519 Publications

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[519]
2017 | Journal Article | PUB-ID: 2908419
Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T
Torres Tejerizo GA, Wibberg D, Winkler A, Ormeño-Orrillo E, Martínez-Romero E, Niehaus K, Pühler A, Kalinowski J, Lagares A, Schlüter A, Pistorio M (2017)
Genome Announcements 5(4): e01513-16.
PUB | PDF | DOI
 
 
[517]
2017 | Journal Article | PUB-ID: 2913116
The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110
Wolf T, Droste J, Gren T, Ortseifen V, Schneiker-Bekel S, Zemke T, Pühler A, Kalinowski J (2017)
BMC Genomics 18: 62.
PUB | PDF | DOI
 
[516]
2017 | Journal Article | PUB-ID: 2912114
The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)
Verwaaijen B, Wibberg D, Kröber M, Winkler A, Zrenner R, Bednarz H, Niehaus K, Grosch R, Pühler A, Schlüter A (2017)
PLOS ONE 12(5): e0177278.
PUB | PDF | DOI
 
[515]
2017 | Journal Article | PUB-ID: 2911997
A metabolomic approach to characterize the acid-tolerance response in Sinorhizobium meliloti
Omar Draghi W, Florencia Del Papa M, Barsch A, Albicoro FJ, Lozano MJ, Pühler A, Niehaus K, Lagares A (2017)
METABOLOMICS 13(6): 71.
PUB | DOI | WoS
 
[514]
2017 | Journal Article | PUB-ID: 2911777
Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste
Torres Tejerizo GA, Kim YS, Maus I, Wibberg D, Winkler A, Off S, Pühler A, Scherer P, Schlüter A (2017)
JOURNAL OF BIOTECHNOLOGY 247: 1-5.
PUB | DOI | WoS | PubMed | Europe PMC
 
[513]
2017 | Journal Article | PUB-ID: 2911462
Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data
Alkhateeb R, Rückert C, Rupp O, Pucker B, Hublik G, Wibberg D, Niehaus K, Pühler A, Vorhölter F-J (2017)
Journal of Biotechnology.
PUB | DOI
 
[512]
2017 | Journal Article | PUB-ID: 2910369
Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis
Maus I, Kim YS, Wibberg D, Stolze Y, Off S, Antonczyk S, Pühler A, Scherer P, Schlüter A (2017)
JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY 27(2): 321-334.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[511]
2017 | Journal Article | PUB-ID: 2910373
Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales
Bartholomaus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2017)
ARCHIVES OF VIROLOGY 162(2): 555-559.
PUB | DOI | WoS | PubMed | Europe PMC
 
[510]
2016 | Journal Article | PUB-ID: 2908260
Rhizobium favelukesii sp nov., isolated from the root nodules of alfalfa (Medicago sativa L)
Torres Tejerizo GA, Antonio Rogel M, Ormeno-Orrillo E, Julia Althabegoiti M, Fernanda Nilsson J, Niehaus K, Schlüter A, Pühler A, Florencia Del Papa M, Lagares A, Martinez-Romero E, et al. (2016)
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 66: 4451-4457.
PUB | DOI | WoS
 
[509]
2016 | Journal Article | PUB-ID: 2901808 PUB | DOI | WoS | PubMed | Europe PMC
 
[508]
2016 | Journal Article | PUB-ID: 2907676
Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T)
Jaenicke S, Bunk B, Wibberg D, Spröer C, Hersemann L, Blom J, Winkler A, Schatschneider S, Albaum S, Kölliker R, Goesmann A, et al. (2016)
Genome Announcements 4(6): e01334-16.
PUB | PDF | DOI
 
[507]
2016 | Journal Article | PUB-ID: 2907431
Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV
Bartholomaeus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
PLOS ONE 11(11): e0165965.
PUB | DOI | WoS | PubMed | Europe PMC
 
[506]
2016 | Journal Article | PUB-ID: 2904691
Genomics of high molecular weight plasmids isolated from an on-farm biopurification system
Martini MC, Wibberg D, Lozano M, Torres Tejerizo G, Albicoro FJ, Jaenicke S, van Elsas JD, Petroni A, Pilar Garcillan-Barcia M, de la Cruz F, Schlüter A, et al. (2016)
Scientific Reports 6: 28284.
PUB | DOI | WoS | PubMed | Europe PMC
 
[505]
2016 | Journal Article | PUB-ID: 2902126
Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes
Liebe S, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
FEMS Microbiology Ecology 92(2): fiw004.
PUB | DOI | WoS
 
[504]
2016 | Journal Article | PUB-ID: 2905504
Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing
Kröber M, Verwaaijen B, Wibberg D, Winkler A, Pühler A, Schlüter A (2016)
Journal of Biotechnology 231: 212-223.
PUB | DOI | WoS | PubMed | Europe PMC
 
[503]
2016 | Journal Article | PUB-ID: 2905631
Applying DNA affinity chromatography to specifically screen for sucrose-related DNA-binding transcriptional regulators of Xanthomonas campestris
Leßmeier L, Alkhateeb R, Schulte F, Steffens T, Loka TP, Pühler A, Niehaus K, Vorhölter F-J (2016)
Journal of Biotechnology 232: 89-98.
PUB | DOI | WoS | PubMed | Europe PMC
 
[502]
2016 | Journal Article | PUB-ID: 2901243
Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Wolf T, Zemke T, Wehmeier UF, Hecker M, Kalinowski J, et al. (2016)
Journal of Proteomics 131: 140-148.
PUB | DOI | WoS | PubMed | Europe PMC
 
[501]
2016 | Journal Article | PUB-ID: 2901675
Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene.
Krahn T, Wibberg D, Maus I, Winkler A, Bontron S, Sczyrba A, Nordmann P, Pühler A, Poirel L, Schlüter A (2016)
Antimicrobial Agents and Chemotherapy 60(5): 3032-3040.
PUB | DOI | WoS | PubMed | Europe PMC
 
[500]
2016 | Journal Article | PUB-ID: 2905629
Complete genome analysis of Clostridium bornimense strain M2/40(T): A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor
Tomazetto G, Hahnke S, Koeck DE, Wibberg D, Maus I, Pühler A, Klocke M, Schlüter A (2016)
Journal of Biotechnology 232: 38-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[499]
2016 | Journal Article | PUB-ID: 2904993
Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor
Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
Genome Announcements 4(4): e00687-16.
PUB | PDF | DOI
 
[498]
2016 | Journal Article | PUB-ID: 2904978
Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor
Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
Genome Announcements 4(3): e00609-16.
PUB | PDF | DOI
 
[497]
2016 | Journal Article | PUB-ID: 2904970
Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor
Maus I, Wibberg D, Winkler A, Pühler A, Schnürer A, Schlüter A (2016)
Genome Announcements 4(3): e00568-16.
PUB | PDF | DOI
 
[496]
2016 | Journal Article | PUB-ID: 2906715
Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (vol 188, pg 136, 2014)
Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
Journal of Biotechnology 237: 35.
PUB | DOI | WoS | PubMed | Europe PMC
 
[495]
2016 | Journal Article | PUB-ID: 2905630
Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors
Gren T, Ortseifen V, Wibberg D, Schneiker-Bekel S, Bednarz H, Niehaus K, Zemke T, Persicke M, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 232: 79-88.
PUB | DOI | WoS | PubMed | Europe PMC
 
[494]
2016 | Journal Article | PUB-ID: 2905505
Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System
Wolf T, Gren T, Thieme E, Wibberg D, Zemke T, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 231: 122-128.
PUB | DOI | WoS | PubMed | Europe PMC
 
[493]
2016 | Journal Article | PUB-ID: 2903660
The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100
Steffens T, Vorhölter F-J, Giampa M, Hublik G, Pühler A, Niehaus K (2016)
BMC Microbiology 16: 93.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[492]
2016 | Journal Article | PUB-ID: 2905260
Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates
Maus I, Koeck DE, Cibis KG, Hahnke S, Kim YS, Langer T, Kreubel J, Erhard M, Bremges A, Off S, Stolze Y, et al. (2016)
Biotechnology for Biofuels 9(1): 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[491]
2016 | Journal Article | PUB-ID: 2903302
Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing
Wibberg D, Bremges A, Dammann-Kalinowski T, Maus I, Igeño MI, Vogelsang R, König C, Luque-Almagro VM, Roldán MD, Sczyrba A, Moreno-Vivián C, et al. (2016)
Journal of Biotechnology 232: 61-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[490]
2016 | Journal Article | PUB-ID: 2903489
Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment
Maus I, Cibis KG, Bremges A, Stolze Y, Wibberg D, Tomazetto G, Blom J, Sczyrba A, König H, Pühler A, Schlüter A (2016)
Journal of Biotechnology 232: 50-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[489]
2016 | Journal Article | PUB-ID: 2904815
Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants
Stolze Y, Bremges A, Rumming M, Henkel C, Maus I, Pühler A, Sczyrba A, Schlüter A (2016)
Biotechnology for Biofuels 9: 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[488]
2016 | Journal Article | PUB-ID: 2904234
An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant
Ortseifen V, Stolze Y, Maus I, Sczyrba A, Bremges A, Albaum S, Jaenicke S, Fracowiak J, Pühler A, Schlüter A (2016)
Journal of Biotechnology 231: 268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[487]
2016 | Journal Article | PUB-ID: 2900928
Back to the future of soil metagenomics
Nesme J, Achouak W, Agathos S, Bailey M, Baldrian P, Brunel D, Frostegard A, Heulin T, Jansson JK, Jurkevitch E, Kowalchuk GA, et al. (2016)
Frontiers in Microbiology 7: 73.
PUB | DOI | WoS | PubMed | Europe PMC
 
[486]
2016 | Journal Article | PUB-ID: 2905122
A consolidated analysis of the physiologic and molecular responses induced under acid stress in the legume-symbiont model-soil bacterium Sinorhizobium meliloti
Draghi WO, Del Papa MF, Hellweg C, Watt SA, Watt TF, Barsch A, Lozano MJ, Lagares, A. J, Salas ME, Lopez JL, Albicoro FJ, et al. (2016)
SCIENTIFIC REPORTS 6: 29278.
PUB | DOI | WoS | PubMed | Europe PMC
 
[485]
2015 | Journal Article | PUB-ID: 2911748
Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses
Krahn T, Wibberg D, Maus I, Winkler A, Pühler A, Poirel L, Schlüter A (2015)
Genome Announcements 3(4): e00850-15.
PUB | DOI
 
[484]
2015 | Journal Article | PUB-ID: 2764906
Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant
Bremges A, Maus I, Belmann P, Eikmeyer FG, Winkler A, Albersmeier A, Pühler A, Schlüter A, Sczyrba A (2015)
GigaScience 4: 33.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[483]
2015 | Journal Article | PUB-ID: 2782605
The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms
Rupp O, Brinkrolf K, Buerth C, Kunigo M, Schneider J, Jaenicke S, Goesmann A, Pühler A, Jaeger K-E, Ernst JF (2015)
Journal of Biotechnology 211: 20-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[482]
2015 | Journal Article | PUB-ID: 2778477
Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686
Dziewit L, Czarnecki J, Prochwicz E, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
Frontiers in Microbiology 6: 852.
PUB | DOI | WoS | PubMed | Europe PMC
 
[481]
2015 | Journal Article | PUB-ID: 2731076
Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals
Dziewit L, Pyzik A, Szuplewska M, Matlakowska R, Mielnicki S, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
Frontiers in Microbiology 6.
PUB | DOI | WoS | PubMed | Europe PMC
 
[480]
2015 | Journal Article | PUB-ID: 2761035
Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum
Arnold M, Wibberg D, Blom J, Schatschneider S, Winkler A, Kutter Y, Rückert C, Albersmeier A, Albaum S, Goesmann A, Zange S, et al. (2015)
Genome announcements 3(4).
PUB | DOI | PubMed | Europe PMC
 
[479]
2015 | Journal Article | PUB-ID: 2758122
Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951)
Wibberg D, Alkhateeb R, Winkler A, Albersmeier A, Schatschneider S, Albaum S, Niehaus K, Hublik G, Pühler A, Vorhölter F-J (2015)
Journal of Biotechnology 204: 45-46.
PUB | DOI | WoS | PubMed | Europe PMC
 
[478]
2015 | Journal Article | PUB-ID: 2709783
Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid
Ortseifen V, Winkler A, Albersmeier A, Wendler S, Pühler A, Kalinowski J, Rückert C (2015)
Journal of Biotechnology 194: 81-83.
PUB | DOI | WoS | PubMed | Europe PMC
 
[477]
2015 | Journal Article | PUB-ID: 2764307
Comprehensive proteome analysis of Actinoplanes sp SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Walter F, Wolf T, Zemke T, Wehmeier UF, Hecker M, et al. (2015)
Journal of Proteomics 125: 1-16.
PUB | DOI | WoS | PubMed | Europe PMC
 
[476]
2015 | Journal Article | PUB-ID: 2901214
Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor
Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2015)
Journal of Biotechnology 214: 59-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[475]
2015 | Journal Article | PUB-ID: 2758134
Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant
Maus I, Cibis KG, Wibberg D, Winkler A, Stolze Y, König H, Pühler A, Schlüter A (2015)
Journal of Biotechnology 203: 17-18.
PUB | DOI | WoS | PubMed | Europe PMC
 
[474]
2015 | Journal Article | PUB-ID: 2785064
Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1
Krahn T, Wibberg D, Maus I, Winkler A, Nordmann P, Pühler A, Poirel L, Schlüter A (2015)
Genome Announcements 3(5): e01008-15.
PUB | PDF | DOI
 
[473]
2015 | Journal Article | PUB-ID: 2717648
Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor
Hahnke S, Maus I, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2015)
Journal of Biotechnology 193: 34-36.
PUB | DOI | WoS | PubMed | Europe PMC
 
[472]
2015 | Journal Article | PUB-ID: 2901297
Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates
Wibberg D, Rupp O, Blom J, Jelonek L, Kröber M, Verwaaijen B, Goesmann A, Albaum S, Grosch R, Pühler A, Schlüter A (2015)
Plos One 10(12): e0144769.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[471]
2015 | Journal Article | PUB-ID: 2758144
Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system
Wibberg D, Rupp O, Jelonek L, Kröber M, Verwaaijen B, Blom J, Winkler A, Goesmann A, Grosch R, Pühler A, Schlüter A (2015)
Journal of Biotechnology 203: 19-21.
PUB | DOI | WoS | PubMed | Europe PMC
 
[470]
2015 | Journal Article | PUB-ID: 2733509
Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants
Maus I, Wibberg D, Stantscheff R, Stolze Y, Blom J, Eikmeyer FG, Fracowiak J, König H, Pühler A, Schlüter A (2015)
Journal of Biotechnology 201: 43-53.
PUB | DOI | WoS | PubMed | Europe PMC
 
[469]
2015 | Journal Article | PUB-ID: 2768627
Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing
Eikmeyer FG, Heinl S, Marx H, Pühler A, Grabherr R, Schlüter A (2015)
PLoS ONE 10(7): e0134149.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[468]
2015 | Journal Article | PUB-ID: 2722382
Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions
Stolze Y, Zakrzewski M, Maus I, Eikmeyer FG, Jaenicke S, Rottmann N, Siebner C, Pühler A, Schlüter A (2015)
Biotechnology for Biofuels 8: 14.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[467]
2015 | Journal Article | PUB-ID: 2719679
The Sinorhizobium fredii HH103 genome: a comparative analysis with S. fredii strains differing in their symbiotic behaviour with soybean
Vinardell JM, Acosta-Jurado S, Göttfert M, Zehner S, Becker A, Baena-Ropero I, Blom J, Crespo-Rivas JC, Goesmann A, Jaenicke S, Krol E, et al. (2015)
Molecular Plant-Microbe Interactions.
PUB | DOI | WoS | PubMed | Europe PMC
 
[466]
2014 | Journal Article | PUB-ID: 2658490
Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids
Dziewit L, Czarnecki J, Wibberg D, Radlinska M, Mrozek P, Szymczak M, Schlüter A, Pühler A, Bartosik D (2014)
BMC Genomics 15(1): 124.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[465]
2014 | Journal Article | PUB-ID: 2678800
Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing
Kröber M, Wibberg D, Grosch R, Eikmeyer FG, Verwaaijen B, Chowdhury SP, Hartmann A, Pühler A, Schlüter A (2014)
Frontiers in Microbiology 5: 252.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[464]
2014 | Journal Article | PUB-ID: 2694915
Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw
Hahnke S, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2014)
Journal of Biotechnology 184: 199-200.
PUB | DOI | WoS | PubMed | Europe PMC
 
[463]
2014 | Journal Article | PUB-ID: 2675608
Genome sequence of the acid-tolerant strain Rhizobium sp LPU83
Wibberg D, Torres Tejerizo G, Florencia Del Papa M, Martini C, Pühler A, Lagares A, Schlüter A, Pistorio M (2014)
Journal of Biotechnology 176: 40-41.
PUB | DOI | WoS | PubMed | Europe PMC
 
[462]
2014 | Journal Article | PUB-ID: 2685861
Rhizobial plasmid pLPU83a is able to switch between different transfer machineries depending on its genomic background
Torres Tejerizo G, Pistorio M, Althabegoiti MJ, Cervantes L, Wibberg D, Schlüter A, Pühler A, Lagares A, Romero D, Brom S (2014)
FEMS Microbiology Ecology 88(3): 565-578.
PUB | DOI | WoS | PubMed | Europe PMC
 
[461]
2014 | Journal Article | PUB-ID: 2672926
Genome Sequence of the Acute Urethral Catheter Isolate Pseudomonas aeruginosa MH38
Wibberg D, Tielen P, Blom J, Rosin N, Schobert M, Tüpker R, Schatschneider S, Spilker D, Albersmeier A, Goesmann A, Vorhölter F-J, et al. (2014)
Genome announcements 2(2): e00161-14.
PUB | PDF | DOI | PubMed | Europe PMC
 
[460]
2014 | Journal Article | PUB-ID: 2651944
Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection
Tielen P, Wibberg D, Blom J, Rosin N, Meyer A-K, Bunk B, Schobert M, Tüpker R, Schatschneider S, Rückert C, Albersmeier A, et al. (2014)
Genome announcements 2(1).
PUB | DOI | PubMed | Europe PMC
 
[459]
2014 | Journal Article | PUB-ID: 2699819
Metabolic flux pattern of glucose utilization by Xanthomonas campestris pv. campestris: prevalent role of the Entner-Doudoroff pathway and minor fluxes through the pentose phosphate pathway and glycolysis
Schatschneider S, Huber C, Neuweger H, Watt T, Pühler A, Eisenreich W, Wittmann C, Niehaus K, Vorhölter F-J (2014)
Molecular BioSystems 10(10): 2663-2676.
PUB | DOI | WoS | PubMed | Europe PMC
 
[458]
2014 | Journal Article | PUB-ID: 2710431
Carbon source dependent biosynthesis of acarviose metabolites in Actinoplanes sp SE50/110
Wendler S, Ortseifen V, Persicke M, Klein A, Neshat A, Niehaus K, Schneiker-Bekel S, Walter F, Wehmeier UF, Kalinowski J, Pühler A (2014)
Journal of Biotechnology 191: 113-120.
PUB | DOI | WoS | PubMed | Europe PMC
 
[457]
2014 | Journal Article | PUB-ID: 2665038
Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts
Schwientek P, Neshat A, Kalinowski J, Klein A, Rückert C, Schneiker-Bekel S, Wendler S, Stoye J, Pühler A (2014)
Journal of Biotechnology 190: 85-95.
PUB | DOI | WoS | PubMed | Europe PMC
 
[456]
2014 | Journal Article | PUB-ID: 2707731
Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant
Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2014)
Journal of Biotechnology 188: 136-137.
PUB | DOI | WoS | PubMed | Europe PMC
 
[455]
2014 | Journal Article | PUB-ID: 2717539
Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT
Maus I, Stantscheff R, Wibberg D, Stolze Y, Winkler A, Pühler A, König H, Schlüter A (2014)
Journal of Biotechnology 192: 40-41.
PUB | DOI | WoS | PubMed | Europe PMC
 
[454]
2014 | Journal Article | PUB-ID: 2717549 PUB | DOI | WoS | PubMed | Europe PMC
 
[453]
2014 | Journal Article | PUB-ID: 2717558
First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant
Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Liebl W, Schlüter A (2014)
Journal of Biotechnology 192: 154-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[452]
2014 | Journal Article | PUB-ID: 2693310
Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs)
Wibberg D, Jelonek L, Rupp O, Kröber M, Goesmann A, Grosch R, Pühler A, Schlüter A (2014)
Fungal Biology 118(9-10): 800-813.
PUB | DOI | WoS | PubMed | Europe PMC
 
[451]
2014 | Journal Article | PUB-ID: 2685988
Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing
Jakobi T, Brinkrolf K, Tauch A, Noll T, Stoye J, Pühler A, Goesmann A (2014)
Journal of Biotechnology 190: 64-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
[450]
2014 | Journal Article | PUB-ID: 2676049
IncH-type plasmid harboring the blaCTX-M-15, blaDHA-1, and qnrB4 genes recovered from animal isolates
Schlüter A, Nordmann P, Bonnin RA, Millemann Y, Eikmeyer FG, Wibberg D, Pühler A, Poirel L (2014)
Antimicrobial Agents and Chemotherapy 58(7): 3768-3773.
PUB | DOI | WoS | PubMed | Europe PMC
 
[449]
2014 | Journal Article | PUB-ID: 2662055
Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Wibberg D, Luque-Almagro VM, Igeño MI, Bremges A, Roldán MD, Merchán F, Sáez LP, Guijo MI, Manso MI, Macías D, Cabello P, et al. (2014)
Journal of biotechnology 175: 67-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[448]
2014 | Journal Article | PUB-ID: 2676552
Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)
Becker J, Timmermann C, Rupp O, Albaum S, Brinkrolf K, Goesmann A, Pühler A, Tauch A, Noll T (2014)
Journal of biotechnology 178: 23-31.
PUB | DOI | WoS | PubMed | Europe PMC
 
[447]
2014 | Journal Article | PUB-ID: 2656773
Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines
Rupp O, Becker J, Brinkrolf K, Timmermann C, Borth N, Pühler A, Noll T, Goesmann A (2014)
PLoS ONE 9(1): e85568.
PUB | DOI | WoS | PubMed | Europe PMC
 
[446]
2014 | Journal Article | PUB-ID: 2684336
Concept of Law in Biology Synthetic Biology - Towards an Engineering Science
Weitze M-D, Pühler A (2014)
European Review 22: S102-S112.
PUB | DOI | WoS
 
[445]
2014 | Journal Article | PUB-ID: 2710114
The Crystal Structures of Apo and cAMP-Bound GlxR from Corynebacterium glutamicum Reveal Structural and Dynamic Changes upon cAMP Binding in CRP/FNR Family Transcription Factors
Townsend PD, Jungwirth B, Pojer F, Bußmann M, Money VA, Cole ST, Pühler A, Tauch A, Bott M, Cann MJ, Pohl E (2014)
PloS one 9(12): 113265.
PUB | DOI | WoS | PubMed | Europe PMC
 
[444]
2014 | Book Chapter | PUB-ID: 2694187
Functional -Omics for Cell Lines and Processes - The -Omics Technologies on the Example of CHO Cells
Brinkrolf K, Hoffrogge R, Hackl M, Tauch A, Baumann M, Noll T, Goesmann A, Pühler A, Borth N (2014)
In: Animal Cell Biotechnology In Biologics Production. Hauser H, Wagner R (Eds); Berlin, Germany: Walter de Gruyter.
PUB
 
[443]
2014 | Journal Article | PUB-ID: 2701280
The Genomics Revolution and its Impact on Future Biotechnology
Noll T, Pühler A, Weisshaar B, Wendisch VF (2014)
Journal of Biotechnology 190: 1-1.
PUB | DOI | WoS | PubMed | Europe PMC
 
[442]
2014 | Journal Article | PUB-ID: 2664976
Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkämper A, Pühler A, Biener R, Schwartz D, Kalinowski J (2014)
Journal of biotechnology 178: 41-42.
PUB | DOI | WoS | PubMed | Europe PMC
 
[441]
2013 | Journal Article | PUB-ID: 2615581
Chinese hamster genome sequenced from sorted chromosomes
Brinkrolf K, Rupp O, Laux H, Kollin F, Ernst W, Linke B, Kofler R, Romand S, Hesse F, Budach WE, Galosy S, et al. (2013)
Nature Biotechnology 31(8): 694-695.
PUB | DOI | WoS | PubMed | Europe PMC
 
[440]
2013 | Journal Article | PUB-ID: 2631969
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 714.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[439]
2013 | Journal Article | PUB-ID: 2605230
Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation
Hanreich A, Schimpf U, Zakrzewski M, Schlüter A, Benndorf D, Heyer R, Rapp E, Pühler A, Reichl U, Klocke M (2013)
Systematic and Applied Microbiology 36(5): 330-338.
PUB | DOI | WoS | PubMed | Europe PMC
 
[438]
2013 | Journal Article | PUB-ID: 2548286
Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Luque-Almagro VM, Acera F, Igeño MI, Wibberg D, Roldán MD, Sáez LP, Hennig M, Quesada A, Huertas MJ, Blom J, Merchán F, et al. (2013)
Environmental Microbiology 15(1): 253-270.
PUB | DOI | WoS | PubMed | Europe PMC
 
[437]
2013 | Journal Article | PUB-ID: 2635526
Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation
Koeck DE, Wibberg D, Koellmeier T, Blom J, Jaenicke S, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Schlüter A (2013)
Journal of Biotechnology 168(1): 62-63.
PUB | DOI | WoS | PubMed | Europe PMC
 
[436]
2013 | Journal Article | PUB-ID: 2605193
Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms
Eikmeyer FG, Rademacher A, Hanreich A, Hennig M, Jaenicke S, Maus I, Wibberg D, Zakrzewski M, Pühler A, Klocke M, Schlüter A (2013)
Biotechnology for Biofuels 6(1): 49.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[435]
2013 | Journal Article | PUB-ID: 2633427
Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis
Wibberg D, Blom J, Rückert C, Winkler A, Albersmeier A, Pühler A, Schlüter A, Scharf BE (2013)
Journal of Biotechnology 168(4): 731-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[434]
2013 | Journal Article | PUB-ID: 2614906
The cytosolic and extracellular proteomes of Actinoplanes sp. SE50/110 led to the identification of gene products involved in acarbose metabolism
Wendler S, Hürtgen D, Kalinowski J, Klein A, Niehaus K, Schulte F, Schwientek P, Wehlmann H, Wehmeier UF, Pühler A (2013)
Journal of Biotechnology 167(2): 178-189.
PUB | DOI | WoS | PubMed | Europe PMC
 
[433]
2013 | Journal Article | PUB-ID: 2605244
Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100
Schatschneider S, Persicke M, Watt T, Hublik G, Pühler A, Niehaus K, Vorhölter F-J (2013)
Journal of Biotechnology 167(2): 123-134.
PUB | DOI | WoS | PubMed | Europe PMC
 
[432]
2013 | Journal Article | PUB-ID: 2632946
Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil
Köhler KAK, Rückert C, Schatschneider S, Vorhölter F-J, Szczepanowski R, Blank LM, Niehaus K, Goesmann A, Pühler A, Kalinowski J, Schmid A (2013)
Journal of Biotechnology 168(4): 729-730.
PUB | DOI | WoS | PubMed | Europe PMC
 
[431]
2013 | Journal Article | PUB-ID: 2548236
Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media
Schwientek P, Wendler S, Neshat A, Eirich C, Rückert C, Klein A, Wehmeier UF, Kalinowski J, Stoye J, Pühler A (2013)
Journal of Biotechnology 167(2): 166-177.
PUB | DOI | WoS | PubMed | Europe PMC
 
[430]
2013 | Journal Article | PUB-ID: 2565642
Genomes of Stigonematalean Cyanobacteria (Subsection V) and the Evolution of Oxygenic Photosynthesis from Prokaryotes to Plastids
Dagan T, Roettger M, Stucken K, Landan G, Koch R, Major P, Gould SB, Goremykin VV, Rippka R, de Marsac NT, Gugger M, et al. (2013)
Genome Biology And Evolution 5(1): 31-44.
PUB | DOI | WoS | PubMed | Europe PMC
 
[429]
2013 | Journal Article | PUB-ID: 2645247
Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp Mb1 isolated from a production-scale biogas plant
Maus I, Wibberg D, Stantscheff R, Cibis K, Eikmeyer FG, König H, Pühler A, Schlüter A (2013)
Journal of Biotechnology 168(4): 734-736.
PUB | DOI | WoS | PubMed | Europe PMC
 
[428]
2013 | Journal Article | PUB-ID: 2557080
Complete sequence of broad-host-range plasmid pNOR-2000 harbouring the metallo-beta-lactamase gene blaVIM-2 from Pseudomonas aeruginosa
Bonnin RA, Poirel L, Nordmann P, Eikmeyer FG, Wibberg D, Pühler A, Schlüter A (2013)
Journal of Antimicrobial Chemotherapy 68(5): 1060-1065.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[426]
2013 | Journal Article | PUB-ID: 2614207
Metagenome analyses reveal the influence of the inoculant Lactobacillus buchneri CD034 on the microbial community involved in grass silaging
Eikmeyer FG, Köfinger P, Poschenel A, Jünemann S, Zakrzewski M, Heinl S, Mayrhuber E, Grabherr R, Pühler A, Schwab H, Schlüter A (2013)
Journal of Biotechnology 167(3): 334-343.
PUB | DOI | WoS | PubMed | Europe PMC
 
[425]
2013 | Journal Article | PUB-ID: 2549908
Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14
Wibberg D, Jelonek L, Rupp O, Kröber M, Eikmeyer FG, Goesmann A, Hartmann A, Borriss R, Grosch R, Pühler A, Schlüter A (2013)
Journal of Biotechnology 167(2): 142-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[424]
2013 | Journal Article | PUB-ID: 2529202
MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets
Zakrzewski M, Bekel T, Ander C, Pühler A, Rupp O, Stoye J, Schlüter A, Goesmann A (2013)
Journal of Biotechnology 167(2): 156-165.
PUB | DOI | WoS | PubMed | Europe PMC
 
[423]
2013 | Journal Article | PUB-ID: 2631956
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Iftime D, Musiol EM, Blin K, Wohlleben W, Pühler A, Kalinowski J, Weber T (2013)
Journal of Biotechnology 168(4): 739-740.
PUB | DOI | WoS | PubMed | Europe PMC
 
[422]
2013 | Journal Article | PUB-ID: 2555355
A propionate-inducible expression system based on the Corynebacterium glutamicum prpD2 promoter and PrpR activator and its application for the redirection of amino acid biosynthesis pathways
Plassmeier J, Busche T, Molck S, Persicke M, Pühler A, Rückert C, Kalinowski J (2013)
Journal of Biotechnology 163(2): 225-232.
PUB | DOI | WoS | PubMed | Europe PMC
 
[421]
2013 | Book (Editor) | PUB-ID: 2547769
Biotechnologie-Kommunikation. Kontroversen, Analysen, Aktivitäten
Weitze M-D, Pühler A, Heckl WM, Müller-Röber W, Renn O, Weingart P, Wess G (Eds) (2013) acatech DISKUSSION.
Berlin, Heidelberg: Springer Vieweg.
PUB | DOI
 
[420]
2013 | Journal Article | PUB-ID: 2557779
Genome Sequence of Sinorhizobium meliloti Rm41
Weidner S, Baumgarth B, Göttfert M, Jaenicke S, Pühler A, Schneiker-Bekel S, Serrania J, Szczepanowski R, Becker A (2013)
Genome Announcements 1(1): e00013-12.
PUB | DOI | PubMed | Europe PMC
 
[419]
2013 | Journal Article | PUB-ID: 2548270
High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum
Jungwirth B, Sala C, Kohl TA, Uplekar S, Baumbach J, Cole ST, Pühler A, Tauch A (2013)
Microbiology 159(Pt_1): 12-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[418]
2012 | Journal Article | PUB-ID: 2471681
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing
Rademacher A, Zakrzewski M, Schlüter A, Schonberg M, Szczepanowski R, Goesmann A, Pühler A, Klocke M (2012)
FEMS Microbiology Ecology 79(3): 785-799.
PUB | DOI | WoS | PubMed | Europe PMC
 
[417]
2012 | Journal Article | PUB-ID: 2472279
The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution
Eikmeyer FG, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CB, Top EM, Pühler A, Schlüter A (2012)
Plasmid 68(1): 13-24.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[416]
2012 | Journal Article | PUB-ID: 2526298
Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester
Maus I, Wibberg D, Stantscheff R, Eikmeyer FG, Seffner A, Boelter J, Szczepanowski R, Blom J, Jaenicke S, König H, Pühler A, et al. (2012)
Journal of Bacteriology 194(19): 5487-5488.
PUB | DOI | WoS | PubMed | Europe PMC
 
[415]
2012 | Journal Article | PUB-ID: 2486060
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A (2012)
BMC Genomics 13(1): 112.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[414]
2012 | Journal Article | PUB-ID: 2544774
Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10
Schneider J, Andrea H, Blom J, Jaenicke S, Rückert C, Schorsch C, Szczepanowski R, Farwick M, Goesmann A, Pühler A, Schaffer S, et al. (2012)
Eukaryotic Cell 11(12): 1582-1583.
PUB | DOI | WoS | PubMed | Europe PMC
 
[413]
2012 | Journal Article | PUB-ID: 2501364
Utilization and evaluation of CHO-specific sequence databases for mass spectrometry based proteomics
Meleady P, Hoffrogge R, Henry M, Rupp O, Bort JH, Clarke C, Brinkrolf K, Kelly S, Müller B, Doolan P, Hackl M, et al. (2012)
Biotechnology and Bioengineering 109(6): 1386-1394.
PUB | DOI | WoS | PubMed | Europe PMC
 
[412]
2012 | Journal Article | PUB-ID: 2478526
Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines
Hackl M, Jadhav V, Jakobi T, Rupp O, Brinkrolf K, Goesmann A, Pühler A, Noll T, Borth N, Grillari J (2012)
Journal of Biotechnology 158(3): 151-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[411]
2012 | Journal Article | PUB-ID: 2484618
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing
Zakrzewski M, Goesmann A, Jaenicke S, Jünemann S, Eikmeyer FG, Szczepanowski R, Al-Soud WA, Sørensen S, Pühler A, Schlüter A (2012)
Journal of Biotechnology 158(4): 248-258.
PUB | DOI | WoS | PubMed | Europe PMC
 
[410]
2012 | Journal Article | PUB-ID: 2490535
Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage
Heinl S, Wibberg D, Eikmeyer FG, Szczepanowski R, Blom J, Linke B, Goesmann A, Grabherr R, Schwab H, Pühler A, Schlüter A (2012)
Journal of Biotechnology 161(2): 153-166.
PUB | DOI | WoS | PubMed | Europe PMC
 
[409]
2012 | Journal Article | PUB-ID: 2529610
Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198
Schork S, Schlüter A, Blom J, Schneiker-Bekel S, Pühler A, Goesmann A, Frosch M, Schoen C (2012)
Journal of Bacteriology 194(18): 5144-5145.
PUB | DOI | WoS | PubMed | Europe PMC
 
[408]
2012 | Journal Article | PUB-ID: 2537690 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[407]
2012 | Journal Article | PUB-ID: 2526269
Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
Strobel T, Al-Dilaimi A, Blom J, Gessner A, Kalinowski J, Luzhetska M, Pühler A, Szczepanowski R, Bechthold A, Rückert C (2012)
BMC Genomics 13(1): 465.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[406]
2012 | Journal Article | PUB-ID: 2501774
Microbes and industrial biotechnology
Wendisch VF, Pühler A (2012)
Journal of Biotechnology 158(4): 157-158.
PUB | DOI | WoS
 
[405]
2012 | Journal Article | PUB-ID: 2500966
Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes
Hain T, Ghai R, Billion A, Kuenne CT, Steinweg C, Izar B, Mohamed W, Mraheil M, Domann E, Schaffrath S, Kärst U, et al. (2012)
BMC Genomics 13(1): 144.
PUB | DOI | WoS | PubMed | Europe PMC
 
[404]
2012 | Journal Article | PUB-ID: 2553286
Current research and future perspectives of applied biotechnology
Jungbauer A, Scheper T, Pühler A (2012)
Journal of Biotechnology 162(4): 355.
PUB | DOI | WoS | PubMed | Europe PMC
 
[403]
2012 | Journal Article | PUB-ID: 2513297
On the trail of EHEC/EAEC-unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria
Pauling J, Rottger R, Neuner A, Salgado H, Collado-Vides J, Kalaghatgi P, Azevedo V, Tauch A, Pühler A, Baumbach J (2012)
Integrative Biology 4(7): 728-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[402]
2012 | Journal Article | PUB-ID: 2473849
Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103
Weidner S, Becker A, Bonilla I, Jaenicke S, Lloret J, Margaret I, Pühler A, Ruiz-Sainz JE, Schneiker-Bekel S, Szczepanowski R, Vinardell JM, et al. (2012)
Journal of Bacteriology 194(6): 1617-1618.
PUB | DOI | WoS | PubMed | Europe PMC
 
[401]
2012 | Journal Article | PUB-ID: 2501307
Research on industrial biotechnology within the CLIB-Graduate Cluster - Part I
Pietruszka J, Pühler A, Schembecker G (2012)
Journal of Biotechnology 159(3): 121-122.
PUB | DOI | WoS | PubMed | Europe PMC
 
[400]
2011 | Conference Abstract | PUB-ID: 2453768
Next-generation sequencing of the CHO cell transcriptome
Becker J, Timmermann C, Jakobi T, Rupp O, Szczepanowski R, Hackl M, Goesmann A, Tauch A, Borth N, Grillari J, Pühler A, et al. (2011)
BMC Proceedings 5(Suppl. 8): P6.
PUB | DOI
 
[399]
2011 | Journal Article | PUB-ID: 2087955
Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Höner zu Siederdissen C, Bort JAH, Wieser M, Kunert R, et al. (2011)
Journal of Biotechnology 153(1-2): 62-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
[398]
2011 | Book Chapter | PUB-ID: 2447751
Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods
Jaenicke S, Zakrzewski M, Jünemann S, Pühler A, Goesmann A, Schlüter A (2011)
In: Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. de Bruijn FJ (Ed); Wiley-Blackwell: 403-414.
PUB | DOI
 
[397]
2011 | Journal Article | PUB-ID: 2017892
The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome
Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorhölter F-J, Weidner S, Goesmann A, Pühler A, et al. (In Press)
Journal of Biotechnology 155(1): 20-33.
PUB | DOI | WoS | PubMed | Europe PMC
 
[396]
2011 | Journal Article | PUB-ID: 2354731
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Szczepanowski R, Goesmann A, Setubal JC, Schmitt R, et al. (2011)
Journal of Biotechnology 155(1): 50-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[395]
2011 | Journal Article | PUB-ID: 2354746
Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology
Schwientek P, Szczepanowski R, Rückert C, Stoye J, Pühler A (2011)
Journal of Biotechnology 155(1): 68-77.
PUB | DOI | WoS | PubMed | Europe PMC
 
[394]
2011 | Journal Article | PUB-ID: 2317371
High-quality genome sequence of Pichia pastoris CBS7435
Küberl A, Schneider J, Thallinger GG, Anderl I, Wibberg D, Hajek T, Jaenicke S, Brinkrolf K, Goesmann A, Szczepanowski R, Pühler A, et al. (2011)
Journal of Biotechnology 154(4): 312-320.
PUB | DOI | WoS | PubMed | Europe PMC
 
[393]
2011 | Journal Article | PUB-ID: 2404874
Genome-enabled determination of amino acid biosynthesis in Xanthomonas campestris pv. campestris and identification of biosynthetic pathways for alanine, glycine, and isoleucine by 13C-isotopologue profiling
Schatschneider S, Vorhölter F-J, Rückert C, Becker A, Eisenreich W, Pühler A, Niehaus K (2011)
Molecular Genetics and Genomics 286(3-4): 247-259.
PUB | DOI | WoS | PubMed | Europe PMC
 
[392]
2011 | Journal Article | PUB-ID: 2396576
Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing
Becker J, Hackel M, Jakobi T, Rupp O, Schneider J, Szczepanowski R, Bekel T, Borth N, Goesmann A, Grillari J, Kaltschmidt C, et al. (2011)
Journal of Biotechnology 156(3): 227-235.
PUB | DOI | WoS | PubMed | Europe PMC
 
[391]
2011 | Journal Article | PUB-ID: 2003276
Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing
Jaenicke S, Ander C, Bekel T, Bisdorf R, Dröge M, Gartemann K-H, Jünemann S, Kaiser O, Krause L, Tille F, Zakrzewski M, et al. (2011)
PLoS ONE 6(1): e14519.
PUB | DOI | WoS | PubMed | Europe PMC
 
[390]
2011 | Journal Article | PUB-ID: 1968039
The Nodulation of Alfalfa by the Acid-Tolerant Rhizobium sp. Strain LPU83 Does Not Require Sulfated Forms of Lipochitooligosaccharide Nodulation Signals
Torres Tejerizo G, Florencia Del Papa M, Eugenia Soria-Diaz M, Draghi W, Lozano M, de los Angeles Giusti M, Manyani H, Megias M, Gil Serrano A, Pühler A, Niehaus K, et al. (2011)
Journal of Bacteriology 193(1): 30-39.
PUB | DOI | WoS | PubMed | Europe PMC
 
[389]
2011 | Journal Article | PUB-ID: 2404808
Molecular characterization of PrpR, the transcriptional activator of propionate catabolism in Corynebacterium glutamicum
Plassmeier J, Persicke M, Pühler A, Sterthoff C, Rückert C, Kalinowski J (2011)
Journal of Biotechnology 159(1-2): 1-11.
PUB | DOI | WoS | PubMed | Europe PMC
 
[388]
2011 | Journal Article | PUB-ID: 2289494
Size exclusion chromatography-An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites
Persicke M, Plassmeier J, Neuweger H, Rückert C, Pühler A, Kalinowski J (2011)
Journal of Biotechnology 154(2-3): 171-178.
PUB | DOI | WoS | PubMed | Europe PMC
 
[387]
2011 | Journal Article | PUB-ID: 2375954 PUB | DOI | WoS | PubMed | Europe PMC
 
[386]
2011 | Journal Article | PUB-ID: 2317680
Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris
Zhou L, Vorhölter F-J, He Y-Q, Jiang B-L, Tang J-L, Xu Y, Pühler A, He Y-W (2011)
BMC Genomics 12(1): 359.
PUB | DOI | WoS | PubMed | Europe PMC
 
[385]
2011 | Journal Article | PUB-ID: 2375634
The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis
Pothier JF, Vorhölter F-J, Blom J, Goesmann A, Pühler A, Smits TH, Duffy B (2011)
FEMS Microbiology Letters 323(1): 52-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[384]
2011 | Journal Article | PUB-ID: 2401477
Towards sustainable biotechnology
Mattiasson B, Pühler A (2011)
Journal of Biotechnology 152(4): 113.
PUB | DOI | WoS | PubMed | Europe PMC
 
[383]
2011 | Journal Article | PUB-ID: 2326481
Insights into the genome of the xanthan-producing phytopathogen Xanthomonas arboricola pv. pruni 109 by comparative genomic hybridization
Mayer L, Vendruscolo CT, da Silva WP, Vorhölter F-J, Becker A, Pühler A (2011)
Journal of Biotechnology 155(1): 40-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[382]
2010 | Journal Article | PUB-ID: 1785275
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion
Trost E, Götker S, Schneider J, Schneiker-Bekel S, Szczepanowski R, Tilker A, Viehöver P, Arnold W, Bekel T, Blom J, Gartemann K-H, et al. (2010)
BMC Genomics 11(1): 91.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[381]
2010 | Journal Article | PUB-ID: 1929311
BioImaging: Contributions from biology, physics and informatics
Gölzhäuser A, Nattkemper TW, Niehaus K, Pühler A, Sauer M (2010)
Journal of Biotechnology 149(4): 227-228.
PUB | DOI | WoS | PubMed | Europe PMC
 
[380]
2010 | Journal Article | PUB-ID: 1588692
Complete Genome Sequence of Listeria seeligeri, a Nonpathogenic Member of the Genus Listeria
Steinweg C, Kuenne CT, Billion A, Mraheil MA, Domann E, Ghai R, Barbuddhe SB, Kaerst U, Goesmann A, Pühler A, Weisshaar B, et al. (2010)
Journal of Bacteriology 192(5): 1473-1474.
PUB | DOI | WoS | PubMed | Europe PMC
 
[379]
2010 | Journal Article | PUB-ID: 2486400
Advanced Genomics and Transcriptomics of Industrial Microorganisms
Kalinowski J, Rückert C, Szczepanowski R, Pühler A (2010)
Chemie Ingenieur Technik 82(9): 1518-1519.
PUB | DOI
 
[378]
2010 | Journal Article | PUB-ID: 1903875
The role of sigma factor RpoH1 in the pH stress response of Sinorhizobium meliloti
de Lucena DK, Pühler A, Weidner S (2010)
BMC Microbiology 10(1): 256.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[377]
2009 | Journal Article | PUB-ID: 1783187
EDGAR: a software framework for the comparative analysis of prokaryotic genomes
Blom J, Albaum S, Doppmeier D, Pühler A, Vorhölter F-J, Zakrzewski M, Goesmann A (2009)
BMC Bioinformatics 10(1): 154.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[376]
2009 | Journal Article | PUB-ID: 1634447
The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies
Bekel T, Henckel K, Küster H, Meyer F, Mittard-Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, et al. (2009)
Journal of Biotechnology 140(1-2): 3-12.
PUB | DOI | WoS | PubMed | Europe PMC
 
[375]
2009 | Journal Article | PUB-ID: 1635321
EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data
Dondrup M, Albaum S, Griebel T, Henckel K, Jünemann S, Kahlke T, Kleindt CK, Kuester H, Linke B, Mertens D, Mittard-Runte V, et al. (2009)
BMC Bioinformatics 10(1): 50.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[374]
2009 | Journal Article | PUB-ID: 1591546
Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics
Szczepanowski R, Linke B, Krahn I, Gartemann K-H, Guetzkow T, Eichler W, Pühler A, Schlueter A (2009)
MICROBIOLOGY 155(7): 2306-2319.
PUB | DOI | WoS | PubMed | Europe PMC
 
[373]
2009 | Journal Article | PUB-ID: 1635951
Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032
Nentwich SS, Brinkrolf K, Gaigalat L, Hueser AT, Rey DA, Mohrbach T, Marin K, Pühler A, Tauch A, Kalinowski J (2009)
MICROBIOLOGY 155(1): 150-164.
PUB | DOI | WoS | PubMed | Europe PMC
 
[372]
2009 | Journal Article | PUB-ID: 1633812
Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays
Jochmann N, Kurze A-K, Czaja LF, Brinkrolf K, Brune I, Hueser AT, Hansmeier N, Pühler A, Borovok I, Tauch A (2009)
MICROBIOLOGY 155(5): 1459-1477.
PUB | DOI | WoS | PubMed | Europe PMC
 
[371]
2009 | Journal Article | PUB-ID: 1635309 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[370]
2009 | Journal Article | PUB-ID: 1634467
A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data
Becker A, Barnett MJ, Capela D, Dondrup M, Kamp P-B, Krol E, Linke B, Rüberg S, Runte K, Schroeder BK, Weidner S, et al. (2009)
JOURNAL OF BIOTECHNOLOGY 140(1-2): 45-50.
PUB | DOI | WoS | PubMed | Europe PMC
 
[369]
2009 | Journal Article | PUB-ID: 1591844
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing
Kroeber M, Bekel T, Diaz NN, Goesmann A, Jaenicke S, Krause L, Miller D, Runte KJ, Viehoever P, Pühler A, Schlueter A (2009)
JOURNAL OF BIOTECHNOLOGY 142(1): 38-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[368]
2009 | Journal Article | PUB-ID: 1634097
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide
Strittmatter AW, Liesegang H, Rabus R, Decker I, Amann J, Andres S, Henne A, Fricke WF, Martinez-Arias R, Bartels D, Goesmann A, et al. (2009)
ENVIRONMENTAL MICROBIOLOGY 11(5): 1038-1055.
PUB | DOI | WoS | PubMed | Europe PMC
 
[367]
2009 | Journal Article | PUB-ID: 1634443
Functional genome research on bacteria relevant for agriculture, environment and biotechnology
Pühler A, Selbitschka W (2009)
JOURNAL OF BIOTECHNOLOGY 140(1-2): 1-2.
PUB | DOI | WoS | PubMed | Europe PMC
 
[366]
2008 | Journal Article | PUB-ID: 1585987
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology
Schlüter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann K-H, Krahn I, Krause L, Kroemeke H, Kruse O, Mussgnug JH, et al. (2008)
Journal of Biotechnology 136(1-2): 77-90.
PUB | DOI | WoS | PubMed | Europe PMC
 
[365]
2008 | Journal Article | PUB-ID: 1592318
Host genes involved in nodulation preference in common bean (Phaseolus vulgaris)-Rhizobium etli symbiosis revealed - by suppressive subtractive hybridization
Meschini EP, Blanco FA, Zanetti ME, Beker MP, Küster H, Pühler A, Aguilar OM (2008)
MOLECULAR PLANT-MICROBE INTERACTIONS 21(4): 459-468.
PUB | DOI | WoS | PubMed | Europe PMC
 
[364]
2008 | Journal Article | PUB-ID: 1631126 PUB | DOI | WoS | PubMed | Europe PMC
 
[363]
2008 | Journal Article | PUB-ID: 1586009
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor
Krause L, Diaz NN, Edwards RA, Gartemann K-H, Krömeke H, Neuweger H, Pühler A, Runte KJ, Schlüter A, Stoye J, Szczepanowski R, et al. (2008)
JOURNAL OF BIOTECHNOLOGY 136(1-2): 91-101.
PUB | DOI | WoS | PubMed | Europe PMC
 
[362]
2008 | Journal Article | PUB-ID: 1586869
Identification of Xanthomonas campestris pv. campestris galactose utilization genes from transcriptome data
Serrania J, Vorhölter F-J, Niehaus K, Pühler A, Becker A (2008)
Journal of Biotechnology 135(3): 309-317.
PUB | DOI | WoS | PubMed | Europe PMC
 
[361]
2008 | Journal Article | PUB-ID: 1585956
Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11
Stiens M, Becker A, Bekel T, Gödde V, Goesmann A, Niehaus K, Schneiker-Bekel S, Selbitschka W, Weidner S, Schlüter A, Pühler A (2008)
Journal of Biotechnology 136(1-2): 31-37.
PUB | DOI | WoS | PubMed | Europe PMC
 
[360]
2008 | Journal Article | PUB-ID: 1592024
The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis
Vorhölter F-J, Schneiker-Bekel S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Rückert C, Schmid J, Sidhu VK, et al. (2008)
Journal of Biotechnology 134(1-2): 33-45.
PUB | DOI | WoS | PubMed | Europe PMC
 
[359]
2008 | Journal Article | PUB-ID: 1585918
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker-Bekel S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Goetker S, et al. (2008)
Journal of Biotechnology 136(1-2): 11-21.
PUB | DOI | WoS | PubMed | Europe PMC
 
[358]
2008 | Journal Article | PUB-ID: 1585939
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehöver P, Gartemann K-H, Arnold W, Blom J, Brinkrolf K, Brune I, Goetker S, et al. (2008)
Journal of Biotechnology 136(1-2): 22-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[357]
2008 | Journal Article | PUB-ID: 1592345
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity
Gartemann K-H, Abt B, Bekel T, Burger A, Engemann J, Fluegel M, Gaigalat L, Goesmann A, Graefen I, Kalinowski J, Kaup O, et al. (2008)
JOURNAL OF BACTERIOLOGY 190(6): 2138-2149.
PUB | DOI | WoS | PubMed | Europe PMC
 
[356]
2008 | Journal Article | PUB-ID: 1783292
The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae
Gross R, Guzman CA, Sebaihia M, Martins dos Santos VAP, Pieper DH, Koebnik R, Lechner M, Bartels D, Buhrmester J, Choudhuri JV, Ebensen T, et al. (2008)
BMC Genomics 9(1): 449.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[355]
2008 | Journal Article | PUB-ID: 1585560 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[354]
2008 | Journal Article | PUB-ID: 1585969
Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technology
Szczepanowski R, Bekel T, Goesmann A, Krause L, Kroemeke H, Kaiser O, Eichler W, Pühler A, Schlueter A (2008)
JOURNAL OF BIOTECHNOLOGY 136(1-2): 54-64.
PUB | DOI | WoS | PubMed | Europe PMC
 
[353]
2008 | Journal Article | PUB-ID: 1990198
Bacteriophage 2851 is a prototype phage for dissemination of the Shiga toxin variant gene 2c in Escherichia coli O157:H7
Strauch E, Hammerl JA, Konietzny A, Schneiker-Bekel S, Arnold W, Goesmann A, Pühler A, Beutin L (2008)
Infection and Immunity 76(12): 5466-5477.
PUB | DOI | WoS | PubMed | Europe PMC
 
[352]
2008 | Journal Article | PUB-ID: 1585980
Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant
Schlueter A, Krause L, Szczepanowski R, Goesmann A, Pühler A (2008)
Journal of Biotechnology 136(1-2): 65-76.
PUB | DOI | WoS | PubMed | Europe PMC
 
[351]
2008 | Journal Article | PUB-ID: 1588078
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences
Brinkrolf K, Ploeger S, Solle S, Brune I, Nentwich SS, Hueser AT, Kalinowski J, Pühler A, Tauch A (2008)
MICROBIOLOGY 154(4): 1068-1081.
PUB | DOI | WoS | PubMed | Europe PMC
 
[350]
2008 | Journal Article | PUB-ID: 1586719 PUB | DOI | WoS | PubMed | Europe PMC
 
[349]
2008 | Journal Article | PUB-ID: 1592210 PUB | DOI | WoS | PubMed | Europe PMC
 
[348]
2008 | Journal Article | PUB-ID: 1585914
Genome research in the light of ultrafast sequencing technologies
Pühler A, Selbitschka W (2008)
JOURNAL OF BIOTECHNOLOGY 136(1-2): 1-2.
PUB | DOI | WoS | PubMed | Europe PMC
 
[347]
2007 | Book Chapter | PUB-ID: 2914794
Molecular Detection with Magnetic Labels and Magnetoresistive Sensors
Schotter J, Panhorst M, Brzeska M, Kamp P-B, Becker A, Pühler A, Reiss G, Brückl H (2007)
In: Nanoscale Devices - Fundamentals and Applications. Gross R, Sidorenko A, Tagirov L (Eds); NATO Science Series, 233. Dordrecht: Springer Netherlands: 35-46.
PUB | DOI
 
[346]
2007 | Journal Article | PUB-ID: 1631327
Complete genome sequence of the myxobacterium Sorangium cellulosum
Schneiker-Bekel S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer MO, Bartels D, Bekel T, Beyer S, Bode E, Bode HB, et al. (2007)
Nature Biotechnology 25(11): 1281-1289.
PUB | DOI | WoS | PubMed | Europe PMC
 
[345]
2007 | Journal Article | PUB-ID: 1946125
IncP-1-beta plasmid pGNB1 isolated from a bacterial community from a wastewater treatment plant mediates decolorization of triphenylmethane dyes
Schlüter A, Krahn I, Kollin F, Bonemann G, Stiens M, Szczepanowski R, Schneiker-Bekel S, Pühler A (2007)
Appl Environ Microbiol 73(20): 6345-6350.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[344]
2007 | Journal Article | PUB-ID: 1594426
A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411
Hansmeier N, Chao T-C, Daschkey S, Muesken M, Kalinowski J, Pühler A, Tauch A (2007)
PROTEOMICS 7(7): 1076-1096.
PUB | DOI | WoS | PubMed | Europe PMC
 
[343]
2007 | Journal Article | PUB-ID: 1595014 PUB | DOI | WoS | PubMed | Europe PMC
 
[342]
2007 | Journal Article | PUB-ID: 1593371
The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes
Nakunst D, Larisch C, Hueser AT, Tauch A, Pühler A, Kalinowski J (2007)
JOURNAL OF BACTERIOLOGY 189(13): 4696-4707.
PUB | DOI | WoS | PubMed | Europe PMC
 
[341]
2007 | Journal Article | PUB-ID: 1593538 PUB | DOI | WoS | PubMed | Europe PMC
 
[340]
2007 | Journal Article | PUB-ID: 1593746 PUB | DOI | WoS | PubMed | Europe PMC
 
[339]
2007 | Journal Article | PUB-ID: 1894739
Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses
Küster H, Becker A, Firnhaber C, Hohnjec N, Manthey K, Perlick AM, Bekel T, Dondrup M, Henckel K, Goesmann A, Meyer F, et al. (2007)
Phytochemistry 68(1): 19-32.
PUB | DOI | WoS | PubMed | Europe PMC
 
[338]
2007 | Journal Article | PUB-ID: 1595908
Novel macrolide resistance module carried by the IncP-1 beta resistance plasmid pRSB111, isolated from a wastewater treatment plant
Szczepanowski R, Krahn I, Bohn N, Pühler A, Schlueter A (2007)
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 51(2): 673-678.
PUB | DOI | WoS | PubMed | Europe PMC
 
[337]
2007 | Journal Article | PUB-ID: 1783345
GISMO - gene identification using a support vector machine for ORF classification
Krause L, McHardy AC, Nattkemper TW, Pühler A, Stoye J, Meyer F (2007)
Nucleic Acids Research 35(2): 540-549.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[336]
2007 | Journal Article | PUB-ID: 1596137
Identification and characterization of a nodH ortholog from the alfalfa-nodulating Or191-like rhizobia
Del Papa MF, Pistorio M, Draghi WO, Lozano MJ, Giusti MA, Medina C, van Dillewijn P, Martinez-Abarca F, Flores BM, Ruiz-Sainz JE, Megias M, et al. (2007)
Molecular Plant - Microbe Interactions 20(2): 138-145.
PUB | DOI | WoS | PubMed | Europe PMC
 
[335]
2007 | Journal Article | PUB-ID: 1594087
The Ic1R-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum
Brune I, Jochmann N, Brinkrolf K, Hueser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Pühler A, Tauch A (2007)
JOURNAL OF BACTERIOLOGY 189(7): 2720-2733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[334]
2007 | Journal Article | PUB-ID: 1783754
CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data
Neuweger H, Baumbach J, Albaum S, Bekel T, Dondrup M, Hüser AT, Kalinowski J, Oehm S, Pühler A, Rahmann S, Weile J, et al. (2007)
BMC Systems Biology 1(1): 55.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[333]
2007 | Journal Article | PUB-ID: 1783727
The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in Corynebacterium glutamicum
Gaigalat L, Schlüter J-P, Hartmann M, Mormann S, Tauch A, Pühler A, Kalinowski J (2007)
BMC Molecular Biology 8(1): 104.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[332]
2007 | Journal Article | PUB-ID: 1593996
Molecular systems biology
Sewald N, Pühler A (2007)
JOURNAL OF BIOTECHNOLOGY 129(2): 171-172.
PUB | DOI | WoS | PubMed | Europe PMC
 
[331]
2007 | Journal Article | PUB-ID: 1595939
Molecular basics of mycorrhizal symbioses
Pühler A, Strack D (2007)
PHYTOCHEMISTRY 68(1): 6-7.
PUB | DOI | WoS | PubMed | Europe PMC
 
[330]
2007 | Journal Article | PUB-ID: 1631103
In memoriam: Wolf-Dieter Deckwer - Merging process engineering and systems biology
Rinas U, Pühler A (2007)
JOURNAL OF BIOTECHNOLOGY 132(4): 341.
PUB | DOI | WoS | PubMed | Europe PMC
 
[329]
2006 | Journal Article | PUB-ID: 1868701
Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System
Tauch A, Trost E, Bekel T, Goesmann A, Ludewig U, Pühler A (2006)
Biochemica 4: 4-6.
PUB
 
[328]
2006 | Journal Article | PUB-ID: 1598182
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis
Schneiker-Bekel S, dos Santos VAPM, Bartels D, Bekel T, Brecht M, Buhrmester J, Chernikova TN, Denaro R, Ferrer M, Gertler C, Goesmann A, et al. (2006)
Nature Biotechnology 24(8): 997-1004.
PUB | DOI | WoS | PubMed | Europe PMC
 
[327]
2006 | Journal Article | PUB-ID: 1596976
Complete genome of the mutualistic, N-2-fixing grass endophyte Azoarcus sp strain BH72
Krause A, Ramakumar A, Bartels D, Battistoni F, Bekel T, Boch J, Boehm M, Friedrich F, Hurek T, Krause L, Linke B, et al. (2006)
Nature Biotechnology 24(11): 1385-1391.
PUB | DOI | WoS | PubMed | Europe PMC
 
[326]
2006 | Journal Article | PUB-ID: 1598081
Mobilizable IncQ-related plasmid carrying a new quinolone resistance gene, qnrS2, isolated from the bacterial community of a wastewater treatment plant
Bönemann G, Stiens M, Pühler A, Schlüter A (2006)
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 50(9): 3075-3080.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[324]
2006 | Journal Article | PUB-ID: 1599402
Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae
Hansmeier N, Chao TC, Kalinowski J, Pühler A, Tauch A (2006)
PROTEOMICS 6(8): 2465-2476.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[322]
2006 | Journal Article | PUB-ID: 1596821
Long-term field release of bioluminescent Sinorhizobium meliloti strains to assess the influence of a recA mutation on the strains' survival
Selbitschka W, Keller M, Miethling-Graff R, Dresing U, Schwieger F, Krahn I, Homann I, Dammann-Kalinowski T, Pühler A, Tebbe CC (2006)
MICROBIAL ECOLOGY 52(3): 583-595.
PUB | DOI | WoS | PubMed | Europe PMC
 
[321]
2006 | Journal Article | PUB-ID: 1773628 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[320]
2006 | Journal Article | PUB-ID: 1773853 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[319]
2006 | Journal Article | PUB-ID: 1599383
Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experimerit
Stiens M, Schneiker-Bekel S, Keller M, Kuhn S, Pühler A, Schlüter A (2006)
Appl Environ Microbiol 72(5): 3662-3672.
PUB | DOI | WoS | PubMed | Europe PMC
 
[318]
2006 | Journal Article | PUB-ID: 1599618
The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032
Hansmeier N, Albersmeier A, Tauch A, Damberg T, Ros R, Anselmetti D, Pühler A, Kalinowski J (2006)
Microbiology 152(4): 923-935.
PUB | DOI | WoS | PubMed | Europe PMC
 
[317]
2006 | Journal Article | PUB-ID: 1597316
Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes
Hain T, Steinweg C, Kuenne CT, Billion A, Ghai R, Chatterjee SS, Domann E, Kaerst U, Goesmann A, Bekel T, Bartels D, et al. (2006)
Journal of Bacteriology 188(23): 8299-8302.
PUB | DOI | WoS | PubMed | Europe PMC
 
[316]
2006 | Journal Article | PUB-ID: 1631957
Finding novel genes in bacterial communities isolated from the environment
Krause L, Diaz NN, Bartels D, Edwards RA, Pühler A, Rohwer F, Meyer F, Stoye J (2006)
BIOINFORMATICS 22(14): e281-e289.
PUB | DOI | WoS | PubMed | Europe PMC
 
[315]
2006 | Journal Article | PUB-ID: 1946381 PUB | DOI | WoS | PubMed | Europe PMC
 
[314]
2006 | Journal Article | PUB-ID: 1600185
The clc element of Pseudomonas sp strain B13, a genomic island with various catabolic properties
Gaillard M, Vallaeys T, Vorhölter F-J, Minoia M, Werlen C, Sentchilo V, Pühler A, van der Meer JR (2006)
JOURNAL OF BACTERIOLOGY 188(5): 1999-2013.
PUB | DOI | WoS | PubMed | Europe PMC
 
[313]
2006 | Journal Article | PUB-ID: 1598296
Highlights from ECB12 - Bringing genomes to life
Nielsen J, Pühler A (2006)
JOURNAL OF BIOTECHNOLOGY 124(4): 627-628.
PUB | DOI | WoS
 
[312]
2006 | Journal Article | PUB-ID: 1597413
Aspects of prokaryotic genome research
Gottschalk G, Goebel W, Pühler A (2006)
JOURNAL OF BIOTECHNOLOGY 126(1): 1-2.
PUB | DOI | WoS | PubMed | Europe PMC
 
[311]
2006 | Journal Article | PUB-ID: 1598803
BioPerspectives - From basic research to industrial production
Grabley S, Pühler A (2006)
JOURNAL OF BIOTECHNOLOGY 124(1): 1-3.
PUB | DOI | WoS
 
[310]
2005 | Conference Paper | PUB-ID: 1601308
Magnetoresistive sensors and magnetic nanoparticles for biotechnology
Reiss G, Brückl H, Hütten A, Schotter J, Brzeska M, Panhorst M, Sudfeld D, Becker A, Kamp P-B, Pühler A, Wojczykowski K, et al. (2005)
Journal of Materials Research 20(12): 3294-3302.
PUB | DOI | WoS
 
[309]
2005 | Journal Article | PUB-ID: 1864013
Genomics of resistance plasmids isolated from wastewater treatment plants
Tennstedt T, Heuer H, Top EM, Szczepanowski R, Pühler A, Schlüter A (2005)
Plasmid 53(1): 40-41.
PUB
 
 
[307]
2005 | Journal Article | PUB-ID: 1601955
DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum
Silberbach M, Hüser AT, Kalinowski J, Pühler A, Walter B, Kramer R, Burkovski A (2005)
JOURNAL OF BIOTECHNOLOGY 119(4): 357-367.
PUB | DOI | WoS | PubMed | Europe PMC
 
[306]
2005 | Journal Article | PUB-ID: 1603889
Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques
Silberbach M, Schafer M, Hüser AT, Kalinowski J, Pühler A, Kramer R, Burkovski A (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(5): 2391-2402.
PUB | DOI | WoS | PubMed | Europe PMC
 
[305]
2005 | Journal Article | PUB-ID: 1604074 PUB | DOI | WoS | PubMed | Europe PMC
 
[304]
2005 | Journal Article | PUB-ID: 1604683 PUB | DOI | WoS | PubMed | Europe PMC
 
[303]
2005 | Journal Article | PUB-ID: 1603458
Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling
Hüser AT, Chassagnole C, Lindley ND, Merkamm M, Guyonvarch A, Elisakova V, Patek M, Kalinowski J, Brune I, Pühler A, Tauch A (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(6): 3255-3268.
PUB | DOI | WoS | PubMed | Europe PMC
 
[302]
2005 | Journal Article | PUB-ID: 1602010
Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation
Chao T-C, Buhrmester J, Hansmeier N, Pühler A, Weidner S (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(10): 5969-5982.
PUB | DOI | WoS | PubMed | Europe PMC
 
[301]
2005 | Journal Article | PUB-ID: 1602311 PUB | DOI | WoS | PubMed | Europe PMC
 
[300]
2005 | Journal Article | PUB-ID: 1604328 PUB | DOI | WoS | PubMed | Europe PMC
 
[299]
2005 | Journal Article | PUB-ID: 1602933
Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes
Frenzel A, Manthey K, Perlick AM, Meyer F, Pühler A, Küster H, Krajinski F (2005)
Mol Plant-Microbe Interact 18(8): 771-782.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[297]
2005 | Journal Article | PUB-ID: 1601771
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction
Rückert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Pühler A, Kalinowski J (2005)
BMC Genomics 6(1): 121.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
[296]
2005 | Journal Article | PUB-ID: 1603821 PUB | DOI | WoS | PubMed | Europe PMC
 
[295]
2005 | Journal Article | PUB-ID: 1601712
Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, et al. (2005)
JOURNAL OF BACTERIOLOGY 187(21): 7254-7266.
PUB | DOI | WoS | PubMed | Europe PMC
 
[294]
2005 | Journal Article | PUB-ID: 1602137
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate
Koch DJ, Rückert C, Albersmeier A, Hüser AT, Tauch A, Pühler A, Kalinowski J (2005)
Mol Microbiol 58(2): 480-494.
PUB | DOI | WoS | PubMed | Europe PMC
 
[293]
2005 | Journal Article | PUB-ID: 1773302
BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison
Bartels D, Kespohl S, Albaum S, Drüke T, Goesmann A, Herold J, Kaiser O, Pühler A, Pfeiffer F, Raddatz G, Stoye J, et al. (2005)
Bioinformatics 21(7): 853-859.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[292]
2005 | Journal Article | PUB-ID: 1603317
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, et al. (2005)
Journal of Bacteriology 187(13): 4671-4682.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[291]
2005 | Journal Article | PUB-ID: 1603291
Characterization of the Xanthomonas campestris pv. campestris lipopolysaccharide substructures essential for elicitation of an oxidative burst in tobacco cells
Braun SG, Meyer A, Olst O, Pühler A, Niehaus K (2005)
Molecular Plant - Microbe Interactions 18(7): 674-681.
PUB | DOI | WoS | PubMed | Europe PMC
 
[290]
2005 | Journal Article | PUB-ID: 1602017
Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources
Koch DJ, Rückert C, Rey DA, Mix A, Pühler A, Kalinowski J (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(10): 6104-6114.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[289]
2005 | Conference Paper | PUB-ID: 2447862
What can bacterial genome research teach us about iron uptake in Sinorhizobium meliloti?
Pühler A, Becker A, Buhrmester J, Chao T-C, Rüberg S, Weidner S (2005)
In: Biological Nitrogen Fixation, Sustainable Agriculture and the Environment: Proceedings of the 14th International Nitrogen Fixation Congress. Wang Y-P, Lin M, Tian Z-X, Elmerich C, Newton WE (Eds); Current Plant Science and Biotechnology in Agriculture, 41. Springer: 119-122.
PUB
 
[288]
2005 | Journal Article | PUB-ID: 1604877
Production of N-acetyl-phosphinothricin: A substance used for inducing male sterility in transgenic plants
Risse JM, Pühler A, Flaschel E (2005)
ENGINEERING IN LIFE SCIENCES 5(1): 38-45.
PUB | DOI | WoS
 
[287]
2005 | Journal Article | PUB-ID: 1603956 PUB | DOI | WoS | PubMed | Europe PMC
 
[286]
2004 | Journal Article | PUB-ID: 1608095
Comparison of a prototype magnetoresistive biosensor to standard fluorescent DNA detection
Schotter J, Kamp P-B, Becker A, Pühler A, Reiss G, Brückl H (2004)
BIOSENSORS & BIOELECTRONICS 19(10): 1149-1156.
PUB | DOI | WoS | PubMed | Europe PMC
 
[285]
2004 | Journal Article | PUB-ID: 1606644
Detection and manipulation of biomolecules by magnetic carriers
Brzeska M, Panhorst M, Kamp P-B, Schotter J, Reiss G, Pühler A, Becker A, Brückl H (2004)
JOURNAL OF BIOTECHNOLOGY 112(1-2): 25-33.
PUB | DOI | WoS | PubMed | Europe PMC
 
[284]
2004 | Journal Article | PUB-ID: 1605648
The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1 beta group without any accessory genes
Heuer H, Szczepanowski R, Schneiker-Bekel S, Pühler A, Top EM, Schlüter A (2004)
Microbiology 150(11): 3591-3599.
PUB | DOI | WoS | PubMed | Europe PMC
 
[283]
2004 | Journal Article | PUB-ID: 1608336 PUB | DOI | WoS | PubMed | Europe PMC
 
[282]
2004 | Journal Article | PUB-ID: 1606228
Expression profiling in Medicago truncatula identifies more than 750 genes differentially expressed during nodulation, including many potential regulators of the symbiotic program(1[w])
El Yahyaoui F, Küster H, Ben Amor B, Hohnjec N, Pühler A, Becker A, Gouzy J, Vernie T, Gough C, Niebel A, Godiard L, et al. (2004)
PLANT PHYSIOLOGY 136(2): 3159-3176.
PUB | DOI | WoS | PubMed | Europe PMC
 
[281]
2004 | Journal Article | PUB-ID: 1608345
Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions
Becker A, Berges H, Krol E, Bruand C, Rüberg S, Capela D, Lauber E, Meilhoc E, Ampe F, de Bruijn FJ, Fourment J, et al. (2004)
MOLECULAR PLANT-MICROBE INTERACTIONS 17(3): 292-303.
PUB | DOI | WoS | PubMed | Europe PMC
 
[280]
2004 | Journal Article | PUB-ID: 1608839 PUB | DOI | WoS | PubMed | Europe PMC
 
[279]
2004 | Journal Article | PUB-ID: 1605701 PUB | DOI | WoS | PubMed | Europe PMC
 
[278]
2004 | Journal Article | PUB-ID: 1606270
The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum
Hartmann M, Barsch A, Niehaus K, Pühler A, Tauch A, Kalinowski J (2004)
ARCHIVES OF MICROBIOLOGY 182(4): 299-312.
PUB | DOI | WoS | PubMed | Europe PMC
 
[277]
2004 | Journal Article | PUB-ID: 1607832
The Sinorhizobium meliloti fur gene regulates, with dependence on Mn(II), transcription of the sitABCD operon, encoding a metal-type transporter
Chao T-C, Becker A, Buhrmester J, Pühler A, Weidner S (2004)
JOURNAL OF BACTERIOLOGY 186(11): 3609-3620.
PUB | DOI | WoS | PubMed | Europe PMC
 
[276]
2004 | Journal Article | PUB-ID: 1607424
Development of joint application strategies for two microbial gene finders
McHardy AC, Goesmann A, Pühler A, Meyer F (2004)
BIOINFORMATICS 20(10): 1622-1631.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[274]
2004 | Journal Article | PUB-ID: 1608687
Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula
Küster H, Hohnjec N, Krajinski F, El Yahyaoui F, Manthey K, Gouzy J, Dondrup M, Meyer F, Kalinowski J, Brechenmacher L, van Tuinen D, et al. (2004)
JOURNAL OF BIOTECHNOLOGY 108(2): 95-113.
PUB | DOI | WoS | PubMed | Europe PMC
 
[273]
2004 | Journal Article | PUB-ID: 1606475
Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses
Manthey K, Krajinski F, Hohnjec N, Firnhaber C, Pühler A, Perlick AM, Küster H (2004)
Mol Plant-Microbe Interact 17(10): 1063-1077.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[272]
2004 | Journal Article | PUB-ID: 1773148
Single molecule force spectroscopy on ligand-DNA complexes: from molecular binding mechanisms to biosensor applications
Ros R, Eckel R, Bartels FW, Sischka A, Baumgarth B, Wilking SD, Pühler A, Sewald N, Becker A, Anselmetti D (2004)
Journal of Biotechnology 112(1-2): 5-12.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[271]
2004 | Journal Article | PUB-ID: 1773130
Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy
Hansmeier N, Bartels FW, Ros R, Anselmetti D, Tauch A, Pühler A, Kalinowski J (2004)
J Biotechnol 112(1-2): 177-193.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[269]
2004 | Journal Article | PUB-ID: 1608254
What can bacterial genome research teach us about bacteria-plant interactions?
Pühler A, Arlat M, Becker A, Gottfert M, Morrissey JP, O'Gara F (2004)
Current Opinion in Plant Biology 7(2): 137-147.
PUB | DOI | WoS | PubMed | Europe PMC
 
[268]
2004 | Journal Article | PUB-ID: 1773125
Absence of intrinsic electric conductivity in single dsDNA molecules
Kleine H, Wilke R, Pelargus C, Rott K, Pühler A, Reiss G, Ros R, Anselmetti D (2004)
Journal of Biotechnology 112(1-2): 91-95.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[267]
2004 | Journal Article | PUB-ID: 1606843
A Rab-related small GTP binding protein is predominantly expressed in root nodules of Medicago sativa
Schiene K, Donath S, Brecht M, Pühler A, Niehaus K (2004)
Molecular Genetics and Genomics 272(1): 57-66.
PUB | DOI | WoS | PubMed | Europe PMC
 
[266]
2004 | Journal Article | PUB-ID: 1606360
Highlights from the ECB11: building bridges between biosciences and bioengineering
von Stockar U, Pühler A (2004)
JOURNAL OF BIOTECHNOLOGY 113(1-3): 1-2.
PUB | DOI | WoS
 
[265]
2003 | Journal Article | PUB-ID: 1609247
Genome research on bacteria relevant for agriculture, environment and biotechnology
Pühler A, Selbitschka W (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 119-120.
PUB | DOI | WoS
 
[264]
2003 | Journal Article | PUB-ID: 1610260
Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum
Hartmann M, Tauch A, Eggeling L, Bathe B, Mockel B, Pühler A, Kalinowski J (2003)
J Biotechnol 104(1-3): 199-211.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[263]
2003 | Journal Article | PUB-ID: 1609315
Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems
Golyshin PN, Martins Dos Santos VA, Kaiser O, Ferrer M, Sabirova YS, Lünsdorf H, Chernikova TN, Golyshina OV, Yakimov MM, Pühler A, Timmis KN (2003)
Journal of Biotechnology 106(2-3): 215-220.
PUB | DOI | WoS | PubMed | Europe PMC
 
[262]
2003 | Journal Article | PUB-ID: 1610193 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[261]
2003 | Journal Article | PUB-ID: 1611452
Genomics insights into symbiotic nitrogen fixation
Weidner S, Pühler A, Küster H (2003)
CURRENT OPINION IN BIOTECHNOLOGY 14(2): 200-205.
PUB | DOI | WoS | PubMed | Europe PMC
 
[260]
2003 | Journal Article | PUB-ID: 1609339
Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source
Hüser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Pühler A, Wiegräbe I, Tauch A (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 269-286.
PUB | DOI | WoS | PubMed | Europe PMC
 
[259]
2003 | Journal Article | PUB-ID: 1609328
Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression
Rüberg S, Tian ZX, Krol E, Linke B, Meyer F, Wang YP, Pühler A, Weidner S, Becker A (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 255-268.
PUB | DOI | WoS | PubMed | Europe PMC
 
[258]
2003 | Journal Article | PUB-ID: 1610484
Occurrence of integron-associated resistance gene cassettes located on antibiotic resistance plasmids isolated from a wastewater treatment plant
Tennstedt T, Szczepanowski R, Braun S, Pühler A, Schluter A (2003)
FEMS MICROBIOLOGY ECOLOGY 45(3): 239-252.
PUB | DOI | WoS | PubMed | Europe PMC
 
[257]
2003 | Journal Article | PUB-ID: 1609260
EMMA: a platform for consistent storage and efficient analysis of microarray data
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Pühler A, Meyer F (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
[256]
2003 | Journal Article | PUB-ID: 1609286
Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology
Goesmann A, Linke B, Rupp O, Krause L, Bartels D, Dondrup M, McHardy AC, Wilke A, Pühler A, Meyer F (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 157-167.
PUB | DOI | WoS | PubMed | Europe PMC
 
[255]
2003 | Journal Article | PUB-ID: 1609251
Whole genome shotgun sequencing guided-by bioinformatics pipelines - An optimized approach for an established technique
Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Pühler A, Meyer F (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 121-133.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
 
[252]
2003 | Journal Article | PUB-ID: 1609647 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[251]
2003 | Journal Article | PUB-ID: 1610254
Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics
Tauch A, Pühler A, Kalinowski J, Thierbach G (2003)
JOURNAL OF BIOTECHNOLOGY 104(1-3): 27-40.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[250]
2003 | Journal Article | PUB-ID: 1773880
GenDB - an open source genome annotation system for prokaryote genomes
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Pühler A (2003)
Nucleic Acids Research 31(8): 2187-2195.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[249]
2003 | Journal Article | PUB-ID: 1610269 PUB | DOI | WoS | PubMed | Europe PMC
 
[248]
2003 | Journal Article | PUB-ID: 1610274
Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum
McHardy AC, Tauch A, Rückert C, Pühler A, Kalinowski J (2003)
J Biotechnol 104(1-3): 229-240.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[247]
2003 | Journal Article | PUB-ID: 1609272
Bioinformatics support for high-throughput proteomics
Wilke A, Rückert C, Bartels D, Dondrup M, Goesmann A, Hüser AT, Kespohl S, Linke B, Mahne M, McHardy A, Pühler A, et al. (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 147-156.
PUB | DOI | WoS | PubMed | Europe PMC
 
[246]
2003 | Journal Article | PUB-ID: 1895035
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, et al. (2003)
Journal of Biotechnology 104(1-3): 5-25.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[245]
2003 | Journal Article | PUB-ID: 1609306
Comparison of two Xanthomonas campestris pathovar campestris genomes revealed differences in their gene composition
Vorhölter F-J, Thias T, Meyer F, Bekel T, Kaiser O, Pühler A, Niehaus K (2003)
Journal of Biotechnology 106(2-3): 193-202.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[243]
2003 | Journal Article | PUB-ID: 1610221
A new era in Corynebacterium glutamicum biotechnology
Pühler A, Tauch A (2003)
JOURNAL OF BIOTECHNOLOGY 104(1-3): 1-3.
PUB | DOI | WoS
 
[242]
2002 | Conference Paper | PUB-ID: 1613351
A biochip based on magnetoresistive sensors
Schotter J, Kamp P-B, Becker A, Pühler A, Brinkmann D, Schepper W, Brückl H, Reiss G (2002)
IEEE TRANSACTIONS ON MAGNETICS 38(5): 3365-3367.
PUB | DOI | WoS
 
[241]
2002 | Journal Article | PUB-ID: 1614539 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[239]
2002 | Journal Article | PUB-ID: 1614922
Regulation of succinoglycan and galactoglucan biosynthesis in Sinorhizobium meliloti
Becker A, Rüberg S, Baumgarth B, Bertram-Drogatz PA, Quester I, Pühler A (2002)
JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY 4(3): 187-190.
PUB | WoS | PubMed | Europe PMC
 
[238]
2002 | Journal Article | PUB-ID: 1614276
The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere
Tauch A, Schneiker-Bekel S, Selbitschka W, Pühler A, van Overbeek LS, Smalla K, Thomas CM, Bailey MJ, Forney LJ, Weightman A, Ceglowski P, et al. (2002)
MICROBIOLOGY-SGM 148 (Pt 6): 1637-1653.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[237]
2002 | Journal Article | PUB-ID: 1613598
Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1
Tauch A, Kirchner O, Löffler B, Götker S, Pühler A, Kalinowski J (2002)
CURRENT MICROBIOLOGY 45(5): 362-367.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[236]
2002 | Journal Article | PUB-ID: 1613526
The alanine racemase gene alr is an alternative to antibiotic resistance genes in cloning systems for industrial Corynebacterium glutamicum strains
Tauch A, Götker S, Pühler A, Kalinowski J, Thierbach G (2002)
JOURNAL OF BIOTECHNOLOGY 99(1): 79-91.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[235]
2002 | Journal Article | PUB-ID: 1614833
Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library
Tauch A, Homann I, Mormann S, Rüberg S, Billault A, Bathe B, Brand S, Brockmann-Gretza O, Rückert C, Schischka N, Wrenger C, et al. (2002)
JOURNAL OF BIOTECHNOLOGY 95(1): 25-38.
PUB | DOI | WoS | PubMed | Europe PMC
 
[234]
2002 | Journal Article | PUB-ID: 1613851
Highlights from ECB10 - Applied genome research
Pühler A (2002)
JOURNAL OF BIOTECHNOLOGY 98(2-3): 143-144.
PUB | DOI | WoS | PubMed | Europe PMC
 
[233]
2002 | Journal Article | PUB-ID: 1613903
Highlights from ECB10 - Biotechnology and Society
Pühler A (2002)
JOURNAL OF BIOTECHNOLOGY 98(1): 1-2.
PUB | DOI | WoS | PubMed | Europe PMC
 
[232]
2002 | Journal Article | PUB-ID: 1615273
The molecular key for biotechnology
Pühler A (2002)
JOURNAL OF BIOTECHNOLOGY 94(1): 1-2.
PUB | DOI | WoS
 
[231]
2002 | Journal Article | PUB-ID: 1613234
Highlights from ECB10-novel bioactive substances and bioremediation technologies
Pühler A (2002)
JOURNAL OF BIOTECHNOLOGY 99(3): 173-174.
PUB | DOI | WoS
 
[230]
2002 | Journal Article | PUB-ID: 1614297
Highlights from ECB10 - Biochemical engineering and biocatalysis
Pühler A (2002)
JOURNAL OF BIOTECHNOLOGY 96(1): 1-2.
PUB | DOI | WoS
 
[229]
2002 | Journal Article | PUB-ID: 1614878
Characterization of NVf32: a narbonin-like nodulin of high abundance in Vicia faba L
Frosch SC, Becker JD, Schultze M, Schlesier B, Kahmann U, Pühler A, Perlick AM (2002)
PLANT SCIENCE 162(3): 401-411.
PUB | DOI | WoS
 
[228]
2001 | Conference Paper | PUB-ID: 1617046
Genetic uniformity and symbiotic properties of acid-tolerant alfalfa-nodulating rhizobia isolated from dispersed locations throughout Argentina
Wegener C, Schroder S, Kapp D, Pühler A, Lopez ES, Martinez-Abarca F, Toro N, Del Papa MF, Balague LJ, Lagares A, Martinez-Drets G, et al. (2001)
SYMBIOSIS 30(2-3): 141-162.
PUB | WoS
 
[227]
2001 | Journal Article | PUB-ID: 1618037
Genetic characterization of a Sinorhizobium meliloti chromosomal region involved in lipopolysaccharide biosynthesis
Lagares A, Hozbor DF, Niehaus K, Otero AJLP, Lorenzen J, Arnold W, Pühler A (2001)
J Bacteriol 183(4): 1248-1258.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[226]
2001 | Journal Article | PUB-ID: 1616804
Relaxed rrn expression and amino acid requirement of a Corynebacterium glutamicum rel mutant defective in (p)ppGpp metabolism
Tauch A, Wehmeier L, Gotker S, Pühler A, Kalinowski J (2001)
FEMS Microbiol Lett 201(1): 53-58.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[225]
2001 | Journal Article | PUB-ID: 1617736
A Corynebacterium glutamicum mutant with a defined deletion within the rpIK gene is impaired in (p)ppGpp accumulation upon amino acid starvation
Wehmeier L, Brockmann-Gretza O, Pisabarro A, Tauch A, Pühler A, Martin JF, Kalinowski J (2001)
Microbiology 147: 691-700.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[224]
2001 | Journal Article | PUB-ID: 1616981
Proteome analysis of Corynebacterium glutamicum
Hermann T, Pfefferle W, Baumann C, Busker E, Schaffer S, Bott M, Sahm H, Dusch N, Kalinowski J, Pühler A, Bendt AK, et al. (2001)
ELECTROPHORESIS 22(9): 1712-1723.
PUB | DOI | WoS | PubMed | Europe PMC
 
[223]
2001 | Journal Article | PUB-ID: 1615579
The nodulin VfENOD18 is an ATP-binding protein in infected cells of Vicia faba L. nodules
Becker JD, Moreira LM, Kapp D, Frosch SC, Pühler A, Perlick AM (2001)
PLANT MOLECULAR BIOLOGY 47(6): 749-759.
PUB | DOI | WoS | PubMed | Europe PMC
 
[222]
 
[221]
2001 | Journal Article | PUB-ID: 1616440
Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021
Capela D, Barloy-Hubler F, Gouzy J, Bothe G, Ampe F, Batut J, Boistard P, Becker A, Boutry M, Cadieu E, Dreano S, et al. (2001)
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(17): 9877-9882.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[220]
2001 | Journal Article | PUB-ID: 1616678
The composite genome of the legume symbiont Sinorhizobium meliloti
Galibert F, Finan TM, Long SR, Pühler A, Abola P, Ampe F, Barloy-Hubler F, Barnett MJ, Becker A, Boistard P, Bothe G, et al. (2001)
SCIENCE 293(5530): 668-672.
PUB | DOI | WoS | PubMed | Europe PMC
 
[219]
2001 | Journal Article | PUB-ID: 1616469
The complete sequence of the 1,683-kb pSymB megaplasmid from the N-2-fixing endosymbiont Sinorhizobium meliloti
Finan TM, Weidner S, Wong K, Buhrmester J, Chain P, Vorhölter F-J, Hernandez-Lucas I, Becker A, Cowie A, Gouzy J, Golding B, et al. (2001)
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(17): 9889-9894.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[218]
2001 | Journal Article | PUB-ID: 1773893
The genetic organization and evolution of the broad host range mercury resistance plasmid pSB102 isolated from a microbial population residing in the rhizosphere of alfalfa
Schneiker-Bekel S, Keller M, Dröge M, Lanka E, Pühler A, Selbitschka W (2001)
Nucleic Acids Res 29(24): 5169-5181.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
[217]
2001 | Journal Article | PUB-ID: 1615906 PUB | DOI | WoS | PubMed | Europe PMC
 
[216]
 
[215]
2001 | Journal Article | PUB-ID: 1616388 PUB | DOI | WoS
 
[214]
2001 | Journal Article | PUB-ID: 1616190 PUB | DOI | WoS | PubMed | Europe PMC
 
[213]
2001 | Journal Article | PUB-ID: 1616886 PUB | DOI | WoS | PubMed | Europe PMC
 
[212]
2000 | Journal Article | PUB-ID: 1619890 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[211]
2000 | Journal Article | PUB-ID: 1618501 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[210]
 
[209]
 
[208]
2000 | Journal Article | PUB-ID: 1620086 PUB | DOI | WoS | PubMed | Europe PMC
 
[207]
2000 | Journal Article | PUB-ID: 1620627
A small gene family of broad bean codes for late nodulins containing conserved cysteine clusters
Fruhling M, Albus U, Hohnjec N, Geise G, Pühler A, Perlick AM (2000)
PLANT SCIENCE 152(1): 67-77.
PUB | DOI | WoS
 
[206]
2000 | Journal Article | PUB-ID: 1619605
Genomic organization and expression properties of the VfENOD5 gene from broad bean (Vicia faba L.)
Fruhling M, Hohnjec N, Schroder G, Küster H, Pühler A, Perlick AM (2000)
PLANT SCIENCE 155(2): 169-178.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[204]
2000 | Journal Article | PUB-ID: 1618729
The broad bean nodulin VfENOD18 is a member of a novel family of plant proteins with homologies to the bacterial MJ0577 superfamily
Hohnjec N, Küster H, Albus U, Frosch SC, Becker JD, Pühler A, Perlick AM, Fruhling M (2000)
MOLECULAR AND GENERAL GENETICS 264(3): 241-250.
PUB | WoS | PubMed | Europe PMC
 
 
 
[201]
2000 | Journal Article | PUB-ID: 1620350 PUB | WoS
 
[200]
2000 | Journal Article | PUB-ID: 1619780
Field lysimeter investigation with luciferase-gene (luc)-tagged Sinorhizobium meliloti strains to evaluate the ecological significance of soil inoculation and a recA-mutation
Schwieger F, Dammann-Kalinowski T, Dresing U, Selbitschka W, Munch JC, Pühler A, Keller M, Tebbe CC (2000)
SOIL BIOLOGY & BIOCHEMISTRY 32(6): 859-868.
PUB | DOI | WoS
 
[199]
1999 | Journal Article | PUB-ID: 1622453
Horizontal gene transfer among bacteria in terrestrial and aquatic habitats as assessed by microcosm and field studies
Dröge M, Pühler A, Selbitschka W (1999)
BIOLOGY AND FERTILITY OF SOILS 29(3): 221-245.
PUB | DOI | WoS
 
[198]
1999 | Journal Article | PUB-ID: 1621156 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[197]
1999 | Journal Article | PUB-ID: 1623329 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[196]
1999 | Journal Article | PUB-ID: 1622710
Molecular characterization of idiA and adjacent genes in the cyanobacteria Synechococcus sp strains PCC 6301 and PCC 7942
Michel K-P, Krüger F, Pühler A, Pistorius E (1999)
Microbiology 145(6): 1473-1484.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[195]
1999 | Journal Article | PUB-ID: 1623284 PUB | WoS | PubMed | Europe PMC | GenBank
 
[194]
1999 | Journal Article | PUB-ID: 1622240 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[193]
1999 | Journal Article | PUB-ID: 1621449
Pantothenate production in Escherichia coli K12 by enhanced expression of the panE gene encoding ketopantoate reductase
Elischewski F, Pühler A, Kalinowski J (1999)
JOURNAL OF BIOTECHNOLOGY 75(2-3): 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
[192]
1999 | Journal Article | PUB-ID: 1623143
Genomic organization and expression properties of the MtSucS1 gene, which encodes a nodule-enhanced sucrose synthase in the model legume Medicago truncatula
Hohnjec N, Becker JD, Pühler A, Perlick AM, Küster H (1999)
MOLECULAR AND GENERAL GENETICS 261(3): 514-522.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[190]
1999 | Journal Article | PUB-ID: 1621251
Analysis of genes encoding modular nodulins from Vicia hirsuta and Vicia faba
Küster H, Pühler A, Perlick AM (1999)
PLANT SCIENCE 149(1): 1-11.
PUB | DOI | WoS
 
[189]
1999 | Journal Article | PUB-ID: 1623271
Isolation and characterization of alfalfa-nodulating rhizobia present in acidic soils of Central Argentina and Uruguay
Del Papa MF, Balague LJ, Sowinski SC, Wegener C, Segundo E, Abarca FM, Toro N, Niehaus K, Pühler A, Aguilar OM, Martinez-Drets G, et al. (1999)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 65(4): 1420-1427.
PUB | WoS | PubMed | Europe PMC
 
[188]
1999 | Journal Article | PUB-ID: 1623579
Characterisation of symbiotically efficient alfalfa-nodulating rhizobia isolated from acid soils of Argentina and Uruguay
Segundo E, Martinez-Abarca F, van Dillewijn P, Fernandez-Lopez M, Lagares A, Martinez-Drets G, Niehaus K, Pühler A, Toro N (1999)
FEMS MICROBIOLOGY ECOLOGY 28(2): 169-176.
PUB | DOI | WoS
 
[187]
1999 | Journal Article | PUB-ID: 1622573 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[186]
1999 | Journal Article | PUB-ID: 1623474
The Sinorhizobium meliloti insertion sequence (IS) elements ISRm102F34-1/ISRm7 and ISRm220-13-5 belong to a new family of insertion sequence elements
Selbitschka W, Zekri S, Schroder G, Pühler A, Toro N (1999)
FEMS MICROBIOLOGY LETTERS 172(1): 1-7.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[184]
1998 | Journal Article | PUB-ID: 1624721 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[183]
1998 | Journal Article | PUB-ID: 1625135
The role of the Corynebacterium glutamicum rel gene in (p)ppGpp metabolism
Wehmeier L, Schafer A, Burkovski A, Kramer R, Mechold U, Malke H, Pühler A, Kalinowski J (1998)
Microbiology 144(7): 1853-1862.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[182]
1998 | Journal Article | PUB-ID: 1626161
Xanthomonas campestris pv. campestris gum mutants: Effects on xanthan biosynthesis and plant virulence
Katzen F, Ferreiro DU, Oddo CG, Ielmini MV, Becker A, Pühler A, Ielpi L (1998)
J Bacteriol 180(7): 1607-1617.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[181]
1998 | Journal Article | PUB-ID: 1626331
Versatile low-copy-number plasmids for temperature-inducible overexpression of bacterial genes in Escherichia coli
Götting C, Thierbach G, Pühler A, Kalinowski J (1998)
BIOTECHNIQUES 24(3): 362-+.
PUB | WoS | PubMed | Europe PMC
 
[180]
1998 | Journal Article | PUB-ID: 1624829
Xanthan gum biosynthesis and application: a biochemical/genetic perspective
Becker A, Katzen F, Pühler A, Ielpi L (1998)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 50(2): 145-152.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[178]
1998 | Journal Article | PUB-ID: 1626278 PUB | DOI | WoS | PubMed | Europe PMC
 
[177]
1998 | Book Chapter | PUB-ID: 1869567
Production of exopolysaccharides
Becker A, Pühler A (1998)
In: The Rhizobiaceae. Molecular Biology of Model Plant-Associated Bacteria. Spaink HP, Kondorosi A, Hooykaas PJJ (Eds); Dordrecht: Kluwer Academic Publishers: 97-118.
PUB | DOI
 
[176]
1998 | Journal Article | PUB-ID: 1624834
Prevalence of the Rhizobium etli-like allele in genes coding for 16S rRNA among the indigenous rhizobial populations found associated with wild beans from the Southern Andes in Argentina
Aguilar OM, Lopez MV, Riccillo PM, Gonzalez RA, Pagano M, Grasso DH, Pühler A, Favelukes G (1998)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 64(9): 3520-3524.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[175]
1998 | Journal Article | PUB-ID: 1624995 PUB | DOI | WoS
 
[174]
1998 | Journal Article | PUB-ID: 1625704
Isoleucine uptake in Corynebacterium glutamicum ATCC 13032 is directed by the brnQ gene product
Tauch A, Hermann T, Burkovski A, Kramer R, Pühler A, Kalinowski J (1998)
ARCHIVES OF MICROBIOLOGY 169(4): 303-312.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[173]
1998 | Journal Article | PUB-ID: 1624640
Horizontal gene transfer as a biosafety issue: A natural phenomenon of public concern
Droge M, Pühler A, Selbitschka W (1998)
JOURNAL OF BIOTECHNOLOGY 64(1): 75-90.
PUB | DOI | WoS | PubMed | Europe PMC
 
[172]
1998 | Journal Article | PUB-ID: 1624369
The heat-treatment induced reduction of the pat gene encoded herbicide resistance in Nicotiana tabacum is influenced by the transgene sequence
Kohne S, Neumann K, Pühler A, Broer I (1998)
JOURNAL OF PLANT PHYSIOLOGY 153(5-6): 631-642.
PUB | WoS
 
[171]
1998 | Journal Article | PUB-ID: 1623827
Reduced survival of a RecA-deficient Sinorhizobium meliloti strain in sterile and non-sterile soil during heat stress
Dresing U, Hagen M, Selbitschka W, Pühler A, Keller M (1998)
FEMS MICROBIOLOGY ECOLOGY 27(4): 327-338.
PUB | DOI | WoS
 
 
[169]
1997 | Journal Article | PUB-ID: 1637295
The asparagine synthetase gene VfAS1 is strongly expressed in the nitrogen-fixing zone of broad bean (Vicia faba L) root nodules
Küster H, Albus U, Fruhling M, Tchetkova SA, Tikhonovitch IA, Pühler A, Perlick AM (1997)
PLANT SCIENCE 124(1): 89-95.
PUB | DOI | WoS
 
[168]
1997 | Journal Article | PUB-ID: 1626635 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[167]
1997 | Journal Article | PUB-ID: 1637471
A Corynebacterium glutamicum gene conferring multidrug resistance in the heterologous host Escherichia coli
Jäger W, Kalinowski J, Pühler A (1997)
J Bacteriol 179(7): 2449-2451.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[166]
1997 | Journal Article | PUB-ID: 1636938
The regulatory protein MucR binds to a short DNA region located upstream of the mucR coding region in Rhizobium meliloti
Bertram-Drogatz PA, Rüberg S, Becker A, Pühler A (1997)
Mol Gen Genet 254(5): 529-538.
PUB | DOI | WoS | PubMed | Europe PMC
 
[165]
1997 | Journal Article | PUB-ID: 1638004
The 32-kilobase exp gene cluster of Rhizobium meliloti directing the biosynthesis of galactoglucan: Genetic organization and properties of the encoded gene products
Becker A, Rüberg S, Küster H, Roxlau A, Keller M, Ivashina T, Cheng HP, Walker GC, Pühler A (1997)
J Bacteriol 179(4): 1375-1384.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[164]
 
[163]
1997 | Journal Article | PUB-ID: 1626566
Production of nodulation factors by Rhizobium meliloti: fermentation, purification and characterization of glycolipids
Kohring B, Baier R, Niehaus K, Pühler A, Flaschel E (1997)
GLYCOCONJUGATE JOURNAL 14(8): 963-971.
PUB | DOI | WoS | PubMed | Europe PMC
 
[162]
1997 | Journal Article | PUB-ID: 1637917
The temporal and spatial transcription pattern in root nodules of Vicia faba nodulin genes encoding glycine-rich proteins
Schroder G, Fruhling M, Pühler A, Perlick AM (1997)
PLANT MOLECULAR BIOLOGY 33(1): 113-123.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[161]
1997 | Journal Article | PUB-ID: 1628214
The Vicia faba leghemoglobin gene VfLb29 is induced in root nodules and in roots colonized by the arbuscular mycorrhizal fungus Glomus fasciculatum
Fruhling M, Roussel H, GianinazziPearson V, Pühler A, Perlick AM (1997)
MOLECULAR PLANT-MICROBE INTERACTIONS 10(1): 124-131.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[160]
1997 | Journal Article | PUB-ID: 1637371
Evaluation of the resolving power of three different DNA fingerprinting methods to discriminate among isolates of a natural Rhizobium meliloti population
Niemann S, Pühler A, Tichy HV, Simon R, Selbitschka W (1997)
JOURNAL OF APPLIED MICROBIOLOGY 82(4): 477-484.
PUB | DOI | WoS | PubMed | Europe PMC
 
[159]
1997 | Journal Article | PUB-ID: 1626887
Unusual structure of the tonB-exb DNA region of Xanthomonas campestris pv. campestris: tonB, exbB, and exbD1 are essential for ferric iron uptake, but exbD2 is not
Wiggerich HG, Klauke B, Koplan R, Priefer UB, Pühler A (1997)
JOURNAL OF BACTERIOLOGY 179(22): 7103-7110.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[158]
1997 | Journal Article | PUB-ID: 1627371
Stationary-phase mutants of Sinorhizobium meliloti are impaired in stationary-phase survival or in recovery to logarithmic growth
Uhde C, Schmidt R, Jording D, Selbitschka W, Pühler A (1997)
JOURNAL OF BACTERIOLOGY 179(20): 6432-6440.
PUB | DOI | WoS | PubMed | Europe PMC
 
[157]
1997 | Journal Article | PUB-ID: 1636853 PUB | DOI | WoS
 
 
[155]
1996 | Journal Article | PUB-ID: 1638621
A Corynebacterium glutamicum gene encoding a two-domain protein similar to biotin carboxylases and biotin-carboxyl-carrier proteins
Jäger W, Peters-Wendisch P, Kalinowski J, Pühler A (1996)
Arch Microbiol 166(2): 76-82.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[154]
1996 | Journal Article | PUB-ID: 1638884
Promoter analysis of the Xanthomonas campestris pv campestris gum operon directing biosynthesis of the xanthan polysaccharide
Katzen F, Becker A, Zorreguieta A, Pühler A, Ielpi L (1996)
Journal of Bacteriology 178(14): 4313-4318.
PUB | DOI | WoS | PubMed | Europe PMC
 
[153]
1996 | Journal Article | PUB-ID: 1637976
Construction of L-lysine-overproducing strains of Brevibacterium lactofermentum by targeted disruption of the hom and thrB genes
Fernandez-Gonzalez C, Gil JA, Mateos LM, Schwarzer A, Schafer A, Kalinowski J, Pühler A, Martin JF (1996)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 46(5-6): 554-558.
PUB | DOI | WoS | PubMed | Europe PMC
 
[152]
1996 | Journal Article | PUB-ID: 1638415
Integration of narrow-host-range vectors from Escherichia coli into the genomes of amino acid-producing corynebacteria after intergeneric conjugation
Mateos LM, Schäfer A, Kalinowski J, Martin JF, Pühler A (1996)
JOURNAL OF BACTERIOLOGY 178(19): 5768-5775.
PUB | DOI | WoS | PubMed | Europe PMC
 
[151]
1996 | Journal Article | PUB-ID: 1638387
A physical and genetic map of the Corynebacterium glutamicum ATCC 13032 chromosome
Bathe B, Kalinowski J, Pühler A (1996)
MOLECULAR & GENERAL GENETICS 252(3): 255-265.
PUB | WoS | PubMed | Europe PMC
 
[150]
1996 | Book | PUB-ID: 1863025
Grüne Gentechnik im Widerstreit. Modell einer partizipativen Technikfolgenabschätzung zum Einsatz transgener herbizidresistenter Pflanzen
van den Daele W, Pühler A, Sukopp H, Bora A, Döbert R, Neubert S, Siewert V (1996)
Weinheim: VCH.
PUB
 
[149]
1996 | Journal Article | PUB-ID: 1639789 PUB | WoS | PubMed | Europe PMC | GenBank
 
[148]
1996 | Journal Article | PUB-ID: 1639079
Characterization of two bioluminescent Rhizobium meliloti strains constructed for field releases
Dammann-Kalinowski T, Niemann S, Keller M, Selbitschka W, Tebbe CC, Pühler A (1996)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 45(4): 509-512.
PUB | WoS | PubMed | Europe PMC
 
[147]
1996 | Journal Article | PUB-ID: 1628425
The Vicia faba lipoxygenase gene VfLOX1 is expressed in the root nodule parenchyma
Perlick AM, Albus U, Stavridis T, Fruhling M, Küster H, Pühler A (1996)
MOLECULAR PLANT-MICROBE INTERACTIONS 9(9): 860-863.
PUB | DOI | WoS | PubMed | Europe PMC
 
[146]
1996 | Journal Article | PUB-ID: 1638183
The modular nodulins Nvf-28/32 of broad bean (Vicia faba L): Alternative exon combinations account for different modular structures
Küster H, Fruhling M, Pühler A, Perlick AM (1996)
MOLECULAR & GENERAL GENETICS 252(6): 648-657.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[145]
1996 | Journal Article | PUB-ID: 1639029 PUB | DOI | WoS | PubMed | Europe PMC
 
[144]
1996 | Journal Article | PUB-ID: 1629067
The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins
Perlick AM, Fruhling M, Schroder G, Frosch SC, Pühler A (1996)
PLANT PHYSIOLOGY 110(1): 147-154.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[143]
1996 | Journal Article | PUB-ID: 1638545
Comparative analysis of the genetic structure of a Rhizobium meliloti field population before and after environmental release of the highly competitive R-meliloti strain GR4
Villadas PJ, Burgos P, Jording D, Selbitschka W, Pühler A, Toro N (1996)
FEMS MICROBIOLOGY ECOLOGY 21(1): 37-45.
PUB | DOI | WoS
 
 
[141]
1995 | Journal Article | PUB-ID: 1639972 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[139]
1995 | Journal Article | PUB-ID: 1640119 PUB | DOI | WoS | PubMed | Europe PMC
 
 
[137]
1995 | Journal Article | PUB-ID: 1641658 PUB | WoS | PubMed | Europe PMC
 
[136]
1995 | Journal Article | PUB-ID: 1640027
THE INSERTION-SEQUENCE ELEMENT ISRM2011-2 BELONGS TO THE IS630-TC1 FAMILY OF TRANSPOSABLE ELEMENTS AND IS ABUNDANT IN RHIZOBIUM-MELILOTI
Selbitschka W, Arnold W, Jording D, KOSIER B, TORO N, Pühler A (1995)
GENE 163(1): 59-64.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[135]
1995 | Journal Article | PUB-ID: 1629166 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[134]
1995 | Journal Article | PUB-ID: 1640460
THE NODULE-SPECIFIC VFENOD-GRP3 GENE ENCODING A GLYCINE-RICH EARLY NODULIN IS LOCATED ON CHROMOSOME-I OF VICIA-FABA L AND IS PREDOMINANTLY EXPRESSED IN THE INTERZONE II-III OF ROOT-NODULES
Küster H, SCHRODER G, FRUHLING M, PICH U, RIEPING M, SCHUBERT I, PERLICK AM, Pühler A (1995)
PLANT MOLECULAR BIOLOGY 28(3): 405-421.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[133]
1995 | Journal Article | PUB-ID: 1641112
MOLECULAR ANALYSIS OF THE RHIZOBIUM-MELILOTI MUCR GENE REGULATING THE BIOSYNTHESIS OF THE EXOPOLYSACCHARIDES SUCCINOGLYCAN AND GALACTOGLUCAN
KELLER M, ROXLAU A, WENG WM, SCHMIDT M, QUANDT J, Niehaus K, Jording D, Arnold W, Pühler A (1995)
MOLECULAR PLANT-MICROBE INTERACTIONS 8(2): 267-277.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[132]
1995 | Journal Article | PUB-ID: 1640480
A RHIZOBIUM-MELILOTI FERREDOXIN (FDXN) PURIFIED FROM ESCHERICHIA-COLI DONATES ELECTRONS TO RHODOBACTER-CAPSULATUS NITROGENASE
RIEDEL KU, JOUANNEAU Y, MASEPOHL B, Pühler A, KLIPP W (1995)
EUROPEAN JOURNAL OF BIOCHEMISTRY 231(3): 742-746.
PUB | DOI | WoS | PubMed | Europe PMC
 
[131]
1995 | Journal Article | PUB-ID: 1640841
CONSTRUCTION AND CHARACTERIZATION OF A RHIZOBIUM-LEGUMINOSARUM BIOVAR VICIAE STRAIN DESIGNED TO ASSESS HORIZONTAL GENE-TRANSFER IN THE ENVIRONMENT
Selbitschka W, Jording D, NIEMAN S, SCHMIDT R, Pühler A, MENDUM T, HIRSCH P (1995)
FEMS MICROBIOLOGY LETTERS 128(3): 255-263.
PUB | DOI | WoS | PubMed | Europe PMC
 
[130]
1995 | Journal Article | PUB-ID: 1641543
IDENTIFICATION OF THE AGROBACTERIUM-TUMEFACIENS C58 T-DNA GENE-E AND GENE-F AND THEIR IMPACT ON CROWN GALL TUMOR-FORMATION
BROER I, DROGELASER W, BARKER RF, NEUMANN K, KLIPP W, Pühler A (1995)
PLANT MOLECULAR BIOLOGY 27(1): 41-57.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[129]
1995 | Journal Article | PUB-ID: 1641351
A BIOLOGICAL CONTAINMENT SYSTEM FOR RHIZOBIUM-MELILOTI BASED ON THE USE OF RECOMBINATION-DEFICIENT (RECA(-)) STRAINS
Selbitschka W, DRESING U, HAGEN M, NIEMANN S, Pühler A (1995)
FEMS MICROBIOLOGY ECOLOGY 16(3): 223-232.
PUB | DOI | WoS
 
[128]
1994 | Journal Article | PUB-ID: 1644155
THE ROLE OF RHIZOBIUM-MELILOTI SURFACE POLYSACCHARIDES IN THE INFECTION OF MEDICAGO-SATIVA NODULES
Arnold W, BECKER A, KELLER M, ROXLAU A, Pühler A (1994)
ENDOCYTOBIOSIS AND CELL RESEARCH 10(1-2): 17-28.
PUB | WoS
 
[127]
1994 | Journal Article | PUB-ID: 1643046 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[125]
1994 | Journal Article | PUB-ID: 1642272
Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli
Tauch A, Kirchner O, Wehmeier L, Kalinowski J, Pühler A (1994)
FEMS MICROBIOLOGY LETTERS 123(3): 343-347.
PUB | DOI | WoS | PubMed | Europe PMC
 
[124]
1994 | Journal Article | PUB-ID: 1644393
Increased fertility of Corynebacterium glutamicum recipients in intergeneric matings with Escherichia coli after stress exposure
Schäfer A, Kalinowski J, Pühler A (1994)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 60(2): 756-759.
PUB | WoS | PubMed | Europe PMC
 
[123]
1994 | Conference Paper | PUB-ID: 2450503 PUB
 
[122]
1994 | Journal Article | PUB-ID: 1629475 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[121]
1994 | Journal Article | PUB-ID: 1643885 PUB | DOI | WoS | PubMed | Europe PMC
 
[120]
 
[119]
1994 | Journal Article | PUB-ID: 1629472 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[118]
1994 | Journal Article | PUB-ID: 1642309 PUB | DOI | WoS
 
[117]
1993 | Journal Article | PUB-ID: 1645781 PUB | WoS | PubMed | Europe PMC | GenBank
 
[116]
1993 | Journal Article | PUB-ID: 1644297 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[115]
1993 | Journal Article | PUB-ID: 1645024 PUB | WoS | PubMed | Europe PMC | GenBank
 
[114]
1993 | Journal Article | PUB-ID: 1645883
GENETIC-ANALYSIS OF THE RHIZOBIUM-MELILOTI EXOYFQ OPERON - EXOY IS HOMOLOGOUS TO SUGAR TRANSFERASES AND EXOQ REPRESENTS A TRANSMEMBRANE PROTEIN
MULLER P, KELLER M, WENG WM, QUANDT J, Arnold W, Pühler A (1993)
MOLECULAR PLANT-MICROBE INTERACTIONS 6(1): 55-65.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[113]
1993 | Journal Article | PUB-ID: 1645233
THE SUCROSE SYNTHASE GENE IS PREDOMINANTLY EXPRESSED IN THE ROOT-NODULE TISSUE OF VICIA-FABA
Küster H, Fruhling M, Perlick AM, Pühler A (1993)
MOLECULAR PLANT-MICROBE INTERACTIONS 6(4): 507-514.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[112]
1993 | Journal Article | PUB-ID: 1645792 PUB | WoS
 
[111]
1993 | Journal Article | PUB-ID: 1644905
SATURATION MUTAGENESIS IN ESCHERICHIA-COLI OF A CLONED XANTHOMONAS-CAMPESTRIS DNA FRAGMENT WITH THE LUX TRANSPOSON TN4431 USING THE DELIVERY PLASMID PDS1, THERMOSENSITIVE IN REPLICATION
STEINMANN D, WIGGERICH HG, KLAUKE B, SCHRAMM U, Pühler A, PRIEFER UB (1993)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 40(2-3): 356-360.
PUB | WoS | PubMed | Europe PMC
 
[110]
1993 | Journal Article | PUB-ID: 1645218
A SURVEY OF TRANSCRIPTS EXPRESSED SPECIFICALLY IN ROOT-NODULES OF BROADBEAN (VICIA-FABA L)
PERLICK AM, Pühler A (1993)
PLANT MOLECULAR BIOLOGY 22(6): 957-970.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[108]
1993 | Journal Article | PUB-ID: 1644806 PUB | WoS | PubMed | Europe PMC | GenBank
 
[107]
1993 | Journal Article | PUB-ID: 1644293
TRANSGENIC ROOT-NODULES OF VICIA-HIRSUTA - A FAST AND EFFICIENT SYSTEM FOR THE STUDY OF GENE-EXPRESSION IN INDETERMINATE-TYPE NODULES
QUANDT HJ, Pühler A, BROER I (1993)
MOLECULAR PLANT-MICROBE INTERACTIONS 6(6): 699-706.
PUB | DOI | WoS
 
[106]
1993 | Journal Article | PUB-ID: 1646505
RHIZOBIUM-MELILOTI MUTANTS DEFECTIVE IN SYMBIOTIC NITROGEN-FIXATION AFFECT THE OXYGEN GRADIENT IN ALFALFA (MEDICAGO-SATIVA) ROOT-NODULES
MASEPOHL B, WITTY JF, RIEDEL KU, KLIPP W, Pühler A (1993)
JOURNAL OF EXPERIMENTAL BOTANY 44(2): 419-426.
PUB | DOI | WoS
 
[105]
1993 | Journal Article | PUB-ID: 1646943
REGULATORY ASPECTS OF THE C4-DICARBOXYLATE TRANSPORT IN RHIZOBIUM-MELILOTI - TRANSCRIPTIONAL ACTIVATION AND DEPENDENCE ON EFFECTIVE SYMBIOSIS
Jording D, SHARMA PK, SCHMIDT R, ENGELKE T, UHDE C, Pühler A (1993)
JOURNAL OF PLANT PHYSIOLOGY 141(1): 18-27.
PUB | WoS
 
[104]
1993 | Journal Article | PUB-ID: 1646401 PUB | DOI | WoS
 
[103]
1993 | Journal Article | PUB-ID: 1646539
CONSTRUCTION OF GENE REPLACEMENT VECTORS FOR GRAM- BACTERIA USING A GENETICALLY MODIFIED SACRB GENE AS A POSITIVE SELECTION MARKER
Selbitschka W, NIEMANN S, Pühler A (1993)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 38(5): 615-618.
PUB | WoS
 
[102]
1992 | Conference Paper | PUB-ID: 1647768
Developmental and metabolic regulation of nitrogen-fixation gene expression in Rhizobium meliloti
de Philip P, BOISTARD P, Schlüter A, Patschkowski T, PRIEFER UB, OGARA F, BOESTEN B, NOONAN B, Pühler A (1992)
CANADIAN JOURNAL OF MICROBIOLOGY 38(6): 467-474.
PUB | DOI | WoS
 
[101]
1992 | Journal Article | PUB-ID: 1648018
THE SURFACE POLYSACCHARIDES OF RHIZOBIUM-MELILOTI AND THEIR ROLE IN FORMING N-2-FIXING ALFALFA NODULES
Arnold W, KELLER M, BECKER A, ROXLAU A, Niehaus K, QUANDT J, WENG WM, Pühler A (1992)
ENDOCYTOBIOSIS AND CELL RESEARCH 8(2-3): 209-212.
PUB | WoS
 
[100]
1992 | Journal Article | PUB-ID: 1629761
GENETICS OF XANTHAN PRODUCTION IN XANTHOMONAS-CAMPESTRIS - THE XANA AND XANB GENES ARE INVOLVED IN UDP-GLUCOSE AND GDP-MANNOSE BIOSYNTHESIS
KOPLIN R, Arnold W, HOTTE B, SIMON R, WANG G, Pühler A (1992)
JOURNAL OF BACTERIOLOGY 174(1): 191-199.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[99]
1992 | Journal Article | PUB-ID: 1647778
Synthesis of the ferredoxin-like protein FdxN from Rhizobium meliloti bacteroids as a fusion protein in Escherichia coli
RIEDEL KU, MASEPOHL B, KLIPP W, Pühler A (1992)
Canadian Journal of Microbiology 38(6): 534-540.
PUB | DOI | WoS | PubMed | Europe PMC
 
[98]
1992 | Journal Article | PUB-ID: 1647665 PUB | WoS | PubMed | Europe PMC
 
[97]
1992 | Journal Article | PUB-ID: 1647506
A Rhizobium meliloti lipopolysaccharide mutant altered in competitiveness for nodulation of alfalfa
Lagares A, Caetano-Anollés G, Niehaus K, Lorenzen J, Ljunggren HD, Pühler A, Favelukes G (1992)
Journal of Bacteriology 174(18): 5941-5952.
PUB | DOI | WoS | PubMed | Europe PMC
 
[96]
1992 | Journal Article | PUB-ID: 1648334 PUB | WoS | PubMed | Europe PMC | GenBank
 
[95]
1992 | Journal Article | PUB-ID: 1646490
AN OSMOREVERTANT OF A RHIZOBIUM-MELILOTI NDVB DELETION MUTANT FORMS INFECTION THREADS BUT IS DEFECTIVE IN BACTEROID DEVELOPMENT
QUANDT J, HILLEMANN A, Niehaus K, Arnold W, Pühler A (1992)
MOLECULAR PLANT-MICROBE INTERACTIONS 5(5): 420-427.
PUB | DOI | WoS
 
[94]
1992 | Journal Article | PUB-ID: 1648216
FUNCTIONAL-ANALYSIS OF THE CYSTEINE MOTIFS IN THE FERREDOXIN-LIKE PROTEIN FDXN OF RHIZOBIUM-MELILOTI INVOLVED IN SYMBIOTIC NITROGEN-FIXATION
MASEPOHL B, KUTSCHE M, RIEDEL KU, SCHMEHL M, KLIPP W, Pühler A (1992)
MOLECULAR & GENERAL GENETICS 233(1-2): 33-41.
PUB | DOI | WoS | PubMed | Europe PMC
 
[93]
1992 | Journal Article | PUB-ID: 1647461 PUB | DOI | WoS | PubMed | Europe PMC
 
[92]
1992 | Journal Article | PUB-ID: 1647021
THE RHIZOBIUM-MELILOTI PMI GENE ENCODES A NEW TYPE OF PHOSPHOMANNOSE ISOMERASE
SCHMIDT M, Arnold W, NIEMANN A, KLEICKMANN A, Pühler A (1992)
GENE 122(1): 35-43.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[91]
1992 | Journal Article | PUB-ID: 1647147 PUB | DOI | WoS | PubMed | Europe PMC
 
 
[89]
1992 | Journal Article | PUB-ID: 1629585 PUB | DOI | WoS
 
[88]
1992 | Journal Article | PUB-ID: 1629777 PUB | DOI | WoS
 
[87]
1991 | Journal Article | PUB-ID: 1649702
A functionally split pathway for lysine synthesis in Corynebacterium glutamicium
Schrumpf B, Schwarzer A, Kalinowski J, Pühler A, Eggeling L, Sahm H (1991)
Journal of Bacteriology 173(14): 4510-4516.
PUB | WoS | PubMed | Europe PMC
 
[86]
1991 | Journal Article | PUB-ID: 1648921
Characterization of pGA1, a new plasmid from Corynebacterium glutamicum LP-6
Sonnen H, Thierbach G, Kautz S, Kalinowski J, Schneider J, Pühler A, Kutzner HJ (1991)
Gene 107(1): 69-74.
PUB | DOI | WoS | PubMed | Europe PMC
 
[85]
1991 | Journal Article | PUB-ID: 1648831
Molecular analysis of the Corynebacterium glutamicum lysl gene involved in lysine uptake
Seep-Feldhaus AH, Kalinowski J, Pühler A (1991)
MOLECULAR MICROBIOLOGY 5(12): 2995-3005.
PUB | DOI | WoS | PubMed | Europe PMC
 
[84]
1991 | Journal Article | PUB-ID: 1649978
Genetic and biochemical analysis of the aspartokinase from Corynebacterium glutamicum
Kalinowski J, Cremer J, Bachmann B, Eggeling L, Sahm H, Pühler A (1991)
MOLECULAR MICROBIOLOGY 5(5): 1197-1204.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[83]
1991 | Journal Article | PUB-ID: 1773962
Gene disruption and gene replacement in Streptomyces via single stranded DNA transformation of integration vectors
Hillemann D, Pühler A, Wohlleben W (1991)
Nucleic Acids Research 19(4): 727-731.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[82]
1991 | Journal Article | PUB-ID: 1649411
CHARACTERIZATION OF RECA GENES AND RECA MUTANTS OF RHIZOBIUM-MELILOTI AND RHIZOBIUM-LEGUMINOSARUM BIOVAR VICIAE
Selbitschka W, Arnold W, PRIEFER UB, ROTTSCHAFER T, SCHMIDT M, SIMON R, Pühler A (1991)
MOLECULAR & GENERAL GENETICS 229(1): 86-95.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[81]
1991 | Journal Article | PUB-ID: 1650416
Increased yield of a lysozyme after self-cloning of the gene in Streptomyces coelicolor "Müller"
Bräu B, Hilgenfeld R, Schlingmann M, Marquardt R, Birr E, Wohlleben W, Aufderheide K, Pühler A (1991)
Applied Microbiology and Biotechnology 34(4): 481-487.
PUB | WoS | PubMed | Europe PMC
 
[80]
1991 | Journal Article | PUB-ID: 1649848 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[79]
1991 | Journal Article | PUB-ID: 1650198
GENETIC-ANALYSIS OF THE PHOSPHINOTHRICIN-TRIPEPTIDE BIOSYNTHETIC-PATHWAY OF STREPTOMYCES-VIRIDOCHROMOGENES TU494
ALIJAH R, DORENDORF J, TALAY S, Pühler A, WOHLLEBEN W (1991)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 34(6): 749-755.
PUB | WoS | PubMed | Europe PMC
 
[78]
1991 | Journal Article | PUB-ID: 1629878
MANIPULATION OF CORYNEBACTERIUM-GLUTAMICUM BY GENE DISRUPTION AND REPLACEMENT
SCHWARZER A, Pühler A (1991)
BIO-TECHNOLOGY 9(1): 84-87.
PUB | DOI | WoS | PubMed | Europe PMC
 
[77]
1991 | Journal Article | PUB-ID: 1649667
MADE BY GENETIC-ENGINEERING
DIDERICHSEN B, CROOY P, Pühler A (1991)
BIOTECH FORUM EUROPE 8(5): 246-247.
PUB | WoS
 
[76]
1990 | Journal Article | PUB-ID: 1652001
Cloning of a DNA fragment from Corynebacterium glutamicum conferring aminoethyl cysteine resistance and feedback resistance to aspartokinase.
Thierbach G, Kalinowski J, Bachmann B, Pühler A (1990)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 32(4): 443-448.
PUB | DOI | WoS | PubMed | Europe PMC
 
[75]
1990 | Journal Article | PUB-ID: 1651883
High-frequency conjugal plasmid transfer from gram-negative Escherichia coli to various gram-positive coryneform bacteria.
Schäfer A, Kalinowski J, Simon R, Seep-Feldhaus AH, Pühler A (1990)
JOURNAL OF BACTERIOLOGY 172(3): 1663-1666.
PUB | DOI | WoS | PubMed | Europe PMC
 
[74]
1990 | Journal Article | PUB-ID: 1651903 PUB | WoS | PubMed | Europe PMC
 
[73]
1990 | Journal Article | PUB-ID: 1629917 PUB | WoS | PubMed | Europe PMC | GenBank
 
[72]
1990 | Journal Article | PUB-ID: 1668756
An Fnr-like protein encoded in Rhizobium leguminosarum biovar viciae shows structural and functional homology to Rhizobium meliloti FixK.
Colonna-Romano S, Arnold W, Schlüter A, Boistard P, Pühler A, Priefer UB (1990)
Mol Gen Genet 223(1): 138-147.
PUB | DOI | WoS | PubMed | Europe PMC
 
[71]
1990 | Journal Article | PUB-ID: 1650905 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[70]
1990 | Journal Article | PUB-ID: 1651624
CLONING AND ANALYSIS OF A 35.3-KILOBASE DNA REGION INVOLVED IN EXOPOLYSACCHARIDE PRODUCTION BY XANTHOMONAS-CAMPESTRIS PV CAMPESTRIS
HOTTE B, RATHARNOLD I, Pühler A, SIMON R (1990)
JOURNAL OF BACTERIOLOGY 172(5): 2804-2807.
PUB | WoS | PubMed | Europe PMC
 
[69]
1990 | Journal Article | PUB-ID: 1651306 PUB | DOI | WoS | PubMed | Europe PMC
 
[68]
1990 | Journal Article | PUB-ID: 1651130
CONJUGAL TRANSFER OF MEGAPLASMID-2 BETWEEN RHIZOBIUM-MELILOTI STRAINS IN ALFALFA NODULES
PRETORIUSGUTH IM, Pühler A, SIMON R (1990)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 56(8): 2354-2359.
PUB | WoS
 
[67]
1989 | Journal Article | PUB-ID: 1774543
Electrotransformation of intact and osmotically sensitive cells of Corynebacterium glutamicum
Wolf H, Pühler A, Neumann E (1989)
Applied Microbiology and Biotechnology 30(3): 283-289.
PUB | PDF | DOI | WoS
 
[66]
1989 | Journal Article | PUB-ID: 1653087
The Rhizobium meliloti fdxN gene encoding a ferredoxin-like protein is necessary for nitrogen fixation and is cotranscribed with nifA and nifB
Klipp W, Reilander H, Schlüter A, Krey R, Pühler A (1989)
MOLECULAR & GENERAL GENETICS 216(2-3): 293-302.
PUB | DOI | WoS | PubMed | Europe PMC
 
[65]
1989 | Journal Article | PUB-ID: 1652943 PUB | DOI | WoS | PubMed | Europe PMC
 
[64]
1989 | Journal Article | PUB-ID: 1653076
OPEN READING FRAME-5 (ORF5), ENCODING A FERREDOXIN-LIKE PROTEIN, AND NIFQ ARE COTRANSCRIBED WITH NIFE, NIFN, NIFX, AND ORF4 IN RHODOBACTER-CAPSULATUS
MORENO-VIVIAN C, HENNECKE S, Pühler A, KLIPP W (1989)
JOURNAL OF BACTERIOLOGY 171(5): 2591-2598.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[63]
1989 | Journal Article | PUB-ID: 1652424
IDENTIFICATION AND SEQUENCE-ANALYSIS OF THE RHIZOBIUM-MELILOTI DCTA GENE ENCODING THE C-4-DICARBOXYLATE CARRIER
Engelke T, Jording D, Kapp D, Pühler A (1989)
JOURNAL OF BACTERIOLOGY 171(10): 5551-5560.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[62]
1989 | Journal Article | PUB-ID: 1652907 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[61]
1989 | Journal Article | PUB-ID: 1652271
A VECTOR SYSTEM WITH TEMPERATURE-SENSITIVE REPLICATION FOR GENE DISRUPTION AND MUTATIONAL CLONING IN STREPTOMYCETES
MUTH G, NUSSBAUMER B, WOHLLEBEN W, Pühler A (1989)
MOLECULAR & GENERAL GENETICS 219(3): 341-348.
PUB | DOI | WoS
 
 
[59]
1988 | Journal Article | PUB-ID: 1653582 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[58]
1988 | Journal Article | PUB-ID: 1653687
NUCLEOTIDE-SEQUENCE OF A 24,206-BASE-PAIR DNA FRAGMENT CARRYING THE ENTIRE NITROGEN-FIXATION GENE-CLUSTER OF KLEBSIELLA-PNEUMONIAE
Arnold W, RUMP A, KLIPP W, PRIEFER UB, Pühler A (1988)
JOURNAL OF MOLECULAR BIOLOGY 203(3): 715-738.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[57]
1988 | Journal Article | PUB-ID: 1653575 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[56]
1988 | Journal Article | PUB-ID: 1654396
GENETIC-CHARACTERIZATION AND SEQUENCE-ANALYSIS OF THE DUPLICATED NIFA-NIFB GENE REGION OF RHODOBACTER-CAPSULATUS
Masepohl B, Klipp W, Pühler A (1988)
MOLECULAR & GENERAL GENETICS 212(1): 27-37.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[55]
1988 | Journal Article | PUB-ID: 1653915
LIGHT MICROSCOPIC ANALYSIS OF ENTIRE ALFALFA (MEDICAGO-SATIVA) NODULES BY A FAST STAINING AND CLEARING METHOD
Niehaus K, Pühler A (1988)
ENDOCYTOBIOSIS AND CELL RESEARCH 5(1): 59-67.
PUB | WoS
 
[54]
1988 | Journal Article | PUB-ID: 1654642
2 CLASSES OF RHIZOBIUM-MELILOTI INFECTION MUTANTS DIFFER IN EXOPOLYSACCHARIDE PRODUCTION AND IN COINOCULATION PROPERTIES WITH NODULATION MUTANTS
MULLER P, HYNES M, KAPP D, Niehaus K, Pühler A (1988)
MOLECULAR & GENERAL GENETICS 211(1): 17-26.
PUB | DOI | WoS
 
[53]
1988 | Journal Article | PUB-ID: 1654606
IDENTIFICATION AND MAPPING OF NITROGEN-FIXATION GENES OF RHODOBACTER-CAPSULATUS - DUPLICATION OF A NIFA-NIFB REGION
KLIPP W, MASEPOHL B, Pühler A (1988)
JOURNAL OF BACTERIOLOGY 170(2): 693-699.
PUB | DOI | WoS | PubMed | Europe PMC
 
[52]
1988 | Journal Article | PUB-ID: 1654509
THE MINIMAL REPLICON OF THE STREPTOMYCES-GHANAENSIS PLASMID PSG5 IDENTIFIED BY SUBCLONING AND TN5 MUTAGENESIS
MUTH G, WOHLLEBEN W, Pühler A (1988)
MOLECULAR & GENERAL GENETICS 211(3): 424-429.
PUB | DOI | WoS | PubMed | Europe PMC
 
[51]
1988 | Journal Article | PUB-ID: 1653778
TRANSFORMATION OF SPHEROPLASTS AND PROTOPLASTS OF CORYNEBACTERIUM-GLUTAMICUM
THIERBACH G, SCHWARZER A, Pühler A (1988)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 29(4): 356-362.
PUB | DOI | WoS
 
[50]
1987 | Journal Article | PUB-ID: 1773940
Organization and partial sequence of a DNA region of the Rhizobium leguminosarum symbiotic plasmid pRL6JI containing the genes fixABC, nifA, nifB and a novel open reading frame
Grönger P, Manian SS, Reiländer H, O´Connell M, Priefer UB, Pühler A (1987)
Nucleic Acids Research 15(1): 31-49.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[49]
1987 | Journal Article | PUB-ID: 1773947
Tight linkage of ginA and a putative regulatory gene in Rhizobium leguminosarum
Colonna-Romano S, Riccio A, Guida M, Defez R, Lamberti A, Iaccarino M, Arnold W, Priefer UB, Pühler A (1987)
Nucleic Acids Research 15(5): 1951-1964.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[48]
1987 | Journal Article | PUB-ID: 1654760 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[47]
1987 | Journal Article | PUB-ID: 2375969
Tight linkage of glnA and a putative regulatory gene in Rhizobium leguminosarum
Colonna-Romano S, Riccio A, Guida M, Defez R, Lamberti A, Iaccarino M, Arnold W, Priefer U, Pühler A (1987)
Nucleic Acids Research 15(5): 1951-1964.
PUB | DOI | WoS | PubMed | Europe PMC
 
[46]
1987 | Journal Article | PUB-ID: 1654754
INCOMPATIBILITY BETWEEN A RHIZOBIUM SYM PLASMID AND A RI PLASMID OF AGROBACTERIUM
OCONNELL MP, HYNES MF, Pühler A (1987)
PLASMID 18(2): 156-163.
PUB | DOI | WoS | PubMed | Europe PMC
 
[45]
1987 | Journal Article | PUB-ID: 1655793
PHYSICAL CHARACTERIZATION OF RHIZOBIUM-MELILOTI MEGAPLASMIDS
BURKARDT B, SCHILLIK D, Pühler A (1987)
PLASMID 17(1): 13-25.
PUB | DOI | WoS | PubMed | Europe PMC
 
[44]
1987 | Journal Article | PUB-ID: 1654975
THE STREPTOMYCES-GHANAENSIS LOW COPY PLASMID PSG2 AND ITS USE FOR VECTOR CONSTRUCTION
WOHLLEBEN W, Pühler A (1987)
ARCHIVES OF MICROBIOLOGY 148(4): 298-304.
PUB | DOI | WoS | PubMed | Europe PMC
 
[43]
1987 | Journal Article | PUB-ID: 1654320
DEVELOPMENT OF A PLASMID-CLONING SYSTEM FOR STREPTOMYCES-VIRIDOCHROMOGENES TU494
STRAUCH E, WOHLLEBEN W, Pühler A (1987)
JOURNAL OF BASIC MICROBIOLOGY 27(8): 449-455.
PUB | DOI | WoS | PubMed | Europe PMC
 
[42]
1987 | Journal Article | PUB-ID: 1630023
NODULE SPECIFIC POLYPEPTIDES OF BROADBEAN (VICIA-FABA L)
MOHAPATRA SS, PERLICK A, Pühler A (1987)
SYMBIOSIS 3(3): 219-232.
PUB | WoS
 
[41]
1987 | Journal Article | PUB-ID: 1654923
GENES OF LITHOAUTOTROPHIC METABOLISM ARE CLUSTERED ON THE MEGAPLASMID PHG1 IN ALCALIGENES-EUTROPHUS
KORTLUKE C, HOGREFE C, EBERZ G, Pühler A, FRIEDRICH B (1987)
MOLECULAR & GENERAL GENETICS 210(1): 122-128.
PUB | DOI | WoS
 
[40]
1987 | Journal Article | PUB-ID: 1655408 PUB | DOI | WoS
 
[39]
1987 | Journal Article | PUB-ID: 1654815
BIOCHEMICAL AND GENETIC-ANALYSIS OF RHIZOBIUM-MELILOTI MUTANTS DEFECTIVE IN C-4-DICARBOXYLATE TRANSPORT
ENGELKE T, JAGADISH MN, Pühler A (1987)
JOURNAL OF GENERAL MICROBIOLOGY 133: 3019-3029.
PUB | WoS
 
[38]
1986 | Journal Article | PUB-ID: 1657060
Plasmid vectors for the genetic analysis and manipulation of rhizobia and other gram-negative bacteria
Simon R, O'Connell M, Labes M, Pühler A (1986)
METHODS IN ENZYMOLOGY 118: 640-659.
PUB | WoS | PubMed | Europe PMC
 
[37]
1986 | Journal Article | PUB-ID: 1656975
Molecular cloning into Tn5 and integration in the Pseudomonas aeruginosa chromosome: a tool for heterologous gene expression
Krishnapillai V, Pühler A, Lanka E (1986)
JOURNAL OF GENERAL MICROBIOLOGY 132: 707-715.
PUB | WoS | PubMed | Europe PMC
 
[36]
1986 | Journal Article | PUB-ID: 1656862
THE 2 MEGAPLASMIDS OF RHIZOBIUM-MELILOTI ARE INVOLVED IN THE EFFECTIVE NODULATION OF ALFALFA
HYNES MF, SIMON R, MULLER P, Niehaus K, LABES M, Pühler A (1986)
MOLECULAR & GENERAL GENETICS 202(3): 356-362.
PUB | DOI | WoS
 
[35]
1986 | Journal Article | PUB-ID: 1655914
DETECTION OF NODULE-SPECIFIC POLYPEPTIDES FROM EFFECTIVE AND INEFFECTIVE ROOT-NODULES OF MEDICAGO-SATIVA L
MOHAPATRA SS, Pühler A (1986)
JOURNAL OF PLANT PHYSIOLOGY 126(2-3): 269-281.
PUB | DOI | WoS
 
[34]
1985 | Journal Article | PUB-ID: 1657989 PUB | DOI | WoS | PubMed | Europe PMC
 
[33]
1985 | Journal Article | PUB-ID: 1657761 PUB | WoS | PubMed | Europe PMC
 
[32]
1985 | Journal Article | PUB-ID: 1657467
Characterization of a Rhizobium meliloti fixation gene (fixF) located near the common nodulation region
Aguilar OM, Kapp D, Pühler A (1985)
Journal of Bacteriology 164(1): 245-254.
PUB | WoS | PubMed | Europe PMC
 
[31]
1985 | Journal Article | PUB-ID: 1657375
MAPPING AND EXPRESSION OF A REGULATORY NITROGEN-FIXATION GENE (FIXD) OF RHIZOBIUM-MELILOTI
WEBER G, REILANDER H, Pühler A (1985)
EMBO JOURNAL 4(11): 2751-2756.
PUB | WoS | PubMed | Europe PMC
 
[30]
1984 | Journal Article | PUB-ID: 1658523
Morphological and molecular characterization of several actinophages isolated from soil which lyse Streptomyces cattleya or S. venezuelae
Anné J, Wohlleben W, Burkardt HJ, Springer R, Pühler A (1984)
Journal of General Microbiology 130(OCT): 2639-2649.
PUB | WoS | PubMed | Europe PMC
 
[29]
1983 | Journal Article | PUB-ID: 1659603
Analysis of IS21-mediated mobilization of plasmid pACYC184 by R68.45 in Escherichia coli
Riess G, Masepohl B, Pühler A (1983)
Plasmid 10(2): 111-118.
PUB | DOI | WoS | PubMed | Europe PMC
 
[28]
1983 | Journal Article | PUB-ID: 1659456 PUB | DOI | WoS
 
[27]
1981 | Journal Article | PUB-ID: 1773924 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[26]
1981 | Journal Article | PUB-ID: 2092521
The tetracycline resistance transposons Tn1721 and Tn1771 have three 38-base-pair repeats and generate five-base-pair direct repeats
Schöffl F, Arnold W, Pühler A, Altenbuchner J, Schmitt R (1981)
Mol Gen Genet 181(1): 87-94.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[25]
1981 | Journal Article | PUB-ID: 2092504
Basis of transposition and gene amplification by Tn1721 and related tetracycline-resistance transposons
Schmitt R, Altenbuchner J, Wiebauer K, Arnold W, Pühler A, Schöffl F (1981)
Cold Spring Harb Symp Quant Biol 45 Pt 1.
PUB | PubMed | Europe PMC | GenBank
 
[24]
1981 | Journal Article | PUB-ID: 1661655
ISR1 - AN INSERTION ELEMENT ISOLATED FROM THE SOIL BACTERIUM RHIZOBIUM-LUPINI
Priefer UB, Burkardt HJ, Klipp W, Pühler A (1981)
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 45 Pt 1: 87-91.
PUB | WoS | PubMed | Europe PMC
 
[23]
1980 | Journal Article | PUB-ID: 2092531 PUB | WoS | PubMed | Europe PMC
 
[22]
1980 | Journal Article | PUB-ID: 2092527
Adenine + thymine content of different genes located on the broad host range plasmid RP4
Burkardt HJ, Pühler A, Wohlleben W (1980)
J Gen Microbiol 117(1).
PUB | WoS | PubMed | Europe PMC
 
[21]
1980 | Journal Article | PUB-ID: 2092533 PUB | DOI | WoS | PubMed | Europe PMC
 
[20]
1980 | Journal Article | PUB-ID: 1662080
R68.45, a plasmid with chromosome mobilizing ability (Cma) carries a tandem duplication
Riess G, Holloway BW, Pühler A (1980)
Genetical Research 36(1): 99-&.
PUB | WoS | PubMed | Europe PMC
 
[19]
1980 | Journal Article | PUB-ID: 1662006
Transposon mutagenesis of the gene encoding the bacteriophage P1 restriction endonuclease. Co-linearity of the gene and gene product
Heilmann H, Burkardt HJ, Pühler A, Reeve JN (1980)
Journal of Molecular Biology 144(3): 387-396.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
1979 | Journal Article | PUB-ID: 2092544
Relationship of group P1 plasmids revealed by heteroduplex experiments: RP1, RP4, R68 and RK2 are identical
Burkardt HJ, Riess G, Pühler A (1979)
J Gen Microbiol 114(2): 341-348.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
1979 | Journal Article | PUB-ID: 2092540 PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
1979 | Journal Article | PUB-ID: 2092551
Spontaneous degradation of pRD1 DNA into unique size classes is recA dependent
Pühler A, Burkardt HJ, Cannon FC, Wohlleben W (1979)
Mol Gen Genet 171(1): 1-6.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
1979 | Journal Article | PUB-ID: 2092548 PUB | DOI | WoS | PubMed | Europe PMC
 
 
[13]
1978 | Journal Article | PUB-ID: 2092559
Electron microscopy and computerized evaluation of some partially denatured group P resistance plasmids
Burkardt HJ, Mattes R, Pühler A, Heumann W (1978)
J Gen Microbiol 105(1): 51-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[12]
1978 | Journal Article | PUB-ID: 2092556
Fertility inhibition in Rhizobium lupini by the resistance plasmid RP4
Pühler A, Burkardt HJ (1978)
Mol Gen Genet 162(2): 163-171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[11]
1976 | Journal Article | PUB-ID: 2092564
Characterization of a nosocomially significant, multiple drug-resistant strain of Serratia marcescens
Traub WH, Kleber I, Pühler A, Burkardt HJ (1976)
Chemotherapy 22(5): 297-312.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
1975 | Journal Article | PUB-ID: 2092569
Physical map of circular mitochondrial DNA from Neurospora crassa
Bernard U, Pühler A, Kuntzel H (1975)
FEBS Lett 60(1): 119-121.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
1975 | Journal Article | PUB-ID: 2092573
Denaturation map of the circular mitochondrial genome of Neurospora crassa
Bernard U, Pühler A, Mayer F, Kuntzel H (1975)
Biochim Biophys Acta 402(2): 270-278.
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
1975 | Journal Article | PUB-ID: 2092593 PUB | WoS | PubMed | Europe PMC
 
[7]
1974 | Journal Article | PUB-ID: 2092583
[Sequential mutagenesis in Rhizobium lupini]
Jessberger B, Pühler A, Heumann W (1974)
Zentralbl Bakteriol Orig A 228(1).
PUB | WoS | PubMed | Europe PMC
 
[6]
1974 | Journal Article | PUB-ID: 2092578
[Genetic studies of class P resistance factors in Rhizobium lupini]
Pühler A, Burkardt HJ, Mattes RE, Heumann W (1974)
Zentralbl Bakteriol Orig A 228(1).
PUB | WoS | PubMed | Europe PMC
 
[5]
1974 | Journal Article | PUB-ID: 2092587
[Regulation of chromosomal transfer in Rhizobium lupini]
Schöffl F, Wunder M, Tucher R, Heumann W, Pühler A (1974)
Zentralbl Bakteriol Orig A 228(1).
PUB | WoS | PubMed | Europe PMC
 
[4]
1973 | Journal Article | PUB-ID: 2092597 PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
1972 | Journal Article | PUB-ID: 2092601
[Physical method for the isolation of DNA]
Mattes R, Pühler A (1972)
Hoppe Seylers Z Physiol Chem 353(10).
PUB | WoS | PubMed | Europe PMC
 
[2]
1972 | Journal Article | PUB-ID: 2092604
[Readiness for gene transfer in the Rhizobium lupini conjugation (brief report)]
Pühler A (1972)
Zentralbl Bakteriol Orig A 220(1).
PUB | WoS | PubMed | Europe PMC
 
[1]
1971 | Journal Article | PUB-ID: 2092606 PUB | DOI | WoS | PubMed | Europe PMC
 

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[519]
2017 | Journal Article | PUB-ID: 2908419
Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T
Torres Tejerizo GA, Wibberg D, Winkler A, Ormeño-Orrillo E, Martínez-Romero E, Niehaus K, Pühler A, Kalinowski J, Lagares A, Schlüter A, Pistorio M (2017)
Genome Announcements 5(4): e01513-16.
PUB | PDF | DOI
 
 
[517]
2017 | Journal Article | PUB-ID: 2913116
The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110
Wolf T, Droste J, Gren T, Ortseifen V, Schneiker-Bekel S, Zemke T, Pühler A, Kalinowski J (2017)
BMC Genomics 18: 62.
PUB | PDF | DOI
 
[516]
2017 | Journal Article | PUB-ID: 2912114
The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)
Verwaaijen B, Wibberg D, Kröber M, Winkler A, Zrenner R, Bednarz H, Niehaus K, Grosch R, Pühler A, Schlüter A (2017)
PLOS ONE 12(5): e0177278.
PUB | PDF | DOI
 
[515]
2017 | Journal Article | PUB-ID: 2911997
A metabolomic approach to characterize the acid-tolerance response in Sinorhizobium meliloti
Omar Draghi W, Florencia Del Papa M, Barsch A, Albicoro FJ, Lozano MJ, Pühler A, Niehaus K, Lagares A (2017)
METABOLOMICS 13(6): 71.
PUB | DOI | WoS
 
[514]
2017 | Journal Article | PUB-ID: 2911777
Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste
Torres Tejerizo GA, Kim YS, Maus I, Wibberg D, Winkler A, Off S, Pühler A, Scherer P, Schlüter A (2017)
JOURNAL OF BIOTECHNOLOGY 247: 1-5.
PUB | DOI | WoS | PubMed | Europe PMC
 
[513]
2017 | Journal Article | PUB-ID: 2911462
Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data
Alkhateeb R, Rückert C, Rupp O, Pucker B, Hublik G, Wibberg D, Niehaus K, Pühler A, Vorhölter F-J (2017)
Journal of Biotechnology.
PUB | DOI
 
[512]
2017 | Journal Article | PUB-ID: 2910369
Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis
Maus I, Kim YS, Wibberg D, Stolze Y, Off S, Antonczyk S, Pühler A, Scherer P, Schlüter A (2017)
JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY 27(2): 321-334.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[511]
2017 | Journal Article | PUB-ID: 2910373
Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales
Bartholomaus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2017)
ARCHIVES OF VIROLOGY 162(2): 555-559.
PUB | DOI | WoS | PubMed | Europe PMC
 
[510]
2016 | Journal Article | PUB-ID: 2908260
Rhizobium favelukesii sp nov., isolated from the root nodules of alfalfa (Medicago sativa L)
Torres Tejerizo GA, Antonio Rogel M, Ormeno-Orrillo E, Julia Althabegoiti M, Fernanda Nilsson J, Niehaus K, Schlüter A, Pühler A, Florencia Del Papa M, Lagares A, Martinez-Romero E, et al. (2016)
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 66: 4451-4457.
PUB | DOI | WoS
 
[509]
2016 | Journal Article | PUB-ID: 2901808 PUB | DOI | WoS | PubMed | Europe PMC
 
[508]
2016 | Journal Article | PUB-ID: 2907676
Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T)
Jaenicke S, Bunk B, Wibberg D, Spröer C, Hersemann L, Blom J, Winkler A, Schatschneider S, Albaum S, Kölliker R, Goesmann A, et al. (2016)
Genome Announcements 4(6): e01334-16.
PUB | PDF | DOI
 
[507]
2016 | Journal Article | PUB-ID: 2907431
Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV
Bartholomaeus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
PLOS ONE 11(11): e0165965.
PUB | DOI | WoS | PubMed | Europe PMC
 
[506]
2016 | Journal Article | PUB-ID: 2904691
Genomics of high molecular weight plasmids isolated from an on-farm biopurification system
Martini MC, Wibberg D, Lozano M, Torres Tejerizo G, Albicoro FJ, Jaenicke S, van Elsas JD, Petroni A, Pilar Garcillan-Barcia M, de la Cruz F, Schlüter A, et al. (2016)
Scientific Reports 6: 28284.
PUB | DOI | WoS | PubMed | Europe PMC
 
[505]
2016 | Journal Article | PUB-ID: 2902126
Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes
Liebe S, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
FEMS Microbiology Ecology 92(2): fiw004.
PUB | DOI | WoS
 
[504]
2016 | Journal Article | PUB-ID: 2905504
Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing
Kröber M, Verwaaijen B, Wibberg D, Winkler A, Pühler A, Schlüter A (2016)
Journal of Biotechnology 231: 212-223.
PUB | DOI | WoS | PubMed | Europe PMC
 
[503]
2016 | Journal Article | PUB-ID: 2905631
Applying DNA affinity chromatography to specifically screen for sucrose-related DNA-binding transcriptional regulators of Xanthomonas campestris
Leßmeier L, Alkhateeb R, Schulte F, Steffens T, Loka TP, Pühler A, Niehaus K, Vorhölter F-J (2016)
Journal of Biotechnology 232: 89-98.
PUB | DOI | WoS | PubMed | Europe PMC
 
[502]
2016 | Journal Article | PUB-ID: 2901243
Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Wolf T, Zemke T, Wehmeier UF, Hecker M, Kalinowski J, et al. (2016)
Journal of Proteomics 131: 140-148.
PUB | DOI | WoS | PubMed | Europe PMC
 
[501]
2016 | Journal Article | PUB-ID: 2901675
Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene.
Krahn T, Wibberg D, Maus I, Winkler A, Bontron S, Sczyrba A, Nordmann P, Pühler A, Poirel L, Schlüter A (2016)
Antimicrobial Agents and Chemotherapy 60(5): 3032-3040.
PUB | DOI | WoS | PubMed | Europe PMC
 
[500]
2016 | Journal Article | PUB-ID: 2905629
Complete genome analysis of Clostridium bornimense strain M2/40(T): A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor
Tomazetto G, Hahnke S, Koeck DE, Wibberg D, Maus I, Pühler A, Klocke M, Schlüter A (2016)
Journal of Biotechnology 232: 38-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[499]
2016 | Journal Article | PUB-ID: 2904993
Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor
Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
Genome Announcements 4(4): e00687-16.
PUB | PDF | DOI
 
[498]
2016 | Journal Article | PUB-ID: 2904978
Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor
Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
Genome Announcements 4(3): e00609-16.
PUB | PDF | DOI
 
[497]
2016 | Journal Article | PUB-ID: 2904970
Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor
Maus I, Wibberg D, Winkler A, Pühler A, Schnürer A, Schlüter A (2016)
Genome Announcements 4(3): e00568-16.
PUB | PDF | DOI
 
[496]
2016 | Journal Article | PUB-ID: 2906715
Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (vol 188, pg 136, 2014)
Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
Journal of Biotechnology 237: 35.
PUB | DOI | WoS | PubMed | Europe PMC
 
[495]
2016 | Journal Article | PUB-ID: 2905630
Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors
Gren T, Ortseifen V, Wibberg D, Schneiker-Bekel S, Bednarz H, Niehaus K, Zemke T, Persicke M, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 232: 79-88.
PUB | DOI | WoS | PubMed | Europe PMC
 
[494]
2016 | Journal Article | PUB-ID: 2905505
Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System
Wolf T, Gren T, Thieme E, Wibberg D, Zemke T, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 231: 122-128.
PUB | DOI | WoS | PubMed | Europe PMC
 
[493]
2016 | Journal Article | PUB-ID: 2903660
The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100
Steffens T, Vorhölter F-J, Giampa M, Hublik G, Pühler A, Niehaus K (2016)
BMC Microbiology 16: 93.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[492]
2016 | Journal Article | PUB-ID: 2905260
Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates
Maus I, Koeck DE, Cibis KG, Hahnke S, Kim YS, Langer T, Kreubel J, Erhard M, Bremges A, Off S, Stolze Y, et al. (2016)
Biotechnology for Biofuels 9(1): 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[491]
2016 | Journal Article | PUB-ID: 2903302
Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing
Wibberg D, Bremges A, Dammann-Kalinowski T, Maus I, Igeño MI, Vogelsang R, König C, Luque-Almagro VM, Roldán MD, Sczyrba A, Moreno-Vivián C, et al. (2016)
Journal of Biotechnology 232: 61-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[490]
2016 | Journal Article | PUB-ID: 2903489
Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment
Maus I, Cibis KG, Bremges A, Stolze Y, Wibberg D, Tomazetto G, Blom J, Sczyrba A, König H, Pühler A, Schlüter A (2016)
Journal of Biotechnology 232: 50-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[489]
2016 | Journal Article | PUB-ID: 2904815
Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants
Stolze Y, Bremges A, Rumming M, Henkel C, Maus I, Pühler A, Sczyrba A, Schlüter A (2016)
Biotechnology for Biofuels 9: 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[488]
2016 | Journal Article | PUB-ID: 2904234
An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant
Ortseifen V, Stolze Y, Maus I, Sczyrba A, Bremges A, Albaum S, Jaenicke S, Fracowiak J, Pühler A, Schlüter A (2016)
Journal of Biotechnology 231: 268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[487]
2016 | Journal Article | PUB-ID: 2900928
Back to the future of soil metagenomics
Nesme J, Achouak W, Agathos S, Bailey M, Baldrian P, Brunel D, Frostegard A, Heulin T, Jansson JK, Jurkevitch E, Kowalchuk GA, et al. (2016)
Frontiers in Microbiology 7: 73.
PUB | DOI | WoS | PubMed | Europe PMC
 
[486]
2016 | Journal Article | PUB-ID: 2905122
A consolidated analysis of the physiologic and molecular responses induced under acid stress in the legume-symbiont model-soil bacterium Sinorhizobium meliloti
Draghi WO, Del Papa MF, Hellweg C, Watt SA, Watt TF, Barsch A, Lozano MJ, Lagares, A. J, Salas ME, Lopez JL, Albicoro FJ, et al. (2016)
SCIENTIFIC REPORTS 6: 29278.
PUB | DOI | WoS | PubMed | Europe PMC
 
[485]
2015 | Journal Article | PUB-ID: 2911748
Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses
Krahn T, Wibberg D, Maus I, Winkler A, Pühler A, Poirel L, Schlüter A (2015)
Genome Announcements 3(4): e00850-15.
PUB | DOI
 
[484]
2015 | Journal Article | PUB-ID: 2764906
Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant
Bremges A, Maus I, Belmann P, Eikmeyer FG, Winkler A, Albersmeier A, Pühler A, Schlüter A, Sczyrba A (2015)
GigaScience 4: 33.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[483]
2015 | Journal Article | PUB-ID: 2782605
The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms
Rupp O, Brinkrolf K, Buerth C, Kunigo M, Schneider J, Jaenicke S, Goesmann A, Pühler A, Jaeger K-E, Ernst JF (2015)
Journal of Biotechnology 211: 20-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[482]
2015 | Journal Article | PUB-ID: 2778477
Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686
Dziewit L, Czarnecki J, Prochwicz E, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
Frontiers in Microbiology 6: 852.
PUB | DOI | WoS | PubMed | Europe PMC
 
[481]
2015 | Journal Article | PUB-ID: 2731076
Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals
Dziewit L, Pyzik A, Szuplewska M, Matlakowska R, Mielnicki S, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
Frontiers in Microbiology 6.
PUB | DOI | WoS | PubMed | Europe PMC
 
[480]
2015 | Journal Article | PUB-ID: 2761035
Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum
Arnold M, Wibberg D, Blom J, Schatschneider S, Winkler A, Kutter Y, Rückert C, Albersmeier A, Albaum S, Goesmann A, Zange S, et al. (2015)
Genome announcements 3(4).
PUB | DOI | PubMed | Europe PMC
 
[479]
2015 | Journal Article | PUB-ID: 2758122
Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951)
Wibberg D, Alkhateeb R, Winkler A, Albersmeier A, Schatschneider S, Albaum S, Niehaus K, Hublik G, Pühler A, Vorhölter F-J (2015)
Journal of Biotechnology 204: 45-46.
PUB | DOI | WoS | PubMed | Europe PMC
 
[478]
2015 | Journal Article | PUB-ID: 2709783
Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid
Ortseifen V, Winkler A, Albersmeier A, Wendler S, Pühler A, Kalinowski J, Rückert C (2015)
Journal of Biotechnology 194: 81-83.
PUB | DOI | WoS | PubMed | Europe PMC
 
[477]
2015 | Journal Article | PUB-ID: 2764307
Comprehensive proteome analysis of Actinoplanes sp SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Walter F, Wolf T, Zemke T, Wehmeier UF, Hecker M, et al. (2015)
Journal of Proteomics 125: 1-16.
PUB | DOI | WoS | PubMed | Europe PMC
 
[476]
2015 | Journal Article | PUB-ID: 2901214
Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor
Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2015)
Journal of Biotechnology 214: 59-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[475]
2015 | Journal Article | PUB-ID: 2758134
Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant
Maus I, Cibis KG, Wibberg D, Winkler A, Stolze Y, König H, Pühler A, Schlüter A (2015)
Journal of Biotechnology 203: 17-18.
PUB | DOI | WoS | PubMed | Europe PMC
 
[474]
2015 | Journal Article | PUB-ID: 2785064
Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1
Krahn T, Wibberg D, Maus I, Winkler A, Nordmann P, Pühler A, Poirel L, Schlüter A (2015)
Genome Announcements 3(5): e01008-15.
PUB | PDF | DOI
 
[473]
2015 | Journal Article | PUB-ID: 2717648
Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor
Hahnke S, Maus I, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2015)
Journal of Biotechnology 193: 34-36.
PUB | DOI | WoS | PubMed | Europe PMC
 
[472]
2015 | Journal Article | PUB-ID: 2901297
Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates
Wibberg D, Rupp O, Blom J, Jelonek L, Kröber M, Verwaaijen B, Goesmann A, Albaum S, Grosch R, Pühler A, Schlüter A (2015)
Plos One 10(12): e0144769.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[471]
2015 | Journal Article | PUB-ID: 2758144
Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system
Wibberg D, Rupp O, Jelonek L, Kröber M, Verwaaijen B, Blom J, Winkler A, Goesmann A, Grosch R, Pühler A, Schlüter A (2015)
Journal of Biotechnology 203: 19-21.
PUB | DOI | WoS | PubMed | Europe PMC
 
[470]
2015 | Journal Article | PUB-ID: 2733509
Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants
Maus I, Wibberg D, Stantscheff R, Stolze Y, Blom J, Eikmeyer FG, Fracowiak J, König H, Pühler A, Schlüter A (2015)
Journal of Biotechnology 201: 43-53.
PUB | DOI | WoS | PubMed | Europe PMC
 
[469]
2015 | Journal Article | PUB-ID: 2768627
Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing
Eikmeyer FG, Heinl S, Marx H, Pühler A, Grabherr R, Schlüter A (2015)
PLoS ONE 10(7): e0134149.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[468]
2015 | Journal Article | PUB-ID: 2722382
Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions
Stolze Y, Zakrzewski M, Maus I, Eikmeyer FG, Jaenicke S, Rottmann N, Siebner C, Pühler A, Schlüter A (2015)
Biotechnology for Biofuels 8: 14.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[467]
2015 | Journal Article | PUB-ID: 2719679
The Sinorhizobium fredii HH103 genome: a comparative analysis with S. fredii strains differing in their symbiotic behaviour with soybean
Vinardell JM, Acosta-Jurado S, Göttfert M, Zehner S, Becker A, Baena-Ropero I, Blom J, Crespo-Rivas JC, Goesmann A, Jaenicke S, Krol E, et al. (2015)
Molecular Plant-Microbe Interactions.
PUB | DOI | WoS | PubMed | Europe PMC
 
[466]
2014 | Journal Article | PUB-ID: 2658490
Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids
Dziewit L, Czarnecki J, Wibberg D, Radlinska M, Mrozek P, Szymczak M, Schlüter A, Pühler A, Bartosik D (2014)
BMC Genomics 15(1): 124.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[465]
2014 | Journal Article | PUB-ID: 2678800
Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing
Kröber M, Wibberg D, Grosch R, Eikmeyer FG, Verwaaijen B, Chowdhury SP, Hartmann A, Pühler A, Schlüter A (2014)
Frontiers in Microbiology 5: 252.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[464]
2014 | Journal Article | PUB-ID: 2694915
Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw
Hahnke S, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2014)
Journal of Biotechnology 184: 199-200.
PUB | DOI | WoS | PubMed | Europe PMC
 
[463]
2014 | Journal Article | PUB-ID: 2675608
Genome sequence of the acid-tolerant strain Rhizobium sp LPU83
Wibberg D, Torres Tejerizo G, Florencia Del Papa M, Martini C, Pühler A, Lagares A, Schlüter A, Pistorio M (2014)
Journal of Biotechnology 176: 40-41.
PUB | DOI | WoS | PubMed | Europe PMC
 
[462]
2014 | Journal Article | PUB-ID: 2685861
Rhizobial plasmid pLPU83a is able to switch between different transfer machineries depending on its genomic background
Torres Tejerizo G, Pistorio M, Althabegoiti MJ, Cervantes L, Wibberg D, Schlüter A, Pühler A, Lagares A, Romero D, Brom S (2014)
FEMS Microbiology Ecology 88(3): 565-578.
PUB | DOI | WoS | PubMed | Europe PMC
 
[461]
2014 | Journal Article | PUB-ID: 2672926
Genome Sequence of the Acute Urethral Catheter Isolate Pseudomonas aeruginosa MH38
Wibberg D, Tielen P, Blom J, Rosin N, Schobert M, Tüpker R, Schatschneider S, Spilker D, Albersmeier A, Goesmann A, Vorhölter F-J, et al. (2014)
Genome announcements 2(2): e00161-14.
PUB | PDF | DOI | PubMed | Europe PMC
 
[460]
2014 | Journal Article | PUB-ID: 2651944
Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection
Tielen P, Wibberg D, Blom J, Rosin N, Meyer A-K, Bunk B, Schobert M, Tüpker R, Schatschneider S, Rückert C, Albersmeier A, et al. (2014)
Genome announcements 2(1).
PUB | DOI | PubMed | Europe PMC
 
[459]
2014 | Journal Article | PUB-ID: 2699819
Metabolic flux pattern of glucose utilization by Xanthomonas campestris pv. campestris: prevalent role of the Entner-Doudoroff pathway and minor fluxes through the pentose phosphate pathway and glycolysis
Schatschneider S, Huber C, Neuweger H, Watt T, Pühler A, Eisenreich W, Wittmann C, Niehaus K, Vorhölter F-J (2014)
Molecular BioSystems 10(10): 2663-2676.
PUB | DOI | WoS | PubMed | Europe PMC
 
[458]
2014 | Journal Article | PUB-ID: 2710431
Carbon source dependent biosynthesis of acarviose metabolites in Actinoplanes sp SE50/110
Wendler S, Ortseifen V, Persicke M, Klein A, Neshat A, Niehaus K, Schneiker-Bekel S, Walter F, Wehmeier UF, Kalinowski J, Pühler A (2014)
Journal of Biotechnology 191: 113-120.
PUB | DOI | WoS | PubMed | Europe PMC
 
[457]
2014 | Journal Article | PUB-ID: 2665038
Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts
Schwientek P, Neshat A, Kalinowski J, Klein A, Rückert C, Schneiker-Bekel S, Wendler S, Stoye J, Pühler A (2014)
Journal of Biotechnology 190: 85-95.
PUB | DOI | WoS | PubMed | Europe PMC
 
[456]
2014 | Journal Article | PUB-ID: 2707731
Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant
Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2014)
Journal of Biotechnology 188: 136-137.
PUB | DOI | WoS | PubMed | Europe PMC
 
[455]
2014 | Journal Article | PUB-ID: 2717539
Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT
Maus I, Stantscheff R, Wibberg D, Stolze Y, Winkler A, Pühler A, König H, Schlüter A (2014)
Journal of Biotechnology 192: 40-41.
PUB | DOI | WoS | PubMed | Europe PMC
 
[454]
2014 | Journal Article | PUB-ID: 2717549 PUB | DOI | WoS | PubMed | Europe PMC
 
[453]
2014 | Journal Article | PUB-ID: 2717558
First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant
Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Liebl W, Schlüter A (2014)
Journal of Biotechnology 192: 154-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[452]
2014 | Journal Article | PUB-ID: 2693310
Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs)
Wibberg D, Jelonek L, Rupp O, Kröber M, Goesmann A, Grosch R, Pühler A, Schlüter A (2014)
Fungal Biology 118(9-10): 800-813.
PUB | DOI | WoS | PubMed | Europe PMC
 
[451]
2014 | Journal Article | PUB-ID: 2685988
Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing
Jakobi T, Brinkrolf K, Tauch A, Noll T, Stoye J, Pühler A, Goesmann A (2014)
Journal of Biotechnology 190: 64-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
[450]
2014 | Journal Article | PUB-ID: 2676049
IncH-type plasmid harboring the blaCTX-M-15, blaDHA-1, and qnrB4 genes recovered from animal isolates
Schlüter A, Nordmann P, Bonnin RA, Millemann Y, Eikmeyer FG, Wibberg D, Pühler A, Poirel L (2014)
Antimicrobial Agents and Chemotherapy 58(7): 3768-3773.
PUB | DOI | WoS | PubMed | Europe PMC
 
[449]
2014 | Journal Article | PUB-ID: 2662055
Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Wibberg D, Luque-Almagro VM, Igeño MI, Bremges A, Roldán MD, Merchán F, Sáez LP, Guijo MI, Manso MI, Macías D, Cabello P, et al. (2014)
Journal of biotechnology 175: 67-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[448]
2014 | Journal Article | PUB-ID: 2676552
Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)
Becker J, Timmermann C, Rupp O, Albaum S, Brinkrolf K, Goesmann A, Pühler A, Tauch A, Noll T (2014)
Journal of biotechnology 178: 23-31.
PUB | DOI | WoS | PubMed | Europe PMC
 
[447]
2014 | Journal Article | PUB-ID: 2656773
Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines
Rupp O, Becker J, Brinkrolf K, Timmermann C, Borth N, Pühler A, Noll T, Goesmann A (2014)
PLoS ONE 9(1): e85568.
PUB | DOI | WoS | PubMed | Europe PMC
 
[446]
2014 | Journal Article | PUB-ID: 2684336
Concept of Law in Biology Synthetic Biology - Towards an Engineering Science
Weitze M-D, Pühler A (2014)
European Review 22: S102-S112.
PUB | DOI | WoS
 
[445]
2014 | Journal Article | PUB-ID: 2710114
The Crystal Structures of Apo and cAMP-Bound GlxR from Corynebacterium glutamicum Reveal Structural and Dynamic Changes upon cAMP Binding in CRP/FNR Family Transcription Factors
Townsend PD, Jungwirth B, Pojer F, Bußmann M, Money VA, Cole ST, Pühler A, Tauch A, Bott M, Cann MJ, Pohl E (2014)
PloS one 9(12): 113265.
PUB | DOI | WoS | PubMed | Europe PMC
 
[444]
2014 | Book Chapter | PUB-ID: 2694187
Functional -Omics for Cell Lines and Processes - The -Omics Technologies on the Example of CHO Cells
Brinkrolf K, Hoffrogge R, Hackl M, Tauch A, Baumann M, Noll T, Goesmann A, Pühler A, Borth N (2014)
In: Animal Cell Biotechnology In Biologics Production. Hauser H, Wagner R (Eds); Berlin, Germany: Walter de Gruyter.
PUB
 
[443]
2014 | Journal Article | PUB-ID: 2701280
The Genomics Revolution and its Impact on Future Biotechnology
Noll T, Pühler A, Weisshaar B, Wendisch VF (2014)
Journal of Biotechnology 190: 1-1.
PUB | DOI | WoS | PubMed | Europe PMC
 
[442]
2014 | Journal Article | PUB-ID: 2664976
Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkämper A, Pühler A, Biener R, Schwartz D, Kalinowski J (2014)
Journal of biotechnology 178: 41-42.
PUB | DOI | WoS | PubMed | Europe PMC
 
[441]
2013 | Journal Article | PUB-ID: 2615581
Chinese hamster genome sequenced from sorted chromosomes
Brinkrolf K, Rupp O, Laux H, Kollin F, Ernst W, Linke B, Kofler R, Romand S, Hesse F, Budach WE, Galosy S, et al. (2013)
Nature Biotechnology 31(8): 694-695.
PUB | DOI | WoS | PubMed | Europe PMC
 
[440]
2013 | Journal Article | PUB-ID: 2631969
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 714.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[439]
2013 | Journal Article | PUB-ID: 2605230
Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation
Hanreich A, Schimpf U, Zakrzewski M, Schlüter A, Benndorf D, Heyer R, Rapp E, Pühler A, Reichl U, Klocke M (2013)
Systematic and Applied Microbiology 36(5): 330-338.
PUB | DOI | WoS | PubMed | Europe PMC
 
[438]
2013 | Journal Article | PUB-ID: 2548286
Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Luque-Almagro VM, Acera F, Igeño MI, Wibberg D, Roldán MD, Sáez LP, Hennig M, Quesada A, Huertas MJ, Blom J, Merchán F, et al. (2013)
Environmental Microbiology 15(1): 253-270.
PUB | DOI | WoS | PubMed | Europe PMC
 
[437]
2013 | Journal Article | PUB-ID: 2635526
Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation
Koeck DE, Wibberg D, Koellmeier T, Blom J, Jaenicke S, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Schlüter A (2013)
Journal of Biotechnology 168(1): 62-63.
PUB | DOI | WoS | PubMed | Europe PMC
 
[436]
2013 | Journal Article | PUB-ID: 2605193
Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms
Eikmeyer FG, Rademacher A, Hanreich A, Hennig M, Jaenicke S, Maus I, Wibberg D, Zakrzewski M, Pühler A, Klocke M, Schlüter A (2013)
Biotechnology for Biofuels 6(1): 49.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[435]
2013 | Journal Article | PUB-ID: 2633427
Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis
Wibberg D, Blom J, Rückert C, Winkler A, Albersmeier A, Pühler A, Schlüter A, Scharf BE (2013)
Journal of Biotechnology 168(4): 731-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[434]
2013 | Journal Article | PUB-ID: 2614906
The cytosolic and extracellular proteomes of Actinoplanes sp. SE50/110 led to the identification of gene products involved in acarbose metabolism
Wendler S, Hürtgen D, Kalinowski J, Klein A, Niehaus K, Schulte F, Schwientek P, Wehlmann H, Wehmeier UF, Pühler A (2013)
Journal of Biotechnology 167(2): 178-189.
PUB | DOI | WoS | PubMed | Europe PMC
 
[433]
2013 | Journal Article | PUB-ID: 2605244
Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100
Schatschneider S, Persicke M, Watt T, Hublik G, Pühler A, Niehaus K, Vorhölter F-J (2013)
Journal of Biotechnology 167(2): 123-134.
PUB | DOI | WoS | PubMed | Europe PMC
 
[432]
2013 | Journal Article | PUB-ID: 2632946
Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil
Köhler KAK, Rückert C, Schatschneider S, Vorhölter F-J, Szczepanowski R, Blank LM, Niehaus K, Goesmann A, Pühler A, Kalinowski J, Schmid A (2013)
Journal of Biotechnology 168(4): 729-730.
PUB | DOI | WoS | PubMed | Europe PMC
 
[431]
2013 | Journal Article | PUB-ID: 2548236
Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media
Schwientek P, Wendler S, Neshat A, Eirich C, Rückert C, Klein A, Wehmeier UF, Kalinowski J, Stoye J, Pühler A (2013)
Journal of Biotechnology 167(2): 166-177.
PUB | DOI | WoS | PubMed | Europe PMC
 
[430]
2013 | Journal Article | PUB-ID: 2565642
Genomes of Stigonematalean Cyanobacteria (Subsection V) and the Evolution of Oxygenic Photosynthesis from Prokaryotes to Plastids
Dagan T, Roettger M, Stucken K, Landan G, Koch R, Major P, Gould SB, Goremykin VV, Rippka R, de Marsac NT, Gugger M, et al. (2013)
Genome Biology And Evolution 5(1): 31-44.
PUB | DOI | WoS | PubMed | Europe PMC
 
[429]
2013 | Journal Article | PUB-ID: 2645247
Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp Mb1 isolated from a production-scale biogas plant
Maus I, Wibberg D, Stantscheff R, Cibis K, Eikmeyer FG, König H, Pühler A, Schlüter A (2013)
Journal of Biotechnology 168(4): 734-736.
PUB | DOI | WoS | PubMed | Europe PMC
 
[428]
2013 | Journal Article | PUB-ID: 2557080
Complete sequence of broad-host-range plasmid pNOR-2000 harbouring the metallo-beta-lactamase gene blaVIM-2 from Pseudomonas aeruginosa
Bonnin RA, Poirel L, Nordmann P, Eikmeyer FG, Wibberg D, Pühler A, Schlüter A (2013)
Journal of Antimicrobial Chemotherapy 68(5): 1060-1065.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[426]
2013 | Journal Article | PUB-ID: 2614207
Metagenome analyses reveal the influence of the inoculant Lactobacillus buchneri CD034 on the microbial community involved in grass silaging
Eikmeyer FG, Köfinger P, Poschenel A, Jünemann S, Zakrzewski M, Heinl S, Mayrhuber E, Grabherr R, Pühler A, Schwab H, Schlüter A (2013)
Journal of Biotechnology 167(3): 334-343.
PUB | DOI | WoS | PubMed | Europe PMC
 
[425]
2013 | Journal Article | PUB-ID: 2549908
Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14
Wibberg D, Jelonek L, Rupp O, Kröber M, Eikmeyer FG, Goesmann A, Hartmann A, Borriss R, Grosch R, Pühler A, Schlüter A (2013)
Journal of Biotechnology 167(2): 142-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[424]
2013 | Journal Article | PUB-ID: 2529202
MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets
Zakrzewski M, Bekel T, Ander C, Pühler A, Rupp O, Stoye J, Schlüter A, Goesmann A (2013)
Journal of Biotechnology 167(2): 156-165.
PUB | DOI | WoS | PubMed | Europe PMC
 
[423]
2013 | Journal Article | PUB-ID: 2631956
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Iftime D, Musiol EM, Blin K, Wohlleben W, Pühler A, Kalinowski J, Weber T (2013)
Journal of Biotechnology 168(4): 739-740.
PUB | DOI | WoS | PubMed | Europe PMC
 
[422]
2013 | Journal Article | PUB-ID: 2555355
A propionate-inducible expression system based on the Corynebacterium glutamicum prpD2 promoter and PrpR activator and its application for the redirection of amino acid biosynthesis pathways
Plassmeier J, Busche T, Molck S, Persicke M, Pühler A, Rückert C, Kalinowski J (2013)
Journal of Biotechnology 163(2): 225-232.
PUB | DOI | WoS | PubMed | Europe PMC
 
[421]
2013 | Book (Editor) | PUB-ID: 2547769
Biotechnologie-Kommunikation. Kontroversen, Analysen, Aktivitäten
Weitze M-D, Pühler A, Heckl WM, Müller-Röber W, Renn O, Weingart P, Wess G (Eds) (2013) acatech DISKUSSION.
Berlin, Heidelberg: Springer Vieweg.
PUB | DOI
 
[420]
2013 | Journal Article | PUB-ID: 2557779
Genome Sequence of Sinorhizobium meliloti Rm41
Weidner S, Baumgarth B, Göttfert M, Jaenicke S, Pühler A, Schneiker-Bekel S, Serrania J, Szczepanowski R, Becker A (2013)
Genome Announcements 1(1): e00013-12.
PUB | DOI | PubMed | Europe PMC
 
[419]
2013 | Journal Article | PUB-ID: 2548270
High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum
Jungwirth B, Sala C, Kohl TA, Uplekar S, Baumbach J, Cole ST, Pühler A, Tauch A (2013)
Microbiology 159(Pt_1): 12-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[418]
2012 | Journal Article | PUB-ID: 2471681
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing
Rademacher A, Zakrzewski M, Schlüter A, Schonberg M, Szczepanowski R, Goesmann A, Pühler A, Klocke M (2012)
FEMS Microbiology Ecology 79(3): 785-799.
PUB | DOI | WoS | PubMed | Europe PMC
 
[417]
2012 | Journal Article | PUB-ID: 2472279
The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution
Eikmeyer FG, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CB, Top EM, Pühler A, Schlüter A (2012)
Plasmid 68(1): 13-24.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[416]
2012 | Journal Article | PUB-ID: 2526298
Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester
Maus I, Wibberg D, Stantscheff R, Eikmeyer FG, Seffner A, Boelter J, Szczepanowski R, Blom J, Jaenicke S, König H, Pühler A, et al. (2012)
Journal of Bacteriology 194(19): 5487-5488.
PUB | DOI | WoS | PubMed | Europe PMC
 
[415]
2012 | Journal Article | PUB-ID: 2486060
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A (2012)
BMC Genomics 13(1): 112.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[414]
2012 | Journal Article | PUB-ID: 2544774
Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10
Schneider J, Andrea H, Blom J, Jaenicke S, Rückert C, Schorsch C, Szczepanowski R, Farwick M, Goesmann A, Pühler A, Schaffer S, et al. (2012)
Eukaryotic Cell 11(12): 1582-1583.
PUB | DOI | WoS | PubMed | Europe PMC
 
[413]
2012 | Journal Article | PUB-ID: 2501364
Utilization and evaluation of CHO-specific sequence databases for mass spectrometry based proteomics
Meleady P, Hoffrogge R, Henry M, Rupp O, Bort JH, Clarke C, Brinkrolf K, Kelly S, Müller B, Doolan P, Hackl M, et al. (2012)
Biotechnology and Bioengineering 109(6): 1386-1394.
PUB | DOI | WoS | PubMed | Europe PMC
 
[412]
2012 | Journal Article | PUB-ID: 2478526
Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines
Hackl M, Jadhav V, Jakobi T, Rupp O, Brinkrolf K, Goesmann A, Pühler A, Noll T, Borth N, Grillari J (2012)
Journal of Biotechnology 158(3): 151-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[411]
2012 | Journal Article | PUB-ID: 2484618
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing
Zakrzewski M, Goesmann A, Jaenicke S, Jünemann S, Eikmeyer FG, Szczepanowski R, Al-Soud WA, Sørensen S, Pühler A, Schlüter A (2012)
Journal of Biotechnology 158(4): 248-258.
PUB | DOI | WoS | PubMed | Europe PMC
 
[410]
2012 | Journal Article | PUB-ID: 2490535
Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage
Heinl S, Wibberg D, Eikmeyer FG, Szczepanowski R, Blom J, Linke B, Goesmann A, Grabherr R, Schwab H, Pühler A, Schlüter A (2012)
Journal of Biotechnology 161(2): 153-166.
PUB | DOI | WoS | PubMed | Europe PMC
 
[409]
2012 | Journal Article | PUB-ID: 2529610
Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198
Schork S, Schlüter A, Blom J, Schneiker-Bekel S, Pühler A, Goesmann A, Frosch M, Schoen C (2012)
Journal of Bacteriology 194(18): 5144-5145.
PUB | DOI | WoS | PubMed | Europe PMC
 
[408]
2012 | Journal Article | PUB-ID: 2537690 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[407]
2012 | Journal Article | PUB-ID: 2526269
Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
Strobel T, Al-Dilaimi A, Blom J, Gessner A, Kalinowski J, Luzhetska M, Pühler A, Szczepanowski R, Bechthold A, Rückert C (2012)
BMC Genomics 13(1): 465.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[406]
2012 | Journal Article | PUB-ID: 2501774
Microbes and industrial biotechnology
Wendisch VF, Pühler A (2012)
Journal of Biotechnology 158(4): 157-158.
PUB | DOI | WoS
 
[405]
2012 | Journal Article | PUB-ID: 2500966
Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes
Hain T, Ghai R, Billion A, Kuenne CT, Steinweg C, Izar B, Mohamed W, Mraheil M, Domann E, Schaffrath S, Kärst U, et al. (2012)
BMC Genomics 13(1): 144.
PUB | DOI | WoS | PubMed | Europe PMC
 
[404]
2012 | Journal Article | PUB-ID: 2553286
Current research and future perspectives of applied biotechnology
Jungbauer A, Scheper T, Pühler A (2012)
Journal of Biotechnology 162(4): 355.
PUB | DOI | WoS | PubMed | Europe PMC
 
[403]
2012 | Journal Article | PUB-ID: 2513297
On the trail of EHEC/EAEC-unraveling the gene regulatory networks of human pathogenic Escherichia coli bacteria
Pauling J, Rottger R, Neuner A, Salgado H, Collado-Vides J, Kalaghatgi P, Azevedo V, Tauch A, Pühler A, Baumbach J (2012)
Integrative Biology 4(7): 728-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[402]
2012 | Journal Article | PUB-ID: 2473849
Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103
Weidner S, Becker A, Bonilla I, Jaenicke S, Lloret J, Margaret I, Pühler A, Ruiz-Sainz JE, Schneiker-Bekel S, Szczepanowski R, Vinardell JM, et al. (2012)
Journal of Bacteriology 194(6): 1617-1618.
PUB | DOI | WoS | PubMed | Europe PMC
 
[401]
2012 | Journal Article | PUB-ID: 2501307
Research on industrial biotechnology within the CLIB-Graduate Cluster - Part I
Pietruszka J, Pühler A, Schembecker G (2012)
Journal of Biotechnology 159(3): 121-122.
PUB | DOI | WoS | PubMed | Europe PMC
 
[400]
2011 | Conference Abstract | PUB-ID: 2453768
Next-generation sequencing of the CHO cell transcriptome
Becker J, Timmermann C, Jakobi T, Rupp O, Szczepanowski R, Hackl M, Goesmann A, Tauch A, Borth N, Grillari J, Pühler A, et al. (2011)
BMC Proceedings 5(Suppl. 8): P6.
PUB | DOI
 
[399]
2011 | Journal Article | PUB-ID: 2087955
Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Höner zu Siederdissen C, Bort JAH, Wieser M, Kunert R, et al. (2011)
Journal of Biotechnology 153(1-2): 62-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
[398]
2011 | Book Chapter | PUB-ID: 2447751
Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods
Jaenicke S, Zakrzewski M, Jünemann S, Pühler A, Goesmann A, Schlüter A (2011)
In: Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. de Bruijn FJ (Ed); Wiley-Blackwell: 403-414.
PUB | DOI
 
[397]
2011 | Journal Article | PUB-ID: 2017892
The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome
Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorhölter F-J, Weidner S, Goesmann A, Pühler A, et al. (In Press)
Journal of Biotechnology 155(1): 20-33.
PUB | DOI | WoS | PubMed | Europe PMC
 
[396]
2011 | Journal Article | PUB-ID: 2354731
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Szczepanowski R, Goesmann A, Setubal JC, Schmitt R, et al. (2011)
Journal of Biotechnology 155(1): 50-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[395]
2011 | Journal Article | PUB-ID: 2354746
Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology
Schwientek P, Szczepanowski R, Rückert C, Stoye J, Pühler A (2011)
Journal of Biotechnology 155(1): 68-77.
PUB | DOI | WoS | PubMed | Europe PMC
 
[394]
2011 | Journal Article | PUB-ID: 2317371
High-quality genome sequence of Pichia pastoris CBS7435
Küberl A, Schneider J, Thallinger GG, Anderl I, Wibberg D, Hajek T, Jaenicke S, Brinkrolf K, Goesmann A, Szczepanowski R, Pühler A, et al. (2011)
Journal of Biotechnology 154(4): 312-320.
PUB | DOI | WoS | PubMed | Europe PMC
 
[393]
2011 | Journal Article | PUB-ID: 2404874
Genome-enabled determination of amino acid biosynthesis in Xanthomonas campestris pv. campestris and identification of biosynthetic pathways for alanine, glycine, and isoleucine by 13C-isotopologue profiling
Schatschneider S, Vorhölter F-J, Rückert C, Becker A, Eisenreich W, Pühler A, Niehaus K (2011)
Molecular Genetics and Genomics 286(3-4): 247-259.
PUB | DOI | WoS | PubMed | Europe PMC
 
[392]
2011 | Journal Article | PUB-ID: 2396576
Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing
Becker J, Hackel M, Jakobi T, Rupp O, Schneider J, Szczepanowski R, Bekel T, Borth N, Goesmann A, Grillari J, Kaltschmidt C, et al. (2011)
Journal of Biotechnology 156(3): 227-235.
PUB | DOI | WoS | PubMed | Europe PMC
 
[391]
2011 | Journal Article | PUB-ID: 2003276
Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing
Jaenicke S, Ander C, Bekel T, Bisdorf R, Dröge M, Gartemann K-H, Jünemann S, Kaiser O, Krause L, Tille F, Zakrzewski M, et al. (2011)
PLoS ONE 6(1): e14519.
PUB | DOI | WoS | PubMed | Europe PMC
 
[390]
2011 | Journal Article | PUB-ID: 1968039
The Nodulation of Alfalfa by the Acid-Tolerant Rhizobium sp. Strain LPU83 Does Not Require Sulfated Forms of Lipochitooligosaccharide Nodulation Signals
Torres Tejerizo G, Florencia Del Papa M, Eugenia Soria-Diaz M, Draghi W, Lozano M, de los Angeles Giusti M, Manyani H, Megias M, Gil Serrano A, Pühler A, Niehaus K, et al. (2011)
Journal of Bacteriology 193(1): 30-39.
PUB | DOI | WoS | PubMed | Europe PMC
 
[389]
2011 | Journal Article | PUB-ID: 2404808
Molecular characterization of PrpR, the transcriptional activator of propionate catabolism in Corynebacterium glutamicum
Plassmeier J, Persicke M, Pühler A, Sterthoff C, Rückert C, Kalinowski J (2011)
Journal of Biotechnology 159(1-2): 1-11.
PUB | DOI | WoS | PubMed | Europe PMC
 
[388]
2011 | Journal Article | PUB-ID: 2289494
Size exclusion chromatography-An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites
Persicke M, Plassmeier J, Neuweger H, Rückert C, Pühler A, Kalinowski J (2011)
Journal of Biotechnology 154(2-3): 171-178.
PUB | DOI | WoS | PubMed | Europe PMC
 
[387]
2011 | Journal Article | PUB-ID: 2375954 PUB | DOI | WoS | PubMed | Europe PMC
 
[386]
2011 | Journal Article | PUB-ID: 2317680
Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris
Zhou L, Vorhölter F-J, He Y-Q, Jiang B-L, Tang J-L, Xu Y, Pühler A, He Y-W (2011)
BMC Genomics 12(1): 359.
PUB | DOI | WoS | PubMed | Europe PMC
 
[385]
2011 | Journal Article | PUB-ID: 2375634
The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis
Pothier JF, Vorhölter F-J, Blom J, Goesmann A, Pühler A, Smits TH, Duffy B (2011)
FEMS Microbiology Letters 323(1): 52-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[384]
2011 | Journal Article | PUB-ID: 2401477
Towards sustainable biotechnology
Mattiasson B, Pühler A (2011)
Journal of Biotechnology 152(4): 113.
PUB | DOI | WoS | PubMed | Europe PMC
 
[383]
2011 | Journal Article | PUB-ID: 2326481
Insights into the genome of the xanthan-producing phytopathogen Xanthomonas arboricola pv. pruni 109 by comparative genomic hybridization
Mayer L, Vendruscolo CT, da Silva WP, Vorhölter F-J, Becker A, Pühler A (2011)
Journal of Biotechnology 155(1): 40-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[382]
2010 | Journal Article | PUB-ID: 1785275
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion
Trost E, Götker S, Schneider J, Schneiker-Bekel S, Szczepanowski R, Tilker A, Viehöver P, Arnold W, Bekel T, Blom J, Gartemann K-H, et al. (2010)
BMC Genomics 11(1): 91.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[381]
2010 | Journal Article | PUB-ID: 1929311
BioImaging: Contributions from biology, physics and informatics
Gölzhäuser A, Nattkemper TW, Niehaus K, Pühler A, Sauer M (2010)
Journal of Biotechnology 149(4): 227-228.
PUB | DOI | WoS | PubMed | Europe PMC
 
[380]
2010 | Journal Article | PUB-ID: 1588692
Complete Genome Sequence of Listeria seeligeri, a Nonpathogenic Member of the Genus Listeria
Steinweg C, Kuenne CT, Billion A, Mraheil MA, Domann E, Ghai R, Barbuddhe SB, Kaerst U, Goesmann A, Pühler A, Weisshaar B, et al. (2010)
Journal of Bacteriology 192(5): 1473-1474.
PUB | DOI | WoS | PubMed | Europe PMC
 
[379]
2010 | Journal Article | PUB-ID: 2486400
Advanced Genomics and Transcriptomics of Industrial Microorganisms
Kalinowski J, Rückert C, Szczepanowski R, Pühler A (2010)
Chemie Ingenieur Technik 82(9): 1518-1519.
PUB | DOI
 
[378]
2010 | Journal Article | PUB-ID: 1903875
The role of sigma factor RpoH1 in the pH stress response of Sinorhizobium meliloti
de Lucena DK, Pühler A, Weidner S (2010)
BMC Microbiology 10(1): 256.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[377]
2009 | Journal Article | PUB-ID: 1783187
EDGAR: a software framework for the comparative analysis of prokaryotic genomes
Blom J, Albaum S, Doppmeier D, Pühler A, Vorhölter F-J, Zakrzewski M, Goesmann A (2009)
BMC Bioinformatics 10(1): 154.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[376]
2009 | Journal Article | PUB-ID: 1634447
The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies
Bekel T, Henckel K, Küster H, Meyer F, Mittard-Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, et al. (2009)
Journal of Biotechnology 140(1-2): 3-12.
PUB | DOI | WoS | PubMed | Europe PMC
 
[375]
2009 | Journal Article | PUB-ID: 1635321
EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data
Dondrup M, Albaum S, Griebel T, Henckel K, Jünemann S, Kahlke T, Kleindt CK, Kuester H, Linke B, Mertens D, Mittard-Runte V, et al. (2009)
BMC Bioinformatics 10(1): 50.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[374]
2009 | Journal Article | PUB-ID: 1591546
Detection of 140 clinically relevant antibiotic-resistance genes in the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to selected antibiotics
Szczepanowski R, Linke B, Krahn I, Gartemann K-H, Guetzkow T, Eichler W, Pühler A, Schlueter A (2009)
MICROBIOLOGY 155(7): 2306-2319.
PUB | DOI | WoS | PubMed | Europe PMC
 
[373]
2009 | Journal Article | PUB-ID: 1635951
Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032
Nentwich SS, Brinkrolf K, Gaigalat L, Hueser AT, Rey DA, Mohrbach T, Marin K, Pühler A, Tauch A, Kalinowski J (2009)
MICROBIOLOGY 155(1): 150-164.
PUB | DOI | WoS | PubMed | Europe PMC
 
[372]
2009 | Journal Article | PUB-ID: 1633812
Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays
Jochmann N, Kurze A-K, Czaja LF, Brinkrolf K, Brune I, Hueser AT, Hansmeier N, Pühler A, Borovok I, Tauch A (2009)
MICROBIOLOGY 155(5): 1459-1477.
PUB | DOI | WoS | PubMed | Europe PMC
 
[371]
2009 | Journal Article | PUB-ID: 1635309 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[370]
2009 | Journal Article | PUB-ID: 1634467
A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data
Becker A, Barnett MJ, Capela D, Dondrup M, Kamp P-B, Krol E, Linke B, Rüberg S, Runte K, Schroeder BK, Weidner S, et al. (2009)
JOURNAL OF BIOTECHNOLOGY 140(1-2): 45-50.
PUB | DOI | WoS | PubMed | Europe PMC
 
[369]
2009 | Journal Article | PUB-ID: 1591844
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing
Kroeber M, Bekel T, Diaz NN, Goesmann A, Jaenicke S, Krause L, Miller D, Runte KJ, Viehoever P, Pühler A, Schlueter A (2009)
JOURNAL OF BIOTECHNOLOGY 142(1): 38-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[368]
2009 | Journal Article | PUB-ID: 1634097
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide
Strittmatter AW, Liesegang H, Rabus R, Decker I, Amann J, Andres S, Henne A, Fricke WF, Martinez-Arias R, Bartels D, Goesmann A, et al. (2009)
ENVIRONMENTAL MICROBIOLOGY 11(5): 1038-1055.
PUB | DOI | WoS | PubMed | Europe PMC
 
[367]
2009 | Journal Article | PUB-ID: 1634443
Functional genome research on bacteria relevant for agriculture, environment and biotechnology
Pühler A, Selbitschka W (2009)
JOURNAL OF BIOTECHNOLOGY 140(1-2): 1-2.
PUB | DOI | WoS | PubMed | Europe PMC
 
[366]
2008 | Journal Article | PUB-ID: 1585987
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology
Schlüter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann K-H, Krahn I, Krause L, Kroemeke H, Kruse O, Mussgnug JH, et al. (2008)
Journal of Biotechnology 136(1-2): 77-90.
PUB | DOI | WoS | PubMed | Europe PMC
 
[365]
2008 | Journal Article | PUB-ID: 1592318
Host genes involved in nodulation preference in common bean (Phaseolus vulgaris)-Rhizobium etli symbiosis revealed - by suppressive subtractive hybridization
Meschini EP, Blanco FA, Zanetti ME, Beker MP, Küster H, Pühler A, Aguilar OM (2008)
MOLECULAR PLANT-MICROBE INTERACTIONS 21(4): 459-468.
PUB | DOI | WoS | PubMed | Europe PMC
 
[364]
2008 | Journal Article | PUB-ID: 1631126 PUB | DOI | WoS | PubMed | Europe PMC
 
[363]
2008 | Journal Article | PUB-ID: 1586009
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor
Krause L, Diaz NN, Edwards RA, Gartemann K-H, Krömeke H, Neuweger H, Pühler A, Runte KJ, Schlüter A, Stoye J, Szczepanowski R, et al. (2008)
JOURNAL OF BIOTECHNOLOGY 136(1-2): 91-101.
PUB | DOI | WoS | PubMed | Europe PMC
 
[362]
2008 | Journal Article | PUB-ID: 1586869
Identification of Xanthomonas campestris pv. campestris galactose utilization genes from transcriptome data
Serrania J, Vorhölter F-J, Niehaus K, Pühler A, Becker A (2008)
Journal of Biotechnology 135(3): 309-317.
PUB | DOI | WoS | PubMed | Europe PMC
 
[361]
2008 | Journal Article | PUB-ID: 1585956
Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11
Stiens M, Becker A, Bekel T, Gödde V, Goesmann A, Niehaus K, Schneiker-Bekel S, Selbitschka W, Weidner S, Schlüter A, Pühler A (2008)
Journal of Biotechnology 136(1-2): 31-37.
PUB | DOI | WoS | PubMed | Europe PMC
 
[360]
2008 | Journal Article | PUB-ID: 1592024
The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis
Vorhölter F-J, Schneiker-Bekel S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Rückert C, Schmid J, Sidhu VK, et al. (2008)
Journal of Biotechnology 134(1-2): 33-45.
PUB | DOI | WoS | PubMed | Europe PMC
 
[359]
2008 | Journal Article | PUB-ID: 1585918
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker-Bekel S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Goetker S, et al. (2008)
Journal of Biotechnology 136(1-2): 11-21.
PUB | DOI | WoS | PubMed | Europe PMC
 
[358]
2008 | Journal Article | PUB-ID: 1585939
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehöver P, Gartemann K-H, Arnold W, Blom J, Brinkrolf K, Brune I, Goetker S, et al. (2008)
Journal of Biotechnology 136(1-2): 22-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[357]
2008 | Journal Article | PUB-ID: 1592345
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity
Gartemann K-H, Abt B, Bekel T, Burger A, Engemann J, Fluegel M, Gaigalat L, Goesmann A, Graefen I, Kalinowski J, Kaup O, et al. (2008)
JOURNAL OF BACTERIOLOGY 190(6): 2138-2149.
PUB | DOI | WoS | PubMed | Europe PMC
 
[356]
2008 | Journal Article | PUB-ID: 1783292
The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae
Gross R, Guzman CA, Sebaihia M, Martins dos Santos VAP, Pieper DH, Koebnik R, Lechner M, Bartels D, Buhrmester J, Choudhuri JV, Ebensen T, et al. (2008)
BMC Genomics 9(1): 449.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[355]
2008 | Journal Article | PUB-ID: 1585560 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[354]
2008 | Journal Article | PUB-ID: 1585969
Insight into the plasmid metagenome of wastewater treatment plant bacteria showing reduced susceptibility to antimicrobial drugs analysed by the 454-pyrosequencing technology
Szczepanowski R, Bekel T, Goesmann A, Krause L, Kroemeke H, Kaiser O, Eichler W, Pühler A, Schlueter A (2008)
JOURNAL OF BIOTECHNOLOGY 136(1-2): 54-64.
PUB | DOI | WoS | PubMed | Europe PMC
 
[353]
2008 | Journal Article | PUB-ID: 1990198
Bacteriophage 2851 is a prototype phage for dissemination of the Shiga toxin variant gene 2c in Escherichia coli O157:H7
Strauch E, Hammerl JA, Konietzny A, Schneiker-Bekel S, Arnold W, Goesmann A, Pühler A, Beutin L (2008)
Infection and Immunity 76(12): 5466-5477.
PUB | DOI | WoS | PubMed | Europe PMC
 
[352]
2008 | Journal Article | PUB-ID: 1585980
Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant
Schlueter A, Krause L, Szczepanowski R, Goesmann A, Pühler A (2008)
Journal of Biotechnology 136(1-2): 65-76.
PUB | DOI | WoS | PubMed | Europe PMC
 
[351]
2008 | Journal Article | PUB-ID: 1588078
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences
Brinkrolf K, Ploeger S, Solle S, Brune I, Nentwich SS, Hueser AT, Kalinowski J, Pühler A, Tauch A (2008)
MICROBIOLOGY 154(4): 1068-1081.
PUB | DOI | WoS | PubMed | Europe PMC
 
[350]
2008 | Journal Article | PUB-ID: 1586719 PUB | DOI | WoS | PubMed | Europe PMC
 
[349]
2008 | Journal Article | PUB-ID: 1592210 PUB | DOI | WoS | PubMed | Europe PMC
 
[348]
2008 | Journal Article | PUB-ID: 1585914
Genome research in the light of ultrafast sequencing technologies
Pühler A, Selbitschka W (2008)
JOURNAL OF BIOTECHNOLOGY 136(1-2): 1-2.
PUB | DOI | WoS | PubMed | Europe PMC
 
[347]
2007 | Book Chapter | PUB-ID: 2914794
Molecular Detection with Magnetic Labels and Magnetoresistive Sensors
Schotter J, Panhorst M, Brzeska M, Kamp P-B, Becker A, Pühler A, Reiss G, Brückl H (2007)
In: Nanoscale Devices - Fundamentals and Applications. Gross R, Sidorenko A, Tagirov L (Eds); NATO Science Series, 233. Dordrecht: Springer Netherlands: 35-46.
PUB | DOI
 
[346]
2007 | Journal Article | PUB-ID: 1631327
Complete genome sequence of the myxobacterium Sorangium cellulosum
Schneiker-Bekel S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer MO, Bartels D, Bekel T, Beyer S, Bode E, Bode HB, et al. (2007)
Nature Biotechnology 25(11): 1281-1289.
PUB | DOI | WoS | PubMed | Europe PMC
 
[345]
2007 | Journal Article | PUB-ID: 1946125
IncP-1-beta plasmid pGNB1 isolated from a bacterial community from a wastewater treatment plant mediates decolorization of triphenylmethane dyes
Schlüter A, Krahn I, Kollin F, Bonemann G, Stiens M, Szczepanowski R, Schneiker-Bekel S, Pühler A (2007)
Appl Environ Microbiol 73(20): 6345-6350.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[344]
2007 | Journal Article | PUB-ID: 1594426
A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411
Hansmeier N, Chao T-C, Daschkey S, Muesken M, Kalinowski J, Pühler A, Tauch A (2007)
PROTEOMICS 7(7): 1076-1096.
PUB | DOI | WoS | PubMed | Europe PMC
 
[343]
2007 | Journal Article | PUB-ID: 1595014 PUB | DOI | WoS | PubMed | Europe PMC
 
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2007 | Journal Article | PUB-ID: 1593371
The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes
Nakunst D, Larisch C, Hueser AT, Tauch A, Pühler A, Kalinowski J (2007)
JOURNAL OF BACTERIOLOGY 189(13): 4696-4707.
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2007 | Journal Article | PUB-ID: 1593538 PUB | DOI | WoS | PubMed | Europe PMC
 
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2007 | Journal Article | PUB-ID: 1593746 PUB | DOI | WoS | PubMed | Europe PMC
 
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2007 | Journal Article | PUB-ID: 1894739
Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses
Küster H, Becker A, Firnhaber C, Hohnjec N, Manthey K, Perlick AM, Bekel T, Dondrup M, Henckel K, Goesmann A, Meyer F, et al. (2007)
Phytochemistry 68(1): 19-32.
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2007 | Journal Article | PUB-ID: 1595908
Novel macrolide resistance module carried by the IncP-1 beta resistance plasmid pRSB111, isolated from a wastewater treatment plant
Szczepanowski R, Krahn I, Bohn N, Pühler A, Schlueter A (2007)
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 51(2): 673-678.
PUB | DOI | WoS | PubMed | Europe PMC
 
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2007 | Journal Article | PUB-ID: 1783345
GISMO - gene identification using a support vector machine for ORF classification
Krause L, McHardy AC, Nattkemper TW, Pühler A, Stoye J, Meyer F (2007)
Nucleic Acids Research 35(2): 540-549.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
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2007 | Journal Article | PUB-ID: 1596137
Identification and characterization of a nodH ortholog from the alfalfa-nodulating Or191-like rhizobia
Del Papa MF, Pistorio M, Draghi WO, Lozano MJ, Giusti MA, Medina C, van Dillewijn P, Martinez-Abarca F, Flores BM, Ruiz-Sainz JE, Megias M, et al. (2007)
Molecular Plant - Microbe Interactions 20(2): 138-145.
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2007 | Journal Article | PUB-ID: 1594087
The Ic1R-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum
Brune I, Jochmann N, Brinkrolf K, Hueser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Pühler A, Tauch A (2007)
JOURNAL OF BACTERIOLOGY 189(7): 2720-2733.
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2007 | Journal Article | PUB-ID: 1783754
CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data
Neuweger H, Baumbach J, Albaum S, Bekel T, Dondrup M, Hüser AT, Kalinowski J, Oehm S, Pühler A, Rahmann S, Weile J, et al. (2007)
BMC Systems Biology 1(1): 55.
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2007 | Journal Article | PUB-ID: 1783727
The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in Corynebacterium glutamicum
Gaigalat L, Schlüter J-P, Hartmann M, Mormann S, Tauch A, Pühler A, Kalinowski J (2007)
BMC Molecular Biology 8(1): 104.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
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2007 | Journal Article | PUB-ID: 1593996
Molecular systems biology
Sewald N, Pühler A (2007)
JOURNAL OF BIOTECHNOLOGY 129(2): 171-172.
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2007 | Journal Article | PUB-ID: 1595939
Molecular basics of mycorrhizal symbioses
Pühler A, Strack D (2007)
PHYTOCHEMISTRY 68(1): 6-7.
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2007 | Journal Article | PUB-ID: 1631103
In memoriam: Wolf-Dieter Deckwer - Merging process engineering and systems biology
Rinas U, Pühler A (2007)
JOURNAL OF BIOTECHNOLOGY 132(4): 341.
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2006 | Journal Article | PUB-ID: 1868701
Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System
Tauch A, Trost E, Bekel T, Goesmann A, Ludewig U, Pühler A (2006)
Biochemica 4: 4-6.
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2006 | Journal Article | PUB-ID: 1598182
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis
Schneiker-Bekel S, dos Santos VAPM, Bartels D, Bekel T, Brecht M, Buhrmester J, Chernikova TN, Denaro R, Ferrer M, Gertler C, Goesmann A, et al. (2006)
Nature Biotechnology 24(8): 997-1004.
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2006 | Journal Article | PUB-ID: 1596976
Complete genome of the mutualistic, N-2-fixing grass endophyte Azoarcus sp strain BH72
Krause A, Ramakumar A, Bartels D, Battistoni F, Bekel T, Boch J, Boehm M, Friedrich F, Hurek T, Krause L, Linke B, et al. (2006)
Nature Biotechnology 24(11): 1385-1391.
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2006 | Journal Article | PUB-ID: 1598081
Mobilizable IncQ-related plasmid carrying a new quinolone resistance gene, qnrS2, isolated from the bacterial community of a wastewater treatment plant
Bönemann G, Stiens M, Pühler A, Schlüter A (2006)
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 50(9): 3075-3080.
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