Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora

Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, et al. (2005)
Journal of Bacteriology 187(13): 4671-4682.

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Abstract / Bemerkung
Corynebacterium jeikeium is a "lipophilic" and multidrug-resistant bacterial species of the human skin flora that has been recognized with increasing frequency as a serious nosocomial pathogen. Here we report the genome sequence of the clinical isolate C. jeikeium K411, which was initially recovered from the axilla of a bone marrow transplant patient. The genome of C. jeikeium K411 consists of a circular chromosome of 2,462,499 bp and the 14,323-bp bacteriocin-producing plasmid pKW4. The chromosome of C. jeikeium K411 contains 2,104 predicted coding sequences, 52% of which were considered to be orthologous with genes in the Corynebacterium glutamicum, Corynebacterium efficiens, and Corynebacterium diphtheriae genomes. These genes apparently represent the chromosomal backbone that is conserved between the four corynebacteria. Among the genes that lack an ortholog in the known corynebacterial genomes, many are located close to transposable elements or revealed an atypical G+C content, indicating that horizontal gene transfer played an important role in the acquisition of genes involved in iron and manganese homeostasis, in multidrug resistance, in bacterium-host interaction, and in virulence. Metabolic analyses of the genome sequence indicated that the "lipophilic" phenotype of C jeikeium most likely originates from the absence of fatty acid synthase and thus represents a fatty acid auxotrophy. Accordingly, both the complete gene repertoire and the deduced lifestyle of C. jeikeium K411 largely reflect the strict dependence of growth on the presence of exogenous fatty acids. The predicted virulence factors of C. jeikeium K411 are apparently involved in ensuring the availability of exogenous fatty acids by damaging the host tissue.
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Journal of Bacteriology
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187
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13
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4671-4682
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Tauch A, Kaiser O, Hain T, et al. Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. Journal of Bacteriology. 2005;187(13):4671-4682.
Tauch, A., Kaiser, O., Hain, T., Goesmann, A., Weisshaar, B., Albersmeier, A., Bekel, T., et al. (2005). Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. Journal of Bacteriology, 187(13), 4671-4682. doi:10.1128/JB.187.13.4671-4682.2005
Tauch, A., Kaiser, O., Hain, T., Goesmann, A., Weisshaar, B., Albersmeier, A., Bekel, T., Bischoff, N., Brune, I., Chakraborty, T., et al. (2005). Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. Journal of Bacteriology 187, 4671-4682.
Tauch, A., et al., 2005. Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. Journal of Bacteriology, 187(13), p 4671-4682.
A. Tauch, et al., “Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora”, Journal of Bacteriology, vol. 187, 2005, pp. 4671-4682.
Tauch, A., Kaiser, O., Hain, T., Goesmann, A., Weisshaar, B., Albersmeier, A., Bekel, T., Bischoff, N., Brune, I., Chakraborty, T., Kalinowski, J., Meyer, F., Rupp, O., Schneiker-Bekel, S., Viehöver, P., Pühler, A.: Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. Journal of Bacteriology. 187, 4671-4682 (2005).
Tauch, Andreas, Kaiser, Olaf, Hain, Torsten, Goesmann, Alexander, Weisshaar, Bernd, Albersmeier, Andreas, Bekel, Thomas, Bischoff, Nicole, Brune, Iris, Chakraborty, Trinad, Kalinowski, Jörn, Meyer, Folker, Rupp, Oliver, Schneiker-Bekel, Susanne, Viehöver, Prisca, and Pühler, Alfred. “Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora”. Journal of Bacteriology 187.13 (2005): 4671-4682.

104 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Phylogeny Trumps Chemotaxonomy: A Case Study Involving Turicella otitidis.
Baek I, Kim M, Lee I, Na SI, Goodfellow M, Chun J., Front Microbiol 9(), 2018
PMID: 29760685
Identification and characterization of smallest pore-forming protein in the cell wall of pathogenic Corynebacterium urealyticum DSM 7109.
Abdali N, Younas F, Mafakheri S, Pothula KR, Kleinekathöfer U, Tauch A, Benz R., BMC Biochem 19(1), 2018
PMID: 29743008
Occurrence of Corynebacterium striatum as an emerging antibiotic-resistant nosocomial pathogen in a Tunisian hospital.
Alibi S, Ferjani A, Boukadida J, Cano ME, Fernández-Martínez M, Martínez-Martínez L, Navas J., Sci Rep 7(1), 2017
PMID: 28848236
Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing.
Leo S, Gaïa N, Ruppé E, Emonet S, Girard M, Lazarevic V, Schrenzel J., Int J Mol Sci 18(9), 2017
PMID: 28930150
The commensal lifestyle of Staphylococcus aureus and its interactions with the nasal microbiota.
Krismer B, Weidenmaier C, Zipperer A, Peschel A., Nat Rev Microbiol 15(11), 2017
PMID: 29021598
Chassis organism from Corynebacterium glutamicum--a top-down approach to identify and delete irrelevant gene clusters.
Unthan S, Baumgart M, Radek A, Herbst M, Siebert D, Brühl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, Krämer R, Seibold G, Frunzke J, Kalinowski J, Rückert C, Wendisch VF, Noack S., Biotechnol J 10(2), 2015
PMID: 25139579
Spatial variations in the microbial community structure and diversity of the human foot is associated with the production of odorous volatiles.
Stevens D, Cornmell R, Taylor D, Grimshaw SG, Riazanskaia S, Arnold DS, Fernstad SJ, Smith AM, Heaney LM, Reynolds JC, Thomas CL, Harker M., FEMS Microbiol Ecol 91(1), 2015
PMID: 25764539
Mapping axillary microbiota responsible for body odours using a culture-independent approach.
Troccaz M, Gaïa N, Beccucci S, Schrenzel J, Cayeux I, Starkenmann C, Lazarevic V., Microbiome 3(1), 2015
PMID: 25653852
Corynebacterium urealyticum: a comprehensive review of an understated organism.
Salem N, Salem L, Saber S, Ismail G, Bluth MH., Infect Drug Resist 8(), 2015
PMID: 26056481
AAC(3)-XI, a new aminoglycoside 3-N-acetyltransferase from Corynebacterium striatum.
Galimand M, Fishovitz J, Lambert T, Barbe V, Zajicek J, Mobashery S, Courvalin P., Antimicrob Agents Chemother 59(9), 2015
PMID: 26149994
Identification of axillary Staphylococcus sp. involved in the production of the malodorous thioalcohol 3-methyl-3-sufanylhexan-1-ol.
Bawdon D, Cox DS, Ashford D, James AG, Thomas GH., FEMS Microbiol Lett 362(16), 2015
PMID: 26163522
Immunostimulatory CpG motifs in the genomes of gut bacteria and their role in human health and disease.
Kant R, de Vos WM, Palva A, Satokari R., J Med Microbiol 63(pt 2), 2014
PMID: 24255136
Complete Genome Sequence of Corynebacterium falsenii DSM 44353 To Study the Evolution of Corynebacterium Cluster 3 Species.
Glaub A, Bomholt C, Gravermann K, Brinkrolf K, Albersmeier A, Rückert C, Tauch A., Genome Announc 2(2), 2014
PMID: 24604654
Erm(X)-mediated resistance to macrolides, lincosamides and streptogramins in Actinobaculum schaalii.
Hays C, Lienhard R, Auzou M, Barraud O, Guérin F, Ploy MC, Cattoir V., J Antimicrob Chemother 69(8), 2014
PMID: 24710027
Macrolide, lincosamide, and streptogramin B resistance in lipophilic Corynebacteria inhabiting healthy human skin.
Szemraj M, Kwaszewska A, Pawlak R, Szewczyk EM., Microb Drug Resist 20(5), 2014
PMID: 24735183
Effects of pipe materials on chlorine-resistant biofilm formation under long-term high chlorine level.
Zhu Z, Wu C, Zhong D, Yuan Y, Shan L, Zhang J., Appl Biochem Biotechnol 173(6), 2014
PMID: 24828580
Cohabitation--relationships of corynebacteria and staphylococci on human skin.
Kwaszewska A, Sobiś-Glinkowska M, Szewczyk EM., Folia Microbiol (Praha) 59(6), 2014
PMID: 24880250
Molecular bases and role of viruses in the human microbiome.
Abeles SR, Pride DT., J Mol Biol 426(23), 2014
PMID: 25020228
Whole genome sequencing indicates Corynebacterium jeikeium comprises 4 separate genomospecies and identifies a dominant genomospecies among clinical isolates.
Salipante SJ, Sengupta DJ, Cummings LA, Robinson A, Kurosawa K, Hoogestraat DR, Cookson BT., Int J Med Microbiol 304(8), 2014
PMID: 25116839
Fungi on the skin: dermatophytes and Malassezia.
White TC, Findley K, Dawson TL, Scheynius A, Boekhout T, Cuomo CA, Xu J, Saunders CW., Cold Spring Harb Perspect Med 4(8), 2014
PMID: 25085959
Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient.
Tippelt A, Albersmeier A, Brinkrolf K, Rückert C, Fernández-Natal I, Soriano F, Tauch A., Genome Announc 2(6), 2014
PMID: 25414509
Microbiological and biochemical origins of human axillary odour.
James AG, Austin CJ, Cox DS, Taylor D, Calvert R., FEMS Microbiol Ecol 83(3), 2013
PMID: 23278215
The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains.
Soares SC, Silva A, Trost E, Blom J, Ramos R, Carneiro A, Ali A, Santos AR, Pinto AC, Diniz C, Barbosa EG, Dorella FA, Aburjaile F, Rocha FS, Nascimento KK, Guimarães LC, Almeida S, Hassan SS, Bakhtiar SM, Pereira UP, Abreu VA, Schneider MP, Miyoshi A, Tauch A, Azevedo V., PLoS One 8(1), 2013
PMID: 23342011
Daily battle against body odor: towards the activity of the axillary microbiota.
Fredrich E, Barzantny H, Brune I, Tauch A., Trends Microbiol 21(6), 2013
PMID: 23566668
Genomic organisation, activity and distribution analysis of the microbial putrescine oxidase degradation pathway.
Foster A, Barnes N, Speight R, Keane MA., Syst Appl Microbiol 36(7), 2013
PMID: 23906496
Corynebacterium jeikeium jk0268 constitutes for the 40 amino acid long PorACj, which forms a homooligomeric and anion-selective cell wall channel.
Abdali N, Barth E, Norouzy A, Schulz R, Nau WM, Kleinekathöfer U, Tauch A, Benz R., PLoS One 8(10), 2013
PMID: 24116064
Microbiology of the skin and the role of biofilms in infection.
Percival SL, Emanuel C, Cutting KF, Williams DW., Int Wound J 9(1), 2012
PMID: 21973162
Corynebacterium prosthetic joint infection.
Cazanave C, Greenwood-Quaintance KE, Hanssen AD, Patel R., J Clin Microbiol 50(5), 2012
PMID: 22337986
Comparative analysis of Mycobacterium and related Actinomycetes yields insight into the evolution of Mycobacterium tuberculosis pathogenesis.
McGuire AM, Weiner B, Park ST, Wapinski I, Raman S, Dolganov G, Peterson M, Riley R, Zucker J, Abeel T, White J, Sisk P, Stolte C, Koehrsen M, Yamamoto RT, Iacobelli-Martinez M, Kidd MJ, Maer AM, Schoolnik GK, Regev A, Galagan J., BMC Genomics 13(), 2012
PMID: 22452820
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient.
Schröder J, Maus I, Meyer K, Wördemann S, Blom J, Jaenicke S, Schneider J, Trost E, Tauch A., BMC Genomics 13(), 2012
PMID: 22524407
Multiple-genome comparison reveals new loci for Mycobacterium species identification.
Dai J, Chen Y, Dean S, Morris JG, Salfinger M, Johnson JA., J Clin Microbiol 49(1), 2011
PMID: 21048007
Fatty acid biosynthesis in actinomycetes.
Gago G, Diacovich L, Arabolaza A, Tsai SC, Gramajo H., FEMS Microbiol Rev 35(3), 2011
PMID: 21204864
Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.
Ruiz JC, D'Afonseca V, Silva A, Ali A, Pinto AC, Santos AR, Rocha AA, Lopes DO, Dorella FA, Pacheco LG, Costa MP, Turk MZ, Seyffert N, Moraes PM, Soares SC, Almeida SS, Castro TL, Abreu VA, Trost E, Baumbach J, Tauch A, Schneider MP, McCulloch J, Cerdeira LT, Ramos RT, Zerlotini A, Dominitini A, Resende DM, Coser EM, Oliveira LM, Pedrosa AL, Vieira CU, Guimarães CT, Bartholomeu DC, Oliveira DM, Santos FR, Rabelo ÉM, Lobo FP, Franco GR, Costa AF, Castro IM, Dias SR, Ferro JA, Ortega JM, Paiva LV, Goulart LR, Almeida JF, Ferro MI, Carneiro NP, Falcão PR, Grynberg P, Teixeira SM, Brommonschenkel S, Oliveira SC, Meyer R, Moore RJ, Miyoshi A, Oliveira GC, Azevedo V., PLoS One 6(4), 2011
PMID: 21533164
Amino acid production from rice straw and wheat bran hydrolysates by recombinant pentose-utilizing Corynebacterium glutamicum.
Gopinath V, Meiswinkel TM, Wendisch VF, Nampoothiri KM., Appl Microbiol Biotechnol 92(5), 2011
PMID: 21796382
Survey of genome organization and gene content of Corynebacterium pseudotuberculosis.
D'Afonseca V, Prosdocimi F, Dorella FA, Pacheco LG, Moraes PM, Pena I, Ortega JM, Teixeira S, Oliveira SC, Coser EM, Oliveira LM, Corrêa de Oliveira G, Meyer R, Miyoshi A, Azevedo V., Microbiol Res 165(4), 2010
PMID: 19720513
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion.
Trost E, Götker S, Schneider J, Schneiker-Bekel S, Szczepanowski R, Tilker A, Viehoever P, Arnold W, Bekel T, Blom J, Gartemann KH, Linke B, Goesmann A, Pühler A, Shukla SK, Tauch A., BMC Genomics 11(), 2010
PMID: 20137072
Common patterns - unique features: nitrogen metabolism and regulation in Gram-positive bacteria.
Amon J, Titgemeyer F, Burkovski A., FEMS Microbiol Rev 34(4), 2010
PMID: 20337720
Corynebacterium jeikeium bacteremia in a hemodialyzed patient.
Ifantidou AM, Diamantidis MD, Tseliki G, Angelou AS, Christidou P, Papa A, Pentilas D., Int J Infect Dis 14 Suppl 3(), 2010
PMID: 20171132
A comparison of bacterial composition in diabetic ulcers and contralateral intact skin.
Gontcharova V, Youn E, Sun Y, Wolcott RD, Dowd SE., Open Microbiol J 4(), 2010
PMID: 20461221
A framework for classification of prokaryotic protein kinases.
Tyagi N, Anamika K, Srinivasan N., PLoS One 5(5), 2010
PMID: 20520783
Phosphorylation of a novel cytoskeletal protein (RsmP) regulates rod-shaped morphology in Corynebacterium glutamicum.
Fiuza M, Letek M, Leiba J, Villadangos AF, Vaquera J, Zanella-Cléon I, Mateos LM, Molle V, Gil JA., J Biol Chem 285(38), 2010
PMID: 20622015
Chemical ecology of interactions between human skin microbiota and mosquitoes.
Verhulst NO, Takken W, Dicke M, Schraa G, Smallegange RC., FEMS Microbiol Ecol 74(1), 2010
PMID: 20840217
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence.
Trost E, Ott L, Schneider J, Schröder J, Jaenicke S, Goesmann A, Husemann P, Stoye J, Dorella FA, Rocha FS, Soares Sde C, D'Afonseca V, Miyoshi A, Ruiz J, Silva A, Azevedo V, Burkovski A, Guiso N, Join-Lambert OF, Kayal S, Tauch A., BMC Genomics 11(), 2010
PMID: 21192786
The genus Dietzia: a new home for some known and emerging opportunist pathogens.
Koerner RJ, Goodfellow M, Jones AL., FEMS Immunol Med Microbiol 55(3), 2009
PMID: 19159434
Microarray studies reveal a 'differential response' to moderate or severe heat shock of the HrcA- and HspR-dependent systems in Corynebacterium glutamicum.
Barreiro C, Nakunst D, Hüser AT, de Paz HD, Kalinowski J, Martín JF., Microbiology 155(pt 2), 2009
PMID: 19202085
The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies.
Bekel T, Henckel K, Küster H, Meyer F, Mittard Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, Goesmann A., J Biotechnol 140(1-2), 2009
PMID: 19297685
Regulation of ldh expression during biotin-limited growth of Corynebacterium glutamicum.
Dietrich C, Nato A, Bost B, Le Maréchal P, Guyonvarch A., Microbiology 155(pt 4), 2009
PMID: 19332837
Identification and functional analysis of the gene cluster for L-arabinose utilization in Corynebacterium glutamicum.
Kawaguchi H, Sasaki M, Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 75(11), 2009
PMID: 19346355
Life-threatening infection caused by daptomycin-resistant Corynebacterium jeikeium in a neutropenic patient.
Schoen C, Unzicker C, Stuhler G, Elias J, Einsele H, Grigoleit GU, Abele-Horn M, Mielke S., J Clin Microbiol 47(7), 2009
PMID: 19420177
Identification of a terminal rhamnopyranosyltransferase (RptA) involved in Corynebacterium glutamicum cell wall biosynthesis.
Birch HL, Alderwick LJ, Rittmann D, Krumbach K, Etterich H, Grzegorzewicz A, McNeil MR, Eggeling L, Besra GS., J Bacteriol 191(15), 2009
PMID: 19482925
The beta-lactam-sensitive D,D-carboxypeptidase activity of Pbp4 controls the L,D and D,D transpeptidation pathways in Corynebacterium jeikeium.
Lavollay M, Arthur M, Fourgeaud M, Dubost L, Marie A, Riegel P, Gutmann L, Mainardi JL., Mol Microbiol 74(3), 2009
PMID: 19807868
Engineering of an L-arabinose metabolic pathway in Corynebacterium glutamicum.
Kawaguchi H, Sasaki M, Vertès AA, Inui M, Yukawa H., Appl Microbiol Biotechnol 77(5), 2008
PMID: 17965859
Cell growth and cell division in the rod-shaped actinomycete Corynebacterium glutamicum.
Letek M, Fiuza M, Ordóñez E, Villadangos AF, Ramos A, Mateos LM, Gil JA., Antonie Van Leeuwenhoek 94(1), 2008
PMID: 18283557
DivIVA is required for polar growth in the MreB-lacking rod-shaped actinomycete Corynebacterium glutamicum.
Letek M, Ordóñez E, Vaquera J, Margolin W, Flärdh K, Mateos LM, Gil JA., J Bacteriol 190(9), 2008
PMID: 18296522
Skin microbiota: a source of disease or defence?
Cogen AL, Nizet V, Gallo RL., Br J Dermatol 158(3), 2008
PMID: 18275522
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing.
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Götker S, Kalinowski J, Kamp PB, Lobo FP, Viehoever P, Weisshaar B, Soriano F, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18367281
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehoever P, Gartemann KH, Arnold W, Blom J, Brinkrolf K, Brune I, Götker S, Weisshaar B, Goesmann A, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18430482
Nitrogen metabolism and nitrogen control in corynebacteria: variations of a common theme.
Walter B, Hänssler E, Kalinowski J, Burkovski A., J Mol Microbiol Biotechnol 12(1-2), 2007
PMID: 17183220
Random segment deletion based on IS31831 and Cre/loxP excision system in Corynebacterium glutamicum.
Tsuge Y, Suzuki N, Inui M, Yukawa H., Appl Microbiol Biotechnol 74(6), 2007
PMID: 17221197
A proteomic study of Corynebacterium glutamicum AAA+ protease FtsH.
Lüdke A, Krämer R, Burkovski A, Schluesener D, Poetsch A., BMC Microbiol 7(), 2007
PMID: 17254330
The IclR-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum.
Brune I, Jochmann N, Brinkrolf K, Hüser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Pühler A, Tauch A., J Bacteriol 189(7), 2007
PMID: 17259312
The role of laterally transferred genes in adaptive evolution.
Marri PR, Hao W, Golding GB., BMC Evol Biol 7 Suppl 1(), 2007
PMID: 17288581
A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411.
Hansmeier N, Chao TC, Daschkey S, Müsken M, Kalinowski J, Pühler A, Tauch A., Proteomics 7(7), 2007
PMID: 17352426
Transcriptionally regulated adhA gene encodes alcohol dehydrogenase required for ethanol and n-propanol utilization in Corynebacterium glutamicum R.
Kotrbova-Kozak A, Kotrba P, Inui M, Sajdok J, Yukawa H., Appl Microbiol Biotechnol 76(6), 2007
PMID: 17646983
Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.
Ventura M, Canchaya C, Tauch A, Chandra G, Fitzgerald GF, Chater KF, van Sinderen D., Microbiol Mol Biol Rev 71(3), 2007
PMID: 17804669
CoryneCenter - an online resource for the integrated analysis of corynebacterial genome and transcriptome data.
Neuweger H, Baumbach J, Albaum S, Bekel T, Dondrup M, Hüser AT, Kalinowski J, Oehm S, Pühler A, Rahmann S, Weile J, Goesmann A., BMC Syst Biol 1(), 2007
PMID: 18034885
CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.
Baumbach J, Brinkrolf K, Czaja LF, Rahmann S, Tauch A., BMC Genomics 7(), 2006
PMID: 16478536
Engineering of a xylose metabolic pathway in Corynebacterium glutamicum.
Kawaguchi H, Vertès AA, Okino S, Inui M, Yukawa H., Appl Environ Microbiol 72(5), 2006
PMID: 16672486
Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups.
Gao B, Paramanathan R, Gupta RS., Antonie Van Leeuwenhoek 90(1), 2006
PMID: 16670965
Siderophore-mediated iron transport in Bacillus subtilis and Corynebacterium glutamicum.
Dertz EA, Stintzi A, Raymond KN., J Biol Inorg Chem 11(8), 2006
PMID: 16912897
Functional analysis of the twin-arginine translocation pathway in Corynebacterium glutamicum ATCC 13869.
Kikuchi Y, Date M, Itaya H, Matsui K, Wu LF., Appl Environ Microbiol 72(11), 2006
PMID: 16997984
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction.
Rückert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Pühler A, Kalinowski J., BMC Genomics 6(), 2005
PMID: 16159395
The secret of being cool.
Galperin MY., Environ Microbiol 7(10), 2005
PMID: 16156723
Manipulating corynebacteria, from individual genes to chromosomes.
Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 71(12), 2005
PMID: 16332735

83 References

Daten bereitgestellt von Europe PubMed Central.

Metal ion homeostasis and intracellular parasitism.
Agranoff DD, Krishna S., Mol. Microbiol. 28(3), 1998
PMID: 9632246
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ., Nucleic Acids Res. 25(17), 1997
PMID: 9254694
Bacterial iron homeostasis.
Andrews SC, Robinson AK, Rodriguez-Quinones F., FEMS Microbiol. Rev. 27(2-3), 2003
PMID: 12829269
Coryneform bacteria isolated from blood cultures and their antibiotic susceptibilities.
Balci I, Eksi F, Bayram A., J. Int. Med. Res. 30(4), 2002
PMID: 12235925
The Pfam protein families database.
Bateman A, Birney E, Cerruti L, Durbin R, Etwiller L, Eddy SR, Griffiths-Jones S, Howe KL, Marshall M, Sonnhammer EL., Nucleic Acids Res. 30(1), 2002
PMID: 11752314
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003.
Boeckmann B, Bairoch A, Apweiler R, Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, Pilbout S, Schneider M., Nucleic Acids Res. 31(1), 2003
PMID: 12520024
The respiratory chain of Corynebacterium glutamicum.
Bott M, Niebisch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948635
Iron acquisition by Gram-positive bacterial pathogens.
Brown JS, Holden DW., Microbes Infect. 4(11), 2002
PMID: 12361915
RpoN-dependent transcription of rpoH?
Pallen M., Mol. Microbiol. 31(1), 1999
PMID: 9987139
A neuraminidase from Streptococcus pneumoniae has the features of a surface protein.
Camara M, Boulnois GJ, Andrew PW, Mitchell TJ., Infect. Immun. 62(9), 1994
PMID: 8063384
The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.
Cerdeno-Tarraga AM, Efstratiou A, Dover LG, Holden MT, Pallen M, Bentley SD, Besra GS, Churcher C, James KD, De Zoysa A, Chillingworth T, Cronin A, Dowd L, Feltwell T, Hamlin N, Holroyd S, Jagels K, Moule S, Quail MA, Rabbinowitsch E, Rutherford KM, Thomson NR, Unwin L, Whitehead S, Barrell BG, Parkhill J., Nucleic Acids Res. 31(22), 2003
PMID: 14602910
Coryneform bacteria in infectious diseases: clinical and laboratory aspects.
Coyle MB, Lipsky BA., Clin. Microbiol. Rev. 3(3), 1990
PMID: 2116939
The bacA gene of Escherichia coli encodes an undecaprenyl pyrophosphate phosphatase activity.
El Ghachi M, Bouhss A, Blanot D, Mengin-Lecreulx D., J. Biol. Chem. 279(29), 2004
PMID: 15138271
The Arcanobacterium pyogenes collagen-binding protein, CbpA, promotes adhesion to host cells.
Esmay PA, Billington SJ, Link MA, Songer JG, Jost BH., Infect. Immun. 71(8), 2003
PMID: 12874314
Surface protein adhesins of Staphylococcus aureus.
Foster TJ, Hook M., Trends Microbiol. 6(12), 1998
PMID: 10036727
Clinical microbiology of coryneform bacteria.
Funke G, von Graevenitz A, Clarridge JE 3rd, Bernard KA., Clin. Microbiol. Rev. 10(1), 1997
PMID: 8993861
Analyzing genomes with cumulative skew diagrams.
Grigoriev A., Nucleic Acids Res. 26(10), 1998
PMID: 9580676
Pathogenomics of mobile genetic elements of toxigenic bacteria.
Hacker J, Hochhut B, Middendorf B, Schneider G, Buchrieser C, Gottschalk G, Dobrindt U., Int. J. Med. Microbiol. 293(7-8), 2004
PMID: 15149018

AUTHOR UNKNOWN, 1987
Out of the iron age: new insights into the critical role of manganese homeostasis in bacteria.
Jakubovics NS, Jenkinson HF., Microbiology (Reading, Engl.) 147(Pt 7), 2001
PMID: 11429449
Role of fibronectin-binding MSCRAMMs in bacterial adherence and entry into mammalian cells.
Joh D, Wann ER, Kreikemeyer B, Speziale P, Hook M., Matrix Biol. 18(3), 1999
PMID: 10429941
Serious infections caused by diphtheroids.
Johnson WD, Kaye D., Ann. N. Y. Acad. Sci. 174(2), 1970
PMID: 5278136
Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique.
Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Puhler A, Meyer F., J. Biotechnol. 106(2-3), 2003
PMID: 14651855
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
KEGG: kyoto encyclopedia of genes and genomes.
Kanehisa M, Goto S., Nucleic Acids Res. 28(1), 2000
PMID: 10592173

AUTHOR UNKNOWN, 1984
Plasmids in group JK coryneform bacteria isolated in a single hospital.
Kerry-Williams SM, Noble WC., J Hyg (Lond) 97(2), 1986
PMID: 3023480
Group JK coryneform bacteria.
Kerry-Williams SM, Noble WC., J. Hosp. Infect. 9(1), 1987
PMID: 2880898
Prospective study of catalase-positive coryneform organisms in clinical specimens: identification, clinical relevance, and antibiotic susceptibility.
Lagrou K, Verhaegen J, Janssens M, Wauters G, Verbist L., Diagn. Microbiol. Infect. Dis. 30(1), 1998
PMID: 9488824
Cholesterol oxidase: sources, physical properties and analytical applications.
MacLachlan J, Wotherspoon AT, Ansell RO, Brooks CJ., J. Steroid Biochem. Mol. Biol. 72(5), 2000
PMID: 10822008
Insertion sequences.
Mahillon J, Chandler M., Microbiol. Mol. Biol. Rev. 62(3), 1998
PMID: 9729608
Diphtheria remains a threat to health in the developing world--an overview.
Mattos-Guaraldi AL, Moreira LO, Damasco PV, Hirata Junior R., Mem. Inst. Oswaldo Cruz 98(8), 2003
PMID: 15049077
Development of joint application strategies for two microbial gene finders.
McHardy AC, Goesmann A, Puhler A, Meyer F., Bioinformatics 20(10), 2004
PMID: 14988122
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Large, identical, tandem repeating units in the C protein alpha antigen gene, bca, of group B streptococci.
Michel JL, Madoff LC, Olson K, Kling DE, Kasper DL, Ausubel FM., Proc. Natl. Acad. Sci. U.S.A. 89(21), 1992
PMID: 1438195
NorM, a putative multidrug efflux protein, of Vibrio parahaemolyticus and its homolog in Escherichia coli.
Morita Y, Kodama K, Shiota S, Mine T, Kataoka A, Mizushima T, Tsuchiya T., Antimicrob. Agents Chemother. 42(7), 1998
PMID: 9661020
The genome stability in Corynebacterium species due to lack of the recombinational repair system.
Nakamura Y, Nishio Y, Ikeo K, Gojobori T., Gene 317(1-2), 2003
PMID: 14604803
Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome.
Nakata A, Amemura M, Makino K., J. Bacteriol. 171(6), 1989
PMID: 2656660
A specific bacterial aminoacylase cleaves odorant precursors secreted in the human axilla.
Natsch A, Gfeller H, Gygax P, Schmid J, Acuna G., J. Biol. Chem. 278(8), 2002
PMID: 12468539
Surface proteins of gram-positive bacteria and mechanisms of their targeting to the cell wall envelope.
Navarre WW, Schneewind O., Microbiol. Mol. Biol. Rev. 63(1), 1999
PMID: 10066836
Identification and mutagenesis by allelic exchange of choE, encoding a cholesterol oxidase from the intracellular pathogen Rhodococcus equi.
Navas J, Gonzalez-Zorn B, Ladron N, Garrido P, Vazquez-Boland JA., J. Bacteriol. 183(16), 2001
PMID: 11466283
Molecular cloning and characterization of the alkaline ceramidase from Pseudomonas aeruginosa PA01.
Nieuwenhuizen WF, van Leeuwen S, Jack RW, Egmond MR, Gotz F., Protein Expr. Purif. 30(1), 2003
PMID: 12821326
Cloning and sequence analysis of a Streptomyces cholesterol esterase gene.
Nishimura M, Sugiyama M., Appl. Microbiol. Biotechnol. 41(4), 1994
PMID: 7765102
Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.
Nishio Y, Nakamura Y, Kawarabayasi Y, Usuda Y, Kimura E, Sugimoto S, Matsui K, Yamagishi A, Kikuchi H, Ikeo K, Gojobori T., Genome Res. 13(7), 2003
PMID: 12840036
Major facilitator superfamily.
Pao SS, Paulsen IT, Saier MH Jr., Microbiol. Mol. Biol. Rev. 62(1), 1998
PMID: 9529885
Corynebacterium glutamicum: a dissection of the PTS.
Parche S, Burkovski A, Sprenger GA, Weil B, Kramer R, Titgemeyer F., J. Mol. Microbiol. Biotechnol. 3(3), 2001
PMID: 11361073
Corynebacterium diphtheriae: a PTS view to the genome.
Parche S, Thomae AW, Schlicht M, Titgemeyer F., J. Mol. Microbiol. Biotechnol. 3(3), 2001
PMID: 11361072
An investigation of nosocomial infection with Corynebacterium jeikeium in surgical patients using a ribosomal RNA gene probe.
Pitcher D, Johnson A, Allerberger F, Woodford N, George R., Eur. J. Clin. Microbiol. Infect. Dis. 9(9), 1990
PMID: 1699761
A polyketide synthase catalyzes the last condensation step of mycolic acid biosynthesis in mycobacteria and related organisms.
Portevin D, De Sousa-D'Auria C, Houssin C, Grimaldi C, Chami M, Daffe M, Guilhot C., Proc. Natl. Acad. Sci. U.S.A. 101(1), 2003
PMID: 14695899
Characterization and sequencing of a respiratory burst-inhibiting acid phosphatase from Francisella tularensis.
Reilly TJ, Baron GS, Nano FE, Kuhlenschmidt MS., J. Biol. Chem. 271(18), 1996
PMID: 8631917
Bacteriocins: evolution, ecology, and application.
Riley MA, Wertz JE., Annu. Rev. Microbiol. 56(), 2002
PMID: 12142491
Characterization and identification of 95 diphtheroid (group JK) cultures isolated from clinical specimens.
Riley PS, Hollis DG, Utter GB, Weaver RE, Baker CN., J. Clin. Microbiol. 9(3), 1979
PMID: 110826
Conservation of the biotin regulon and the BirA regulatory signal in Eubacteria and Archaea.
Rodionov DA, Mironov AA, Gelfand MS., Genome Res. 12(10), 2002
PMID: 12368242
Microbial type I fatty acid synthases (FAS): major players in a network of cellular FAS systems.
Schweizer E, Hofmann J., Microbiol. Mol. Biol. Rev. 68(3), 2004
PMID: 15353567
Oxidative stress.
Storz G, Imlay JA., Curr. Opin. Microbiol. 2(2), 1999
PMID: 10322176
A probabilistic method for identifying start codons in bacterial genomes.
Suzek BE, Ermolaeva MD, Schreiber M, Salzberg SL., Bioinformatics 17(12), 2001
PMID: 11751220
The COG database: a tool for genome-scale analysis of protein functions and evolution.
Tatusov RL, Galperin MY, Natale DA, Koonin EV., Nucleic Acids Res. 28(1), 2000
PMID: 10592175
Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library.
Tauch A, Homann I, Mormann S, Ruberg S, Billault A, Bathe B, Brand S, Brockmann-Gretza O, Ruckert C, Schischka N, Wrenger C, Hoheisel J, Mockel B, Huthmacher K, Pfefferle W, Puhler A, Kalinowski J., J. Biotechnol. 95(1), 2002
PMID: 11879709
Assembly of pili in Gram-positive bacteria.
Ton-That H, Schneewind O., Trends Microbiol. 12(5), 2004
PMID: 15120142
Corynebacterium CDC group JK (Corynebacterium jeikeium) sepsis in haematological patients: a report of three cases and a systematic literature review.
van der Lelie H, Leverstein-Van Hall M, Mertens M, van Zaanen HC, van Oers RH, Thomas BL, von dem Borne AE, Kuijper EJ., Scand. J. Infect. Dis. 27(6), 1995
PMID: 8685637
Group JK corynebacteria in skin flora of healthy persons and patients.
Wichmann S, Wirsing von Koenig CH, Becker-Boost E, Finger H., Eur. J. Clin. Microbiol. 4(5), 1985
PMID: 4065137
A new subfamily of the Nudix hydrolase superfamily active on 5-methyl-UTP (ribo-TTP) and UTP.
Xu W, Shen J, Dunn CA, Bessman MJ., J. Biol. Chem. 278(39), 2003
PMID: 12871944

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