research, University of Bielefeld, Germany, 1994.PUB
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629472Ulrich, A., and Pühler, Alfred. “The new class II transposon Tn163 is plasmid-borne in two unrelated Rhizobium leguminosarum biovar viciae strains”. Molecular & General Genetics 242.5 (1994): 505-516.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629547Küster, Helge, Perlick, A. M., and Pühler, Alfred. “MEMBERS OF A BROADBEAN NODULIN FAMILY WITH PARTIAL HOMOLOGIES TO THE ALFALFA NODULIN-25 ARE COMPOSED OF 2 TYPES OF AMINO-ACID REPEATS FLANKED BY UNIQUE AMINO-ACID-SEQUENCE TERMINI”. PLANT MOLECULAR BIOLOGY 24.1 (1994): 143-157.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1644393Schäfer, A, Kalinowski, Jörn, and Pühler, Alfred. “Increased fertility of Corynebacterium glutamicum recipients in intergeneric matings with Escherichia coli after stress exposure”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 60.2 (1994): 756-759.PUB | WoS | PubMed | Europe PMC
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1642309Jording, Doris, UHDE, C, SCHMIDT, R, and Pühler, Alfred. “THE C-4-DICARBOXYLATE TRANSPORT-SYSTEM OF RHIZOBIUM-MELILOTI AND ITS ROLE IN NITROGEN-FIXATION DURING SYMBIOSIS WITH ALFALFA (MEDICAGO-SATIVA)”. EXPERIENTIA 50.10 (1994): 874-883.PUB | DOI | WoS
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1642272Tauch, Andreas, Kirchner, O, Wehmeier, L, Kalinowski, Jörn, and Pühler, Alfred. “Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli”. FEMS MICROBIOLOGY LETTERS 123.3 (1994): 343-347.PUB | DOI | WoS | PubMed | Europe PMC
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1643046SCHAEFER, A, Tauch, Andreas, JAEGER, W, Kalinowski, Jörn, THIERBACH, G, and Pühler, Alfred. “Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum”. Gene 145.1 (1994): 69-73.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1642103Schäfer, A, Schwarzer, A, Kalinowski, Jörn, and Pühler, Alfred. “Cloning and characterization of a DNA region encoding a stress-sensitive restriction system from Corynebacterium glutamicum ATCC 13032 and analysis of its role in intergeneric conjugation with Escherichia coli”. J Bacteriol 176.23 (1994): 7309-7319.PUB | WoS | PubMed | Europe PMC | GenBank
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629475Miksch, Gerd, Arnold, Walter, LENTZSCH, P, PRIEFER, UB, and Pühler, Alfred. “A 4.6 KB DNA REGION OF RHIZOBIUM-MELILOTI INVOLVED IN DETERMINING UREASE AND HYDROGENASE ACTIVITIES CARRIES THE STRUCTURAL GENES FOR UREASE (UREA, UREB, UREC) INTERRUPTED BY OTHER OPEN READING FRAMES”. MOLECULAR & GENERAL GENETICS 242.5 (1994): 539-550.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1643885DROGELASER, W, SIEMELING, U, Pühler, Alfred, and BROER, I. “THE METABOLITES OF THE HERBICIDE L-PHOSPHINOTHRICIN (GLUFOSINATE) - IDENTIFICATION, STABILITY, AND MOBILITY IN TRANSGENIC, HERBICIDE-RESISTANT, AND UNTRANSFORMED PLANTS”. PLANT PHYSIOLOGY 105.1 (1994): 159-166.PUB | DOI | WoS | PubMed | Europe PMC
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1645024BECKER, A, KLEICKMANN, A, KELLER, M, Arnold, Walter, and Pühler, Alfred. “Identification and analysis of the Rhizobium meliloti exoAMONP genes involved in exopolysaccharide biosynthesis and mapping of promoters located on the exoHKLAMONP fragment”. Mol Gen Genet 241.3-4 (1993): 367-379.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1645781BECKER, A, KLEICKMANN, A, Arnold, Walter, and Pühler, Alfred. “Analysis of the Rhizobium meliloti exoH/exoK/exoL fragment: ExoK shows homology to excreted endo-beta-1,3-1,4-glucanases and ExoH resembles membrane proteins”. Mol Gen Genet 238.1-2 (1993): 145-154.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1644297BECKER, A, KLEICKMANN, A, KUESTER, H, KELLER, M, Arnold, Walter, and Pühler, Alfred. “Analysis of the Rhizobium meliloti genes exoU, exoV, exoW, exoT, and exoI involved in exopolysaccharide biosynthesis and nodule invasion: exoU and exoW probably encode glucosyltransferases”. Mol Plant Microbe Interact 6.6 (1993): 735-744.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1645118Jording, Doris, and Pühler, Alfred. “THE MEMBRANE TOPOLOGY OF THE RHIZOBIUM-MELILOTI C4-DICARBOXYLATE PERMEASE (DCTA) AS DERIVED FROM PROTEIN FUSIONS WITH ESCHERICHIA-COLI K12 ALKALINE-PHOSPHATASE (PHOA) AND BETA-GALACTOSIDASE (LACZ)”. MOLECULAR & GENERAL GENETICS 241-241.1-2 (1993): 106-114.PUB | DOI | WoS | PubMed | Europe PMC
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1645233Küster, Helge, Fruhling, M., Perlick, A. M., and Pühler, Alfred. “THE SUCROSE SYNTHASE GENE IS PREDOMINANTLY EXPRESSED IN THE ROOT-NODULE TISSUE OF VICIA-FABA”. MOLECULAR PLANT-MICROBE INTERACTIONS 6.4 (1993): 507-514.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1646539Selbitschka, Werner, NIEMANN, S, and Pühler, Alfred. “CONSTRUCTION OF GENE REPLACEMENT VECTORS FOR GRAM- BACTERIA USING A GENETICALLY MODIFIED SACRB GENE AS A POSITIVE SELECTION MARKER”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 38.5 (1993): 615-618.PUB | WoS
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1646943Jording, Doris, SHARMA, PK, SCHMIDT, R, ENGELKE, T, UHDE, C, and Pühler, Alfred. “REGULATORY ASPECTS OF THE C4-DICARBOXYLATE TRANSPORT IN RHIZOBIUM-MELILOTI - TRANSCRIPTIONAL ACTIVATION AND DEPENDENCE ON EFFECTIVE SYMBIOSIS”. JOURNAL OF PLANT PHYSIOLOGY 141.1 (1993): 18-27.PUB | DOI | WoS
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1644905STEINMANN, D, WIGGERICH, HG, KLAUKE, B, SCHRAMM, U, Pühler, Alfred, and PRIEFER, UB. “SATURATION MUTAGENESIS IN ESCHERICHIA-COLI OF A CLONED XANTHOMONAS-CAMPESTRIS DNA FRAGMENT WITH THE LUX TRANSPOSON TN4431 USING THE DELIVERY PLASMID PDS1, THERMOSENSITIVE IN REPLICATION”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 40.2-3 (1993): 356-360.PUB | WoS | PubMed | Europe PMC
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1645218PERLICK, AM, and Pühler, Alfred. “A SURVEY OF TRANSCRIPTS EXPRESSED SPECIFICALLY IN ROOT-NODULES OF BROADBEAN (VICIA-FABA L)”. PLANT MOLECULAR BIOLOGY 22.6 (1993): 957-970.PUB | DOI | WoS | PubMed | Europe PMC
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1645883MULLER, P, KELLER, M, WENG, WM, QUANDT, J, Arnold, Walter, and Pühler, Alfred. “GENETIC-ANALYSIS OF THE RHIZOBIUM-MELILOTI EXOYFQ OPERON - EXOY IS HOMOLOGOUS TO SUGAR TRANSFERASES AND EXOQ REPRESENTS A TRANSMEMBRANE PROTEIN”. MOLECULAR PLANT-MICROBE INTERACTIONS 6.1 (1993): 55-65.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1644293QUANDT, HJ, Pühler, Alfred, and BROER, I. “TRANSGENIC ROOT-NODULES OF VICIA-HIRSUTA - A FAST AND EFFICIENT SYSTEM FOR THE STUDY OF GENE-EXPRESSION IN INDETERMINATE-TYPE NODULES”. MOLECULAR PLANT-MICROBE INTERACTIONS 6.6 (1993): 699-706.PUB | DOI | WoS
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1644806KOPLIN, R, WANG, G, HOTTE, B, PRIEFER, UB, and Pühler, Alfred. “A 3.9-KB DNA REGION OF XANTHOMONAS-CAMPESTRIS PV CAMPESTRIS THAT IS NECESSARY FOR LIPOPOLYSACCHARIDE PRODUCTION ENCODES A SET OF ENZYMES INVOLVED IN THE SYNTHESIS OF DTDP-RHAMNOSE”. JOURNAL OF BACTERIOLOGY 175.24 (1993): 7786-7792.PUB | WoS | PubMed | Europe PMC | GenBank
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1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1646505MASEPOHL, B, WITTY, JF, RIEDEL, KU, KLIPP, W, and Pühler, Alfred. “RHIZOBIUM-MELILOTI MUTANTS DEFECTIVE IN SYMBIOTIC NITROGEN-FIXATION AFFECT THE OXYGEN GRADIENT IN ALFALFA (MEDICAGO-SATIVA) ROOT-NODULES”. JOURNAL OF EXPERIMENTAL BOTANY 44.2 (1993): 419-426.PUB | DOI | WoS
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1648334ROSSOL, I, and Pühler, Alfred. “The Corynebacterium glutamicum aecD gene encodes a C-S lyase with alpha, beta-elimination activity that degrades aminoethylcysteine”. J Bacteriol 174.9 (1992): 2968-2977.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629777Selbitschka, Werner, Pühler, Alfred, and Simon, R. “The construction of recA-deficient Rhizobium meliloti and R. leguminosarum strains marked with gusA or luc cassettes for use in risk-assessment studies”. MOLECULAR ECOLOGY 1.1 (1992): 9-19.PUB | DOI | WoS
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629585QUANDT, HJ, BROER, I, and Pühler, Alfred. “TISSUE-SPECIFIC ACTIVITY AND LIGHT-DEPENDENT REGULATION OF A SOYBEAN RBCS PROMOTER IN TRANSGENIC TOBACCO PLANTS MONITORED WITH THE FIREFLY LUCIFERASE GENE”. PLANT SCIENCE 82.1 (1992): 59-70.PUB | DOI | WoS
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1647506Lagares, A., Caetano-Anollés, G., Niehaus, Karsten, Lorenzen, J., Ljunggren, H. D., Pühler, Alfred, and Favelukes, G. “A Rhizobium meliloti lipopolysaccharide mutant altered in competitiveness for nodulation of alfalfa”. Journal of Bacteriology 174.18 (1992): 5941-5952.PUB | DOI | WoS | PubMed | Europe PMC
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1646490QUANDT, J, HILLEMANN, A, Niehaus, Karsten, Arnold, Walter, and Pühler, Alfred. “AN OSMOREVERTANT OF A RHIZOBIUM-MELILOTI NDVB DELETION MUTANT FORMS INFECTION THREADS BUT IS DEFECTIVE IN BACTEROID DEVELOPMENT”. MOLECULAR PLANT-MICROBE INTERACTIONS 5.5 (1992): 420-427.PUB | DOI | WoS
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1648216MASEPOHL, B, KUTSCHE, M, RIEDEL, KU, SCHMEHL, M, KLIPP, W, and Pühler, Alfred. “FUNCTIONAL-ANALYSIS OF THE CYSTEINE MOTIFS IN THE FERREDOXIN-LIKE PROTEIN FDXN OF RHIZOBIUM-MELILOTI INVOLVED IN SYMBIOTIC NITROGEN-FIXATION”. MOLECULAR & GENERAL GENETICS 233.1-2 (1992): 33-41.PUB | DOI | WoS | PubMed | Europe PMC
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1992 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1647768de Philip, P, BOISTARD, P, Schlüter, Andreas, Patschkowski, Thomas, PRIEFER, UB, OGARA, F, BOESTEN, B, NOONAN, B, and Pühler, Alfred. “Developmental and metabolic regulation of nitrogen-fixation gene expression in Rhizobium meliloti”. Canadian Journal of Microbiology. NATL RESEARCH COUNCIL CANADA, 1992.Vol. 38. CANADIAN JOURNAL OF MICROBIOLOGY. 467-474.PUB | DOI | WoS
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1647461KREY, R, Pühler, Alfred, and KLIPP, W. “A DEFINED AMINO-ACID EXCHANGE CLOSE TO THE PUTATIVE NUCLEOTIDE BINDING-SITE IS RESPONSIBLE FOR AN OXYGEN-TOLERANT VARIANT OF THE RHIZOBIUM-MELILOTI NIFA PROTEIN”. MOLECULAR & GENERAL GENETICS 234.3 (1992): 433-441.PUB | DOI | WoS | PubMed | Europe PMC
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1648433DROGE, W, BROER, I, and Pühler, Alfred. “TRANSGENIC PLANTS CONTAINING THE PHOSPHINOTHRICIN-N-ACETYLTRANSFERASE GENE METABOLIZE THE HERBICIDE L-PHOSPHINOTHRICIN (GLUFOSINATE) DIFFERENTLY FROM UNTRANSFORMED PLANTS”. PLANTA 187.1 (1992): 142-151.PUB | WoS | PubMed | Europe PMC
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1647665Jäger, W, Schäfer, A, Pühler, Alfred, Labes, G, and Wohlleben, W. “Expression of the Bacillus subtilis sacB gene leads to sucrose sensitivity in the gram-positive bacterium Corynebacterium glutamicum but not in Streptomyces lividans”. JOURNAL OF BACTERIOLOGY 174.16 (1992): 5462-5465.PUB | WoS | PubMed | Europe PMC
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1647778RIEDEL, KU, MASEPOHL, B, KLIPP, W, and Pühler, Alfred. “Synthesis of the ferredoxin-like protein FdxN from Rhizobium meliloti bacteroids as a fusion protein in Escherichia coli”. Canadian Journal of Microbiology 38.6 (1992): 534-540.PUB | DOI | WoS | PubMed | Europe PMC
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629761KOPLIN, R, Arnold, Walter, HOTTE, B, SIMON, R, WANG, G, and Pühler, Alfred. “GENETICS OF XANTHAN PRODUCTION IN XANTHOMONAS-CAMPESTRIS - THE XANA AND XANB GENES ARE INVOLVED IN UDP-GLUCOSE AND GDP-MANNOSE BIOSYNTHESIS”. JOURNAL OF BACTERIOLOGY 174.1 (1992): 191-199.PUB | WoS | PubMed | Europe PMC | GenBank
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1647147WALTER, C, BROER, I, HILLEMANN, D, and Pühler, Alfred. “HIGH-FREQUENCY, HEAT TREATMENT-INDUCED INACTIVATION OF THE PHOSPHINOTHRICIN RESISTANCE GENE IN TRANSGENIC SINGLE CELL-SUSPENSION CULTURES OF MEDICAGO-SATIVA”. MOLECULAR & GENERAL GENETICS 235.2-3 (1992): 189-196.PUB | DOI | WoS | PubMed | Europe PMC
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1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1648018Arnold, Walter, KELLER, M, BECKER, A, ROXLAU, A, Niehaus, Karsten, QUANDT, J, WENG, WM, and Pühler, Alfred. “THE SURFACE POLYSACCHARIDES OF RHIZOBIUM-MELILOTI AND THEIR ROLE IN FORMING N-2-FIXING ALFALFA NODULES”. ENDOCYTOBIOSIS AND CELL RESEARCH 8.2-3 (1992): 209-212.PUB | WoS
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1649411Selbitschka, Werner, Arnold, Walter, PRIEFER, UB, ROTTSCHAFER, T, SCHMIDT, M, SIMON, R, and Pühler, Alfred. “CHARACTERIZATION OF RECA GENES AND RECA MUTANTS OF RHIZOBIUM-MELILOTI AND RHIZOBIUM-LEGUMINOSARUM BIOVAR VICIAE”. MOLECULAR & GENERAL GENETICS 229.1 (1991): 86-95.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1649702Schrumpf, B., Schwarzer, A., Kalinowski, Jörn, Pühler, Alfred, Eggeling, L., and Sahm, H. “A functionally split pathway for lysine synthesis in Corynebacterium glutamicium”. Journal of Bacteriology 173.14 (1991): 4510-4516.PUB | DOI | WoS | PubMed | Europe PMC
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1650416Bräu, B., Hilgenfeld, R., Schlingmann, M., Marquardt, R., Birr, E., Wohlleben, Wolfgang, Aufderheide, K., and Pühler, Alfred. “Increased yield of a lysozyme after self-cloning of the gene in Streptomyces coelicolor "Müller"”. Applied Microbiology and Biotechnology 34.4 (1991): 481-487.PUB | WoS | PubMed | Europe PMC
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1649978Kalinowski, Jörn, Cremer, J., Bachmann, B., Eggeling, L., Sahm, H., and Pühler, Alfred. “Genetic and biochemical analysis of the aspartokinase from Corynebacterium glutamicum”. MOLECULAR MICROBIOLOGY 5.5 (1991): 1197-1204.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1649848BUENDIA, AM, ENENKEL, B, KOPLIN, R, Niehaus, Karsten, Arnold, Walter, and Pühler, Alfred. “THE RHIZOBIUM-MELILOTI EXOZL EXOB FRAGMENT OF MEGAPLASMID-2 - EXOB FUNCTIONS AS A UDP-GLUCOSE 4-EPIMERASE AND EXOZ SHOWS HOMOLOGY TO NODX OF RHIZOBIUM-LEGUMINOSARUM BIOVAR VICIAE STRAIN TOM”. MOLECULAR MICROBIOLOGY 5.6 (1991): 1519-1530.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1650198ALIJAH, R, DORENDORF, J, TALAY, S, Pühler, Alfred, and WOHLLEBEN, W. “GENETIC-ANALYSIS OF THE PHOSPHINOTHRICIN-TRIPEPTIDE BIOSYNTHETIC-PATHWAY OF STREPTOMYCES-VIRIDOCHROMOGENES TU494”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 34.6 (1991): 749-755.PUB | WoS | PubMed | Europe PMC
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1648831Seep-Feldhaus, A. H., Kalinowski, Jörn, and Pühler, Alfred. “Molecular analysis of the Corynebacterium glutamicum lysl gene involved in lysine uptake”. MOLECULAR MICROBIOLOGY 5.12 (1991): 2995-3005.PUB | DOI | WoS | PubMed | Europe PMC
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1648921Sonnen, Hans, Thierbach, Georg, Kautz, Sabine, Kalinowski, Jörn, Schneider, Jörg, Pühler, Alfred, and Kutzner, Hans J. “Characterization of pGA1, a new plasmid from Corynebacterium glutamicum LP-6”. Gene 107.1 (1991): 69-74.PUB | DOI | WoS | PubMed | Europe PMC
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773962
Hillemann, Doris, Pühler, Alfred, and Wohlleben, Wolfgang. “Gene disruption and gene replacement in Streptomyces via single stranded DNA transformation of integration vectors”. Nucleic Acids Research 19.4 (1991): 727-731.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629878SCHWARZER, A, and Pühler, Alfred. “MANIPULATION OF CORYNEBACTERIUM-GLUTAMICUM BY GENE DISRUPTION AND REPLACEMENT”. BIO-TECHNOLOGY 9.1 (1991): 84-87.PUB | DOI | WoS | PubMed | Europe PMC
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1651130PRETORIUSGUTH, IM, Pühler, Alfred, and SIMON, R. “CONJUGAL TRANSFER OF MEGAPLASMID-2 BETWEEN RHIZOBIUM-MELILOTI STRAINS IN ALFALFA NODULES”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 56.8 (1990): 2354-2359.PUB | WoS | PubMed | Europe PMC
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1629917Kalinowski, Jörn, Bachmann, B., Thierbach, G., and Pühler, Alfred. “Aspartokinase genes lysC alpha and lysC beta overlap and are adjacent to the aspartate beta-semialdehyde dehydrogenase gene asd in Corynebacterium glutamicum”. MOLECULAR & GENERAL GENETICS 224.3 (1990): 317-324.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1651903Kapp, D, Niehaus, Karsten, Quandt, J, Muller, P, and Pühler, Alfred. “Cooperative Action of Rhizobium meliloti Nodulation and Infection Mutants during the Process of Forming Mixed Infected Alfalfa Nodules.”. PLANT CELL 2.2 (1990): 139-151.PUB | DOI | WoS | PubMed | Europe PMC
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1651306LABES, M, Pühler, Alfred, and SIMON, R. “A NEW FAMILY OF RSF1010-DERIVED EXPRESSION AND LAC-FUSION BROAD-HOST-RANGE VECTORS FOR GRAM-NEGATIVE BACTERIA”. GENE 89.1 (1990): 37-46.PUB | DOI | WoS | PubMed | Europe PMC
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1652001Thierbach, G, Kalinowski, Jörn, Bachmann, B, and Pühler, Alfred. “Cloning of a DNA fragment from Corynebacterium glutamicum conferring aminoethyl cysteine resistance and feedback resistance to aspartokinase.”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 32.4 (1990): 443-448.PUB | DOI | WoS | PubMed | Europe PMC
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1668756Colonna-Romano, S., Arnold, Walter, Schlüter, Andreas, Boistard, P., Pühler, Alfred, and Priefer, U. B. “An Fnr-like protein encoded in Rhizobium leguminosarum biovar viciae shows structural and functional homology to Rhizobium meliloti FixK.”. Mol Gen Genet 223.1 (1990): 138-147.PUB | DOI | WoS | PubMed | Europe PMC
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1650905Behrmann, I., Hillemann, D., Pühler, Alfred, Strauch, E., and Wohlleben, W. “OVEREXPRESSION OF A STREPTOMYCES-VIRIDOCHROMOGENES GENE (GLNII) ENCODING A GLUTAMINE-SYNTHETASE SIMILAR TO THOSE OF EUKARYOTES CONFERS RESISTANCE AGAINST THE ANTIBIOTIC PHOSPHINOTHRICYL-ALANYL-ALANINE”. JOURNAL OF BACTERIOLOGY 172.9 (1990): 5326-5334.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1651624HOTTE, B, RATHARNOLD, I, Pühler, Alfred, and SIMON, R. “CLONING AND ANALYSIS OF A 35.3-KILOBASE DNA REGION INVOLVED IN EXOPOLYSACCHARIDE PRODUCTION BY XANTHOMONAS-CAMPESTRIS PV CAMPESTRIS”. JOURNAL OF BACTERIOLOGY 172.5 (1990): 2804-2807.PUB | WoS | PubMed | Europe PMC
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1651883Schäfer, A, Kalinowski, Jörn, Simon, R, Seep-Feldhaus, A. H., and Pühler, Alfred. “High-frequency conjugal plasmid transfer from gram-negative Escherichia coli to various gram-positive coryneform bacteria.”. JOURNAL OF BACTERIOLOGY 172.3 (1990): 1663-1666.PUB | DOI | WoS | PubMed | Europe PMC
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1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1652424Engelke, T., Jording, Doris, Kapp, D., and Pühler, Alfred. “IDENTIFICATION AND SEQUENCE-ANALYSIS OF THE RHIZOBIUM-MELILOTI DCTA GENE ENCODING THE C-4-DICARBOXYLATE CARRIER”. JOURNAL OF BACTERIOLOGY 171.10 (1989): 5551-5560.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1652943Hynes, M. F., Quandt, J., O'Connell, M. P., and Pühler, Alfred. “Direct selection for curing and deletion of Rhizobium plasmids using transposons carrying the Bacillus subtilis sacB gene”. Gene 78.1 (1989): 111-120.PUB | DOI | WoS | PubMed | Europe PMC
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1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1652907PRIEFER, UB, Kalinowski, Jörn, RUGER, B, HEUMANN, W, and Pühler, Alfred. “ISR1, A TRANSPOSABLE DNA-SEQUENCE RESIDENT IN RHIZOBIUM CLASS-IV STRAINS, SHOWS STRUCTURAL CHARACTERISTICS OF CLASSICAL INSERTION ELEMENTS”. PLASMID 21.2 (1989): 120-128.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1653087Klipp, W., Reilander, H., Schlüter, Andreas, Krey, R., and Pühler, Alfred. “The Rhizobium meliloti fdxN gene encoding a ferredoxin-like protein is necessary for nitrogen fixation and is cotranscribed with nifA and nifB”. MOLECULAR & GENERAL GENETICS 216.2-3 (1989): 293-302.PUB | DOI | WoS | PubMed | Europe PMC
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1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1652271MUTH, G, NUSSBAUMER, B, WOHLLEBEN, W, and Pühler, Alfred. “A VECTOR SYSTEM WITH TEMPERATURE-SENSITIVE REPLICATION FOR GENE DISRUPTION AND MUTATIONAL CLONING IN STREPTOMYCETES”. MOLECULAR & GENERAL GENETICS 219.3 (1989): 341-348.PUB | DOI | WoS
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1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1653076MORENO-VIVIAN, C, HENNECKE, S, Pühler, Alfred, and KLIPP, W. “OPEN READING FRAME-5 (ORF5), ENCODING A FERREDOXIN-LIKE PROTEIN, AND NIFQ ARE COTRANSCRIBED WITH NIFE, NIFN, NIFX, AND ORF4 IN RHODOBACTER-CAPSULATUS”. JOURNAL OF BACTERIOLOGY 171.5 (1989): 2591-2598.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1653575Wohlleben, W., Arnold, Walter, BROER, I., Hillemann, D., Strauch, E., and Pühler, Alfred. “NUCLEOTIDE-SEQUENCE OF THE PHOSPHINOTHRICIN N-ACETYLTRANSFERASE GENE FROM STREPTOMYCES-VIRIDOCHROMOGENES-TU494 AND ITS EXPRESSION IN NICOTIANA-TABACUM”. GENE 70.1 (1988): 25-37.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654509MUTH, G, WOHLLEBEN, W, and Pühler, Alfred. “THE MINIMAL REPLICON OF THE STREPTOMYCES-GHANAENSIS PLASMID PSG5 IDENTIFIED BY SUBCLONING AND TN5 MUTAGENESIS”. MOLECULAR & GENERAL GENETICS 211.3 (1988): 424-429.PUB | DOI | WoS | PubMed | Europe PMC
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1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654467Strrauch, E., Wohlleben, W., and Pühler, Alfred. “Cloning of a Phosphinothricin N-Acetyltransferase Gene from Streptomyces-Viridochromogenes TU494 and its Expression in Streptomyces-Lividans and Escherichia-Coli”. Gene 63.1 (1988): 65-74.PUB | DOI | WoS | PubMed | Europe PMC
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1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654642MULLER, P, HYNES, M, KAPP, D, Niehaus, Karsten, and Pühler, Alfred. “2 CLASSES OF RHIZOBIUM-MELILOTI INFECTION MUTANTS DIFFER IN EXOPOLYSACCHARIDE PRODUCTION AND IN COINOCULATION PROPERTIES WITH NODULATION MUTANTS”. MOLECULAR & GENERAL GENETICS 211.1 (1988): 17-26.PUB | DOI | WoS
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1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654396Masepohl, B., Klipp, W., and Pühler, Alfred. “GENETIC-CHARACTERIZATION AND SEQUENCE-ANALYSIS OF THE DUPLICATED NIFA-NIFB GENE REGION OF RHODOBACTER-CAPSULATUS”. MOLECULAR & GENERAL GENETICS 212.1 (1988): 27-37.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654606KLIPP, W, MASEPOHL, B, and Pühler, Alfred. “IDENTIFICATION AND MAPPING OF NITROGEN-FIXATION GENES OF RHODOBACTER-CAPSULATUS - DUPLICATION OF A NIFA-NIFB REGION”. JOURNAL OF BACTERIOLOGY 170.2 (1988): 693-699.PUB | DOI | WoS | PubMed | Europe PMC
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1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1653687Arnold, Walter, RUMP, A, KLIPP, W, PRIEFER, UB, and Pühler, Alfred. “NUCLEOTIDE-SEQUENCE OF A 24,206-BASE-PAIR DNA FRAGMENT CARRYING THE ENTIRE NITROGEN-FIXATION GENE-CLUSTER OF KLEBSIELLA-PNEUMONIAE”. JOURNAL OF MOLECULAR BIOLOGY 203.3 (1988): 715-738.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375969Colonna-Romano, S, Riccio, A, Guida, M, Defez, R, Lamberti, A, Iaccarino, M, Arnold, Walter, Priefer, U, and Pühler, Alfred. “Tight linkage of glnA and a putative regulatory gene in Rhizobium leguminosarum”. Nucleic Acids Research 15.5 (1987): 1951-1964.PUB | DOI | WoS | PubMed | Europe PMC
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654754OCONNELL, MP, HYNES, MF, and Pühler, Alfred. “INCOMPATIBILITY BETWEEN A RHIZOBIUM SYM PLASMID AND A RI PLASMID OF AGROBACTERIUM”. PLASMID 18.2 (1987): 156-163.PUB | DOI | WoS | PubMed | Europe PMC
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654975WOHLLEBEN, W, and Pühler, Alfred. “THE STREPTOMYCES-GHANAENSIS LOW COPY PLASMID PSG2 AND ITS USE FOR VECTOR CONSTRUCTION”. ARCHIVES OF MICROBIOLOGY 148.4 (1987): 298-304.PUB | DOI | WoS | PubMed | Europe PMC
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654760Aguilar, O.M., Reilander, H., Arnold, Walter, and Pühler, Alfred. “RHIZOBIUM-MELILOTI-NIFN (FIXF) GENE IS PART OF AN OPERON REGULATED BY A NIFA-DEPENDENT PROMOTER AND CODES FOR A POLYPEPTIDE HOMOLOGOUS TO THE NIFK GENE-PRODUCT”. JOURNAL OF BACTERIOLOGY 169.12 (1987): 5393-5400.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773940
Grönger, Petra, Manian, Sundaram S., Reiländer, Helmut, O´Connell, Michael, Priefer, Ursula B., and Pühler, Alfred. “Organization and partial sequence of a DNA region of the Rhizobium leguminosarum symbiotic plasmid pRL6JI containing the genes fixABC, nifA, nifB and a novel open reading frame”. Nucleic Acids Research 15.1 (1987): 31-49.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654320STRAUCH, E, WOHLLEBEN, W, and Pühler, Alfred. “DEVELOPMENT OF A PLASMID-CLONING SYSTEM FOR STREPTOMYCES-VIRIDOCHROMOGENES TU494”. JOURNAL OF BASIC MICROBIOLOGY 27.8 (1987): 449-455.PUB | DOI | WoS | PubMed | Europe PMC
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1654923KORTLUKE, C, HOGREFE, C, EBERZ, G, Pühler, Alfred, and FRIEDRICH, B. “GENES OF LITHOAUTOTROPHIC METABOLISM ARE CLUSTERED ON THE MEGAPLASMID PHG1 IN ALCALIGENES-EUTROPHUS”. MOLECULAR & GENERAL GENETICS 210.1 (1987): 122-128.PUB | DOI | WoS
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1655793BURKARDT, B, SCHILLIK, D, and Pühler, Alfred. “PHYSICAL CHARACTERIZATION OF RHIZOBIUM-MELILOTI MEGAPLASMIDS”. PLASMID 17.1 (1987): 13-25.PUB | DOI | WoS | PubMed | Europe PMC
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773947
Colonna-Romano, S., Riccio, A., Guida, M., Defez, R., Lamberti, A., Iaccarino, M., Arnold, Walter, Priefer, Ursula B., and Pühler, Alfred. “Tight linkage of ginA and a putative regulatory gene in Rhizobium leguminosarum”. Nucleic Acids Research 15.5 (1987): 1951-1964.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1657060Simon, R., O'Connell, M., Labes, M., and Pühler, Alfred. “Plasmid vectors for the genetic analysis and manipulation of rhizobia and other gram-negative bacteria”. METHODS IN ENZYMOLOGY 118 (1986): 640-659.PUB | WoS | PubMed | Europe PMC
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1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1656862HYNES, MF, SIMON, R, MULLER, P, Niehaus, Karsten, LABES, M, and Pühler, Alfred. “THE 2 MEGAPLASMIDS OF RHIZOBIUM-MELILOTI ARE INVOLVED IN THE EFFECTIVE NODULATION OF ALFALFA”. MOLECULAR & GENERAL GENETICS 202.3 (1986): 356-362.PUB | DOI | WoS
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1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1656975Krishnapillai, V., Pühler, Alfred, and Lanka, E. “Molecular cloning into Tn5 and integration in the Pseudomonas aeruginosa chromosome: a tool for heterologous gene expression”. JOURNAL OF GENERAL MICROBIOLOGY 132 (1986): 707-715.PUB | WoS | PubMed | Europe PMC
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1985 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1657467Aguilar, O.M., Kapp, D., and Pühler, Alfred. “Characterization of a Rhizobium meliloti fixation gene (fixF) located near the common nodulation region”. Journal of Bacteriology 164.1 (1985): 245-254.PUB | DOI | WoS | PubMed | Europe PMC
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1985 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1657761Priefer, U. B., Simon, R., and Pühler, Alfred. “Extension of the host range of Escherichia coli vectors by incorporation of RSF1010 replication and mobilization functions”. JOURNAL OF BACTERIOLOGY 163.1 (1985): 324-330.PUB | DOI | WoS | PubMed | Europe PMC
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1985 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1657375WEBER, G, REILANDER, H, and Pühler, Alfred. “MAPPING AND EXPRESSION OF A REGULATORY NITROGEN-FIXATION GENE (FIXD) OF RHIZOBIUM-MELILOTI”. EMBO JOURNAL 4.11 (1985): 2751-2756.PUB | DOI | WoS | PubMed | Europe PMC
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1985 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1657989Hynes, M. F., Simon, R., and Pühler, Alfred. “The development of plasmid-free strains of Agrobacterium tumefaciens by using incompatibility with a Rhizobium meliloti plasmid to eliminate pAtC58”. PLASMID 13.2 (1985): 99-105.PUB | DOI | WoS | PubMed | Europe PMC
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1984 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1658523Anné, J., Wohlleben, Wolfgang, Burkardt, Hans Joachim, Springer, R., and Pühler, Alfred. “Morphological and molecular characterization of several actinophages isolated from soil which lyse Streptomyces cattleya or S. venezuelae”. Journal of General Microbiology 130.OCT (1984): 2639-2649.PUB | WoS | PubMed | Europe PMC
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1983 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1659603Riess, G., Masepohl, B., and Pühler, Alfred. “Analysis of IS21-mediated mobilization of plasmid pACYC184 by R68.45 in Escherichia coli”. Plasmid 10.2 (1983): 111-118.PUB | DOI | WoS | PubMed | Europe PMC
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1981 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1661655Priefer, U.B., Burkardt, Hans Joachim, Klipp, W., and Pühler, Alfred. “ISR1 - AN INSERTION ELEMENT ISOLATED FROM THE SOIL BACTERIUM RHIZOBIUM-LUPINI”. COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 45 Pt 1 (1981): 87-91.PUB | DOI | WoS | PubMed | Europe PMC
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1981 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092504Schmitt, R., Altenbuchner, J., Wiebauer, K., Arnold, Walter, Pühler, Alfred, and Schöffl, F. “Basis of transposition and gene amplification by Tn1721 and related tetracycline-resistance transposons”. Cold Spring Harb Symp Quant Biol 45 Pt 1 (1981): 59-64.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1981 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092521Schöffl, F, Arnold, Walter, Pühler, Alfred, Altenbuchner, J, and Schmitt, R. “The tetracycline resistance transposons Tn1721 and Tn1771 have three 38-base-pair repeats and generate five-base-pair direct repeats”. Mol Gen Genet 181.1 (1981): 87-94.PUB | DOI | WoS | PubMed | Europe PMC | GenBank
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1981 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773924
Schröder, Joachim, Hillebrand, Annette, Klipp, Werner, and Pühler, Alfred. “Expression of plant tumor-specific proteins in minicells of Escherichia coli: a fusion protein of lysopine dehydrogenase with chloramphenicol acetyltransferase”. Nucleic Acids Research 9.20 (1981): 5187-5202.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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1980 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092533Heilmann, Heidrun, Reeve, John N., and Pühler, Alfred. “Identification of the repressor and repressor bypass (antirepressor) polypeptides of bacteriophage P1 synthesized in infected minicells”. Mol Gen Genet 178.1 (1980): 149-154.PUB | DOI | WoS | PubMed | Europe PMC
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1980 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092527Burkardt, Hans Joachim, Pühler, Alfred, and Wohlleben, Wolfgang. “Adenine + thymine content of different genes located on the broad host range plasmid RP4”. J Gen Microbiol 117.1 (1980): 722-722.PUB | WoS | PubMed | Europe PMC
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1980 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1662080Riess, G., Holloway, B. W., and Pühler, Alfred. “R68.45, a plasmid with chromosome mobilizing ability (Cma) carries a tandem duplication”. Genetical Research 36.1 (1980): 99-&.PUB | WoS | PubMed | Europe PMC
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1980 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092531Pühler, Alfred. “[Applied gene technology using biological N2-fixation for an example (author's transl)]”. Arzneimittelforschung 30.3a (1980): 1528.PUB | WoS | PubMed | Europe PMC
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1980 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1662006Heilmann, Heidrun, Burkardt, Hans Joachim, Pühler, Alfred, and Reeve, J. N. “Transposon mutagenesis of the gene encoding the bacteriophage P1 restriction endonuclease. Co-linearity of the gene and gene product”. Journal of Molecular Biology 144.3 (1980): 387-396.PUB | DOI | WoS | PubMed | Europe PMC
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1979 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092540Pühler, Alfred, Burkardt, Hans Joachim, and Klipp, W. “Cloning of the entire region for nitrogen fixation from Klebsiella pneumoniae on a multicopy plasmid vehicle in Escherichia coli”. Mol Gen Genet 176.1 (1979): 17-24.PUB | DOI | WoS | PubMed | Europe PMC
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1979 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092548Schöffl, F., and Pühler, Alfred. “Intramolecular amplification of the tetracycline resistance determinant of transposon Tn1771 in Escherichia coli”. Genet Res 33.03 (1979): 253.PUB | DOI | WoS | PubMed | Europe PMC
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1979 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092537Schöffl, F., and Pühler, Alfred. “The plasmid system of Escherichia coli strain UR12644: identification and molecular characteristics of transposons involved in the generation of endogenous R-plasmids”. Genet Res 34.03 (1979): 287.PUB | DOI | WoS | PubMed | Europe PMC
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1979 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092544Burkardt, Hans Joachim, Riess, G., and Pühler, Alfred. “Relationship of group P1 plasmids revealed by heteroduplex experiments: RP1, RP4, R68 and RK2 are identical”. J Gen Microbiol 114.2 (1979): 341-348.PUB | DOI | WoS | PubMed | Europe PMC
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1979 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092551Pühler, Alfred, Burkardt, Hans Joachim, Cannon, F. C., and Wohlleben, Wolfgang. “Spontaneous degradation of pRD1 DNA into unique size classes is recA dependent”. Mol Gen Genet 171.1 (1979): 1-6.PUB | DOI | WoS | PubMed | Europe PMC
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1978 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092559Burkardt, Hans Joachim, Mattes, R., Pühler, Alfred, and Heumann, W. “Electron microscopy and computerized evaluation of some partially denatured group P resistance plasmids”. J Gen Microbiol 105.1 (1978): 51-62.PUB | DOI | WoS | PubMed | Europe PMC
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1978 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092556Pühler, Alfred, and Burkardt, Hans Joachim. “Fertility inhibition in Rhizobium lupini by the resistance plasmid RP4”. Mol Gen Genet 162.2 (1978): 163-171.PUB | DOI | WoS | PubMed | Europe PMC
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1976 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092564Traub, W. H., Kleber, I., Pühler, Alfred, and Burkardt, H. J. “Characterization of a nosocomially significant, multiple drug-resistant strain of Serratia marcescens”. Chemotherapy 22.5 (1976): 297-312.PUB | DOI | WoS | PubMed | Europe PMC
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1975 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092593Mayer, F., Mazaitis, A. J., and Pühler, Alfred. “Electron microscopy of simian virus 40 DNA configuration under denaturation conditions”. J Virol 15.3 (1975): 585-598.PUB | DOI | WoS | PubMed | Europe PMC
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1975 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092569Bernard, U, Pühler, Alfred, and Kuntzel, H. “Physical map of circular mitochondrial DNA from Neurospora crassa”. FEBS Lett 60.1 (1975): 119-121.PUB | DOI | WoS | PubMed | Europe PMC
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1975 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092573Bernard, U., Pühler, Alfred, Mayer, F., and Kuntzel, H. “Denaturation map of the circular mitochondrial genome of Neurospora crassa”. Biochim Biophys Acta 402.2 (1975): 270-278.PUB | DOI | WoS | PubMed | Europe PMC
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1974 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092583Jessberger, B., Pühler, Alfred, and Heumann, W. “[Sequential mutagenesis in Rhizobium lupini]”. Zentralbl Bakteriol Orig A 228.1 (1974): 162-167.PUB | WoS | PubMed | Europe PMC
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1974 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092578Pühler, Alfred, Burkardt, H. J., Mattes, R. E., and Heumann, W. “[Genetic studies of class P resistance factors in Rhizobium lupini]”. Zentralbl Bakteriol Orig A 228.1 (1974): e3123.PUB | WoS | PubMed | Europe PMC
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1974 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092587Schöffl, F., Wunder, M., Tucher, R., Heumann, W., and Pühler, Alfred. “[Regulation of chromosomal transfer in Rhizobium lupini]”. Zentralbl Bakteriol Orig A 228.1 (1974): e3092.PUB | WoS | PubMed | Europe PMC
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1973 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092597Heumann, W, Pühler, Alfred, and Wagner, E. “The two transfer regions of the Rhizobium lupini conjugation. II. Genetic characterization of the transferred chromosomal segments”. Mol Gen Genet 126.3 (1973): 267-274.PUB | DOI | WoS | PubMed | Europe PMC
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1972 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092604Pühler, Alfred. “[Readiness for gene transfer in the Rhizobium lupini conjugation (brief report)]”. Zentralbl Bakteriol Orig A 220.1 (1972): 343.PUB | WoS | PubMed | Europe PMC
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1972 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092601Mattes, R., and Pühler, Alfred. “[Physical method for the isolation of DNA]”. Hoppe Seylers Z Physiol Chem 353.10 (1972): 364-365.PUB | WoS | PubMed | Europe PMC
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1971 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092606Heumann, W, Pühler, Alfred, and Wagner, E. “The two transfer regions of the Rhizobium lupini conjugation. I. Fertility factor elimination and one way transfer”. Mol Gen Genet 113.4 (1971): 308-315.PUB | DOI | WoS | PubMed | Europe PMC