Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester

Maus I, Wibberg D, Stantscheff R, Eikmeyer FG, Seffner A, Boelter J, Szczepanowski R, Blom J, Jaenicke S, König H, Pühler A, et al. (2012)
Journal of Bacteriology 194(19): 5487-5488.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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DOI
Autor*in
Maus, IrenaUniBi; Wibberg, DanielUniBi; Stantscheff, R.; Eikmeyer, Felix GregorUniBi ; Seffner, A.; Boelter, J.; Szczepanowski, RafaelUniBi; Blom, JochenUniBi; Jaenicke, SebastianUniBi; König, H.; Pühler, AlfredUniBi ; Schlüter, AndreasUniBi
Alle
Einrichtung
Technische Fakultät > Computational Genomics
Centrum für Biotechnologie > Arbeitsgruppe A. Pühler
Centrum für Biotechnologie > Graduate Center > Graduate Cluster Industrial Biotechnology
Technische Fakultät > AG Genominformatik
Abstract / Bemerkung
Methanoculleus bourgensis, of the order Methanomicrobiales, is a dominant methanogenic archaeon in many biogas-producing reactor systems fed with renewable primary products. It is capable of synthesizing methane via the hydrogenotrophic pathway utilizing hydrogen and carbon dioxide or formate as the substrates. Here we report the complete and finished genome sequence of M. bourgensis strain MS2(T), isolated from a sewage sludge digester.
Erscheinungsjahr
2012
Zeitschriftentitel
Journal of Bacteriology
Band
194
Ausgabe
19
Seite(n)
5487-5488
ISSN
0021-9193
Page URI
https://pub.uni-bielefeld.de/record/2526298

Zitieren

Maus I, Wibberg D, Stantscheff R, et al. Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology. 2012;194(19):5487-5488.
Maus, I., Wibberg, D., Stantscheff, R., Eikmeyer, F. G., Seffner, A., Boelter, J., Szczepanowski, R., et al. (2012). Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology, 194(19), 5487-5488. doi:10.1128/JB.01292-12
Maus, Irena, Wibberg, Daniel, Stantscheff, R., Eikmeyer, Felix Gregor, Seffner, A., Boelter, J., Szczepanowski, Rafael, et al. 2012. “Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester”. Journal of Bacteriology 194 (19): 5487-5488.
Maus, I., Wibberg, D., Stantscheff, R., Eikmeyer, F. G., Seffner, A., Boelter, J., Szczepanowski, R., Blom, J., Jaenicke, S., König, H., et al. (2012). Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology 194, 5487-5488.
Maus, I., et al., 2012. Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology, 194(19), p 5487-5488.
I. Maus, et al., “Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester”, Journal of Bacteriology, vol. 194, 2012, pp. 5487-5488.
Maus, I., Wibberg, D., Stantscheff, R., Eikmeyer, F.G., Seffner, A., Boelter, J., Szczepanowski, R., Blom, J., Jaenicke, S., König, H., Pühler, A., Schlüter, A.: Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology. 194, 5487-5488 (2012).
Maus, Irena, Wibberg, Daniel, Stantscheff, R., Eikmeyer, Felix Gregor, Seffner, A., Boelter, J., Szczepanowski, Rafael, Blom, Jochen, Jaenicke, Sebastian, König, H., Pühler, Alfred, and Schlüter, Andreas. “Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester”. Journal of Bacteriology 194.19 (2012): 5487-5488.

17 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Biogas Production from Distilled Grain Waste by Thermophilic Dry Anaerobic Digestion: Pretreatment of Feedstock and Dynamics of Microbial Community.
Wang TT, Sun ZY, Huang YL, Tan L, Tang YQ, Kida K., Appl Biochem Biotechnol 184(2), 2018
PMID: 28840458
Microbiome dynamics and adaptation of expression signatures during methane production failure and process recovery.
Grohmann A, Fehrmann S, Vainshtein Y, Haag NL, Wiese F, Stevens P, Naegele HJ, Oechsner H, Hartsch T, Sohn K, Grumaz C., Bioresour Technol 247(), 2018
PMID: 28954247
Non-autotrophic methanogens dominate in anaerobic digesters.
Kouzuma A, Tsutsumi M, Ishii S, Ueno Y, Abe T, Watanabe K., Sci Rep 7(1), 2017
PMID: 28473726
Draft Genome Sequences of Methanoculleus horonobensis Strain JCM 15517, Methanoculleus thermophilus Strain DSM 2373, and Methanofollis ethanolicus Strain JCM 15103, Hydrogenotrophic Methanogens Belonging to the Family Methanomicrobiaceae.
Narihiro T, Kusada H, Yoneda Y, Tamaki H., Genome Announc 4(2), 2016
PMID: 27034500
Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green Microalga Botryococcus braunii Race B (Showa).
Blifernez-Klassen O, Wibberg D, Winkler A, Blom J, Goesmann A, Kalinowski J, Kruse O., Genome Announc 4(3), 2016
PMID: 27284138
Complete Genome Sequence of the Methanogen Methanoculleus bourgensis BA1 Isolated from a Biogas Reactor.
Maus I, Wibberg D, Winkler A, Pühler A, Schnürer A, Schlüter A., Genome Announc 4(3), 2016
PMID: 27340059
Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor.
Hahnke S, Maus I, Wibberg D, Tomazetto G, Pühler A, Klocke M, Schlüter A., J Biotechnol 193(), 2015
PMID: 25444871
Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants.
Maus I, Wibberg D, Stantscheff R, Stolze Y, Blom J, Eikmeyer FG, Fracowiak J, König H, Pühler A, Schlüter A., J Biotechnol 201(), 2015
PMID: 25455016
Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions.
Stolze Y, Zakrzewski M, Maus I, Eikmeyer F, Jaenicke S, Rottmann N, Siebner C, Pühler A, Schlüter A., Biotechnol Biofuels 8(), 2015
PMID: 25688290
Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase Gene blaNDM-1.
Krahn T, Wibberg D, Maus I, Winkler A, Nordmann P, Pühler A, Poirel L, Schlüter A., Genome Announc 3(5), 2015
PMID: 26358593
Primer evaluation and adaption for cost-efficient SYBR Green-based qPCR and its applicability for specific quantification of methanogens.
Reitschuler C, Lins P, Illmer P., World J Microbiol Biotechnol 30(1), 2014
PMID: 23918633
Immunostimulatory CpG motifs in the genomes of gut bacteria and their role in human health and disease.
Kant R, de Vos WM, Palva A, Satokari R., J Med Microbiol 63(pt 2), 2014
PMID: 24255136
Primer evaluation and adaption for cost-efficient SYBR Green-based qPCR and its applicability for specific quantification of methanogens
Reitschuler C, Lins P, Illmer P., World J Microbiol Biotechnol 30(1), 2014
PMID: IND500715659
Isolation and differentiation of methanogenic Archaea from mesophilic corn-fed on-farm biogas plants with special emphasis on the genus Methanobacterium.
Stantscheff R, Kuever J, Rabenstein A, Seyfarth K, Dröge S, König H., Appl Microbiol Biotechnol 98(12), 2014
PMID: 24639207
Complete genome sequence of Peptoniphilus sp. strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation.
Tomazetto G, Hahnke S, Maus I, Wibberg D, Pühler A, Schlüter A, Klocke M., J Biotechnol 192 Pt A(), 2014
PMID: 25242663
Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MF(T.).
Maus I, Stantscheff R, Wibberg D, Stolze Y, Winkler A, Pühler A, König H, Schlüter A., J Biotechnol 192 Pt A(), 2014
PMID: 25270020
Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant.
Maus I, Wibberg D, Stantscheff R, Cibis K, Eikmeyer FG, König H, Pühler A, Schlüter A., J Biotechnol 168(4), 2013
PMID: 24184088

20 References

Daten bereitgestellt von Europe PubMed Central.

Complete genome sequence of Methanoculleus marisnigri Romesser et al. 1981 type strain JR1.
Anderson IJ, Sieprawska-Lupa M, Lapidus A, Nolan M, Copeland A, Glavina Del Rio T, Tice H, Dalin E, Barry K, Saunders E, Han C, Brettin T, Detter JC, Bruce D, Mikhailova N, Pitluck S, Hauser L, Land M, Lucas S, Richardson P, Whitman WB, Kyrpides NC., Stand Genomic Sci 1(2), 2009
PMID: 21304656
Methanoculleus bourgensis, Methanoculleus olentangyi and Methanoculleus oldenburgensis are subjective synonyms.
Asakawa S, Nagaoka K., Int. J. Syst. Evol. Microbiol. 53(Pt 5), 2003
PMID: 13130046
The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution.
Eikmeyer F, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CJ, Top EM, Puhler A, Schluter A., Plasmid 68(1), 2012
PMID: 22326849
Impact of trace element addition on biogas production from food industrial waste--linking process to microbial communities.
Feng XM, Karlsson A, Svensson BH, Bertilsson S., FEMS Microbiol. Ecol. 74(1), 2010
PMID: 20633047
Effect of biowaste sludge maturation on the diversity of thermophilic bacteria and archaea in an anaerobic reactor.
Goberna M, Insam H, Franke-Whittle IH., Appl. Environ. Microbiol. 75(8), 2009
PMID: 19218417
Insights into the completely annotated genome of CD034, a strain isolated from stable grass silage
Heinl S., 2012
Comparative and joint analysis of two metagenomic datasets from a biogas fermenter obtained by 454-pyrosequencing.
Jaenicke S, Ander C, Bekel T, Bisdorf R, Droge M, Gartemann KH, Junemann S, Kaiser O, Krause L, Tille F, Zakrzewski M, Puhler A, Schluter A, Goesmann A., PLoS ONE 6(1), 2011
PMID: 21297863
Analysis of the metagenome from a biogas-producing microbial community by means of bioinformatics methods
Jaenicke S., 2011
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor.
Krause L, Diaz NN, Edwards RA, Gartemann KH, Kromeke H, Neuweger H, Puhler A, Runte KJ, Schluter A, Stoye J, Szczepanowski R, Tauch A, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18611419
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing.
Krober M, Bekel T, Diaz NN, Goesmann A, Jaenicke S, Krause L, Miller D, Runte KJ, Viehover P, Puhler A, Schluter A., J. Biotechnol. 142(1), 2009
PMID: 19480946
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Isolation and characterization of . sp. nov
Ollivier BM, Mah RA, Garcia JL, Boone DR., 1986
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing.
Rademacher A, Zakrzewski M, Schluter A, Schonberg M, Szczepanowski R, Goesmann A, Puhler A, Klocke M., FEMS Microbiol. Ecol. 79(3), 2011
PMID: 22126587
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology.
Schluter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann KH, Krahn I, Krause L, Kromeke H, Kruse O, Mussgnug JH, Neuweger H, Niehaus K, Puhler A, Runte KJ, Szczepanowski R, Tauch A, Tilker A, Viehover P, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18597880
The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.
Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorholter FJ, Weidner S, Goesmann A, Puhler A, Schluter A., J. Biotechnol. 155(1), 2011
PMID: 21396969
Mesophilic syntrophic acetate oxidation during methane formation in biogas reactors
Schnürer A, Zellner G, Svensson BH., 1999
Investigation of factors influencing biogas production in a large-scale thermophilic municipal biogas plant.
Weiss A, Jerome V, Burghardt D, Likke L, Peiffer S, Hofstetter EM, Gabler R, Freitag R., Appl. Microbiol. Biotechnol. 84(5), 2009
PMID: 19618178
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.
Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A, Setubal JC, Schmitt R, Puhler A, Schluter A., J. Biotechnol. 155(1), 2011
PMID: 21329740
Characterization of a biogas-producing microbial community by short-read next generation DNA sequencing.
Wirth R, Kovacs E, Maroti G, Bagi Z, Rakhely G, Kovacs KL., Biotechnol Biofuels 5(), 2012
PMID: 22673110
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing.
Zakrzewski M, Goesmann A, Jaenicke S, Junemann S, Eikmeyer F, Szczepanowski R, Al-Soud WA, Sorensen S, Puhler A, Schluter A., J. Biotechnol. 158(4), 2012
PMID: 22342600
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