Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw

Hahnke S, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2014)
Journal of Biotechnology 184: 199-200.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Abstract / Bemerkung
The bacterium Clostridium bornimense M2/40 is a mesophilic, anaerobic bacterium isolated from a two-phase biogas reactor continuously fed with maize silage and 5% wheat straw. Grown on glucose, it produced H-2, CO2, formiate, lactate and propionate as the main fermentation products, of which some compounds serve as substrates for methanogenic Archaea to form methane. Here, the whole genome sequence of the bacterium consisting of two circular replicons is reported. This genome information provides the basis for further studies addressing metabolic features of the isolate and its role in anaerobic biomass degradation. (C) 2014 Elsevier B.V. All rights reserved.
Stichworte
Biomass degradation; Clostridium; Anaerobic digestion; Biomethanation; Chromid
Erscheinungsjahr
2014
Zeitschriftentitel
Journal of Biotechnology
Band
184
Seite(n)
199-200
ISSN
0168-1656
Page URI
https://pub.uni-bielefeld.de/record/2694915

Zitieren

Hahnke S, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A. Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw. Journal of Biotechnology. 2014;184:199-200.
Hahnke, S., Wibberg, D., Geizecler, T., Pühler, A., Klocke, M., & Schlüter, A. (2014). Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw. Journal of Biotechnology, 184, 199-200. doi:10.1016/j.jbiotec.2014.05.026
Hahnke, Sarah, Wibberg, Daniel, Geizecler, Tomazetto, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. 2014. “Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw”. Journal of Biotechnology 184: 199-200.
Hahnke, S., Wibberg, D., Geizecler, T., Pühler, A., Klocke, M., and Schlüter, A. (2014). Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw. Journal of Biotechnology 184, 199-200.
Hahnke, S., et al., 2014. Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw. Journal of Biotechnology, 184, p 199-200.
S. Hahnke, et al., “Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw”, Journal of Biotechnology, vol. 184, 2014, pp. 199-200.
Hahnke, S., Wibberg, D., Geizecler, T., Pühler, A., Klocke, M., Schlüter, A.: Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw. Journal of Biotechnology. 184, 199-200 (2014).
Hahnke, Sarah, Wibberg, Daniel, Geizecler, Tomazetto, Pühler, Alfred, Klocke, Michael, and Schlüter, Andreas. “Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw”. Journal of Biotechnology 184 (2014): 199-200.

4 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor.
Tomazetto G, Hahnke S, Langer T, Wibberg D, Blom J, Maus I, Pühler A, Klocke M, Schlüter A., J Biotechnol 257(), 2017
PMID: 28595834
Pan-Cellulosomics of Mesophilic Clostridia: Variations on a Theme.
Dassa B, Borovok I, Lombard V, Henrissat B, Lamed R, Bayer EA, Moraïs S., Microorganisms 5(4), 2017
PMID: 29156585
Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor.
Hahnke S, Maus I, Wibberg D, Tomazetto G, Pühler A, Klocke M, Schlüter A., J Biotechnol 193(), 2015
PMID: 25444871

14 References

Daten bereitgestellt von Europe PubMed Central.

Clostridium bornimense, sp. nov., isolated from a mesophilic two-phase lab-scale biogas reactor
Hahnke, Int. J. Syst. Evol. Microbiol. (), 2014
Introducing the bacterial 'chromid': not a chromosome, not a plasmid.
Harrison PW, Lower RP, Kim NK, Young JP., Trends Microbiol. 18(4), 2010
PMID: 20080407
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor.
Krause L, Diaz NN, Edwards RA, Gartemann KH, Kromeke H, Neuweger H, Puhler A, Runte KJ, Schluter A, Stoye J, Szczepanowski R, Tauch A, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18611419
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing.
Krober M, Bekel T, Diaz NN, Goesmann A, Jaenicke S, Krause L, Miller D, Runte KJ, Viehover P, Puhler A, Schluter A., J. Biotechnol. 142(1), 2009
PMID: 19480946
High-quality genome sequence of Pichia pastoris CBS7435.
Kuberl A, Schneider J, Thallinger GG, Anderl I, Wibberg D, Hajek T, Jaenicke S, Brinkrolf K, Goesmann A, Szczepanowski R, Puhler A, Schwab H, Glieder A, Pichler H., J. Biotechnol. 154(4), 2011
PMID: 21575661
Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant.
Maus I, Wibberg D, Stantscheff R, Cibis K, Eikmeyer FG, Konig H, Puhler A, Schluter A., J. Biotechnol. 168(4), 2013
PMID: 24184088
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Novel upflow anaerobic solid-state (UASS) reactor.
Mumme J, Linke B, Tolle R., Bioresour. Technol. 101(2), 2009
PMID: 19748268
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing.
Rademacher A, Zakrzewski M, Schluter A, Schonberg M, Szczepanowski R, Goesmann A, Puhler A, Klocke M., FEMS Microbiol. Ecol. 79(3), 2011
PMID: 22126587
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology.
Schluter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann KH, Krahn I, Krause L, Kromeke H, Kruse O, Mussgnug JH, Neuweger H, Niehaus K, Puhler A, Runte KJ, Szczepanowski R, Tauch A, Tilker A, Viehover P, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18597880
Genome sequence of the cellulosome-producing mesophilic organism Clostridium cellulovorans 743B.
Tamaru Y, Miyake H, Kuroda K, Nakanishi A, Kawade Y, Yamamoto K, Uemura M, Fujita Y, Doi RH, Ueda M., J. Bacteriol. 192(3), 2009
PMID: 19948806
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.
Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A, Setubal JC, Schmitt R, Puhler A, Schluter A., J. Biotechnol. 155(1), 2011
PMID: 21329740
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing.
Zakrzewski M, Goesmann A, Jaenicke S, Junemann S, Eikmeyer F, Szczepanowski R, Al-Soud WA, Sorensen S, Puhler A, Schluter A., J. Biotechnol. 158(4), 2012
PMID: 22342600
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 24905146
PubMed | Europe PMC

Suchen in

Google Scholar