Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants
Maus I, Wibberg D, Stantscheff R, Stolze Y, Blom J, Eikmeyer FG, Fracowiak J, König H, Pühler A, Schlüter A (2015)
Journal of Biotechnology 201: 43-53.
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Autor*in
Maus, IrenaUniBi;
Wibberg, DanielUniBi;
Stantscheff, Robbin;
Stolze, YvonneUniBi;
Blom, Jochen;
Eikmeyer, Felix GregorUniBi 
;
Fracowiak, Jochen;
König, Helmut;
Pühler, AlfredUniBi ;
Schlüter, AndreasUniBi
;
Fracowiak, Jochen;
König, Helmut;
Pühler, AlfredUniBi ;
Schlüter, AndreasUniBi Einrichtung
Abstract / Bemerkung
The final step of the biogas production process, the methanogenesis, is frequently dominated by members of the genus Methanoculleus. In particular, the species Methanoculleus bourgensis was identified to play a role in different biogas reactor systems. The genome of the type strain M. bourgensis MS2(T), originally isolated from a sewage sludge digestor, was completely sequenced to analyze putative adaptive genome features conferring competitiveness within biogas reactor environments to the strain. Sequencing and assembly of the M. bourgensis MS2(T) genome yielded a chromosome with a size of 2,789,773 bp. Comparative analysis of M. bourgensis MS2(T) and Methanoculleus marisnigri JR1 revealed significant similarities. The absence of genes for a putative ammonium uptake system may indicate that M. bourgensis MS2(T) is adapted to environments rich in ammonium/ammonia. Specific genes featuring predicted functions in the context of osmolyte production were detected in the genome of M. bourgensis MS2(T). Mapping of metagenome sequences derived from a production-scale biogas plant revealed that M. bourgensis MS2(T) almost completely comprises the genetic information of dominant methanogens present in the biogas reactor analyzed. Hence, availability of the M. bourgensis MS2(T) genome sequence may be valuable regarding further research addressing the performance of Methanoculleus species in agricultural biogas plants. (C) 2014 Elsevier B.V. All rights reserved.
Stichworte
Methanomicrobiales;
Nitrogen metabolism;
Metagenome;
Archaea;
Compatible solute
Erscheinungsjahr
2015
Zeitschriftentitel
Journal of Biotechnology
Band
201
Seite(n)
43-53
ISSN
0168-1656
Page URI
https://pub.uni-bielefeld.de/record/2733509
Zitieren
Maus I, Wibberg D, Stantscheff R, et al. Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants. Journal of Biotechnology. 2015;201:43-53.
Maus, I., Wibberg, D., Stantscheff, R., Stolze, Y., Blom, J., Eikmeyer, F. G., Fracowiak, J., et al. (2015). Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants. Journal of Biotechnology, 201, 43-53. doi:10.1016/j.jbiotec.2014.11.020
Maus, Irena, Wibberg, Daniel, Stantscheff, Robbin, Stolze, Yvonne, Blom, Jochen, Eikmeyer, Felix Gregor, Fracowiak, Jochen, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. 2015. “Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants”. Journal of Biotechnology 201: 43-53.
Maus, I., Wibberg, D., Stantscheff, R., Stolze, Y., Blom, J., Eikmeyer, F. G., Fracowiak, J., König, H., Pühler, A., and Schlüter, A. (2015). Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants. Journal of Biotechnology 201, 43-53.
Maus, I., et al., 2015. Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants. Journal of Biotechnology, 201, p 43-53.
I. Maus, et al., “Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants”, Journal of Biotechnology, vol. 201, 2015, pp. 43-53.
Maus, I., Wibberg, D., Stantscheff, R., Stolze, Y., Blom, J., Eikmeyer, F.G., Fracowiak, J., König, H., Pühler, A., Schlüter, A.: Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants. Journal of Biotechnology. 201, 43-53 (2015).
Maus, Irena, Wibberg, Daniel, Stantscheff, Robbin, Stolze, Yvonne, Blom, Jochen, Eikmeyer, Felix Gregor, Fracowiak, Jochen, König, Helmut, Pühler, Alfred, and Schlüter, Andreas. “Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants”. Journal of Biotechnology 201 (2015): 43-53.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
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