What can bacterial genome research teach us about bacteria-plant interactions?

Pühler A, Arlat M, Becker A, Gottfert M, Morrissey JP, O'Gara F (2004)
Current Opinion in Plant Biology 7(2): 137-147.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Pühler, AlfredUniBi ; Arlat, M; Becker, A; Gottfert, M; Morrissey, JP; O'Gara, F
Abstract / Bemerkung
Biological research is changing dramatically. Genomic and post-genomic research is responsible for the accumulation of enormous datasets, which allow the formation of holistic views of the organisms under investigation. In the field of microbiology, bacteria represent ideal candidates for this new development. It is relatively easy to sequence the genomes of bacteria, to analyse their transcriptomes and to collect information at the proteomic level. Genome research on symbiotic, pathogenic and associative bacteria is providing important information on bacteria-plant interactions, especially on type-III secretion systems (TTSS) and their role in the interaction of bacteria with plants.
Erscheinungsjahr
2004
Zeitschriftentitel
Current Opinion in Plant Biology
Band
7
Ausgabe
2
Seite(n)
137-147
ISSN
1369-5266
Page URI
https://pub.uni-bielefeld.de/record/1608254

Zitieren

Pühler A, Arlat M, Becker A, Gottfert M, Morrissey JP, O'Gara F. What can bacterial genome research teach us about bacteria-plant interactions? Current Opinion in Plant Biology. 2004;7(2):137-147.
Pühler, A., Arlat, M., Becker, A., Gottfert, M., Morrissey, J. P., & O'Gara, F. (2004). What can bacterial genome research teach us about bacteria-plant interactions? Current Opinion in Plant Biology, 7(2), 137-147. https://doi.org/10.1016/j.pbi.2004.01.009
Pühler, Alfred, Arlat, M, Becker, A, Gottfert, M, Morrissey, JP, and O'Gara, F. 2004. “What can bacterial genome research teach us about bacteria-plant interactions?”. Current Opinion in Plant Biology 7 (2): 137-147.
Pühler, A., Arlat, M., Becker, A., Gottfert, M., Morrissey, J. P., and O'Gara, F. (2004). What can bacterial genome research teach us about bacteria-plant interactions? Current Opinion in Plant Biology 7, 137-147.
Pühler, A., et al., 2004. What can bacterial genome research teach us about bacteria-plant interactions? Current Opinion in Plant Biology, 7(2), p 137-147.
A. Pühler, et al., “What can bacterial genome research teach us about bacteria-plant interactions?”, Current Opinion in Plant Biology, vol. 7, 2004, pp. 137-147.
Pühler, A., Arlat, M., Becker, A., Gottfert, M., Morrissey, J.P., O'Gara, F.: What can bacterial genome research teach us about bacteria-plant interactions? Current Opinion in Plant Biology. 7, 137-147 (2004).
Pühler, Alfred, Arlat, M, Becker, A, Gottfert, M, Morrissey, JP, and O'Gara, F. “What can bacterial genome research teach us about bacteria-plant interactions?”. Current Opinion in Plant Biology 7.2 (2004): 137-147.

29 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Elucidation of salt stress defense and tolerance mechanisms of crop plants using proteomics--current achievements and perspectives.
Barkla BJ, Castellanos-Cervantes T, de León JL, Matros A, Mock HP, Perez-Alfocea F, Salekdeh GH, Witzel K, Zörb C., Proteomics 13(12-13), 2013
PMID: 23723162
Inside the root microbiome: Bacterial root endophytes and plant growth promotion
Gaiero JR, McCall CA, Thompson KA, Day NJ, Best AS, Dunfield KE., Am J Bot 100(9), 2013
PMID: IND601149167
Engineering rhizobial bioinoculants: a strategy to improve iron nutrition.
Geetha SJ, Joshi SJ., ScientificWorldJournal 2013(), 2013
PMID: 24319357
A semi-fertile interspecific hybrid of Brassica rapa and B. nigra and the cytogenetic analysis of its progeny
Sheng X, Wen G, Guo Y, Yan H, Zhao H, Liu F., Genet Resour Crop Evol 59(1), 2012
PMID: IND44794162
Genomic comparison of the endophyte Herbaspirillum seropedicae SmR1 and the phytopathogen Herbaspirillum rubrisubalbicans M1 by suppressive subtractive hybridization and partial genome sequencing.
Monteiro RA, Balsanelli E, Tuleski T, Faoro H, Cruz LM, Wassem R, de Baura VA, Tadra-Sfeir MZ, Weiss V, DaRocha WD, Muller-Santos M, Chubatsu LS, Huergo LF, Pedrosa FO, de Souza EM., FEMS Microbiol Ecol 80(2), 2012
PMID: 22268687
Strategies for bacterial tagging and gene expression in plant-host colonization studies
Ramos HJO, Yates MG, Pedrosa FO, Souza EM., Soil Biol Biochem 43(8), 2011
PMID: IND44599181
Identification and regulation of the N-acetylglucosamine utilization pathway of the plant pathogenic bacterium Xanthomonas campestris pv. campestris.
Boulanger A, Déjean G, Lautier M, Glories M, Zischek C, Arlat M, Lauber E., J Bacteriol 192(6), 2010
PMID: 20081036
PopW of Ralstonia solanacearum, a new two-domain harpin targeting the plant cell wall.
Li JG, Liu HX, Cao J, Chen LF, Gu C, Allen C, Guo JH., Mol Plant Pathol 11(3), 2010
PMID: 20447285
Evolutionary history of the phl gene cluster in the plant-associated bacterium Pseudomonas fluorescens.
Moynihan JA, Morrissey JP, Coppoolse ER, Stiekema WJ, O'Gara F, Boyd EF., Appl Environ Microbiol 75(7), 2009
PMID: 19181839
The Type III secretion system of Xanthomonas fuscans subsp. fuscans is involved in the phyllosphere colonization process and in transmission to seeds of susceptible beans.
Darsonval A, Darrasse A, Meyer D, Demarty M, Durand K, Bureau C, Manceau C, Jacques MA., Appl Environ Microbiol 74(9), 2008
PMID: 18326683
Plant-pathogen interactions: what is proteomics telling us?
Mehta A, Brasileiro AC, Souza DS, Romano E, Campos MA, Grossi-de-Sá MF, Silva MS, Franco OL, Fragoso RR, Bevitori R, Rocha TL., FEBS J 275(15), 2008
PMID: 18616468
Plant carbohydrate scavenging through tonB-dependent receptors: a feature shared by phytopathogenic and aquatic bacteria.
Blanvillain S, Meyer D, Boulanger A, Lautier M, Guynet C, Denancé N, Vasse J, Lauber E, Arlat M., PLoS One 2(2), 2007
PMID: 17311090
NO way to live; the various roles of nitric oxide in plant-pathogen interactions.
Mur LA, Carver TL, Prats E., J Exp Bot 57(3), 2006
PMID: 16377733
Exploiting new systems-based strategies to elucidate plant-bacterial interactions in the rhizosphere.
Kiely PD, Haynes JM, Higgins CH, Franks A, Mark GL, Morrissey JP, O'Gara F., Microb Ecol 51(3), 2006
PMID: 16596439
Molecular-based strategies to exploit Pseudomonas biocontrol strains for environmental biotechnology applications.
Mark G, Morrissey JP, Higgins P, O'gara F., FEMS Microbiol Ecol 56(2), 2006
PMID: 16629747
PopF1 and PopF2, two proteins secreted by the type III protein secretion system of Ralstonia solanacearum, are translocators belonging to the HrpF/NopX family.
Meyer D, Cunnac S, Guéneron M, Declercq C, Van Gijsegem F, Lauber E, Boucher C, Arlat M., J Bacteriol 188(13), 2006
PMID: 16788199
The rolC gene induces expression of a pathogenesis-related beta-1,3-glucanase in transformed ginseng cells.
Kiselev KV, Kusaykin MI, Dubrovina AS, Bezverbny DA, Zvyagintseva TN, Bulgakov VP., Phytochemistry 67(20), 2006
PMID: 16950484
Perception and modification of plant flavonoid signals by rhizosphere microorganisms.
Shaw LJ, Morris P, Hooker JE., Environ Microbiol 8(11), 2006
PMID: 17014487
Applications of autofluorescent proteins for in situ studies in microbial ecology.
Larrainzar E, O'Gara F, Morrissey JP., Annu Rev Microbiol 59(), 2005
PMID: 16153170
Culture free DGGE and cloning based monitoring of changes in bacterial communities of salad due to processing.
Handschur M, Pinar G, Gallist B, Lubitz W, Haslberger AG., Food Chem Toxicol 43(11), 2005
PMID: 15993997
Establishment of DsRed.T3_S4T as an improved autofluorescent marker for microbial ecology applications.
Dandie CE, Larrainzar E, Mark GL, O'gara F, Morrissey JP., Environ Microbiol 7(11), 2005
PMID: 16232296

76 References

Daten bereitgestellt von Europe PubMed Central.

Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.
Kaneko T, Nakamura Y, Sato S, Asamizu E, Kato T, Sasamoto S, Watanabe A, Idesawa K, Ishikawa A, Kawashima K, Kimura T, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Mochizuki Y, Nakayama S, Nakazaki N, Shimpo S, Sugimoto M, Takeuchi C, Yamada M, Tabata S., DNA Res. 7(6), 2000
PMID: 11214968
The composite genome of the legume symbiont Sinorhizobium meliloti.
Galibert F, Finan TM, Long SR, Puhler A, Abola P, Ampe F, Barloy-Hubler F, Barnett MJ, Becker A, Boistard P, Bothe G, Boutry M, Bowser L, Buhrmester J, Cadieu E, Capela D, Chain P, Cowie A, Davis RW, Dreano S, Federspiel NA, Fisher RF, Gloux S, Godrie T, Goffeau A, Golding B, Gouzy J, Gurjal M, Hernandez-Lucas I, Hong A, Huizar L, Hyman RW, Jones T, Kahn D, Kahn ML, Kalman S, Keating DH, Kiss E, Komp C, Lelaure V, Masuy D, Palm C, Peck MC, Pohl TM, Portetelle D, Purnelle B, Ramsperger U, Surzycki R, Thebault P, Vandenbol M, Vorholter FJ, Weidner S, Wells DH, Wong K, Yeh KC, Batut J., Science 293(5530), 2001
PMID: 11474104
The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis.
Simpson AJ, Reinach FC, Arruda P, Abreu FA, Acencio M, Alvarenga R, Alves LM, Araya JE, Baia GS, Baptista CS, Barros MH, Bonaccorsi ED, Bordin S, Bove JM, Briones MR, Bueno MR, Camargo AA, Camargo LE, Carraro DM, Carrer H, Colauto NB, Colombo C, Costa FF, Costa MC, Costa-Neto CM, Coutinho LL, Cristofani M, Dias-Neto E, Docena C, El-Dorry H, Facincani AP, Ferreira AJ, Ferreira VC, Ferro JA, Fraga JS, Franca SC, Franco MC, Frohme M, Furlan LR, Garnier M, Goldman GH, Goldman MH, Gomes SL, Gruber A, Ho PL, Hoheisel JD, Junqueira ML, Kemper EL, Kitajima JP, Krieger JE, Kuramae EE, Laigret F, Lambais MR, Leite LC, Lemos EG, Lemos MV, Lopes SA, Lopes CR, Machado JA, Machado MA, Madeira AM, Madeira HM, Marino CL, Marques MV, Martins EA, Martins EM, Matsukuma AY, Menck CF, Miracca EC, Miyaki CY, Monteriro-Vitorello CB, Moon DH, Nagai MA, Nascimento AL, Netto LE, Nhani A Jr, Nobrega FG, Nunes LR, Oliveira MA, de Oliveira MC, de Oliveira RC, Palmieri DA, Paris A, Peixoto BR, Pereira GA, Pereira HA Jr, Pesquero JB, Quaggio RB, Roberto PG, Rodrigues V, de M Rosa AJ, de Rosa VE Jr, de Sa RG, Santelli RV, Sawasaki HE, da Silva AC, da Silva AM, da Silva FR, da Silva WA Jr, da Silveira JF, Silvestri ML, Siqueira WJ, de Souza AA, de Souza AP, Terenzi MF, Truffi D, Tsai SM, Tsuhako MH, Vallada H, Van Sluys MA, Verjovski-Almeida S, Vettore AL, Zago MA, Zatz M, Meidanis J, Setubal JC., Nature 406(6792), 2000
PMID: 10910347
Comparative genomic analysis of plant-associated bacteria.
Van Sluys MA, Monteiro-Vitorello CB, Camargo LE, Menck CF, Da Silva AC, Ferro JA, Oliveira MC, Setubal JC, Kitajima JP, Simpson AJ., Annu Rev Phytopathol 40(), 2002
PMID: 12147758
Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.
Goodner B, Hinkle G, Gattung S, Miller N, Blanchard M, Qurollo B, Goldman BS, Cao Y, Askenazi M, Halling C, Mullin L, Houmiel K, Gordon J, Vaudin M, Iartchouk O, Epp A, Liu F, Wollam C, Allinger M, Doughty D, Scott C, Lappas C, Markelz B, Flanagan C, Crowell C, Gurson J, Lomo C, Sear C, Strub G, Cielo C, Slater S., Science 294(5550), 2001
PMID: 11743194
The genome of the natural genetic engineer Agrobacterium tumefaciens C58.
Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF Jr, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D Sr, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW., Science 294(5550), 2001
PMID: 11743193
Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.
da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El-Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA, Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos Santos M, Truffi D, Tsai SM, White FF, Setubal JC, Kitajima JP., Nature 417(6887), 2002
PMID: 12024217
Genome sequence of the plant pathogen Ralstonia solanacearum.
Salanoubat M, Genin S, Artiguenave F, Gouzy J, Mangenot S, Arlat M, Billault A, Brottier P, Camus JC, Cattolico L, Chandler M, Choisne N, Claudel-Renard C, Cunnac S, Demange N, Gaspin C, Lavie M, Moisan A, Robert C, Saurin W, Schiex T, Siguier P, Thebault P, Whalen M, Wincker P, Levy M, Weissenbach J, Boucher CA., Nature 415(6871), 2002
PMID: 11823852
Genomics insights into symbiotic nitrogen fixation.
Weidner S, Puhler A, Kuster H., Curr. Opin. Biotechnol. 14(2), 2003
PMID: 12732321
Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.
Kaneko T, Nakamura Y, Sato S, Minamisawa K, Uchiumi T, Sasamoto S, Watanabe A, Idesawa K, Iriguchi M, Kawashima K, Kohara M, Matsumoto M, Shimpo S, Tsuruoka H, Wada T, Yamada M, Tabata S., DNA Res. 9(6), 2002
PMID: 12597275
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.
Buell CR, Joardar V, Lindeberg M, Selengut J, Paulsen IT, Gwinn ML, Dodson RJ, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Daugherty S, Brinkac L, Beanan MJ, Haft DH, Nelson WC, Davidsen T, Zafar N, Zhou L, Liu J, Yuan Q, Khouri H, Fedorova N, Tran B, Russell D, Berry K, Utterback T, Van Aken SE, Feldblyum TV, D'Ascenzo M, Deng WL, Ramos AR, Alfano JR, Cartinhour S, Chatterjee AK, Delaney TP, Lazarowitz SG, Martin GB, Schneider DJ, Tang X, Bender CL, White O, Fraser CM, Collmer A., Proc. Natl. Acad. Sci. U.S.A. 100(18), 2003
PMID: 12928499
Natural genomic design in Sinorhizobium meliloti: novel genomic architectures.
Guo X, Flores M, Mavingui P, Fuentes SI, Hernandez G, Davila G, Palacios R., Genome Res. 13(8), 2003
PMID: 12902376
Production of acyl-homoserine lactone quorum-sensing signals by gram-negative plant-associated bacteria.
Cha C, Gao P, Chen YC, Shaw PD, Farrand SK., Mol. Plant Microbe Interact. 11(11), 1998
PMID: 9805399
Quorum sensing in plant-associated bacteria.
Loh J, Pierson EA, Pierson LS 3rd, Stacey G, Chatterjee A., Curr. Opin. Plant Biol. 5(4), 2002
PMID: 12179960
Quorum-sensing in Rhizobium.
Wisniewski-Dye F, Downie JA., Antonie Van Leeuwenhoek 81(1-4), 2002
PMID: 12448738
Bradyoxetin, a unique chemical signal involved in symbiotic gene regulation.
Loh J, Carlson RW, York WS, Stacey G., Proc. Natl. Acad. Sci. U.S.A. 99(22), 2002
PMID: 12393811
Potential symbiosis-specific genes uncovered by sequencing a 410-kilobase DNA region of the Bradyrhizobium japonicum chromosome.
Gottfert M, Rothlisberger S, Kundig C, Beck C, Marty R, Hennecke H., J. Bacteriol. 183(4), 2001
PMID: 11157954
Mutational and transcriptional analysis of the type III secretion system of Bradyrhizobium japonicum.
Krause A, Doerfel A, Gottfert M., Mol. Plant Microbe Interact. 15(12), 2002
PMID: 12481995
Type III protein secretion systems in bacterial pathogens of animals and plants.
Hueck CJ., Microbiol. Mol. Biol. Rev. 62(2), 1998
PMID: 9618447
Assembly and function of type III secretory systems.
Cornelis GR, Van Gijsegem F., Annu. Rev. Microbiol. 54(), 2000
PMID: 11018143
Common infection strategies of plant and animal pathogenic bacteria.
Buttner D, Bonas U., Curr. Opin. Plant Biol. 6(4), 2003
PMID: 12873524
Rhizobium type III secretion systems: legume charmers or alarmers?
Marie C, Broughton WJ, Deakin WJ., Curr. Opin. Plant Biol. 4(4), 2001
PMID: 11418344
Elaboration of flavonoid-induced proteins by the nitrogen-fixing soybean symbiont Rhizobium fredii is regulated by both nodD1 and nodD2, and is dependent on the cultivar-specificity locus, nolXWBTUV
Krishnan, Microbiology 141(), 1995
Symbiotic implications of type III protein secretion machinery in Rhizobium.
Viprey V, Del Greco A, Golinowski W, Broughton WJ, Perret X., Mol. Microbiol. 28(6), 1998
PMID: 9680225
Characterization of Nops, nodulation outer proteins, secreted via the type III secretion system of NGR234.
Marie C, Deakin WJ, Viprey V, Kopcinska J, Golinowski W, Krishnan HB, Perret X, Broughton WJ., Mol. Plant Microbe Interact. 16(9), 2003
PMID: 12971597
Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A.
Sullivan JT, Trzebiatowski JR, Cruickshank RW, Gouzy J, Brown SD, Elliot RM, Fleetwood DJ, McCallum NG, Rossbach U, Stuart GS, Weaver JE, Webby RJ, De Bruijn FJ, Ronson CW., J. Bacteriol. 184(11), 2002
PMID: 12003951
The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments.
Gonzalez V, Bustos P, Ramirez-Romero MA, Medrano-Soto A, Salgado H, Hernandez-Gonzalez I, Hernandez-Celis JC, Quintero V, Moreno-Hagelsieb G, Girard L, Rodriguez O, Flores M, Cevallos MA, Collado-Vides J, Romero D, Davila G., Genome Biol. 4(6), 2003
PMID: 12801410
Identification of Sinorhizobium meliloti genes regulated during symbiosis.
Cabanes D, Boistard P, Batut J., J. Bacteriol. 182(13), 2000
PMID: 10850975
Isolation of carbon- and nitrogen-deprivation-induced loci of Sinorhizobium meliloti 1021 by Tn5-luxAB mutagenesis.
Milcamps A, Ragatz DM, Lim P, Berger KA, de Bruijn FJ., Microbiology (Reading, Engl.) 144 ( Pt 11)(), 1998
PMID: 9846756
High-resolution transcriptional analysis of the symbiotic plasmid of Rhizobium sp. NGR234.
Perret X, Freiberg C, Rosenthal A, Broughton WJ, Fellay R., Mol. Microbiol. 32(2), 1999
PMID: 10231496
Transcriptome analysis of Sinorhizobium meliloti during symbiosis.
Ampe F, Kiss E, Sabourdy F, Batut J., Genome Biol. 4(2), 2003
PMID: 12620125
Development of Sinorhizobium meliloti pilot macroarrays for transcriptome analysis.
Berges H, Lauber E, Liebe C, Batut J, Kahn D, de Bruijn FJ, Ampe F., Appl. Environ. Microbiol. 69(2), 2003
PMID: 12571049
Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions.
Becker A, Berges H, Krol E, Bruand C, Ruberg S, Capela D, Lauber E, Meilhoc E, Ampe F, de Bruijn FJ, Fourment J, Francez-Charlot A, Kahn D, Kuster H, Liebe C, Puhler A, Weidner S, Batut J., Mol. Plant Microbe Interact. 17(3), 2004
PMID: 15000396
Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression.
Ruberg S, Tian ZX, Krol E, Linke B, Meyer F, Wang Y, Puhler A, Weidner S, Becker A., J. Biotechnol. 106(2-3), 2003
PMID: 14651866
New Rhizobium leguminosarum flavonoid-induced proteins revealed by proteome analysis of differentially displayed proteins.
Guerreiro N, Redmond JW, Rolfe BG, Djordjevic MA., Mol. Plant Microbe Interact. 10(4), 1997
PMID: 9150598
Proteome analysis demonstrates complex replicon and luteolin interactions in pSyma-cured derivatives of Sinorhizobium meliloti strain 2011.
Chen H, Higgins J, Oresnik IJ, Hynes MF, Natera S, Djordjevic MA, Weinman JJ, Rolfe BG., Electrophoresis 21(17), 2000
PMID: 11271501
AniA regulates reserve polymer accumulation and global protein expression in Rhizobium etli.
Encarnacion S, del Carmen Vargas M, Dunn MF, Davalos A, Mendoza G, Mora Y, Mora J., J. Bacteriol. 184(8), 2002
PMID: 11914361
Proteome analysis of aerobic and fermentative metabolism in Rhizobium etli CE3.
Encarnacion S, Guzman Y, Dunn MF, Hernandez M, del Carmen Vargas M, Mora J., Proteomics 3(6), 2003
PMID: 12833533
Proteome analysis of differentially displayed proteins as a tool for the investigation of symbiosis.
Natera SH, Guerreiro N, Djordjevic MA., Mol. Plant Microbe Interact. 13(9), 2000
PMID: 10975656
A global analysis of protein expression profiles in Sinorhizobium meliloti: discovery of new genes for nodule occupancy and stress adaptation.
Djordjevic MA, Chen HC, Natera S, Van Noorden G, Menzel C, Taylor S, Renard C, Geiger O, Weiller GF; Sinorhizobium DNA Sequencing Consortium., Mol. Plant Microbe Interact. 16(6), 2003
PMID: 12795377
Fastidious xylem-limited bacterial plant pathogens.
Purcell AH, Hopkins DL., Annu Rev Phytopathol 34(), 1996
PMID: 15012538
Xylella genomics and bacterial pathogenicity to plants.
Dow JM, Daniels MJ., Yeast 17(4), 2000
PMID: 11119303

AUTHOR UNKNOWN, 0
Whole-genome comparative analysis of three phytopathogenic Xylella fastidiosa strains.
Bhattacharyya A, Stilwagen S, Ivanova N, D'Souza M, Bernal A, Lykidis A, Kapatral V, Anderson I, Larsen N, Los T, Reznik G, Selkov E Jr, Walunas TL, Feil H, Feil WS, Purcell A, Lassez JL, Hawkins TL, Haselkorn R, Overbeek R, Predki PF, Kyrpides NC., Proc. Natl. Acad. Sci. U.S.A. 99(19), 2002
PMID: 12205291
Draft sequencing and comparative genomics of Xylella fastidiosa strains reveal novel biological insights.
Bhattacharyya A, Stilwagen S, Reznik G, Feil H, Feil WS, Anderson I, Bernal A, D'Souza M, Ivanova N, Kapatral V, Larsen N, Los T, Lykidis A, Selkov E Jr, Walunas TL, Purcell A, Edwards RA, Hawkins T, Haselkorn R, Overbeek R, Kyrpides NC, Predki PF., Genome Res. 12(10), 2002
PMID: 12368248
Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.
Van Sluys MA, de Oliveira MC, Monteiro-Vitorello CB, Miyaki CY, Furlan LR, Camargo LE, da Silva AC, Moon DH, Takita MA, Lemos EG, Machado MA, Ferro MI, da Silva FR, Goldman MH, Goldman GH, Lemos MV, El-Dorry H, Tsai SM, Carrer H, Carraro DM, de Oliveira RC, Nunes LR, Siqueira WJ, Coutinho LL, Kimura ET, Ferro ES, Harakava R, Kuramae EE, Marino CL, Giglioti E, Abreu IL, Alves LM, do Amaral AM, Baia GS, Blanco SR, Brito MS, Cannavan FS, Celestino AV, da Cunha AF, Fenille RC, Ferro JA, Formighieri EF, Kishi LT, Leoni SG, Oliveira AR, Rosa VE Jr, Sassaki FT, Sena JA, de Souza AA, Truffi D, Tsukumo F, Yanai GM, Zaros LG, Civerolo EL, Simpson AJ, Almeida NF Jr, Setubal JC, Kitajima JP., J. Bacteriol. 185(3), 2003
PMID: 12533478
A novel regulatory system required for pathogenicity of Xanthomonas campestris is mediated by a small diffusible signal molecule.
Barber CE, Tang JL, Feng JX, Pan MQ, Wilson TJ, Slater H, Dow JM, Williams P, Daniels MJ., Mol. Microbiol. 24(3), 1997
PMID: 9179849
Expression of putative pathogenicity-related genes in Xylella fastidiosa grown at low and high cell density conditions in vitro.
Scarpari LM, Lambais MR, Silva DS, Carraro DM, Carrer H., FEMS Microbiol. Lett. 222(1), 2003
PMID: 12757950
Microarray analyses of Xylella fastidiosa provide evidence of coordinated transcription control of laterally transferred elements.
Nunes LR, Rosato YB, Muto NH, Yanai GM, da Silva VS, Leite DB, Goncalves ER, de Souza AA, Coletta-Filho HD, Machado MA, Lopes SA, de Oliveira RC., Genome Res. 13(4), 2003
PMID: 12670998
Analysis of gene expression in two growth states of Xylella fastidiosa and its relationship with pathogenicity.
de Souza AA, Takita MA, Coletta-Filho HD, Caldana C, Goldman GH, Yanai GM, Muto NH, de Oliveira RC, Nunes LR, Machado MA., Mol. Plant Microbe Interact. 16(10), 2003
PMID: 14558688
Proteome analysis of the plant pathogen Xylella fastidiosa reveals major cellular and extracellular proteins and a peculiar codon bias distribution.
Smolka MB, Martins-de-Souza D, Martins D, Winck FV, Santoro CE, Castellari RR, Ferrari F, Brum IJ, Galembeck E, Della Coletta Filho H, Machado MA, Marangoni S, Novello JC., Proteomics 3(2), 2003
PMID: 12601815
Genomic mining type III secretion system effectors in Pseudomonas syringae yields new picks for all TTSS prospectors.
Collmer A, Lindeberg M, Petnicki-Ocwieja T, Schneider DJ, Alfano JR., Trends Microbiol. 10(10), 2002
PMID: 12377556
Physical interaction between RRS1-R, a protein conferring resistance to bacterial wilt, and PopP2, a type III effector targeted to the plant nucleus.
Deslandes L, Olivier J, Peeters N, Feng DX, Khounlotham M, Boucher C, Somssich I, Genin S, Marco Y., Proc. Natl. Acad. Sci. U.S.A. 100(13), 2003
PMID: 12788974
Identification of Pseudomonas syringae pv. tomato genes induced during infection of Arabidopsis thaliana.
Boch J, Joardar V, Gao L, Robertson TL, Lim M, Kunkel BN., Mol. Microbiol. 44(1), 2002
PMID: 11967070
Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor.
Fouts DE, Abramovitch RB, Alfano JR, Baldo AM, Buell CR, Cartinhour S, Chatterjee AK, D'Ascenzo M, Gwinn ML, Lazarowitz SG, Lin NC, Martin GB, Rehm AH, Schneider DJ, van Dijk K, Tang X, Collmer A., Proc. Natl. Acad. Sci. U.S.A. 99(4), 2002
PMID: 11854524
A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae.
Guttman DS, Vinatzer BA, Sarkar SF, Ranall MV, Kettler G, Greenberg JT., Science 295(5560), 2002
PMID: 11872842
Genomewide identification of proteins secreted by the Hrp type III protein secretion system of Pseudomonas syringae pv. tomato DC3000.
Petnicki-Ocwieja T, Schneider DJ, Tam VC, Chancey ST, Shan L, Jamir Y, Schechter LM, Janes MD, Buell CR, Tang X, Collmer A, Alfano JR., Proc. Natl. Acad. Sci. U.S.A. 99(11), 2002
PMID: 12032338
Identification of novel hrp-regulated genes through functional genomic analysis of the Pseudomonas syringae pv. tomato DC3000 genome.
Zwiesler-Vollick J, Plovanich-Jones AE, Nomura K, Bandyopadhyay S, Joardar V, Kunkel BN, He SY., Mol. Microbiol. 45(5), 2002
PMID: 12207690
Molecular basis of plant growth promotion and biocontrol by rhizobacteria.
Bloemberg GV, Lugtenberg BJ., Curr. Opin. Plant Biol. 4(4), 2001
PMID: 11418345
Pseudomonas for biocontrol of phytopathogens: from functional genomics to commercial exploitation.
Walsh UF, Morrissey JP, O'Gara F., Curr. Opin. Biotechnol. 12(3), 2001
PMID: 11404107
Adaptation of Pseudomonas fluorescens to the plant rhizosphere.
Rainey PB., Environ. Microbiol. 1(3), 1999
PMID: 11207743
Type III secretion in plant growth-promoting Pseudomonas fluorescens SBW25.
Preston GM, Bertrand N, Rainey PB., Mol. Microbiol. 41(5), 2001
PMID: 11555282
Flagella-driven chemotaxis towards exudate components is an important trait for tomato root colonization by Pseudomonas fluorescens.
de Weert S, Vermeiren H, Mulders IH, Kuiper I, Hendrickx N, Bloemberg GV, Vanderleyden J, De Mot R, Lugtenberg BJ., Mol. Plant Microbe Interact. 15(11), 2002
PMID: 12423023
Phenotypic selection and phase variation occur during alfalfa root colonization by Pseudomonas fluorescens F113.
Sanchez-Contreras M, Martin M, Villacieros M, O'Gara F, Bonilla I, Rivilla R., J. Bacteriol. 184(6), 2002
PMID: 11872710
Biocontrol traits of Pseudomonas spp. are regulated by phase variation.
van den Broek D, Chin-A-Woeng TF, Eijkemans K, Mulders IH, Bloemberg GV, Lugtenberg BJ., Mol. Plant Microbe Interact. 16(11), 2003
PMID: 14601668
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 15003213
PubMed | Europe PMC

Suchen in

Google Scholar