The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing

Tauch A, Trost E, Tilker A, Ludewig U, Schneiker-Bekel S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Goetker S, et al. (2008)
Journal of Biotechnology 136(1-2): 11-21.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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DOI
Autor*in
Tauch, AndreasUniBi; Trost, EvaUniBi ; Tilker, AlexandraUniBi; Ludewig, Ulrike; Schneiker-Bekel, SusanneUniBi; Goesmann, AlexanderUniBi ; Arnold, WalterUniBi; Bekel, ThomasUniBi; Brinkrolf, KarinaUniBi; Brune, IrisUniBi; Goetker, Susanne; Kalinowski, JörnUniBi
Alle
Einrichtung
Centrum für Biotechnologie > Arbeitsgruppe A. Pühler
Technische Fakultät > Computational Genomics
Centrum für Biotechnologie > Arbeitsgruppe J. Kalinowski
Centrum für Biotechnologie > Institut für Genomforschung und Systembiologie
Centrum für Biotechnologie > Arbeitsgruppe A. Goesmann
Fakultät für Biologie > Genetik und Genomik der Pflanzen
Centrum für Biotechnologie > Arbeitsgruppe A. Tauch
Centrum für Biotechnologie > Arbeitsgruppe B. Weisshaar
Centrum für Biotechnologie > Technologieplattformen > Bioinformatics Resource Facility
Stichworte
virulence; factors; antibiotic resistance; urinary tract infection; Corynebacterium urealyticum; genome sequence; beta-oxidation
Erscheinungsjahr
2008
Zeitschriftentitel
Journal of Biotechnology
Band
136
Ausgabe
1-2
Seite(n)
11-21
Page URI
https://pub.uni-bielefeld.de/record/1585918

Zitieren

Tauch A, Trost E, Tilker A, et al. The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing. Journal of Biotechnology. 2008;136(1-2):11-21.
Tauch, A., Trost, E., Tilker, A., Ludewig, U., Schneiker-Bekel, S., Goesmann, A., Arnold, W., et al. (2008). The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing. Journal of Biotechnology, 136(1-2), 11-21. https://doi.org/10.1016/j.jbiotec.2008.02.009
Tauch, Andreas, Trost, Eva, Tilker, Alexandra, Ludewig, Ulrike, Schneiker-Bekel, Susanne, Goesmann, Alexander, Arnold, Walter, et al. 2008. “The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing”. Journal of Biotechnology 136 (1-2): 11-21.
Tauch, A., Trost, E., Tilker, A., Ludewig, U., Schneiker-Bekel, S., Goesmann, A., Arnold, W., Bekel, T., Brinkrolf, K., Brune, I., et al. (2008). The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing. Journal of Biotechnology 136, 11-21.
Tauch, A., et al., 2008. The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing. Journal of Biotechnology, 136(1-2), p 11-21.
A. Tauch, et al., “The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing”, Journal of Biotechnology, vol. 136, 2008, pp. 11-21.
Tauch, A., Trost, E., Tilker, A., Ludewig, U., Schneiker-Bekel, S., Goesmann, A., Arnold, W., Bekel, T., Brinkrolf, K., Brune, I., Goetker, S., Kalinowski, J., Kamp, P.-B., Lobo, F.P., Viehöver, P., Weisshaar, B., Soriano, F., Droege, M., Pühler, A.: The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing. Journal of Biotechnology. 136, 11-21 (2008).
Tauch, Andreas, Trost, Eva, Tilker, Alexandra, Ludewig, Ulrike, Schneiker-Bekel, Susanne, Goesmann, Alexander, Arnold, Walter, Bekel, Thomas, Brinkrolf, Karina, Brune, Iris, Goetker, Susanne, Kalinowski, Jörn, Kamp, Paul-Bertram, Lobo, Francisco Pereira, Viehöver, Prisca, Weisshaar, Bernd, Soriano, Francisco, Droege, Marcus, and Pühler, Alfred. “The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing”. Journal of Biotechnology 136.1-2 (2008): 11-21.

47 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Bloodstream and catheter-related infections due to different clones of multidrug-resistant and biofilm producer Corynebacterium striatum.
Ramos JN, Souza C, Faria YV, da Silva EC, Veras JFC, Baio PVP, Seabra SH, de Oliveira Moreira L, Hirata Júnior R, Mattos-Guaraldi AL, Vieira VV., BMC Infect Dis 19(1), 2019
PMID: 31357945
Extracytoplasmic function sigma factor σD confers resistance to environmental stress by enhancing mycolate synthesis and modifying peptidoglycan structures in Corynebacterium glutamicum.
Toyoda K, Inui M., Mol Microbiol 107(3), 2018
PMID: 29148103
Phylogeny Trumps Chemotaxonomy: A Case Study Involving Turicella otitidis.
Baek I, Kim M, Lee I, Na SI, Goodfellow M, Chun J., Front Microbiol 9(), 2018
PMID: 29760685
Identification and characterization of smallest pore-forming protein in the cell wall of pathogenic Corynebacterium urealyticum DSM 7109.
Abdali N, Younas F, Mafakheri S, Pothula KR, Kleinekathöfer U, Tauch A, Benz R., BMC Biochem 19(1), 2018
PMID: 29743008
Genome sequence of a multidrug-resistant Corynebacterium striatum isolated from bloodstream infection from a nosocomial outbreak in Rio de Janeiro, Brazil.
Ramos JN, Rodrigues IDS, Baio PVP, Veras JFC, Ramos RTJ, Pacheco LG, Azevedo VA, Hirata Júnior R, Marín MA, Mattos-Guaraldi AL, Vieira VV., Mem Inst Oswaldo Cruz 113(9), 2018
PMID: 29995109
Occurrence of Corynebacterium striatum as an emerging antibiotic-resistant nosocomial pathogen in a Tunisian hospital.
Alibi S, Ferjani A, Boukadida J, Cano ME, Fernández-Martínez M, Martínez-Martínez L, Navas J., Sci Rep 7(1), 2017
PMID: 28848236
Phenotypic, molecular characterization, antimicrobial susceptibility and draft genome sequence of Corynebacterium argentoratense strains isolated from clinical samples.
Fernández-Natal I, Sáez-Nieto JA, Rodríguez-Lázaro D, Valdezate-Ramos S, Parras-Padilla T, Medina MJ, Rodríguez-Pollán RH, Blom J, Tauch A, Soriano F., New Microbes New Infect 10(), 2016
PMID: 26933505
Susceptibility to Aminoglycosides and Distribution of aph and aac(3)-XI Genes among Corynebacterium striatum Clinical Isolates.
Navas J, Fernández-Martínez M, Salas C, Cano ME, Martínez-Martínez L., PLoS One 11(12), 2016
PMID: 27936101
Corynebacterium urealyticum: a comprehensive review of an understated organism.
Salem N, Salem L, Saber S, Ismail G, Bluth MH., Infect Drug Resist 8(), 2015
PMID: 26056481
Genome informatics and vaccine targets in Corynebacterium urealyticum using two whole genomes, comparative genomics, and reverse vaccinology.
Guimarães L, Soares S, Trost E, Blom J, Ramos R, Silva A, Barh D, Azevedo V., BMC Genomics 16 Suppl 5(), 2015
PMID: 26041051
AAC(3)-XI, a new aminoglycoside 3-N-acetyltransferase from Corynebacterium striatum.
Galimand M, Fishovitz J, Lambert T, Barbe V, Zajicek J, Mobashery S, Courvalin P., Antimicrob Agents Chemother 59(9), 2015
PMID: 26149994
Complete Genome Sequence of the Type Strain Corynebacterium mustelae DSM 45274, Isolated from Various Tissues of a Male Ferret with Lethal Sepsis.
Rückert C, Eimer J, Winkler A, Tauch A., Genome Announc 3(5), 2015
PMID: 26358597
Immunostimulatory CpG motifs in the genomes of gut bacteria and their role in human health and disease.
Kant R, de Vos WM, Palva A, Satokari R., J Med Microbiol 63(pt 2), 2014
PMID: 24255136
Draft Genome Sequence of Marinomonas sp. Strain D104, a Polycyclic Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the Arctic Ocean.
Dong C, Bai X, Lai Q, Xie Y, Chen X, Shao Z., Genome Announc 2(1), 2014
PMID: 24459272
Draft Genome Sequence of Sphingobium sp. Strain C100, a Polycyclic Aromatic Hydrocarbon-Degrading Bacterium from the Deep-Sea Sediment of the Arctic Ocean.
Dong C, Bai X, Lai Q, Xie Y, Chen X, Shao Z., Genome Announc 2(1), 2014
PMID: 24482512
Cohabitation--relationships of corynebacteria and staphylococci on human skin.
Kwaszewska A, Sobiś-Glinkowska M, Szewczyk EM., Folia Microbiol (Praha) 59(6), 2014
PMID: 24880250
Complete Genome Sequence of Corynebacterium imitans DSM 44264, Isolated from a Five-Month-Old Boy with Suspected Pharyngeal Diphtheria.
Möllmann S, Albersmeier A, Rückert C, Tauch A., Genome Announc 2(6), 2014
PMID: 25414508
Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient.
Tippelt A, Albersmeier A, Brinkrolf K, Rückert C, Fernández-Natal I, Soriano F, Tauch A., Genome Announc 2(6), 2014
PMID: 25414509
The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains.
Soares SC, Silva A, Trost E, Blom J, Ramos R, Carneiro A, Ali A, Santos AR, Pinto AC, Diniz C, Barbosa EG, Dorella FA, Aburjaile F, Rocha FS, Nascimento KK, Guimarães LC, Almeida S, Hassan SS, Bakhtiar SM, Pereira UP, Abreu VA, Schneider MP, Miyoshi A, Tauch A, Azevedo V., PLoS One 8(1), 2013
PMID: 23342011
Cell envelope of corynebacteria: structure and influence on pathogenicity.
Burkovski A., ISRN Microbiol 2013(), 2013
PMID: 23724339
Complete Genome Sequence of Corynebacterium urealyticum Strain DSM 7111, Isolated from a 9-Year-Old Patient with Alkaline-Encrusted Cystitis.
Guimarães LC, Soares SC, Albersmeier A, Blom J, Jaenicke S, Azevedo V, Soriano F, Tauch A, Trost E., Genome Announc 1(3), 2013
PMID: 23704183
Understanding alternative fluxes/effluxes through comparative metabolic pathway analysis of phylum actinobacteria using a simplified approach.
Verma M, Lal D, Saxena A, Anand S, Kaur J, Kaur J, Lal R., Gene 531(2), 2013
PMID: 24055419
Corynebacterium jeikeium jk0268 constitutes for the 40 amino acid long PorACj, which forms a homooligomeric and anion-selective cell wall channel.
Abdali N, Barth E, Norouzy A, Schulz R, Nau WM, Kleinekathöfer U, Tauch A, Benz R., PLoS One 8(10), 2013
PMID: 24116064
Molecular basis of human body odour formation: insights deduced from corynebacterial genome sequences.
Barzantny H, Brune I, Tauch A., Int J Cosmet Sci 34(1), 2012
PMID: 21790661
Corynebacterium prosthetic joint infection.
Cazanave C, Greenwood-Quaintance KE, Hanssen AD, Patel R., J Clin Microbiol 50(5), 2012
PMID: 22337986
Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.
Gao B, Gupta RS., Microbiol Mol Biol Rev 76(1), 2012
PMID: 22390973
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A., BMC Genomics 13(), 2012
PMID: 22443545
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient.
Schröder J, Maus I, Meyer K, Wördemann S, Blom J, Jaenicke S, Schneider J, Trost E, Tauch A., BMC Genomics 13(), 2012
PMID: 22524407
Two-component signal transduction in Corynebacterium glutamicum and other corynebacteria: on the way towards stimuli and targets.
Bott M, Brocker M., Appl Microbiol Biotechnol 94(5), 2012
PMID: 22539022
Evaluation of the Andromas matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of aerobically growing Gram-positive bacilli.
Farfour E, Leto J, Barritault M, Barberis C, Meyer J, Dauphin B, Le Guern AS, Leflèche A, Badell E, Guiso N, Leclercq A, Le Monnier A, Lecuit M, Rodriguez-Nava V, Bergeron E, Raymond J, Vimont S, Bille E, Carbonnelle E, Guet-Revillet H, Lécuyer H, Beretti JL, Vay C, Berche P, Ferroni A, Nassif X, Join-Lambert O., J Clin Microbiol 50(8), 2012
PMID: 22692743
The genus corynebacterium and other medically relevant coryneform-like bacteria.
Bernard K., J Clin Microbiol 50(10), 2012
PMID: 22837327
Multiple-genome comparison reveals new loci for Mycobacterium species identification.
Dai J, Chen Y, Dean S, Morris JG, Salfinger M, Johnson JA., J Clin Microbiol 49(1), 2011
PMID: 21048007
Fatty acid biosynthesis in actinomycetes.
Gago G, Diacovich L, Arabolaza A, Tsai SC, Gramajo H., FEMS Microbiol Rev 35(3), 2011
PMID: 21204864
Transposon Tn5393e carrying the aphA1-containing transposon Tn6023 upstream of strAB does not confer resistance to streptomycin.
Cain AK, Hall RM., Microb Drug Resist 17(3), 2011
PMID: 21702681
Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors.
Trost E, Al-Dilaimi A, Papavasiliou P, Schneider J, Viehoever P, Burkovski A, Soares SC, Almeida SS, Dorella FA, Miyoshi A, Azevedo V, Schneider MP, Silva A, Santos CS, Santos LS, Sabbadini P, Dias AA, Hirata R, Mattos-Guaraldi AL, Tauch A., BMC Genomics 12(), 2011
PMID: 21801446
Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation.
Schröder J, Maus I, Trost E, Tauch A., BMC Genomics 12(), 2011
PMID: 22053731
Reconstitution experiments and gene deletions reveal the existence of two-component major cell wall channels in the genus Corynebacterium.
Barth E, Barceló MA, Kläckta C, Benz R., J Bacteriol 192(3), 2010
PMID: 19966008
Phylogenetic comparative assembly.
Husemann P, Stoye J., Algorithms Mol Biol 5(), 2010
PMID: 20047659
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion.
Trost E, Götker S, Schneider J, Schneiker-Bekel S, Szczepanowski R, Tilker A, Viehoever P, Arnold W, Bekel T, Blom J, Gartemann KH, Linke B, Goesmann A, Pühler A, Shukla SK, Tauch A., BMC Genomics 11(), 2010
PMID: 20137072
Common patterns - unique features: nitrogen metabolism and regulation in Gram-positive bacteria.
Amon J, Titgemeyer F, Burkovski A., FEMS Microbiol Rev 34(4), 2010
PMID: 20337720
A framework for classification of prokaryotic protein kinases.
Tyagi N, Anamika K, Srinivasan N., PLoS One 5(5), 2010
PMID: 20520783
[Corynebacterium urealyticum: from the bedside to complete genome sequence].
Soriano F., Enferm Infecc Microbiol Clin 27(1), 2009
PMID: 19217996
The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies.
Bekel T, Henckel K, Küster H, Meyer F, Mittard Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, Goesmann A., J Biotechnol 140(1-2), 2009
PMID: 19297685
Identification of a terminal rhamnopyranosyltransferase (RptA) involved in Corynebacterium glutamicum cell wall biosynthesis.
Birch HL, Alderwick LJ, Rittmann D, Krumbach K, Etterich H, Grzegorzewicz A, McNeil MR, Eggeling L, Besra GS., J Bacteriol 191(15), 2009
PMID: 19482925
The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model.
Kohl TA, Tauch A., J Biotechnol 143(4), 2009
PMID: 19665500
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehoever P, Gartemann KH, Arnold W, Blom J, Brinkrolf K, Brune I, Götker S, Weisshaar B, Goesmann A, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18430482
Microbiological and clinical features of Corynebacterium urealyticum: urinary tract stones and genomics as the Rosetta Stone.
Soriano F, Tauch A., Clin Microbiol Infect 14(7), 2008
PMID: 18558935

112 References

Daten bereitgestellt von Europe PubMed Central.

Bacteriuria with a multiply resistant species of Corynebacterium (Corynebacterium group D2): an unnoticed cause of urinary tract infection.
Aguado JM, Ponte C, Soriano F., J. Infect. Dis. 156(1), 1987
PMID: 3598215
Encrusted pyelitis and cystitis by Corynebacterium urealyticum (CDC group D2): a new and threatening complication following renal transplant.
Aguado JM, Morales JM, Salto E, Lumbreras C, Lizasoain M, Diaz-Gonzalez R, Martinez MA, Andres A, Praga M, Noriega AR., Transplantation 56(3), 1993
PMID: 8212158
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ., Nucleic Acids Res. 25(17), 1997
PMID: 9254694
CRITICA: coding region identification tool invoking comparative analysis.
Badger JH, Olsen GJ, Woese CR., Mol. Biol. Evol. 16(4), 1999
PMID: 10331277
CRISPR provides acquired resistance against viruses in prokaryotes.
Barrangou R, Fremaux C, Deveau H, Richards M, Boyaval P, Moineau S, Romero DA, Horvath P., Science 315(5819), 2007
PMID: 17379808
BACCardI--a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison.
Bartels D, Kespohl S, Albaum S, Druke T, Goesmann A, Herold J, Kaiser O, Puhler A, Pfeiffer F, Raddatz G, Stoye J, Meyer F, Schuster SC., Bioinformatics 21(7), 2004
PMID: 15514001
The Pfam protein families database.
Bateman A, Birney E, Cerruti L, Durbin R, Etwiller L, Eddy SR, Griffiths-Jones S, Howe KL, Marshall M, Sonnhammer EL., Nucleic Acids Res. 30(1), 2002
PMID: 11752314
Molecular identification of the urea uptake system and transcriptional analysis of urea transporter- and urease-encoding genes in Corynebacterium glutamicum.
Beckers G, Bendt AK, Kramer R, Burkovski A., J. Bacteriol. 186(22), 2004
PMID: 15516578
Transmembrane movement of exogenous long-chain fatty acids: proteins, enzymes, and vectorial esterification.
Black PN, DiRusso CC., Microbiol. Mol. Biol. Rev. 67(3), 2003
PMID: 12966144
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003.
Boeckmann B, Bairoch A, Apweiler R, Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, Pilbout S, Schneider M., Nucleic Acids Res. 31(1), 2003
PMID: 12520024
The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum.
Brinkrolf K, Brune I, Tauch A., J. Biotechnol. 129(2), 2006
PMID: 17227685
The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences.
Brune I, Brinkrolf K, Kalinowski J, Puhler A, Tauch A., BMC Genomics 6(), 2005
PMID: 15938759
The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.
Cerdeno-Tarraga AM, Efstratiou A, Dover LG, Holden MT, Pallen M, Bentley SD, Besra GS, Churcher C, James KD, De Zoysa A, Chillingworth T, Cronin A, Dowd L, Feltwell T, Hamlin N, Holroyd S, Jagels K, Moule S, Quail MA, Rabbinowitsch E, Rutherford KM, Thomson NR, Unwin L, Whitehead S, Barrell BG, Parkhill J., Nucleic Acids Res. 31(22), 2003
PMID: 14602910
Expression and identification of the strA-strB gene pair from streptomycin-resistant Erwinia amylovora.
Chiou CS, Jones AL., Gene 152(1), 1995
PMID: 7828927
Tetracycline antibiotics: mode of action, applications, molecular biology, and epidemiology of bacterial resistance.
Chopra I, Roberts M., Microbiol. Mol. Biol. Rev. 65(2), 2001
PMID: 11381101

Clinical, 2006
Microbial genomes and "missing" enzymes: redefining biochemical pathways.
Cordwell SJ., Arch. Microbiol. 172(5), 1999
PMID: 10550468
Mass spectrometry as a tool for identifying group D2 corynebacteria by their fatty acid profiles.
Couderc F, De Briel D, Demont N, Gilard V, Prome JC., J. Gen. Microbiol. 137(8), 1991
PMID: 1955869
Coryneform bacteria in infectious diseases: clinical and laboratory aspects.
Coyle MB, Lipsky BA., Clin. Microbiol. Rev. 3(3), 1990
PMID: 2116939
Improved microbial gene identification with GLIMMER.
Delcher AL, Harmon D, Kasif S, White O, Salzberg SL., Nucleic Acids Res. 27(23), 1999
PMID: 10556321
Epidemiology of corynebacterial urinary infections.
Duztas O, Erdem H, Pahsa A, Emekdas G, Avci A., Int. J. Infect. Dis. 10(3), 2006
PMID: 16448837
Evidence for symmetric chromosomal inversions around the replication origin in bacteria.
Eisen JA, Heidelberg JF, White O, Salzberg SL., Genome Biol. 1(6), 2000
PMID: 11178265
Bacteremia caused by multiply resistant corynebacterium urealyticum: six case reports and review.
Fernandez-Natal I, Guerra J, Alcoba M, Cachon F, Soriano F., Eur. J. Clin. Microbiol. Infect. Dis. 20(7), 2001
PMID: 11561814
Taxonomic characterization of nine strains isolated from clinical and environmental specimens, and proposal of Corynebacterium tuberculostearicum sp. nov.
Feurer C, Clermont D, Bimet F, Candrea A, Jackson M, Glaser P, Bizet C, Dauga C., Int. J. Syst. Evol. Microbiol. 54(Pt 4), 2004
PMID: 15280269
Clinical microbiology of coryneform bacteria.
Funke G, von Graevenitz A, Clarridge JE 3rd, Bernard KA., Clin. Microbiol. Rev. 10(1), 1997
PMID: 8993861
Influence of external factors in resistance of Corynebacterium urealyticum to antimicrobial agents.
Garcia-Bravo M, Aguado JM, Morales JM, Noriega AR., Antimicrob. Agents Chemother. 40(2), 1996
PMID: 8834909
In vitro activity of 79 antimicrobial agents against Corynebacterium group D2.
Garcia-Rodriguez JA, Garcia Sanchez JE, Munoz Bellido JL, Nebreda Mayoral T, Garcia Sanchez E, Garcia Garcia I., Antimicrob. Agents Chemother. 35(10), 1991
PMID: 1759839
Assembly of distinct pilus structures on the surface of Corynebacterium diphtheriae.
Gaspar AH, Ton-That H., J. Bacteriol. 188(4), 2006
PMID: 16452436
Encrusted cystitis and pyelitis.
Giannakopoulos S, Alivizatos G, Deliveliotis C, Skolarikos A, Kastriotis J, Sofras F., Eur. Urol. 39(4), 2001
PMID: 11306884
Consed: a graphical tool for sequence finishing.
Gordon D, Abajian C, Green P., Genome Res. 8(3), 1998
PMID: 9521923
Analyzing genomes with cumulative skew diagrams.
Grigoriev A., Nucleic Acids Res. 26(10), 1998
PMID: 9580676
A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes.
Haft DH, Selengut J, Mongodin EF, Nelson KE., PLoS Comput. Biol. 1(6), 2005
PMID: 16292354
Biotin uptake in prokaryotes by solute transporters with an optional ATP-binding cassette-containing module.
Hebbeln P, Rodionov DA, Alfandega A, Eitinger T., Proc. Natl. Acad. Sci. U.S.A. 104(8), 2007
PMID: 17301237
Selection for chromosome architecture in bacteria.
Hendrickson H, Lawrence JG., J. Mol. Evol. 62(5), 2006
PMID: 16612541
Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites.
Hendrickson H, Lawrence JG., Mol. Microbiol. 64(1), 2007
PMID: 17376071
Taxonomic implications of the chemical analysis of the D2 group of corynebacteria.
Herrera-Alcaraz EA, Valero-Guillen PL, Martin-Luengo F, Soriano F., FEMS Microbiol. Lett. 60(3), 1990
PMID: 2083845
beta-oxidation - strategies for the metabolism of a wide variety of acyl-CoA esters.
Hiltunen JK, Qin Y., Biochim. Biophys. Acta 1484(2-3), 2000
PMID: 10760462

Hopwood, 1985
The complete genomic sequence of Nocardia farcinica IFM 10152.
Ishikawa J, Yamashita A, Mikami Y, Hoshino Y, Kurita H, Hotta K, Shiba T, Hattori M., Proc. Natl. Acad. Sci. U.S.A. 101(41), 2004
PMID: 15466710
Classification of corynebacteria associated with endocarditis (group JK) as Corynebacterium jeikeium sp. nov
Jackman, System. Appl. Microbiol. 9(), 1987
Identification of genes that are associated with DNA repeats in prokaryotes.
Jansen R, Embden JD, Gaastra W, Schouls LM., Mol. Microbiol. 43(6), 2002
PMID: 11952905
Tylosin resistance in Arcanobacterium pyogenes is encoded by an erm X determinant.
Jost BH, Field AC, Trinh HT, Songer JG, Billington SJ., Antimicrob. Agents Chemother. 47(11), 2003
PMID: 14576111
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
KEGG: kyoto encyclopedia of genes and genomes.
Kanehisa M, Goto S., Nucleic Acids Res. 28(1), 2000
PMID: 10592173
Plasmid-associated bacteriocin production in a JK-type coryneform bacterium
Kerry-Williams, FEMS Microbiol. Lett. 25(), 1984
Plasmids in group JK coryneform bacteria isolated in a single hospital.
Kerry-Williams SM, Noble WC., J Hyg (Lond) 97(2), 1986
PMID: 3023480
GISMO--gene identification using a support vector machine for ORF classification.
Krause L, McHardy AC, Nattkemper TW, Puhler A, Stoye J, Meyer F., Nucleic Acids Res. 35(2), 2006
PMID: 17175534
Hydrophobicity and biofilm formation of lipophilic skin corynebacteria.
Kwaszewska AK, Brewczynska A, Szewczyk EM., Pol. J. Microbiol. 55(3), 2006
PMID: 17338271
Prospective study of catalase-positive coryneform organisms in clinical specimens: identification, clinical relevance, and antibiotic susceptibility.
Lagrou K, Verhaegen J, Janssens M, Wauters G, Verbist L., Diagn. Microbiol. Infect. Dis. 30(1), 1998
PMID: 9488824
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
Lowe TM, Eddy SR., Nucleic Acids Res. 25(5), 1997
PMID: 9023104
Flip-flop around the origin and terminus of replication in prokaryotic genomes.
Mackiewicz P, Mackiewicz D, Kowalczuk M, Cebrat S., Genome Biol. 2(12), 2001
PMID: 11790247
Where does bacterial replication start? Rules for predicting the oriC region.
Mackiewicz P, Zakrzewska-Czerwinska J, Zawilak A, Dudek MR, Cebrat S., Nucleic Acids Res. 32(13), 2004
PMID: 15258248
Group B streptococci escape host immunity by deletion of tandem repeat elements of the alpha C protein.
Madoff LC, Michel JL, Gong EW, Kling DE, Kasper DL., Proc. Natl. Acad. Sci. U.S.A. 93(9), 1996
PMID: 8633028
Corynebacterium diphtheriae employs specific minor pilins to target human pharyngeal epithelial cells.
Mandlik A, Swierczynski A, Das A, Ton-That H., Mol. Microbiol. 64(1), 2007
PMID: 17376076
In vitro activities of ketolide HMR 3647, macrolides, and clindamycin against Coryneform bacteria.
Martinez-Martinez L, Pascual A, Suarez AI, Perea EJ., Antimicrob. Agents Chemother. 42(12), 1998
PMID: 9835530
Activities of gemifloxacin and five other antimicrobial agents against Listeria monocytogenes and coryneform bacteria isolated from clinical samples.
Martinez-Martinez L, Joyanes P, Suarez AI, Perea EJ., Antimicrob. Agents Chemother. 45(8), 2001
PMID: 11451706
Adherence and hemagglutination of Corynebacterium group D2.
Marty N, Agueda L, Lapchine L, Clave D, Henry-Ferry S, Chabanon G., Eur. J. Clin. Microbiol. Infect. Dis. 10(1), 1991
PMID: 1672639
Analysis of cellular components, biochemical reactions, and habitat of human cutaneous lipophilic diphtheroids.
McGinley KJ, Labows JN, Zechman JM, Nordstrom KM, Webster GF, Leyden JJ., J. Invest. Dermatol. 85(4), 1985
PMID: 3930617
Antibiotic use in plant agriculture.
McManus PS, Stockwell VO, Sundin GW, Jones AL., Annu Rev Phytopathol 40(), 2002
PMID: 12147767
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Molecular biology of microbial ureases.
Mobley HL, Island MD, Hausinger RP., Microbiol. Rev. 59(3), 1995
PMID: 7565414
Role of the methylcitrate cycle in Mycobacterium tuberculosis metabolism, intracellular growth, and virulence.
Munoz-Elias EJ, Upton AM, Cherian J, McKinney JD., Mol. Microbiol. 60(5), 2006
PMID: 16689789
The genome stability in Corynebacterium species due to lack of the recombinational repair system.
Nakamura Y, Nishio Y, Ikeo K, Gojobori T., Gene 317(1-2), 2003
PMID: 14604803
Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome.
Nakata A, Amemura M, Makino K., J. Bacteriol. 171(6), 1989
PMID: 2656660
Urease of Corynebacterium glutamicum: organization of corresponding genes and investigation of activity.
Nolden L, Beckers G, Mockel B, Pfefferle W, Nampoothiri KM, Kramera R, Burkovskia A., FEMS Microbiol. Lett. 189(2), 2000
PMID: 10930756
Pericarditis caused by Corynebacterium urealyticum.
Ojeda-Vargas M, Gonzalez-Fernandez MA, Romero D, Cedres A, Monzon-Moreno C., Clin. Microbiol. Infect. 6(10), 2000
PMID: 11168052
Corynebacterium resistens sp. nov., a new multidrug-resistant coryneform bacterium isolated from human infections.
Otsuka Y, Kawamura Y, Koyama T, Iihara H, Ohkusu K, Ezaki T., J. Clin. Microbiol. 43(8), 2005
PMID: 16081900
Major facilitator superfamily.
Pao SS, Paulsen IT, Saier MH Jr., Microbiol. Mol. Biol. Rev. 62(1), 1998
PMID: 9529885
Phylogenetic analysis of the genus Corynebacterium based on 16S rRNA gene sequences.
Pascual C, Lawson PA, Farrow JA, Gimenez MN, Collins MD., Int. J. Syst. Bacteriol. 45(4), 1995
PMID: 7547291
Classification of coryneform bacteria associated with human urinary tract infection (group D2) as Corynebacterium urealyticum sp. nov.
Pitcher D, Soto A, Soriano F, Valero-Guillen P., Int. J. Syst. Bacteriol. 42(1), 1992
PMID: 1736965
Structure of the urease operon of Corynebacterium glutamicum.
Puskas LG, Inui M, Yukawa H., DNA Seq. 11(5), 2000
PMID: 11328647
Induction of Staphylococcus epidermidis biofilm formation via proteolytic processing of the accumulation-associated protein by staphylococcal and host proteases.
Rohde H, Burdelski C, Bartscht K, Hussain M, Buck F, Horstkotte MA, Knobloch JK, Heilmann C, Herrmann M, Mack D., Mol. Microbiol. 55(6), 2005
PMID: 15752207
Nomenclature for macrolide and macrolide-lincosamide-streptogramin B resistance determinants.
Roberts MC, Sutcliffe J, Courvalin P, Jensen LB, Rood J, Seppala H., Antimicrob. Agents Chemother. 43(12), 1999
PMID: 10582867
The replication-related organization of bacterial genomes.
Rocha EP., Microbiology (Reading, Engl.) 150(Pt 6), 2004
PMID: 15184548
Inducible macrolide resistance in Corynebacterium jeikeium.
Rosato AE, Lee BS, Nash KA., Antimicrob. Agents Chemother. 45(7), 2001
PMID: 11408212
Detection of transposon Tn5432-mediated macrolide-lincosamide-streptogramin B (MLSB) resistance in cutaneous propionibacteria from six European cities.
Ross JI, Eady EA, Carnegie E, Cove JH., J. Antimicrob. Chemother. 49(1), 2002
PMID: 11751782
Organization of the origins of replication of the chromosomes of Mycobacterium smegmatis, Mycobacterium leprae and Mycobacterium tuberculosis and isolation of a functional origin from M. smegmatis.
Salazar L, Fsihi H, de Rossi E, Riccardi G, Rios C, Cole ST, Takiff HE., Mol. Microbiol. 20(2), 1996
PMID: 8733228
Microbial type I fatty acid synthases (FAS): major players in a network of cellular FAS systems.
Schweizer E, Hofmann J., Microbiol. Mol. Biol. Rev. 68(3), 2004
PMID: 15353567
Pili with strong attachments: Gram-positive bacteria do it differently.
Scott JR, Zahner D., Mol. Microbiol. 62(2), 2006
PMID: 16978260
Molecular genetics of aminoglycoside resistance genes and familial relationships of the aminoglycoside-modifying enzymes.
Shaw KJ, Rather PN, Hare RS, Miller GH., Microbiol. Rev. 57(1), 1993
PMID: 8385262
Determination of nucleotide sequence of Corynebacterium plasmid pXZ10145.
Shen T, Jia P, Na S, Men D., Chin. J. Biotechnol. 9(3), 1993
PMID: 8049348
Description of some coryneform bacteria isolated from human clinical specimens as Corynebacterium falsenii sp. nov.
Sjoden B, Funke G, Izquierdo A, Akervall E, Collins MD., Int. J. Syst. Bacteriol. 48 Pt 1(), 1998
PMID: 9542078
Molecular analysis of the anaerobic succinate degradation pathway in Clostridium kluyveri.
Sohling B, Gottschalk G., J. Bacteriol. 178(3), 1996
PMID: 8550525
Corynebacterium group D2 as a cause of alkaline-encrusted cystitis: report of four cases and characterization of the organisms.
Soriano F, Ponte C, Santamaria M, Aguado JM, Wilhelmi I, Vela R, Delatte LC., J. Clin. Microbiol. 21(5), 1985
PMID: 3998111
In vitro and in vivo study of stone formation by Corynebacterium group D2 (Corynebacterium urealyticum).
Soriano F, Ponte C, Santamaria M, Castilla C, Fernandez Roblas R., J. Clin. Microbiol. 23(4), 1986
PMID: 3517059
Skin colonization by Corynebacterium groups D2 and JK in hospitalized patients.
Soriano F, Rodriguez-Tudela JL, Fernandez-Roblas R, Aguado JM, Santamaria M., J. Clin. Microbiol. 26(9), 1988
PMID: 3183031
Urinary tract infection caused by Corynebacterium group D2: report of 82 cases and review.
Soriano F, Aguado JM, Ponte C, Fernandez-Roblas R, Rodriguez-Tudela JL., Rev. Infect. Dis. 12(6), 1990
PMID: 2267482
Treatment of encrusted cystitis caused by Corynebacterium group D2 with norfloxacin, ciprofloxacin, and teicoplanin in an experimental model in rats.
Soriano F, Rodriguez-Tudela JL, Castilla C, Aviles P., Antimicrob. Agents Chemother. 35(12), 1991
PMID: 1839760
Adherence of Corynebacterium urealyticum (CDC group D2) and Corynebacterium jeikeium to intravascular and urinary catheters.
Soriano F, Ponte C, Galiano MJ., Eur. J. Clin. Microbiol. Infect. Dis. 12(6), 1993
PMID: 8359166
Antimicrobial susceptibilities of Corynebacterium species and other non-spore-forming gram-positive bacilli to 18 antimicrobial agents.
Soriano F, Zapardiel J, Nieto E., Antimicrob. Agents Chemother. 39(1), 1995
PMID: 7695308
In vitro susceptibilities of aerobic and facultative non-spore-forming gram-positive bacilli to HMR 3647 (RU 66647) and 14 other antimicrobials.
Soriano F, Fernandez-Roblas R, Calvo R, Garcia-Calvo G., Antimicrob. Agents Chemother. 42(5), 1998
PMID: 9593121
A probabilistic method for identifying start codons in bacterial genomes.
Suzek BE, Ermolaeva MD, Schreiber M, Salzberg SL., Bioinformatics 17(12), 2001
PMID: 11751220
ef1097 and ypkK encode enterococcin V583 and corynicin JK, members of a new family of antimicrobial proteins (bacteriocins) with modular structure from Gram-positive bacteria.
Swe PM, Heng NC, Ting YT, Baird HJ, Carne A, Tauch A, Tagg JR, Jack RW., Microbiology (Reading, Engl.) 153(Pt 10), 2007
PMID: 17906121
The COG database: a tool for genome-scale analysis of protein functions and evolution.
Tatusov RL, Galperin MY, Natale DA, Koonin EV., Nucleic Acids Res. 28(1), 2000
PMID: 10592175
The Corynebacterium xerosis composite transposon Tn5432 consists of two identical insertion sequences, designated IS1249, flanking the erythromycin resistance gene ermCX.
Tauch A, Kassing F, Kalinowski J, Puhler A., Plasmid 34(2), 1995
PMID: 8559800
Corynebacterium striatum chloramphenicol resistance transposon Tn5564: genetic organization and transposition in Corynebacterium glutamicum.
Tauch A, Zheng Z, Puhler A, Kalinowski J., Plasmid 40(2), 1998
PMID: 9735314
The tetAB genes of the Corynebacterium striatum R-plasmid pTP10 encode an ABC transporter and confer tetracycline, oxytetracycline and oxacillin resistance in Corynebacterium glutamicum.
Tauch A, Krieft S, Puhler A, Kalinowski J., FEMS Microbiol. Lett. 173(1), 1999
PMID: 10220896
The 51,409-bp R-plasmid pTP10 from the multiresistant clinical isolate Corynebacterium striatum M82B is composed of DNA segments initially identified in soil bacteria and in plant, animal, and human pathogens.
Tauch A, Krieft S, Kalinowski J, Puhler A., Mol. Gen. Genet. 263(1), 2000
PMID: 10732668
Insights into the genetic organization of the Corynebacterium diphtheriae erythromycin resistance plasmid pNG2 deduced from its complete nucleotide sequence.
Tauch A, Bischoff N, Brune I, Kalinowski J., Plasmid 49(1), 2003
PMID: 12584002
Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium.
Tauch A, Bischoff N, Puhler A, Kalinowski J., Plasmid 52(2), 2004
PMID: 15336488
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, Meyer F, Rupp O, Schneiker S, Viehoever P, Puhler A., J. Bacteriol. 187(13), 2005
PMID: 15968079
Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System
Tauch, Biochemica 4(), 2006
Assembly of pili in Gram-positive bacteria.
Ton-That H, Schneewind O., Trends Microbiol. 12(5), 2004
PMID: 15120142
Protein sorting to the cell wall envelope of Gram-positive bacteria.
Ton-That H, Marraffini LA, Schneewind O., Biochim. Biophys. Acta 1694(1-3), 2004
PMID: 15546671
Bap-dependent biofilm formation by pathogenic species of Staphylococcus: evidence of horizontal gene transfer?
Tormo MA, Knecht E, Gotz F, Lasa I, Penades JR., Microbiology (Reading, Engl.) 151(Pt 7), 2005
PMID: 16000737
Alkaline encrusted pyelitis
van, Acta Clin. Belg. 60(), 2005
Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.
Ventura M, Canchaya C, Tauch A, Chandra G, Fitzgerald GF, Chater KF, van Sinderen D., Microbiol. Mol. Biol. Rev. 71(3), 2007
PMID: 17804669
Nitrogen metabolism and nitrogen control in corynebacteria: variations of a common theme.
Walter B, Hanssler E, Kalinowski J, Burkovski A., J. Mol. Microbiol. Biotechnol. 12(1-2), 2007
PMID: 17183220
Bacterial virulence: can we draw the line?
Wassenaar TM, Gaastra W., FEMS Microbiol. Lett. 201(1), 2001
PMID: 11445159
Phospholipid composition of several clinically relevant Corynebacterium species as determined by mass spectrometry: an unusual fatty acyl moiety is present in inositol-containing phospholipids of Corynebacterium urealyticum.
Yague G, Segovia M, Valero-Guillen PL., Microbiology (Reading, Engl.) 149(Pt 7), 2003
PMID: 12855719
Corynebacterium ureicelerivorans sp. nov., a lipophilic bacterium isolated from blood culture.
Yassin AF., Int. J. Syst. Evol. Microbiol. 57(Pt 6), 2007
PMID: 17551029
Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R.
Yukawa H, Omumasaba CA, Nonaka H, Kos P, Okai N, Suzuki N, Suda M, Tsuge Y, Watanabe J, Ikeda Y, Vertes AA, Inui M., Microbiology (Reading, Engl.) 153(Pt 4), 2007
PMID: 17379713
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