The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins

Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, et al. (2003)
Journal of Biotechnology 104(1-3): 5-25.

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Abstract / Bemerkung
The complete genomic sequence of Corynebacterium glutainicum ATCC 13032, well-known in industry for the production of amino acids, e.g. of L-glutamate and L-lysine was determined. The C glutamician genome was found to consist of a single circular chromosome comprising 3 282 708 base pairs. Several DNA regions of unusual composition were identified that were potentially acquired by horizontal gene transfer, e.g. a segment of DNA from C diphtheriae and a prophage-containing region. After automated and manual annotation, 3002 protein-coding genes have been identified, and to 2489 of these, functions were assigned by homologies to known proteins. These analyses confirm the taxonomic position of C glutamicum as related to Mycobacteria and show a broad metabolic diversity as expected for a bacterium living in the soil. As an example for biotechnological application the complete genome sequence was used to reconstruct the metabolic flow of carbon into a number of industrially important products derived from the amino acid L-aspartate. (C) 2003 Elsevier B.V. All rights reserved.
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Journal of Biotechnology
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104
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1-3
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5-25
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Kalinowski J, Bathe B, Bartels D, et al. The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology. 2003;104(1-3):5-25.
Kalinowski, J., Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., et al. (2003). The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology, 104(1-3), 5-25. doi:10.1016/S0168-1656(03)00154-8
Kalinowski, J., Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B. J., Gaigalat, L., et al. (2003). The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology 104, 5-25.
Kalinowski, J., et al., 2003. The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology, 104(1-3), p 5-25.
J. Kalinowski, et al., “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins”, Journal of Biotechnology, vol. 104, 2003, pp. 5-25.
Kalinowski, J., Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B.J., Gaigalat, L., Goesmann, A., Hartmann, M., Huthmacher, K., Kramer, R., Linke, B., McHardy, A.C., Meyer, F., Mockel, B., Pfefferle, W., Pühler, A., Rey, D.A., Rückert, C., Rupp, O., Sahm, H., Wendisch, V.F., Wiegrabe, I., Tauch, A.: The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. Journal of Biotechnology. 104, 5-25 (2003).
Kalinowski, Jörn, Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B. J., Gaigalat, L., Goesmann, Alexander, Hartmann, M., Huthmacher, K., Kramer, R., Linke, Burkhard, McHardy, A. C., Meyer, F., Mockel, B., Pfefferle, W., Pühler, Alfred, Rey, D. A., Rückert, Christian, Rupp, O., Sahm, H., Wendisch, Volker F., Wiegrabe, I., and Tauch, Andreas. “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins”. Journal of Biotechnology 104.1-3 (2003): 5-25.

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Trötschel C, Albaum SP, Poetsch A., Microb Biotechnol 6(6), 2013
PMID: 23425033
Maltose uptake by the novel ABC transport system MusEFGK2I causes increased expression of ptsG in Corynebacterium glutamicum.
Henrich A, Kuhlmann N, Eck AW, Krämer R, Seibold GM., J Bacteriol 195(11), 2013
PMID: 23543710
The role of ARGR repressor regulation on L-arginine production in Corynebacterium crenatum.
Xu M, Rao Z, Dou W, Xu Z., Appl Biochem Biotechnol 170(3), 2013
PMID: 23564434
Proteome response of Corynebacterium glutamicum to high concentration of industrially relevant C₄ and C₅ dicarboxylic acids.
Vasco-Cárdenas MF, Baños S, Ramos A, Martín JF, Barreiro C., J Proteomics 85(), 2013
PMID: 23624027
Strain optimization for efficient isobutanol production using Corynebacterium glutamicum under oxygen deprivation.
Yamamoto S, Suda M, Niimi S, Inui M, Yukawa H., Biotechnol Bioeng 110(11), 2013
PMID: 23737329
Ornithine cyclodeaminase-based proline production by Corynebacterium glutamicum.
Jensen JV, Wendisch VF., Microb Cell Fact 12(), 2013
PMID: 23806148
Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnology.
Baumgart M, Unthan S, Rückert C, Sivalingam J, Grünberger A, Kalinowski J, Bott M, Noack S, Frunzke J., Appl Environ Microbiol 79(19), 2013
PMID: 23892752
C1 metabolism in Corynebacterium glutamicum: an endogenous pathway for oxidation of methanol to carbon dioxide.
Witthoff S, Mühlroth A, Marienhagen J, Bott M., Appl Environ Microbiol 79(22), 2013
PMID: 24014532
Current knowledge on mycolic acids in Corynebacterium glutamicum and their relevance for biotechnological processes.
Lanéelle MA, Tropis M, Daffé M., Appl Microbiol Biotechnol 97(23), 2013
PMID: 24113823
A novel type of N-acetylglutamate synthase is involved in the first step of arginine biosynthesis in Corynebacterium glutamicum.
Petri K, Walter F, Persicke M, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24138314
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032.
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24138339
Systems metabolic engineering of Corynebacterium glutamicum for production of the chemical chaperone ectoine.
Becker J, Schäfer R, Kohlstedt M, Harder BJ, Borchert NS, Stöveken N, Bremer E, Wittmann C., Microb Cell Fact 12(), 2013
PMID: 24228689
Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique.
Pfeifer-Sancar K, Mentz A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24341750
Genome shuffling improves thermotolerance and glutamic acid production of Corynebacteria glutamicum.
Zheng P, Liu M, Liu XD, Du QY, Ni Y, Sun ZH., World J Microbiol Biotechnol 28(3), 2012
PMID: 22805825
Efficient aerobic succinate production from glucose in minimal medium with Corynebacterium glutamicum.
Litsanov B, Kabus A, Brocker M, Bott M., Microb Biotechnol 5(1), 2012
PMID: 22018023
Corynebacterium glutamicum as a potent biocatalyst for the bioconversion of pentose sugars to value-added products.
Gopinath V, Murali A, Dhar KS, Nampoothiri KM., Appl Microbiol Biotechnol 93(1), 2012
PMID: 22094976
Biochemical disclosure of the mycolate outer membrane of Corynebacterium glutamicum.
Marchand CH, Salmeron C, Bou Raad R, Méniche X, Chami M, Masi M, Blanot D, Daffé M, Tropis M, Huc E, Le Maréchal P, Decottignies P, Bayan N., J Bacteriol 194(3), 2012
PMID: 22123248
Biotin protein ligase from Corynebacterium glutamicum: role for growth and L: -lysine production.
Peters-Wendisch P, Stansen KC, Götker S, Wendisch VF., Appl Microbiol Biotechnol 93(6), 2012
PMID: 22159614
Arabitol metabolism of Corynebacterium glutamicum and its regulation by AtlR.
Laslo T, von Zaluskowski P, Gabris C, Lodd E, Rückert C, Dangel P, Kalinowski J, Auchter M, Seibold G, Eikmanns BJ., J Bacteriol 194(5), 2012
PMID: 22178972
Corynebacterium glutamicum whcB, a stationary phase-specific regulatory gene.
Lee JY, Park JS, Kim HJ, Kim Y, Lee HS., FEMS Microbiol Lett 327(2), 2012
PMID: 22098456
A novel mycolic acid species defines two novel genera of the Actinobacteria, Hoyosella and Amycolicicoccus.
Lanéelle MA, Launay A, Spina L, Marrakchi H, Laval F, Eynard N, Lemassu A, Tropis M, Daffé M, Etienne G., Microbiology 158(pt 3), 2012
PMID: 22194354
Genome-scale metabolic representation of Amycolatopsis balhimycina.
Vongsangnak W, Figueiredo LF, Förster J, Weber T, Thykaer J, Stegmann E, Wohlleben W, Nielsen J., Biotechnol Bioeng 109(7), 2012
PMID: 22252737
PIPS: pathogenicity island prediction software.
Soares SC, Abreu VA, Ramos RT, Cerdeira L, Silva A, Baumbach J, Trost E, Tauch A, Hirata R, Mattos-Guaraldi AL, Miyoshi A, Azevedo V., PLoS One 7(2), 2012
PMID: 22355329
Genome shuffling improves thermotolerance and glutamic acid production of Corynebacteria glutamicum
Zheng P, Liu M, Liu Xd, Du Qy, Ni Y, Sun Zh., World J Microbiol Biotechnol 28(3), 2012
PMID: IND44746219
Lactate utilization is regulated by the FadR-type regulator LldR in Pseudomonas aeruginosa.
Gao C, Hu C, Zheng Z, Ma C, Jiang T, Dou P, Zhang W, Che B, Wang Y, Lv M, Xu P., J Bacteriol 194(10), 2012
PMID: 22408166
Improved L-lysine production with Corynebacterium glutamicum and systemic insight into citrate synthase flux and activity.
van Ooyen J, Noack S, Bott M, Reth A, Eggeling L., Biotechnol Bioeng 109(8), 2012
PMID: 22392073
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A., BMC Genomics 13(), 2012
PMID: 22443545
Metabolic engineering and flux analysis of Corynebacterium glutamicum for L-serine production.
Lai S, Zhang Y, Liu S, Liang Y, Shang X, Chai X, Wen T., Sci China Life Sci 55(4), 2012
PMID: 22566084
Protein turnover quantification in a multilabeling approach: from data calculation to evaluation.
Trötschel C, Albaum SP, Wolff D, Schröder S, Goesmann A, Nattkemper TW, Poetsch A., Mol Cell Proteomics 11(8), 2012
PMID: 22493176
Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia.
Trost E, Blom J, Soares Sde C, Huang IH, Al-Dilaimi A, Schröder J, Jaenicke S, Dorella FA, Rocha FS, Miyoshi A, Azevedo V, Schneider MP, Silva A, Camello TC, Sabbadini PS, Santos CS, Santos LS, Hirata R, Mattos-Guaraldi AL, Efstratiou A, Schmitt MP, Ton-That H, Tauch A., J Bacteriol 194(12), 2012
PMID: 22505676
Purification and structural characterization of siderophore (corynebactin) from Corynebacterium diphtheriae.
Zajdowicz S, Haller JC, Krafft AE, Hunsucker SW, Mant CT, Duncan MW, Hodges RS, Jones DN, Holmes RK., PLoS One 7(4), 2012
PMID: 22514641
Phenylacetic acid catabolism and its transcriptional regulation in Corynebacterium glutamicum.
Chen X, Kohl TA, Rückert C, Rodionov DA, Li LH, Ding JY, Kalinowski J, Liu SJ., Appl Environ Microbiol 78(16), 2012
PMID: 22685150
Postgenomic approaches to using corynebacteria as biocatalysts.
Vertès AA, Inui M, Yukawa H., Annu Rev Microbiol 66(), 2012
PMID: 22803796
Altered large-ring cyclodextrin product profile due to a mutation at Tyr-172 in the amylomaltase of Corynebacterium glutamicum.
Srisimarat W, Kaulpiboon J, Krusong K, Zimmermann W, Pongsawasdi P., Appl Environ Microbiol 78(20), 2012
PMID: 22865069
Complete genome sequence of Saccharothrix espanaensis DSM 44229(T) and comparison to the other completely sequenced Pseudonocardiaceae.
Strobel T, Al-Dilaimi A, Blom J, Gessner A, Kalinowski J, Luzhetska M, Pühler A, Szczepanowski R, Bechthold A, Rückert C., BMC Genomics 13(), 2012
PMID: 22958348
Carotenoid biosynthesis and overproduction in Corynebacterium glutamicum.
Heider SA, Peters-Wendisch P, Wendisch VF., BMC Microbiol 12(), 2012
PMID: 22963379
Sialic acid utilization by the soil bacterium Corynebacterium glutamicum.
Gruteser N, Marin K, Krämer R, Thomas GH., FEMS Microbiol Lett 336(2), 2012
PMID: 22924979
The two-component system ChrSA is crucial for haem tolerance and interferes with HrrSA in haem-dependent gene regulation in Corynebacterium glutamicum.
Heyer A, Gätgens C, Hentschel E, Kalinowski J, Bott M, Frunzke J., Microbiology 158(pt 12), 2012
PMID: 23038807
Metabolic engineering of Corynebacterium glutamicum aimed at alternative carbon sources and new products.
Zahoor A, Lindner SN, Wendisch VF., Comput Struct Biotechnol J 3(), 2012
PMID: 24688664
Analysis of in vivo function of predicted isoenzymes:a metabolomic approach.
Choorapoikayil S, Schoepe J, Buchinger S, Schomburg D., OMICS 16(12), 2012
PMID: 23215805
Genome sequence of the halotolerant bacterium Corynebacterium halotolerans type strain YIM 70093(T) (= DSM 44683(T)).
Rückert C, Albersmeier A, Al-Dilaimi A, Niehaus K, Szczepanowski R, Kalinowski J., Stand Genomic Sci 7(2), 2012
PMID: 23408721
Identification of the membrane protein SucE and its role in succinate transport in Corynebacterium glutamicum.
Huhn S, Jolkver E, Krämer R, Marin K., Appl Microbiol Biotechnol 89(2), 2011
PMID: 20809072
Multiple-genome comparison reveals new loci for Mycobacterium species identification.
Dai J, Chen Y, Dean S, Morris JG, Salfinger M, Johnson JA., J Clin Microbiol 49(1), 2011
PMID: 21048007
From zero to hero--design-based systems metabolic engineering of Corynebacterium glutamicum for L-lysine production.
Becker J, Zelder O, Häfner S, Schröder H, Wittmann C., Metab Eng 13(2), 2011
PMID: 21241816
Fatty acid biosynthesis in actinomycetes.
Gago G, Diacovich L, Arabolaza A, Tsai SC, Gramajo H., FEMS Microbiol Rev 35(3), 2011
PMID: 21204864
Control of adhA and sucR expression by the SucR regulator in Corynebacterium glutamicum.
Auchter M, Laslo T, Fleischer C, Schiller L, Arndt A, Gaigalat L, Kalinowski J, Eikmanns BJ., J Biotechnol 152(3), 2011
PMID: 21320555
Diversity of metabolic shift in response to oxygen deprivation in Corynebacterium glutamicum and its close relatives.
Yamamoto S, Sakai M, Inui M, Yukawa H., Appl Microbiol Biotechnol 90(3), 2011
PMID: 21327408
The ncgl1108 (PheP (Cg)) gene encodes a new L-Phe transporter in Corynebacterium glutamicum.
Zhao Z, Ding JY, Li T, Zhou NY, Liu SJ., Appl Microbiol Biotechnol 90(6), 2011
PMID: 21468701
Tools for genetic manipulations in Corynebacterium glutamicum and their applications.
Nešvera J, Pátek M., Appl Microbiol Biotechnol 90(5), 2011
PMID: 21519933
Purification and characterization of an arginine regulatory protein, ArgR, in Corynebacterium glutamicum.
Yim SH, Jung S, Lee SK, Cheon CI, Song E, Lee SS, Shin J, Lee MS., J Ind Microbiol Biotechnol 38(12), 2011
PMID: 21559975
Proteomics of corynebacteria: From biotechnology workhorses to pathogens.
Poetsch A, Haussmann U, Burkovski A., Proteomics 11(15), 2011
PMID: 21674800
Genome sequence of Corynebacterium nuruki S6-4 T, isolated from alcohol fermentation starter.
Shin NR, Whon TW, Roh SW, Kim MS, Jung MJ, Lee J, Bae JW., J Bacteriol 193(16), 2011
PMID: 21685278
Diversity-oriented production of metabolites derived from chorismate and their use in organic synthesis.
Bongaerts J, Esser S, Lorbach V, Al-Momani L, Müller MA, Franke D, Grondal C, Kurutsch A, Bujnicki R, Takors R, Raeven L, Wubbolts M, Bovenberg R, Nieger M, Schürmann M, Trachtmann N, Kozak S, Sprenger GA, Müller M., Angew Chem Int Ed Engl 50(34), 2011
PMID: 21739551
Amino acid production from rice straw and wheat bran hydrolysates by recombinant pentose-utilizing Corynebacterium glutamicum.
Gopinath V, Meiswinkel TM, Wendisch VF, Nampoothiri KM., Appl Microbiol Biotechnol 92(5), 2011
PMID: 21796382
The glgB-encoded glycogen branching enzyme is essential for glycogen accumulation in Corynebacterium glutamicum.
Seibold GM, Breitinger KJ, Kempkes R, Both L, Krämer M, Dempf S, Eikmanns BJ., Microbiology 157(pt 11), 2011
PMID: 21903753
Growth independent rhamnolipid production from glucose using the non-pathogenic Pseudomonas putida KT2440.
Wittgens A, Tiso T, Arndt TT, Wenk P, Hemmerich J, Müller C, Wichmann R, Küpper B, Zwick M, Wilhelm S, Hausmann R, Syldatk C, Rosenau F, Blank LM., Microb Cell Fact 10(), 2011
PMID: 21999513
Characterization of an adenylate cyclase gene (cyaB) deletion mutant of Corynebacterium glutamicum ATCC 13032.
Cha PH, Park SY, Moon MW, Subhadra B, Oh TK, Kim E, Kim JF, Lee JK., Appl Microbiol Biotechnol 85(4), 2010
PMID: 19568747
Recombinant organisms for production of industrial products.
Adrio JL, Demain AL., Bioeng Bugs 1(2), 2010
PMID: 21326937
Requirement of de novo synthesis of the OdhI protein in penicillin-induced glutamate production by Corynebacterium glutamicum.
Kim J, Fukuda H, Hirasawa T, Nagahisa K, Nagai K, Wachi M, Shimizu H., Appl Microbiol Biotechnol 86(3), 2010
PMID: 19956942
Xylitol production by recombinant Corynebacterium glutamicum under oxygen deprivation.
Sasaki M, Jojima T, Inui M, Yukawa H., Appl Microbiol Biotechnol 86(4), 2010
PMID: 20012280
Biotechnological production of enantiomeric pure lactic acid from renewable resources: recent achievements, perspectives, and limits.
Okano K, Tanaka T, Ogino C, Fukuda H, Kondo A., Appl Microbiol Biotechnol 85(3), 2010
PMID: 19826806
The Zur regulon of Corynebacterium glutamicum ATCC 13032.
Schröder J, Jochmann N, Rodionov DA, Tauch A., BMC Genomics 11(), 2010
PMID: 20055984
The transcriptional regulators RamA and RamB are involved in the regulation of glycogen synthesis in Corynebacterium glutamicum.
Seibold GM, Hagmann CT, Schietzel M, Emer D, Auchter M, Schreiner J, Eikmanns BJ., Microbiology 156(pt 4), 2010
PMID: 20056699
Adaptation of Corynebacterium glutamicum to salt-stress conditions.
Fränzel B, Trötschel C, Rückert C, Kalinowski J, Poetsch A, Wolters DA., Proteomics 10(3), 2010
PMID: 19950167
Transcriptional regulation of histidine biosynthesis genes in Corynebacterium glutamicum.
Jung S, Chun JY, Yim SH, Lee SS, Cheon CI, Song E, Lee MS., Can J Microbiol 56(2), 2010
PMID: 20237580
Polyphosphate/ATP-dependent NAD kinase of Corynebacterium glutamicum: biochemical properties and impact of ppnK overexpression on lysine production.
Lindner SN, Niederholtmeyer H, Schmitz K, Schoberth SM, Wendisch VF., Appl Microbiol Biotechnol 87(2), 2010
PMID: 20180116
Rational design for over-production of desirable microbial metabolites by precision engineering.
Gao H, Zhou X, Gou Z, Zhuo Y, Fu C, Liu M, Song F, Ashforth E, Zhang L., Antonie Van Leeuwenhoek 98(2), 2010
PMID: 20401739
Penicillin-binding protein folding is dependent on the PrsA peptidyl-prolyl cis-trans isomerase in Bacillus subtilis.
Hyyryläinen HL, Marciniak BC, Dahncke K, Pietiäinen M, Courtin P, Vitikainen M, Seppala R, Otto A, Becher D, Chapot-Chartier MP, Kuipers OP, Kontinen VP., Mol Microbiol 77(1), 2010
PMID: 20487272
Utilization of phenol and naphthalene affects synthesis of various amino acids in Corynebacterium glutamicum.
Lee SY, Le TH, Chang ST, Park JS, Kim YH, Min J., Curr Microbiol 61(6), 2010
PMID: 20443004
OdhI dephosphorylation kinetics during different glutamate production processes involving Corynebacterium glutamicum.
Boulahya KA, Guedon E, Delaunay S, Schultz C, Boudrant J, Bott M, Goergen JL., Appl Microbiol Biotechnol 87(5), 2010
PMID: 20449744
Regulation of the expression of genes involved in NAD de novo biosynthesis in Corynebacterium glutamicum.
Teramoto H, Suda M, Inui M, Yukawa H., Appl Environ Microbiol 76(16), 2010
PMID: 20601509
Phosphorylation of a novel cytoskeletal protein (RsmP) regulates rod-shaped morphology in Corynebacterium glutamicum.
Fiuza M, Letek M, Leiba J, Villadangos AF, Vaquera J, Zanella-Cléon I, Mateos LM, Molle V, Gil JA., J Biol Chem 285(38), 2010
PMID: 20622015
L-Glutamine as a nitrogen source for Corynebacterium glutamicum: derepression of the AmtR regulon and implications for nitrogen sensing.
Rehm N, Georgi T, Hiery E, Degner U, Schmiedl A, Burkovski A, Bott M., Microbiology 156(pt 10), 2010
PMID: 20656783
Corynebacterium glutamicum exhibits a membrane-related response to a small ferrocene-conjugated antimicrobial peptide.
Fränzel B, Frese C, Penkova M, Metzler-Nolte N, Bandow JE, Wolters DA., J Biol Inorg Chem 15(8), 2010
PMID: 20658302
Multilocus sequence typing identifies evidence for recombination and two distinct lineages of Corynebacterium diphtheriae.
Bolt F, Cassiday P, Tondella ML, Dezoysa A, Efstratiou A, Sing A, Zasada A, Bernard K, Guiso N, Badell E, Rosso ML, Baldwin A, Dowson C., J Clin Microbiol 48(11), 2010
PMID: 20844217
Identification and quantification of mycothiol in Actinobacteria by a novel enzymatic method.
Yin YJ, Wang BJ, Jiang CY, Luo YM, Jin JH, Liu SJ., Appl Microbiol Biotechnol 88(6), 2010
PMID: 20922372
The arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese.
Monnet C, Loux V, Gibrat JF, Spinnler E, Barbe V, Vacherie B, Gavory F, Gourbeyre E, Siguier P, Chandler M, Elleuch R, Irlinger F, Vallaeys T., PLoS One 5(11), 2010
PMID: 21124797
Quinone-dependent D-lactate dehydrogenase Dld (Cg1027) is essential for growth of Corynebacterium glutamicum on D-lactate.
Kato O, Youn JW, Stansen KC, Matsui D, Oikawa T, Wendisch VF., BMC Microbiol 10(), 2010
PMID: 21159175
Effect of odhA overexpression and odhA antisense RNA expression on Tween-40-triggered glutamate production by Corynebacterium glutamicum.
Kim J, Hirasawa T, Sato Y, Nagahisa K, Furusawa C, Shimizu H., Appl Microbiol Biotechnol 81(6), 2009
PMID: 18923827
A combination of metabolome and transcriptome analyses reveals new targets of the Corynebacterium glutamicum nitrogen regulator AmtR.
Buchinger S, Strösser J, Rehm N, Hänssler E, Hans S, Bathe B, Schomburg D, Krämer R, Burkovski A., J Biotechnol 140(1-2), 2009
PMID: 19041910
Myo-inositol facilitators IolT1 and IolT2 enhance D-mannitol formation from D-fructose in Corynebacterium glutamicum.
Bäumchen C, Krings E, Bringer S, Eggeling L, Sahm H., FEMS Microbiol Lett 290(2), 2009
PMID: 19054080
Acetohydroxyacid synthase, a novel target for improvement of L-lysine production by Corynebacterium glutamicum.
Blombach B, Hans S, Bathe B, Eikmanns BJ., Appl Environ Microbiol 75(2), 2009
PMID: 19047397
TatABC overexpression improves Corynebacterium glutamicum Tat-dependent protein secretion.
Kikuchi Y, Itaya H, Date M, Matsui K, Wu LF., Appl Environ Microbiol 75(3), 2009
PMID: 19074606
Crystallization and preliminary crystallographic analysis of cgHle, a homoserine acetyltransferase homologue, from Corynebacterium glutamicum.
Tölzer C, Pal S, Watzlawick H, Altenbuchner J, Niefind K., Acta Crystallogr Sect F Struct Biol Cryst Commun 65(pt 1), 2009
PMID: 19153452
Pathway identification combining metabolic flux and functional genomics analyses: acetate and propionate activation by Corynebacterium glutamicum.
Veit A, Rittmann D, Georgi T, Youn JW, Eikmanns BJ, Wendisch VF., J Biotechnol 140(1-2), 2009
PMID: 19162097
Elastase digests: new ammunition for shotgun membrane proteomics.
Rietschel B, Arrey TN, Meyer B, Bornemann S, Schuerken M, Karas M, Poetsch A., Mol Cell Proteomics 8(5), 2009
PMID: 19116210
Characterization of the LacI-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032.
Nentwich SS, Brinkrolf K, Gaigalat L, Hüser AT, Rey DA, Mohrbach T, Marin K, Pühler A, Tauch A, Kalinowski J., Microbiology 155(pt 1), 2009
PMID: 19118356
Microarray studies reveal a 'differential response' to moderate or severe heat shock of the HrcA- and HspR-dependent systems in Corynebacterium glutamicum.
Barreiro C, Nakunst D, Hüser AT, de Paz HD, Kalinowski J, Martín JF., Microbiology 155(pt 2), 2009
PMID: 19202085
Formation and metabolism of methylmalonyl coenzyme A in Corynebacterium glutamicum.
Botella L, Lindley ND, Eggeling L., J Bacteriol 191(8), 2009
PMID: 19233926
Arsenate reductase, mycothiol, and mycoredoxin concert thiol/disulfide exchange.
Ordóñez E, Van Belle K, Roos G, De Galan S, Letek M, Gil JA, Wyns L, Mateos LM, Messens J., J Biol Chem 284(22), 2009
PMID: 19286650
Exopolyphosphatases PPX1 and PPX2 from Corynebacterium glutamicum.
Lindner SN, Knebel S, Wesseling H, Schoberth SM, Wendisch VF., Appl Environ Microbiol 75(10), 2009
PMID: 19304823
Regulation of ldh expression during biotin-limited growth of Corynebacterium glutamicum.
Dietrich C, Nato A, Bost B, Le Maréchal P, Guyonvarch A., Microbiology 155(pt 4), 2009
PMID: 19332837
Dynamic and structural characterization of a bacterial FHA protein reveals a new autoinhibition mechanism.
Barthe P, Roumestand C, Canova MJ, Kremer L, Hurard C, Molle V, Cohen-Gonsaud M., Structure 17(4), 2009
PMID: 19368890
Identification and functional analysis of the gene cluster for L-arabinose utilization in Corynebacterium glutamicum.
Kawaguchi H, Sasaki M, Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 75(11), 2009
PMID: 19346355
Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays.
Jochmann N, Kurze AK, Czaja LF, Brinkrolf K, Brune I, Hüser AT, Hansmeier N, Pühler A, Borovok I, Tauch A., Microbiology 155(pt 5), 2009
PMID: 19372162
A game with many players: control of gdh transcription in Corynebacterium glutamicum.
Hänssler E, Müller T, Palumbo K, Patek M, Brocker M, Krämer R, Burkovski A., J Biotechnol 142(2), 2009
PMID: 19394370
Engineering of pentose transport in Corynebacterium glutamicum to improve simultaneous utilization of mixed sugars.
Sasaki M, Jojima T, Kawaguchi H, Inui M, Yukawa H., Appl Microbiol Biotechnol 85(1), 2009
PMID: 19529932
Physiological adaptation of Corynebacterium glutamicum to benzoate as alternative carbon source - a membrane proteome-centric view.
Haussmann U, Qi SW, Wolters D, Rögner M, Liu SJ, Poetsch A., Proteomics 9(14), 2009
PMID: 19639586
Characterization of the dicarboxylate transporter DctA in Corynebacterium glutamicum.
Youn JW, Jolkver E, Krämer R, Marin K, Wendisch VF., J Bacteriol 191(17), 2009
PMID: 19581365
Development and experimental verification of a genome-scale metabolic model for Corynebacterium glutamicum.
Shinfuku Y, Sorpitiporn N, Sono M, Furusawa C, Hirasawa T, Shimizu H., Microb Cell Fact 8(), 2009
PMID: 19646286
Visualizing post genomics data-sets on customized pathway maps by ProMeTra-aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example.
Neuweger H, Persicke M, Albaum SP, Bekel T, Dondrup M, Hüser AT, Winnebald J, Schneider J, Kalinowski J, Goesmann A., BMC Syst Biol 3(), 2009
PMID: 19698148
Genomic basis for natural product biosynthetic diversity in the actinomycetes.
Nett M, Ikeda H, Moore BS., Nat Prod Rep 26(11), 2009
PMID: 19844637
Computing the shortest elementary flux modes in genome-scale metabolic networks.
de Figueiredo LF, Podhorski A, Rubio A, Kaleta C, Beasley JE, Schuster S, Planes FJ., Bioinformatics 25(23), 2009
PMID: 19793869
Qupe--a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments.
Albaum SP, Neuweger H, Fränzel B, Lange S, Mertens D, Trötschel C, Wolters D, Kalinowski J, Nattkemper TW, Goesmann A., Bioinformatics 25(23), 2009
PMID: 19808875
Functional genomics of pH homeostasis in Corynebacterium glutamicum revealed novel links between pH response, oxidative stress, iron homeostasis and methionine synthesis.
Follmann M, Ochrombel I, Krämer R, Trötschel C, Poetsch A, Rückert C, Hüser A, Persicke M, Seiferling D, Kalinowski J, Marin K., BMC Genomics 10(), 2009
PMID: 20025733
Engineering of an L-arabinose metabolic pathway in Corynebacterium glutamicum.
Kawaguchi H, Sasaki M, Vertès AA, Inui M, Yukawa H., Appl Microbiol Biotechnol 77(5), 2008
PMID: 17965859
Changes in enzyme activities at the pyruvate node in glutamate-overproducing Corynebacterium glutamicum.
Hasegawa T, Hashimoto K, Kawasaki H, Nakamatsu T., J Biosci Bioeng 105(1), 2008
PMID: 18295714
Secretion of Streptomyces mobaraensis pro-transglutaminase by coryneform bacteria.
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The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing.
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Götker S, Kalinowski J, Kamp PB, Lobo FP, Viehoever P, Weisshaar B, Soriano F, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18367281
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehoever P, Gartemann KH, Arnold W, Blom J, Brinkrolf K, Brune I, Götker S, Weisshaar B, Goesmann A, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18430482
Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350.
Ohnishi Y, Ishikawa J, Hara H, Suzuki H, Ikenoya M, Ikeda H, Yamashita A, Hattori M, Horinouchi S., J Bacteriol 190(11), 2008
PMID: 18375553
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences.
Brinkrolf K, Plöger S, Solle S, Brune I, Nentwich SS, Hüser AT, Kalinowski J, Pühler A, Tauch A., Microbiology 154(pt 4), 2008
PMID: 18375800
Population Heterogeneity in Corynebacterium glutamicum ATCC 13032 caused by prophage CGP3.
Frunzke J, Bramkamp M, Schweitzer JE, Bott M., J Bacteriol 190(14), 2008
PMID: 18487330
Distinct roles of two anaplerotic pathways in glutamate production induced by biotin limitation in Corynebacterium glutamicum.
Sato H, Orishimo K, Shirai T, Hirasawa T, Nagahisa K, Shimizu H, Wachi M., J Biosci Bioeng 106(1), 2008
PMID: 18691531
Metabolic regulation and overproduction of primary metabolites.
Sanchez S, Demain AL., Microb Biotechnol 1(4), 2008
PMID: 21261849
Genome sequence of the lytic bacteriophage P1201 from Corynebacterium glutamicum NCHU 87078: evolutionary relationships to phages from Corynebacterineae.
Chen CL, Pan TY, Kan SC, Kuan YC, Hong LY, Chiu KR, Sheu CS, Yang JS, Hsu WH, Hu HY., Virology 378(2), 2008
PMID: 18599103
Corynebacterium glutamicum contains 3-deoxy-D-arabino-heptulosonate 7-phosphate synthases that display novel biochemical features.
Liu YJ, Li PP, Zhao KX, Wang BJ, Jiang CY, Drake HL, Liu SJ., Appl Environ Microbiol 74(17), 2008
PMID: 18621870
Identification and characterization of the dicarboxylate uptake system DccT in Corynebacterium glutamicum.
Youn JW, Jolkver E, Krämer R, Marin K, Wendisch VF., J Bacteriol 190(19), 2008
PMID: 18658264
Engineering of a glycerol utilization pathway for amino acid production by Corynebacterium glutamicum.
Rittmann D, Lindner SN, Wendisch VF., Appl Environ Microbiol 74(20), 2008
PMID: 18757581
Biosynthesis and functions of mycothiol, the unique protective thiol of Actinobacteria.
Newton GL, Buchmeier N, Fahey RC., Microbiol Mol Biol Rev 72(3), 2008
PMID: 18772286
An efficient succinic acid production process in a metabolically engineered Corynebacterium glutamicum strain.
Okino S, Noburyu R, Suda M, Jojima T, Inui M, Yukawa H., Appl Microbiol Biotechnol 81(3), 2008
PMID: 18777022
Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization.
Gao YG, Suzuki H, Itou H, Zhou Y, Tanaka Y, Wachi M, Watanabe N, Tanaka I, Yao M., Nucleic Acids Res 36(22), 2008
PMID: 18988622
A proteome analysis of the cadmium and mercury response in Corynebacterium glutamicum.
Fanous A, Weiss W, Görg A, Jacob F, Parlar H., Proteomics 8(23-24), 2008
PMID: 18972541
Response of the cytoplasmic and membrane proteome of Corynebacterium glutamicum ATCC 13032 to pH changes.
Barriuso-Iglesias M, Schluesener D, Barreiro C, Poetsch A, Martín JF., BMC Microbiol 8(), 2008
PMID: 19091079
Determination of metabolic flux changes during fed-batch cultivation from measurements of intracellular amino acids by LC-MS/MS.
Iwatani S, Van Dien S, Shimbo K, Kubota K, Kageyama N, Iwahata D, Miyano H, Hirayama K, Usuda Y, Shimizu K, Matsui K., J Biotechnol 128(1), 2007
PMID: 17055605
Role of cytochrome bd oxidase from Corynebacterium glutamicum in growth and lysine production.
Kabus A, Niebisch A, Bott M., Appl Environ Microbiol 73(3), 2007
PMID: 17142369
Engineering primary metabolic pathways of industrial micro-organisms.
Kern A, Tilley E, Hunter IS, Legisa M, Glieder A., J Biotechnol 129(1), 2007
PMID: 17196287
Bacteriophage-based vectors for site-specific insertion of DNA in the chromosome of Corynebacteria.
Oram M, Woolston JE, Jacobson AD, Holmes RK, Oram DM., Gene 391(1-2), 2007
PMID: 17275217
The phosphotransferase system of Corynebacterium glutamicum: features of sugar transport and carbon regulation.
Moon MW, Park SY, Choi SK, Lee JK., J Mol Microbiol Biotechnol 12(1-2), 2007
PMID: 17183210
Nitrogen metabolism and nitrogen control in corynebacteria: variations of a common theme.
Walter B, Hänssler E, Kalinowski J, Burkovski A., J Mol Microbiol Biotechnol 12(1-2), 2007
PMID: 17183220
Bacillus methanolicus: a candidate for industrial production of amino acids from methanol at 50 degrees C.
Brautaset T, Jakobsen ØM, Josefsen KD, Flickinger MC, Ellingsen TE., Appl Microbiol Biotechnol 74(1), 2007
PMID: 17216461
Random segment deletion based on IS31831 and Cre/loxP excision system in Corynebacterium glutamicum.
Tsuge Y, Suzuki N, Inui M, Yukawa H., Appl Microbiol Biotechnol 74(6), 2007
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A proteomic study of Corynebacterium glutamicum AAA+ protease FtsH.
Lüdke A, Krämer R, Burkovski A, Schluesener D, Poetsch A., BMC Microbiol 7(), 2007
PMID: 17254330
The IclR-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum.
Brune I, Jochmann N, Brinkrolf K, Hüser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Pühler A, Tauch A., J Bacteriol 189(7), 2007
PMID: 17259312
The role of laterally transferred genes in adaptive evolution.
Marri PR, Hao W, Golding GB., BMC Evol Biol 7 Suppl 1(), 2007
PMID: 17288581
Systems biology for industrial strains and fermentation processes--example: amino acids.
Takors R, Bathe B, Rieping M, Hans S, Kelle R, Huthmacher K., J Biotechnol 129(2), 2007
PMID: 17367886
Anaerobic growth of Corynebacterium glutamicum using nitrate as a terminal electron acceptor.
Nishimura T, Vertès AA, Shinoda Y, Inui M, Yukawa H., Appl Microbiol Biotechnol 75(4), 2007
PMID: 17347820
The two carboxylases of Corynebacterium glutamicum essential for fatty acid and mycolic acid synthesis.
Gande R, Dover LG, Krumbach K, Besra GS, Sahm H, Oikawa T, Eggeling L., J Bacteriol 189(14), 2007
PMID: 17483212
FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum.
Hänssler E, Müller T, Jessberger N, Völzke A, Plassmeier J, Kalinowski J, Krämer R, Burkovski A., Appl Microbiol Biotechnol 76(3), 2007
PMID: 17483938
Gene expression analysis of Corynebacterium glutamicum subjected to long-term lactic acid adaptation.
Jakob K, Satorhelyi P, Lange C, Wendisch VF, Silakowski B, Scherer S, Neuhaus K., J Bacteriol 189(15), 2007
PMID: 17526706
Transcriptionally regulated adhA gene encodes alcohol dehydrogenase required for ethanol and n-propanol utilization in Corynebacterium glutamicum R.
Kotrbova-Kozak A, Kotrba P, Inui M, Sajdok J, Yukawa H., Appl Microbiol Biotechnol 76(6), 2007
PMID: 17646983
Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.
Ventura M, Canchaya C, Tauch A, Chandra G, Fitzgerald GF, Chater KF, van Sinderen D., Microbiol Mol Biol Rev 71(3), 2007
PMID: 17804669
Site-directed integration system using a combination of mutant lox sites for Corynebacterium glutamicum.
Suzuki N, Inui M, Yukawa H., Appl Microbiol Biotechnol 77(4), 2007
PMID: 17938910
CoryneCenter - an online resource for the integrated analysis of corynebacterial genome and transcriptome data.
Neuweger H, Baumbach J, Albaum S, Bekel T, Dondrup M, Hüser AT, Kalinowski J, Oehm S, Pühler A, Rahmann S, Weile J, Goesmann A., BMC Syst Biol 1(), 2007
PMID: 18034885
Characterization and use of catabolite-repressed promoters from gluconate genes in Corynebacterium glutamicum.
Letek M, Valbuena N, Ramos A, Ordóñez E, Gil JA, Mateos LM., J Bacteriol 188(2), 2006
PMID: 16385030
Two-component systems of Corynebacterium glutamicum: deletion analysis and involvement of the PhoS-PhoR system in the phosphate starvation response.
Kocan M, Schaffer S, Ishige T, Sorger-Herrmann U, Wendisch VF, Bott M., J Bacteriol 188(2), 2006
PMID: 16385062
Emerging Corynebacterium glutamicum systems biology.
Wendisch VF, Bott M, Kalinowski J, Oldiges M, Wiechert W., J Biotechnol 124(1), 2006
PMID: 16406159
CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.
Baumbach J, Brinkrolf K, Czaja LF, Rahmann S, Tauch A., BMC Genomics 7(), 2006
PMID: 16478536
Utilization of soluble starch by a recombinant Corynebacterium glutamicum strain: growth and lysine production.
Seibold G, Auchter M, Berens S, Kalinowski J, Eikmanns BJ., J Biotechnol 124(2), 2006
PMID: 16488498
A genome-based approach to create a minimally mutated Corynebacterium glutamicum strain for efficient L-lysine production.
Ikeda M, Ohnishi J, Hayashi M, Mitsuhashi S., J Ind Microbiol Biotechnol 33(7), 2006
PMID: 16506038
The DtxR regulon of Corynebacterium glutamicum.
Wennerhold J, Bott M., J Bacteriol 188(8), 2006
PMID: 16585752
Engineering of a xylose metabolic pathway in Corynebacterium glutamicum.
Kawaguchi H, Vertès AA, Okino S, Inui M, Yukawa H., Appl Environ Microbiol 72(5), 2006
PMID: 16672486
High-throughput transposon mutagenesis of Corynebacterium glutamicum and construction of a single-gene disruptant mutant library.
Suzuki N, Okai N, Nonaka H, Tsuge Y, Inui M, Yukawa H., Appl Environ Microbiol 72(5), 2006
PMID: 16672528
Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups.
Gao B, Paramanathan R, Gupta RS., Antonie Van Leeuwenhoek 90(1), 2006
PMID: 16670965
Analysis and modeling of mycolyl-transferases in the CMN group.
Ramulu HG, Adindla S, Guruprasad L., Bioinformation 1(5), 2006
PMID: 17597881
Siderophore-mediated iron transport in Bacillus subtilis and Corynebacterium glutamicum.
Dertz EA, Stintzi A, Raymond KN., J Biol Inorg Chem 11(8), 2006
PMID: 16912897
Production system for biodegradable polyester polyhydroxybutyrate by Corynebacterium glutamicum.
Jo SJ, Maeda M, Ooi T, Taguchi S., J Biosci Bioeng 102(3), 2006
PMID: 17046539
Functional analysis of the twin-arginine translocation pathway in Corynebacterium glutamicum ATCC 13869.
Kikuchi Y, Date M, Itaya H, Matsui K, Wu LF., Appl Environ Microbiol 72(11), 2006
PMID: 16997984
Cre/loxP-mediated deletion system for large genome rearrangements in Corynebacterium glutamicum.
Suzuki N, Tsuge Y, Inui M, Yukawa H., Appl Microbiol Biotechnol 67(2), 2005
PMID: 15834716
Methionine production by fermentation.
Kumar D, Gomes J., Biotechnol Adv 23(1), 2005
PMID: 15610965
Prediction of functional class of novel bacterial proteins without the use of sequence similarity by a statistical learning method.
Cui J, Han LY, Cai CZ, Zheng CJ, Ji ZL, Chen YZ., J Mol Microbiol Biotechnol 9(2), 2005
PMID: 16319498
Formation of volutin granules in Corynebacterium glutamicum.
Pallerla SR, Knebel S, Polen T, Klauth P, Hollender J, Wendisch VF, Schoberth SM., FEMS Microbiol Lett 243(1), 2005
PMID: 15668011
Mapping the membrane proteome of Corynebacterium glutamicum.
Schluesener D, Fischer F, Kruip J, Rögner M, Poetsch A., Proteomics 5(5), 2005
PMID: 15717325
Adaptation of Corynebacterium glutamicum to ammonium limitation: a global analysis using transcriptome and proteome techniques.
Silberbach M, Schäfer M, Hüser AT, Kalinowski J, Pühler A, Krämer R, Burkovski A., Appl Environ Microbiol 71(5), 2005
PMID: 15870326
Functional analysis of sigH expression in Corynebacterium glutamicum.
Kim TH, Kim HJ, Park JS, Kim Y, Kim P, Lee HS., Biochem Biophys Res Commun 331(4), 2005
PMID: 15883048
Large-scale engineering of the Corynebacterium glutamicum genome.
Suzuki N, Okayama S, Nonaka H, Tsuge Y, Inui M, Yukawa H., Appl Environ Microbiol 71(6), 2005
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Catabolism of benzoate and phthalate in Rhodococcus sp. strain RHA1: redundancies and convergence.
Patrauchan MA, Florizone C, Dosanjh M, Mohn WW, Davies J, Eltis LD., J Bacteriol 187(12), 2005
PMID: 15937168
Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genome-wide transcriptional profiling.
Hüser AT, Chassagnole C, Lindley ND, Merkamm M, Guyonvarch A, Elisáková V, Pátek M, Kalinowski J, Brune I, Pühler A, Tauch A., Appl Environ Microbiol 71(6), 2005
PMID: 15933028
Vanillate metabolism in Corynebacterium glutamicum.
Merkens H, Beckers G, Wirtz A, Burkovski A., Curr Microbiol 51(1), 2005
PMID: 15971090
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, Meyer F, Rupp O, Schneiker S, Viehoever P, Pühler A., J Bacteriol 187(13), 2005
PMID: 15968079
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction.
Rückert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Pühler A, Kalinowski J., BMC Genomics 6(), 2005
PMID: 16159395
The whcE gene of Corynebacterium glutamicum is important for survival following heat and oxidative stress.
Kim TH, Park JS, Kim HJ, Kim Y, Kim P, Lee HS., Biochem Biophys Res Commun 337(3), 2005
PMID: 16212936
DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum.
Silberbach M, Hüser A, Kalinowski J, Pühler A, Walter B, Krämer R, Burkovski A., J Biotechnol 119(4), 2005
PMID: 15935503
Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon.
Beckers G, Strösser J, Hildebrandt U, Kalinowski J, Farwick M, Krämer R, Burkovski A., Mol Microbiol 58(2), 2005
PMID: 16194241
Characterization of a Corynebacterium glutamicum lactate utilization operon induced during temperature-triggered glutamate production.
Stansen C, Uy D, Delaunay S, Eggeling L, Goergen JL, Wendisch VF., Appl Environ Microbiol 71(10), 2005
PMID: 16204505
Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources.
Koch DJ, Rückert C, Rey DA, Mix A, Pühler A, Kalinowski J., Appl Environ Microbiol 71(10), 2005
PMID: 16204527
Analysis of genes involved in arsenic resistance in Corynebacterium glutamicum ATCC 13032.
Ordóñez E, Letek M, Valbuena N, Gil JA, Mateos LM., Appl Environ Microbiol 71(10), 2005
PMID: 16204540
Biotechnological production of amino acids and derivatives: current status and prospects.
Leuchtenberger W, Huthmacher K, Drauz K., Appl Microbiol Biotechnol 69(1), 2005
PMID: 16195792
Functional analysis of all aminotransferase proteins inferred from the genome sequence of Corynebacterium glutamicum.
Marienhagen J, Kennerknecht N, Sahm H, Eggeling L., J Bacteriol 187(22), 2005
PMID: 16267288
Multiple large segment deletion method for Corynebacterium glutamicum.
Suzuki N, Nonaka H, Tsuge Y, Okayama S, Inui M, Yukawa H., Appl Microbiol Biotechnol 69(2), 2005
PMID: 15843930
Manipulating corynebacteria, from individual genes to chromosomes.
Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 71(12), 2005
PMID: 16332735
New multiple-deletion method for the Corynebacterium glutamicum genome, using a mutant lox sequence.
Suzuki N, Nonaka H, Tsuge Y, Inui M, Yukawa H., Appl Environ Microbiol 71(12), 2005
PMID: 16332837
Glutamate as an inhibitor of phosphoenolpyruvate carboxylase activity in Corynebacterium glutamicum.
Delaunay S, Daran-Lapujade P, Engasser JM, Goergen JL., J Ind Microbiol Biotechnol 31(4), 2004
PMID: 15133716
Evolutionary process of amino acid biosynthesis in Corynebacterium at the whole genome level.
Nishio Y, Nakamura Y, Usuda Y, Sugimoto S, Matsui K, Kawarabayasi Y, Kikuchi H, Gojobori T, Ikeo K., Mol Biol Evol 21(9), 2004
PMID: 15163767
Small change: keeping pace with microevolution.
Feil EJ., Nat Rev Microbiol 2(6), 2004
PMID: 15152204
Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy.
Hansmeier N, Bartels FW, Ros R, Anselmetti D, Tauch A, Pühler A, Kalinowski J., J Biotechnol 112(1-2), 2004
PMID: 15288952
Roles of pyruvate kinase and malic enzyme in Corynebacterium glutamicum for growth on carbon sources requiring gluconeogenesis.
Netzer R, Krause M, Rittmann D, Peters-Wendisch PG, Eggeling L, Wendisch VF, Sahm H., Arch Microbiol 182(5), 2004
PMID: 15375646
Pantothenate synthesis in plants.
Raman SB, Rathinasabapathi B., Plant Sci 167(5), 2004
PMID: IND43645555
The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.
Cerdeño-Tárraga AM, Efstratiou A, Dover LG, Holden MT, Pallen M, Bentley SD, Besra GS, Churcher C, James KD, De Zoysa A, Chillingworth T, Cronin A, Dowd L, Feltwell T, Hamlin N, Holroyd S, Jagels K, Moule S, Quail MA, Rabbinowitsch E, Rutherford KM, Thomson NR, Unwin L, Whitehead S, Barrell BG, Parkhill J., Nucleic Acids Res 31(22), 2003
PMID: 14602910
Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique.
Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Pühler A, Meyer F., J Biotechnol 106(2-3), 2003
PMID: 14651855
EMMA: a platform for consistent storage and efficient analysis of microarray data.
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Pühler A, Meyer F., J Biotechnol 106(2-3), 2003
PMID: 14651856
Bioinformatics support for high-throughput proteomics.
Wilke A, Rückert C, Bartels D, Dondrup M, Goesmann A, Hüser AT, Kespohl S, Linke B, Mahne M, McHardy A, Pühler A, Meyer F., J Biotechnol 106(2-3), 2003
PMID: 14651857
Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source.
Hüser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Pühler A, Wiegräbe I, Tauch A., J Biotechnol 106(2-3), 2003
PMID: 14651867

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