The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes
Nakunst D, Larisch C, Hueser AT, Tauch A, Pühler A, Kalinowski J (2007)
JOURNAL OF BACTERIOLOGY 189(13): 4696-4707.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Nakunst, Diana;
Larisch, Christof;
Hueser, Andrea T.;
Tauch, AndreasUniBi;
Pühler, AlfredUniBi ;
Kalinowski, JörnUniBi
Einrichtung
Abstract / Bemerkung
The gene for the extracytoplasmic function (ECF) sigma factor SigM was deleted from the chromosome of the gram-positive soil bacterium Corynebacterium glutamicum to elucidate the role of the SigM protein in the regulation of gene expression. Comparative DNA microarray hybridizations of the C. glutamicum wild type and sigM-deficient mutant C. glutamicum DNI revealed 23 genes with enhanced expression in the sigM-proficient strain, encoding functions in the assembly of iron-sulfur clusters (suf operon), thioredoxin reductase (trxB), thioredoxins (trxC, trxB1), chaperones (groES, groEL, clpB), and proteins involved in the heat shock response (hspR, dnaJ, grpE). Deletion of the sigM gene rendered the C. glutamicum cells more sensitive to heat, cold, and the presence of the thiol oxidant diamide. Transcription of the sigM gene increased under different stress conditions, including heat shock, cold shock, and disulfide stress caused by diamide treatment, suggesting a regulatory role for SigM under thiol-oxidative stress conditions. Stress-responsive promoters were determined upstream of the suf operon and of the trxB, trxC, and trxB1 genes. The deduced SigM consensus promoter is characterized by the - 35 hexamer gGGAAT and the - 10 hexamer YGTTGR. Transcription of the sigM gene is apparently controlled by the ECF sigma factor SigH, since a sigH mutant was unable to enhance the expression of sigM and the SigM regulon under thioloxidative stress conditions. A typical SigH-responsive promoter was mapped upstream of the sigM gene. The ECF sigma factor SigM is apparently part of a regulatory cascade, and its transcription is controlled by SigH under conditions of thiol-oxidative stress.
Erscheinungsjahr
2007
Zeitschriftentitel
JOURNAL OF BACTERIOLOGY
Band
189
Ausgabe
13
Seite(n)
4696-4707
ISSN
0021-9193
Page URI
https://pub.uni-bielefeld.de/record/1593371
Zitieren
Nakunst D, Larisch C, Hueser AT, Tauch A, Pühler A, Kalinowski J. The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes. JOURNAL OF BACTERIOLOGY. 2007;189(13):4696-4707.
Nakunst, D., Larisch, C., Hueser, A. T., Tauch, A., Pühler, A., & Kalinowski, J. (2007). The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes. JOURNAL OF BACTERIOLOGY, 189(13), 4696-4707. https://doi.org/10.1128/JB.00382-07
Nakunst, Diana, Larisch, Christof, Hueser, Andrea T., Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. 2007. “The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes”. JOURNAL OF BACTERIOLOGY 189 (13): 4696-4707.
Nakunst, D., Larisch, C., Hueser, A. T., Tauch, A., Pühler, A., and Kalinowski, J. (2007). The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes. JOURNAL OF BACTERIOLOGY 189, 4696-4707.
Nakunst, D., et al., 2007. The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes. JOURNAL OF BACTERIOLOGY, 189(13), p 4696-4707.
D. Nakunst, et al., “The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes”, JOURNAL OF BACTERIOLOGY, vol. 189, 2007, pp. 4696-4707.
Nakunst, D., Larisch, C., Hueser, A.T., Tauch, A., Pühler, A., Kalinowski, J.: The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes. JOURNAL OF BACTERIOLOGY. 189, 4696-4707 (2007).
Nakunst, Diana, Larisch, Christof, Hueser, Andrea T., Tauch, Andreas, Pühler, Alfred, and Kalinowski, Jörn. “The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes”. JOURNAL OF BACTERIOLOGY 189.13 (2007): 4696-4707.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
38 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Extracytoplasmic function sigma factor σD confers resistance to environmental stress by enhancing mycolate synthesis and modifying peptidoglycan structures in Corynebacterium glutamicum.
Toyoda K, Inui M., Mol Microbiol 107(3), 2018
PMID: 29148103
Toyoda K, Inui M., Mol Microbiol 107(3), 2018
PMID: 29148103
Overlap of Promoter Recognition Specificity of Stress Response Sigma Factors SigD and SigH in Corynebacterium glutamicum ATCC 13032.
Dostálová H, Busche T, Holátko J, Rucká L, Štěpánek V, Barvík I, Nešvera J, Kalinowski J, Pátek M., Front Microbiol 9(), 2018
PMID: 30687273
Dostálová H, Busche T, Holátko J, Rucká L, Štěpánek V, Barvík I, Nešvera J, Kalinowski J, Pátek M., Front Microbiol 9(), 2018
PMID: 30687273
Assignment of sigma factors of RNA polymerase to promoters in Corynebacterium glutamicum.
Dostálová H, Holátko J, Busche T, Rucká L, Rapoport A, Halada P, Nešvera J, Kalinowski J, Pátek M., AMB Express 7(1), 2017
PMID: 28651382
Dostálová H, Holátko J, Busche T, Rucká L, Rapoport A, Halada P, Nešvera J, Kalinowski J, Pátek M., AMB Express 7(1), 2017
PMID: 28651382
Regulons of global transcription factors in Corynebacterium glutamicum.
Toyoda K, Inui M., Appl Microbiol Biotechnol 100(1), 2016
PMID: 26496920
Toyoda K, Inui M., Appl Microbiol Biotechnol 100(1), 2016
PMID: 26496920
The extracytoplasmic function σ factor σ(C) regulates expression of a branched quinol oxidation pathway in Corynebacterium glutamicum.
Toyoda K, Inui M., Mol Microbiol 100(3), 2016
PMID: 26789738
Toyoda K, Inui M., Mol Microbiol 100(3), 2016
PMID: 26789738
Use of In Vitro Transcription System for Analysis of Corynebacterium glutamicum Promoters Recognized by Two Sigma Factors.
Šilar R, Holátko J, Rucká L, Rapoport A, Dostálová H, Kadeřábková P, Nešvera J, Pátek M., Curr Microbiol 73(3), 2016
PMID: 27270733
Šilar R, Holátko J, Rucká L, Rapoport A, Dostálová H, Kadeřábková P, Nešvera J, Pátek M., Curr Microbiol 73(3), 2016
PMID: 27270733
Expanding the regulatory network governed by the extracytoplasmic function sigma factor σH in Corynebacterium glutamicum.
Toyoda K, Teramoto H, Yukawa H, Inui M., J Bacteriol 197(3), 2015
PMID: 25404703
Toyoda K, Teramoto H, Yukawa H, Inui M., J Bacteriol 197(3), 2015
PMID: 25404703
Thiol-based redox switches in prokaryotes.
Hillion M, Antelmann H., Biol Chem 396(5), 2015
PMID: 25720121
Hillion M, Antelmann H., Biol Chem 396(5), 2015
PMID: 25720121
Exploring the role of sigma factor gene expression on production by Corynebacterium glutamicum: sigma factor H and FMN as example.
Taniguchi H, Wendisch VF., Front Microbiol 6(), 2015
PMID: 26257719
Taniguchi H, Wendisch VF., Front Microbiol 6(), 2015
PMID: 26257719
Differential transcriptional profile of Corynebacterium pseudotuberculosis in response to abiotic stresses.
Pinto AC, de Sá PH, Ramos RT, Barbosa S, Barbosa HP, Ribeiro AC, Silva WM, Rocha FS, Santana MP, de Paula Castro TL, Miyoshi A, Schneider MP, Silva A, Azevedo V., BMC Genomics 15(), 2014
PMID: 24405787
Pinto AC, de Sá PH, Ramos RT, Barbosa S, Barbosa HP, Ribeiro AC, Silva WM, Rocha FS, Santana MP, de Paula Castro TL, Miyoshi A, Schneider MP, Silva A, Azevedo V., BMC Genomics 15(), 2014
PMID: 24405787
σ(ECF) factors of gram-positive bacteria: a focus on Bacillus subtilis and the CMNR group.
Souza BM, Castro TL, Carvalho RD, Seyffert N, Silva A, Miyoshi A, Azevedo V., Virulence 5(5), 2014
PMID: 24921931
Souza BM, Castro TL, Carvalho RD, Seyffert N, Silva A, Miyoshi A, Azevedo V., Virulence 5(5), 2014
PMID: 24921931
Transcriptional response of Corynebacterium glutamicum ATCC 13032 to hydrogen peroxide stress and characterization of the OxyR regulon.
Milse J, Petri K, Rückert C, Kalinowski J., J Biotechnol 190(), 2014
PMID: 25107507
Milse J, Petri K, Rückert C, Kalinowski J., J Biotechnol 190(), 2014
PMID: 25107507
Adaptive evolution of Corynebacterium glutamicum resistant to oxidative stress and its global gene expression profiling.
Lee JY, Seo J, Kim ES, Lee HS, Kim P., Biotechnol Lett 35(5), 2013
PMID: 23288296
Lee JY, Seo J, Kim ES, Lee HS, Kim P., Biotechnol Lett 35(5), 2013
PMID: 23288296
Transcriptional control of the F0F1-ATP synthase operon of Corynebacterium glutamicum: SigmaH factor binds to its promoter and regulates its expression at different pH values.
Barriuso-Iglesias M, Barreiro C, Sola-Landa A, Martín JF., Microb Biotechnol 6(2), 2013
PMID: 23298179
Barriuso-Iglesias M, Barreiro C, Sola-Landa A, Martín JF., Microb Biotechnol 6(2), 2013
PMID: 23298179
Corynebacterium glutamicum promoters: a practical approach.
Pátek M, Holátko J, Busche T, Kalinowski J, Nešvera J., Microb Biotechnol 6(2), 2013
PMID: 23305350
Pátek M, Holátko J, Busche T, Kalinowski J, Nešvera J., Microb Biotechnol 6(2), 2013
PMID: 23305350
Regulatory interaction of the Corynebacterium glutamicum whc genes in oxidative stress responses.
Lee JY, Kim HJ, Kim ES, Kim P, Kim Y, Lee HS., J Biotechnol 168(2), 2013
PMID: 23608553
Lee JY, Kim HJ, Kim ES, Kim P, Kim Y, Lee HS., J Biotechnol 168(2), 2013
PMID: 23608553
OxyR acts as a transcriptional repressor of hydrogen peroxide-inducible antioxidant genes in Corynebacterium glutamicum R.
Teramoto H, Inui M, Yukawa H., FEBS J 280(14), 2013
PMID: 23621709
Teramoto H, Inui M, Yukawa H., FEBS J 280(14), 2013
PMID: 23621709
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032.
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24138339
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24138339
Protein turnover quantification in a multilabeling approach: from data calculation to evaluation.
Trötschel C, Albaum SP, Wolff D, Schröder S, Goesmann A, Nattkemper TW, Poetsch A., Mol Cell Proteomics 11(8), 2012
PMID: 22493176
Trötschel C, Albaum SP, Wolff D, Schröder S, Goesmann A, Nattkemper TW, Poetsch A., Mol Cell Proteomics 11(8), 2012
PMID: 22493176
Identification of iron-regulated genes of Bifidobacterium breve UCC2003 as a basis for controlled gene expression.
Cronin M, Zomer A, Fitzgerald GF, van Sinderen D., Bioeng Bugs 3(3), 2012
PMID: 22179149
Cronin M, Zomer A, Fitzgerald GF, van Sinderen D., Bioeng Bugs 3(3), 2012
PMID: 22179149
Construction of in vitro transcription system for Corynebacterium glutamicum and its use in the recognition of promoters of different classes.
Holátko J, Silar R, Rabatinová A, Sanderová H, Halada P, Nešvera J, Krásný L, Pátek M., Appl Microbiol Biotechnol 96(2), 2012
PMID: 22885668
Holátko J, Silar R, Rabatinová A, Sanderová H, Halada P, Nešvera J, Krásný L, Pátek M., Appl Microbiol Biotechnol 96(2), 2012
PMID: 22885668
Transcriptional regulation of the operon encoding stress-responsive ECF sigma factor SigH and its anti-sigma factor RshA, and control of its regulatory network in Corynebacterium glutamicum.
Busche T, Silar R, Pičmanová M, Pátek M, Kalinowski J., BMC Genomics 13(), 2012
PMID: 22943411
Busche T, Silar R, Pičmanová M, Pátek M, Kalinowski J., BMC Genomics 13(), 2012
PMID: 22943411
Tools for genetic manipulations in Corynebacterium glutamicum and their applications.
Nešvera J, Pátek M., Appl Microbiol Biotechnol 90(5), 2011
PMID: 21519933
Nešvera J, Pátek M., Appl Microbiol Biotechnol 90(5), 2011
PMID: 21519933
Determinants of redox sensitivity in RsrA, a zinc-containing anti-sigma factor for regulating thiol oxidative stress response.
Jung YG, Cho YB, Kim MS, Yoo JS, Hong SH, Roe JH., Nucleic Acids Res 39(17), 2011
PMID: 21685450
Jung YG, Cho YB, Kim MS, Yoo JS, Hong SH, Roe JH., Nucleic Acids Res 39(17), 2011
PMID: 21685450
A novel redox-sensing transcriptional regulator CyeR controls expression of an Old Yellow Enzyme family protein in Corynebacterium glutamicum.
Ehira S, Teramoto H, Inui M, Yukawa H., Microbiology 156(pt 5), 2010
PMID: 20110293
Ehira S, Teramoto H, Inui M, Yukawa H., Microbiology 156(pt 5), 2010
PMID: 20110293
Factors enhancing L-valine production by the growth-limited L-isoleucine auxotrophic strain Corynebacterium glutamicum DeltailvA DeltapanB ilvNM13 (pECKAilvBNC).
Denina I, Paegle L, Prouza M, Holátko J, Pátek M, Nesvera J, Ruklisha M., J Ind Microbiol Biotechnol 37(7), 2010
PMID: 20364396
Denina I, Paegle L, Prouza M, Holátko J, Pátek M, Nesvera J, Ruklisha M., J Ind Microbiol Biotechnol 37(7), 2010
PMID: 20364396
Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network.
Schröder J, Tauch A., FEMS Microbiol Rev 34(5), 2010
PMID: 20491930
Schröder J, Tauch A., FEMS Microbiol Rev 34(5), 2010
PMID: 20491930
RosR (Cg1324), a hydrogen peroxide-sensitive MarR-type transcriptional regulator of Corynebacterium glutamicum.
Bussmann M, Baumgart M, Bott M., J Biol Chem 285(38), 2010
PMID: 20643656
Bussmann M, Baumgart M, Bott M., J Biol Chem 285(38), 2010
PMID: 20643656
Identification of novel genes regulated by the oxidative stress-responsive transcriptional activator SdrP in Thermus thermophilus HB8.
Agari Y, Kuramitsu S, Shinkai A., FEMS Microbiol Lett 313(2), 2010
PMID: 21054499
Agari Y, Kuramitsu S, Shinkai A., FEMS Microbiol Lett 313(2), 2010
PMID: 21054499
EMMA 2--a MAGE-compliant system for the collaborative analysis and integration of microarray data.
Dondrup M, Albaum SP, Griebel T, Henckel K, Jünemann S, Kahlke T, Kleindt CK, Küster H, Linke B, Mertens D, Mittard-Runte V, Neuweger H, Runte KJ, Tauch A, Tille F, Pühler A, Goesmann A., BMC Bioinformatics 10(), 2009
PMID: 19200358
Dondrup M, Albaum SP, Griebel T, Henckel K, Jünemann S, Kahlke T, Kleindt CK, Küster H, Linke B, Mertens D, Mittard-Runte V, Neuweger H, Runte KJ, Tauch A, Tille F, Pühler A, Goesmann A., BMC Bioinformatics 10(), 2009
PMID: 19200358
Regulation of Corynebacterium glutamicum heat shock response by the extracytoplasmic-function sigma factor SigH and transcriptional regulators HspR and HrcA.
Ehira S, Teramoto H, Inui M, Yukawa H., J Bacteriol 191(9), 2009
PMID: 19270092
Ehira S, Teramoto H, Inui M, Yukawa H., J Bacteriol 191(9), 2009
PMID: 19270092
A game with many players: control of gdh transcription in Corynebacterium glutamicum.
Hänssler E, Müller T, Palumbo K, Patek M, Brocker M, Krämer R, Burkovski A., J Biotechnol 142(2), 2009
PMID: 19394370
Hänssler E, Müller T, Palumbo K, Patek M, Brocker M, Krämer R, Burkovski A., J Biotechnol 142(2), 2009
PMID: 19394370
Regulation of quinone oxidoreductase by the redox-sensing transcriptional regulator QorR in Corynebacterium glutamicum.
Ehira S, Ogino H, Teramoto H, Inui M, Yukawa H., J Biol Chem 284(25), 2009
PMID: 19403527
Ehira S, Ogino H, Teramoto H, Inui M, Yukawa H., J Biol Chem 284(25), 2009
PMID: 19403527
The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family.
Staroń A, Sofia HJ, Dietrich S, Ulrich LE, Liesegang H, Mascher T., Mol Microbiol 74(3), 2009
PMID: 19737356
Staroń A, Sofia HJ, Dietrich S, Ulrich LE, Liesegang H, Mascher T., Mol Microbiol 74(3), 2009
PMID: 19737356
Corynebacterium glutamicum sigmaE is involved in responses to cell surface stresses and its activity is controlled by the anti-sigma factor CseE.
Park SD, Youn JW, Kim YJ, Lee SM, Kim Y, Lee HS., Microbiology 154(pt 3), 2008
PMID: 18310037
Park SD, Youn JW, Kim YJ, Lee SM, Kim Y, Lee HS., Microbiology 154(pt 3), 2008
PMID: 18310037
The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator.
Kohl TA, Baumbach J, Jungwirth B, Pühler A, Tauch A., J Biotechnol 135(4), 2008
PMID: 18573287
Kohl TA, Baumbach J, Jungwirth B, Pühler A, Tauch A., J Biotechnol 135(4), 2008
PMID: 18573287
Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator.
Agari Y, Kashihara A, Yokoyama S, Kuramitsu S, Shinkai A., Mol Microbiol 70(1), 2008
PMID: 18699868
Agari Y, Kashihara A, Yokoyama S, Kuramitsu S, Shinkai A., Mol Microbiol 70(1), 2008
PMID: 18699868
CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks.
Baumbach J., BMC Bioinformatics 8(), 2007
PMID: 17986320
Baumbach J., BMC Bioinformatics 8(), 2007
PMID: 17986320
69 References
Daten bereitgestellt von Europe PubMed Central.
Characterization of the Mycobacterium tuberculosis sigma factor SigM by assessment of virulence and identification of SigM-dependent genes.
Agarwal N, Woolwine SC, Tyagi S, Bishai WR., Infect. Immun. 75(1), 2006
PMID: 17088352
Agarwal N, Woolwine SC, Tyagi S, Bishai WR., Infect. Immun. 75(1), 2006
PMID: 17088352
Bridge over troubled waters: sensing stress by disulfide bond formation.
Aslund F, Beckwith J., Cell 96(6), 1999
PMID: 10102262
Aslund F, Beckwith J., Cell 96(6), 1999
PMID: 10102262
Transcriptional analysis of the groES-groEL1, groEL2, and dnaK genes in Corynebacterium glutamicum: characterization of heat shock-induced promoters.
Barreiro C, Gonzalez-Lavado E, Patek M, Martin JF., J. Bacteriol. 186(14), 2004
PMID: 15231814
Barreiro C, Gonzalez-Lavado E, Patek M, Martin JF., J. Bacteriol. 186(14), 2004
PMID: 15231814
CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.
Baumbach J, Brinkrolf K, Czaja LF, Rahmann S, Tauch A., BMC Genomics 7(), 2006
PMID: 16478536
Baumbach J, Brinkrolf K, Czaja LF, Rahmann S, Tauch A., BMC Genomics 7(), 2006
PMID: 16478536
Crystal structure of biotin synthase, an S-adenosylmethionine-dependent radical enzyme.
Berkovitch F, Nicolet Y, Wan JT, Jarrett JT, Drennan CL., Science 303(5654), 2004
PMID: 14704425
Berkovitch F, Nicolet Y, Wan JT, Jarrett JT, Drennan CL., Science 303(5654), 2004
PMID: 14704425
The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences.
Brune I, Brinkrolf K, Kalinowski J, Puhler A, Tauch A., BMC Genomics 6(), 2005
PMID: 15938759
Brune I, Brinkrolf K, Kalinowski J, Puhler A, Tauch A., BMC Genomics 6(), 2005
PMID: 15938759
The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum.
Brune I, Werner H, Huser AT, Kalinowski J, Puhler A, Tauch A., BMC Genomics 7(), 2006
PMID: 16469103
Brune I, Werner H, Huser AT, Kalinowski J, Puhler A, Tauch A., BMC Genomics 7(), 2006
PMID: 16469103
Reassessment of protein stability, DNA binding, and protection of Mycobacterium smegmatis Dps.
Ceci P, Ilari A, Falvo E, Giangiacomo L, Chiancone E., J. Biol. Chem. 280(41), 2005
PMID: 16030020
Ceci P, Ilari A, Falvo E, Giangiacomo L, Chiancone E., J. Biol. Chem. 280(41), 2005
PMID: 16030020
Identification of a novel peptidoglycan hydrolase CwlM in Mycobacterium tuberculosis.
Deng LL, Humphries DE, Arbeit RD, Carlton LE, Smole SC, Carroll JD., Biochim. Biophys. Acta 1747(1), 2004
PMID: 15680239
Deng LL, Humphries DE, Arbeit RD, Carlton LE, Smole SC, Carroll JD., Biochim. Biophys. Acta 1747(1), 2004
PMID: 15680239
EMMA: a platform for consistent storage and efficient analysis of microarray data.
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Puhler A, Meyer F., J. Biotechnol. 106(2-3), 2003
PMID: 14651856
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Puhler A, Meyer F., J. Biotechnol. 106(2-3), 2003
PMID: 14651856
clpC and clpP1P2 gene expression in Corynebacterium glutamicum is controlled by a regulatory network involving the transcriptional regulators ClgR and HspR as well as the ECF sigma factor sigmaH.
Engels S, Schweitzer JE, Ludwig C, Bott M, Schaffer S., Mol. Microbiol. 52(1), 2004
PMID: 15049827
Engels S, Schweitzer JE, Ludwig C, Bott M, Schaffer S., Mol. Microbiol. 52(1), 2004
PMID: 15049827
Prediction of transcription terminators in bacterial genomes.
Ermolaeva MD, Khalak HG, White O, Smith HO, Salzberg SL., J. Mol. Biol. 301(1), 2000
PMID: 10926490
Ermolaeva MD, Khalak HG, White O, Smith HO, Salzberg SL., J. Mol. Biol. 301(1), 2000
PMID: 10926490
A mycobacterial extracytoplasmic sigma factor involved in survival following heat shock and oxidative stress.
Fernandes ND, Wu QL, Kong D, Puyang X, Garg S, Husson RN., J. Bacteriol. 181(14), 1999
PMID: 10400584
Fernandes ND, Wu QL, Kong D, Puyang X, Garg S, Husson RN., J. Bacteriol. 181(14), 1999
PMID: 10400584
Biosynthesis of iron-sulphur clusters is a complex and highly conserved process.
Frazzon J, Fick JR, Dean DR., Biochem. Soc. Trans. 30(4), 2002
PMID: 12196163
Frazzon J, Fick JR, Dean DR., Biochem. Soc. Trans. 30(4), 2002
PMID: 12196163
Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants.
Grant SG, Jessee J, Bloom FR, Hanahan D., Proc. Natl. Acad. Sci. U.S.A. 87(12), 1990
PMID: 2162051
Grant SG, Jessee J, Bloom FR, Hanahan D., Proc. Natl. Acad. Sci. U.S.A. 87(12), 1990
PMID: 2162051
Role of OxyR as a peroxide-sensing positive regulator in Streptomyces coelicolor A3(2).
Hahn JS, Oh SY, Roe JH., J. Bacteriol. 184(19), 2002
PMID: 12218006
Hahn JS, Oh SY, Roe JH., J. Bacteriol. 184(19), 2002
PMID: 12218006
Structure and function of bacterial sigma factors.
Helmann JD, Chamberlin MJ., Annu. Rev. Biochem. 57(), 1988
PMID: 3052291
Helmann JD, Chamberlin MJ., Annu. Rev. Biochem. 57(), 1988
PMID: 3052291
The extracytoplasmic function (ECF) sigma factors.
Helmann JD., Adv. Microb. Physiol. 46(), 2002
PMID: 12073657
Helmann JD., Adv. Microb. Physiol. 46(), 2002
PMID: 12073657
Industrial production of amino acids by coryneform bacteria.
Hermann T., J. Biotechnol. 104(1-3), 2003
PMID: 12948636
Hermann T., J. Biotechnol. 104(1-3), 2003
PMID: 12948636
PCR-mediated recombination and mutagenesis. SOEing together tailor-made genes.
Horton RM., Mol. Biotechnol. 3(2), 1995
PMID: 7620981
Horton RM., Mol. Biotechnol. 3(2), 1995
PMID: 7620981
Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source.
Huser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Puhler A, Wiegrabe I, Tauch A., J. Biotechnol. 106(2-3), 2003
PMID: 14651867
Huser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Puhler A, Wiegrabe I, Tauch A., J. Biotechnol. 106(2-3), 2003
PMID: 14651867
The Corynebacterium glutamicum genome: features and impacts on biotechnological processes.
Ikeda M, Nakagawa S., Appl. Microbiol. Biotechnol. 62(2-3), 2003
PMID: 12743753
Ikeda M, Nakagawa S., Appl. Microbiol. Biotechnol. 62(2-3), 2003
PMID: 12743753
Iron-sulphur clusters and the problem with oxygen.
Imlay JA., Mol. Microbiol. 59(4), 2006
PMID: 16430685
Imlay JA., Mol. Microbiol. 59(4), 2006
PMID: 16430685
Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of four species of sigma subunit under various growth conditions.
Jishage M, Iwata A, Ueda S, Ishihama A., J. Bacteriol. 178(18), 1996
PMID: 8808934
Jishage M, Iwata A, Ueda S, Ishihama A., J. Bacteriol. 178(18), 1996
PMID: 8808934
Structure, function, and formation of biological iron-sulfur clusters.
Johnson DC, Dean DR, Smith AD, Johnson MK., Annu. Rev. Biochem. 74(), 2005
PMID: 15952888
Johnson DC, Dean DR, Smith AD, Johnson MK., Annu. Rev. Biochem. 74(), 2005
PMID: 15952888
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
RsrA, an anti-sigma factor regulated by redox change.
Kang JG, Paget MS, Seok YJ, Hahn MY, Bae JB, Hahn JS, Kleanthous C, Buttner MJ, Roe JH., EMBO J. 18(15), 1999
PMID: 10428967
Kang JG, Paget MS, Seok YJ, Hahn MY, Bae JB, Hahn JS, Kleanthous C, Buttner MJ, Roe JH., EMBO J. 18(15), 1999
PMID: 10428967
Protoplast transformation of glutamate-producing bacteria with plasmid DNA.
Katsumata R, Ozaki A, Oka T, Furuya A., J. Bacteriol. 159(1), 1984
PMID: 6145700
Katsumata R, Ozaki A, Oka T, Furuya A., J. Bacteriol. 159(1), 1984
PMID: 6145700
Reduced immunopathology and mortality despite tissue persistence in a Mycobacterium tuberculosis mutant lacking alternative sigma factor, SigH.
Kaushal D, Schroeder BG, Tyagi S, Yoshimatsu T, Scott C, Ko C, Carpenter L, Mehrotra J, Manabe YC, Fleischmann RD, Bishai WR., Proc. Natl. Acad. Sci. U.S.A. 99(12), 2002
PMID: 12060776
Kaushal D, Schroeder BG, Tyagi S, Yoshimatsu T, Scott C, Ko C, Carpenter L, Mehrotra J, Manabe YC, Fleischmann RD, Bishai WR., Proc. Natl. Acad. Sci. U.S.A. 99(12), 2002
PMID: 12060776
Functional analysis of sigH expression in Corynebacterium glutamicum.
Kim TH, Kim HJ, Park JS, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 331(4), 2005
PMID: 15883048
Kim TH, Kim HJ, Park JS, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 331(4), 2005
PMID: 15883048
The whcE gene of Corynebacterium glutamicum is important for survival following heat and oxidative stress.
Kim TH, Park JS, Kim HJ, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 337(3), 2005
PMID: 16212936
Kim TH, Park JS, Kim HJ, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 337(3), 2005
PMID: 16212936
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate.
Koch DJ, Ruckert C, Albersmeier A, Huser AT, Tauch A, Puhler A, Kalinowski J., Mol. Microbiol. 58(2), 2005
PMID: 16194234
Koch DJ, Ruckert C, Albersmeier A, Huser AT, Tauch A, Puhler A, Kalinowski J., Mol. Microbiol. 58(2), 2005
PMID: 16194234
The alternative sigma factor SigB of Corynebacterium glutamicum modulates global gene expression during transition from exponential growth to stationary phase.
Larisch C, Nakunst D, Huser AT, Tauch A, Kalinowski J., BMC Genomics 8(), 2007
PMID: 17204139
Larisch C, Nakunst D, Huser AT, Tauch A, Kalinowski J., BMC Genomics 8(), 2007
PMID: 17204139
Induction of the sufA operon encoding Fe-S assembly proteins by superoxide generators and hydrogen peroxide: involvement of OxyR, IHF and an unidentified oxidant-responsive factor.
Lee JH, Yeo WS, Roe JH., Mol. Microbiol. 51(6), 2004
PMID: 15009899
Lee JH, Yeo WS, Roe JH., Mol. Microbiol. 51(6), 2004
PMID: 15009899
Global characterization of disulfide stress in Bacillus subtilis.
Leichert LI, Scharf C, Hecker M., J. Bacteriol. 185(6), 2003
PMID: 12618461
Leichert LI, Scharf C, Hecker M., J. Bacteriol. 185(6), 2003
PMID: 12618461
Biotechnological production of amino acids and derivatives: current status and prospects.
Leuchtenberger W, Huthmacher K, Drauz K., Appl. Microbiol. Biotechnol. 69(1), 2005
PMID: 16195792
Leuchtenberger W, Huthmacher K, Drauz K., Appl. Microbiol. Biotechnol. 69(1), 2005
PMID: 16195792
The sigma 70 family: sequence conservation and evolutionary relationships.
Lonetto M, Gribskov M, Gross CA., J. Bacteriol. 174(12), 1992
PMID: 1597408
Lonetto M, Gribskov M, Gross CA., J. Bacteriol. 174(12), 1992
PMID: 1597408
Analysis of the Streptomyces coelicolor sigE gene reveals the existence of a subfamily of eubacterial RNA polymerase sigma factors involved in the regulation of extracytoplasmic functions.
Lonetto MA, Brown KL, Rudd KE, Buttner MJ., Proc. Natl. Acad. Sci. U.S.A. 91(16), 1994
PMID: 8052622
Lonetto MA, Brown KL, Rudd KE, Buttner MJ., Proc. Natl. Acad. Sci. U.S.A. 91(16), 1994
PMID: 8052622
Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression.
Manganelli R, Voskuil MI, Schoolnik GK, Dubnau E, Gomez M, Smith I., Mol. Microbiol. 45(2), 2002
PMID: 12123450
Manganelli R, Voskuil MI, Schoolnik GK, Dubnau E, Gomez M, Smith I., Mol. Microbiol. 45(2), 2002
PMID: 12123450
Cascade of sigma factors in streptomycetes: identification of a new extracytoplasmic function sigma factor sigmaJ that is under the control of the stress-response sigma factor sigmaH in Streptomyces coelicolor A3(2).
Mazurakova V, Sevcikova B, Rezuchova B, Kormanec J., Arch. Microbiol. 186(6), 2006
PMID: 16909271
Mazurakova V, Sevcikova B, Rezuchova B, Kormanec J., Arch. Microbiol. 186(6), 2006
PMID: 16909271
DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment.
Morgenstern B., Bioinformatics 15(3), 1999
PMID: 10222408
Morgenstern B., Bioinformatics 15(3), 1999
PMID: 10222408
Genome-wide transcription profiling of Corynebacterium glutamicum after heat shock and during growth on acetate and glucose.
Muffler A, Bettermann S, Haushalter M, Horlein A, Neveling U, Schramm M, Sorgenfrei O., J. Biotechnol. 98(2-3), 2002
PMID: 12141991
Muffler A, Bettermann S, Haushalter M, Horlein A, Neveling U, Schramm M, Sorgenfrei O., J. Biotechnol. 98(2-3), 2002
PMID: 12141991
SoxR-dependent response to oxidative stress and virulence of Erwinia chrysanthemi: the key role of SufC, an orphan ABC ATPase.
Nachin L, El Hassouni M, Loiseau L, Expert D, Barras F., Mol. Microbiol. 39(4), 2001
PMID: 11251816
Nachin L, El Hassouni M, Loiseau L, Expert D, Barras F., Mol. Microbiol. 39(4), 2001
PMID: 11251816
SufC: an unorthodox cytoplasmic ABC/ATPase required for [Fe-S] biogenesis under oxidative stress.
Nachin L, Loiseau L, Expert D, Barras F., EMBO J. 22(3), 2003
PMID: 12554644
Nachin L, Loiseau L, Expert D, Barras F., EMBO J. 22(3), 2003
PMID: 12554644
Multiple sigma factor genes in Brevibacterium lactofermentum: characterization of sigA and sigB.
Oguiza JA, Marcos AT, Malumbres M, Martin JF., J. Bacteriol. 178(2), 1996
PMID: 8550480
Oguiza JA, Marcos AT, Malumbres M, Martin JF., J. Bacteriol. 178(2), 1996
PMID: 8550480
AUTHOR UNKNOWN, 1998
Defining the disulphide stress response in Streptomyces coelicolor A3(2): identification of the sigmaR regulon.
Paget MS, Molle V, Cohen G, Aharonowitz Y, Buttner MJ., Mol. Microbiol. 42(4), 2001
PMID: 11737643
Paget MS, Molle V, Cohen G, Aharonowitz Y, Buttner MJ., Mol. Microbiol. 42(4), 2001
PMID: 11737643
Promoters of Corynebacterium glutamicum.
Patek M, Nesvera J, Guyonvarch A, Reyes O, Leblon G., J. Biotechnol. 104(1-3), 2003
PMID: 12948648
Patek M, Nesvera J, Guyonvarch A, Reyes O, Leblon G., J. Biotechnol. 104(1-3), 2003
PMID: 12948648
Mycobacterium tuberculosis SigM positively regulates Esx secreted protein and nonribosomal peptide synthetase genes and down regulates virulence-associated surface lipid synthesis.
Raman S, Puyang X, Cheng TY, Young DC, Moody DB, Husson RN., J. Bacteriol. 188(24), 2006
PMID: 17028284
Raman S, Puyang X, Cheng TY, Young DC, Moody DB, Husson RN., J. Bacteriol. 188(24), 2006
PMID: 17028284
The McbR repressor modulated by the effector substance S-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism of Corynebacterium glutamicum ATCC 13032.
Rey DA, Nentwich SS, Koch DJ, Ruckert C, Puhler A, Tauch A, Kalinowski J., Mol. Microbiol. 56(4), 2005
PMID: 15853877
Rey DA, Nentwich SS, Koch DJ, Ruckert C, Puhler A, Tauch A, Kalinowski J., Mol. Microbiol. 56(4), 2005
PMID: 15853877
The neighbor-joining method: a new method for reconstructing phylogenetic trees.
Saitou N, Nei M., Mol. Biol. Evol. 4(4), 1987
PMID: 3447015
Saitou N, Nei M., Mol. Biol. Evol. 4(4), 1987
PMID: 3447015
AUTHOR UNKNOWN, 1989
Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum.
Schafer A, Tauch A, Jager W, Kalinowski J, Thierbach G, Puhler A., Gene 145(1), 1994
PMID: 8045426
Schafer A, Tauch A, Jager W, Kalinowski J, Thierbach G, Puhler A., Gene 145(1), 1994
PMID: 8045426
RshA, an anti-sigma factor that regulates the activity of the mycobacterial stress response sigma factor SigH.
Song T, Dove SL, Lee KH, Husson RN., Mol. Microbiol. 50(3), 2003
PMID: 14617153
Song T, Dove SL, Lee KH, Husson RN., Mol. Microbiol. 50(3), 2003
PMID: 14617153
Mycobacterium tuberculosis WhiB3 interacts with RpoV to affect host survival but is dispensable for in vivo growth.
Steyn AJ, Collins DM, Hondalus MK, Jacobs WR Jr, Kawakami RP, Bloom BR., Proc. Natl. Acad. Sci. U.S.A. 99(5), 2002
PMID: 11880648
Steyn AJ, Collins DM, Hondalus MK, Jacobs WR Jr, Kawakami RP, Bloom BR., Proc. Natl. Acad. Sci. U.S.A. 99(5), 2002
PMID: 11880648
A third bacterial system for the assembly of iron-sulfur clusters with homologs in archaea and plastids.
Takahashi Y, Tokumoto U., J. Biol. Chem. 277(32), 2002
PMID: 12089140
Takahashi Y, Tokumoto U., J. Biol. Chem. 277(32), 2002
PMID: 12089140
Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli.
Tauch A, Kirchner O, Wehmeier L, Kalinowski J, Puhler A., FEMS Microbiol. Lett. 123(3), 1994
PMID: 7988915
Tauch A, Kirchner O, Wehmeier L, Kalinowski J, Puhler A., FEMS Microbiol. Lett. 123(3), 1994
PMID: 7988915
Efficient electrotransformation of corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1.
Tauch A, Kirchner O, Loffler B, Gotker S, Puhler A, Kalinowski J., Curr. Microbiol. 45(5), 2002
PMID: 12232668
Tauch A, Kirchner O, Loffler B, Gotker S, Puhler A, Kalinowski J., Curr. Microbiol. 45(5), 2002
PMID: 12232668
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG., Nucleic Acids Res. 25(24), 1997
PMID: 9396791
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG., Nucleic Acids Res. 25(24), 1997
PMID: 9396791
Mycothiol-dependent mycobacterial response to oxidative stress.
Ung KS, Av-Gay Y., FEBS Lett. 580(11), 2006
PMID: 16643903
Ung KS, Av-Gay Y., FEBS Lett. 580(11), 2006
PMID: 16643903
Transcriptional regulation of the Staphylococcus aureus thioredoxin and thioredoxin reductase genes in response to oxygen and disulfide stress.
Uziel O, Borovok I, Schreiber R, Cohen G, Aharonowitz Y., J. Bacteriol. 186(2), 2004
PMID: 14702300
Uziel O, Borovok I, Schreiber R, Cohen G, Aharonowitz Y., J. Bacteriol. 186(2), 2004
PMID: 14702300
How high G+C Gram-positive bacteria and in particular bifidobacteria cope with heat stress: protein players and regulators.
Ventura M, Canchaya C, Zhang Z, Bernini V, Fitzgerald GF, van Sinderen D., FEMS Microbiol. Rev. 30(5), 2006
PMID: 16911042
Ventura M, Canchaya C, Zhang Z, Bernini V, Fitzgerald GF, van Sinderen D., FEMS Microbiol. Rev. 30(5), 2006
PMID: 16911042
The sufR gene (sll0088 in Synechocystis sp. strain PCC 6803) functions as a repressor of the sufBCDS operon in iron-sulfur cluster biogenesis in cyanobacteria.
Wang T, Shen G, Balasubramanian R, McIntosh L, Bryant DA, Golbeck JH., J. Bacteriol. 186(4), 2004
PMID: 14761990
Wang T, Shen G, Balasubramanian R, McIntosh L, Bryant DA, Golbeck JH., J. Bacteriol. 186(4), 2004
PMID: 14761990
Cysteine desulfurase activity indicates a role for NIFS in metallocluster biosynthesis.
Zheng L, White RH, Cash VL, Jack RF, Dean DR., Proc. Natl. Acad. Sci. U.S.A. 90(7), 1993
PMID: 8464885
Zheng L, White RH, Cash VL, Jack RF, Dean DR., Proc. Natl. Acad. Sci. U.S.A. 90(7), 1993
PMID: 8464885
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 17483229
PubMed | Europe PMC
Suchen in