First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant
Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Liebl W, Schlüter A (2014)
Journal of Biotechnology 192: 154-155.
Zeitschriftenaufsatz
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Autor*in
Koeck, Daniela E.;
Wibberg, DanielUniBi;
Maus, IrenaUniBi;
Winkler, Anika;
Albersmeier, AndreasUniBi;
Zverlov, Vladimir V.;
Pühler, AlfredUniBi 
;
Schwarz, Wolfgang H.;
Liebl, Wolfgang;
Schlüter, AndreasUniBi
;
Schwarz, Wolfgang H.;
Liebl, Wolfgang;
Schlüter, AndreasUniBi Einrichtung
Abstract / Bemerkung
The moderately thermophilic, anaerobic bacterium Bacillus thermoamylovorans 1A1 (DSM 29353) was isolated from a biogas plant in Germany. It is able to grow efficiently on various carbohydrates such as starch, pectin or xylan. The draft genome sequence of B. thermoamylovorans 1A1 was established and provides the genetic basis for application of this microorganism in degradation of plant biomass. (C) 2014 Elsevier B.V. All rights reserved.
Stichworte
Glycoside hydrolases;
Cellobiose;
Thermophilic biogas plant;
Renewable primary products;
Carbohydrate fermentation
Erscheinungsjahr
2014
Zeitschriftentitel
Journal of Biotechnology
Band
192
Seite(n)
154-155
ISSN
0168-1656
Page URI
https://pub.uni-bielefeld.de/record/2717558
Zitieren
Koeck DE, Wibberg D, Maus I, et al. First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant. Journal of Biotechnology. 2014;192:154-155.
Koeck, D. E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V. V., Pühler, A., et al. (2014). First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant. Journal of Biotechnology, 192, 154-155. doi:10.1016/j.jbiotec.2014.09.017
Koeck, Daniela E., Wibberg, Daniel, Maus, Irena, Winkler, Anika, Albersmeier, Andreas, Zverlov, Vladimir V., Pühler, Alfred, Schwarz, Wolfgang H., Liebl, Wolfgang, and Schlüter, Andreas. 2014. “First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant”. Journal of Biotechnology 192: 154-155.
Koeck, D. E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V. V., Pühler, A., Schwarz, W. H., Liebl, W., and Schlüter, A. (2014). First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant. Journal of Biotechnology 192, 154-155.
Koeck, D.E., et al., 2014. First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant. Journal of Biotechnology, 192, p 154-155.
D.E. Koeck, et al., “First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant”, Journal of Biotechnology, vol. 192, 2014, pp. 154-155.
Koeck, D.E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V.V., Pühler, A., Schwarz, W.H., Liebl, W., Schlüter, A.: First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant. Journal of Biotechnology. 192, 154-155 (2014).
Koeck, Daniela E., Wibberg, Daniel, Maus, Irena, Winkler, Anika, Albersmeier, Andreas, Zverlov, Vladimir V., Pühler, Alfred, Schwarz, Wolfgang H., Liebl, Wolfgang, and Schlüter, Andreas. “First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant”. Journal of Biotechnology 192 (2014): 154-155.
5 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
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PMID: 28011128
Bohn J, Yüksel-Dadak A, Dröge S, König H., J Biotechnol 244(), 2017
PMID: 28011128
Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.
Maus I, Bremges A, Stolze Y, Hahnke S, Cibis KG, Koeck DE, Kim YS, Kreubel J, Hassa J, Wibberg D, Weimann A, Off S, Stantscheff R, Zverlov VV, Schwarz WH, König H, Liebl W, Scherer P, McHardy AC, Sczyrba A, Klocke M, Pühler A, Schlüter A., Biotechnol Biofuels 10(), 2017
PMID: 29158776
Maus I, Bremges A, Stolze Y, Hahnke S, Cibis KG, Koeck DE, Kim YS, Kreubel J, Hassa J, Wibberg D, Weimann A, Off S, Stantscheff R, Zverlov VV, Schwarz WH, König H, Liebl W, Scherer P, McHardy AC, Sczyrba A, Klocke M, Pühler A, Schlüter A., Biotechnol Biofuels 10(), 2017
PMID: 29158776
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Hahnke S, Maus I, Wibberg D, Tomazetto G, Pühler A, Klocke M, Schlüter A., J Biotechnol 193(), 2015
PMID: 25444871
Hahnke S, Maus I, Wibberg D, Tomazetto G, Pühler A, Klocke M, Schlüter A., J Biotechnol 193(), 2015
PMID: 25444871
Draft Genome Sequences of Four Bacillus thermoamylovorans Strains Isolated from Milk and Acacia Gum, a Food Ingredient.
Krawczyk AO, Berendsen EM, Eijlander RT, de Jong A, Wells-Bennik MH, Kuipers OP., Genome Announc 3(2), 2015
PMID: 25814599
Krawczyk AO, Berendsen EM, Eijlander RT, de Jong A, Wells-Bennik MH, Kuipers OP., Genome Announc 3(2), 2015
PMID: 25814599
Bacillus thermoamylovorans Spores with Very-High-Level Heat Resistance Germinate Poorly in Rich Medium despite the Presence of ger Clusters but Efficiently upon Exposure to Calcium-Dipicolinic Acid.
Berendsen EM, Krawczyk AO, Klaus V, de Jong A, Boekhorst J, Eijlander RT, Kuipers OP, Wells-Bennik MH., Appl Environ Microbiol 81(22), 2015
PMID: 26341201
Berendsen EM, Krawczyk AO, Klaus V, de Jong A, Boekhorst J, Eijlander RT, Kuipers OP, Wells-Bennik MH., Appl Environ Microbiol 81(22), 2015
PMID: 26341201
11 References
Daten bereitgestellt von Europe PubMed Central.
Bacillus thermolactis sp. nov., isolated from dairy farms, and emended description of Bacillus thermoamylovorans.
Coorevits A, Logan NA, Dinsdale AE, Halket G, Scheldeman P, Heyndrickx M, Schumann P, Van Landschoot A, De Vos P., Int. J. Syst. Evol. Microbiol. 61(Pt 8), 2010
PMID: 20833876
Coorevits A, Logan NA, Dinsdale AE, Halket G, Scheldeman P, Heyndrickx M, Schumann P, Van Landschoot A, De Vos P., Int. J. Syst. Evol. Microbiol. 61(Pt 8), 2010
PMID: 20833876
Cultivation of anaerobic and facultatively anaerobic bacteria from spacecraft-associated clean rooms.
Stieglmeier M, Wirth R, Kminek G, Moissl-Eichinger C., Appl. Environ. Microbiol. 75(11), 2009
PMID: 19363082
Stieglmeier M, Wirth R, Kminek G, Moissl-Eichinger C., Appl. Environ. Microbiol. 75(11), 2009
PMID: 19363082
Biogenic hydrogen and methane production from Chlorella vulgaris and Dunaliella tertiolecta biomass.
Lakaniemi AM, Hulatt CJ, Thomas DN, Tuovinen OH, Puhakka JA., Biotechnol Biofuels 4(1), 2011
PMID: 21943287
Lakaniemi AM, Hulatt CJ, Thomas DN, Tuovinen OH, Puhakka JA., Biotechnol Biofuels 4(1), 2011
PMID: 21943287
Intensive aerobic bioconversion of sewage sludge and food waste into fertiliser
Wang, Waste Manage. Res. 21(), 2003
Wang, Waste Manage. Res. 21(), 2003
Bacillus thermoamylovorans sp. nov., a moderately thermophilic and amylolytic bacterium.
Combet-Blanc Y, Ollivier B, Streicher C, Patel BK, Dwivedi PP, Pot B, Prensier G, Garcia JL., Int. J. Syst. Bacteriol. 45(1), 1995
PMID: 7857812
Combet-Blanc Y, Ollivier B, Streicher C, Patel BK, Dwivedi PP, Pot B, Prensier G, Garcia JL., Int. J. Syst. Bacteriol. 45(1), 1995
PMID: 7857812
Chemically Defined Minimal Medium for Growth of the Anaerobic Cellulolytic Thermophile Clostridium thermocellum.
Johnson EA, Madia A, Demain AL., Appl. Environ. Microbiol. 41(4), 1981
PMID: 16345748
Johnson EA, Madia A, Demain AL., Appl. Environ. Microbiol. 41(4), 1981
PMID: 16345748
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor.
Krause L, Diaz NN, Edwards RA, Gartemann KH, Kromeke H, Neuweger H, Puhler A, Runte KJ, Schluter A, Stoye J, Szczepanowski R, Tauch A, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18611419
Krause L, Diaz NN, Edwards RA, Gartemann KH, Kromeke H, Neuweger H, Puhler A, Runte KJ, Schluter A, Stoye J, Szczepanowski R, Tauch A, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18611419
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology.
Schluter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann KH, Krahn I, Krause L, Kromeke H, Kruse O, Mussgnug JH, Neuweger H, Niehaus K, Puhler A, Runte KJ, Szczepanowski R, Tauch A, Tilker A, Viehover P, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18597880
Schluter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann KH, Krahn I, Krause L, Kromeke H, Kruse O, Mussgnug JH, Neuweger H, Niehaus K, Puhler A, Runte KJ, Szczepanowski R, Tauch A, Tilker A, Viehover P, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18597880
Characterization of a biogas-producing microbial community by short-read next generation DNA sequencing.
Wirth R, Kovacs E, Maroti G, Bagi Z, Rakhely G, Kovacs KL., Biotechnol Biofuels 5(), 2012
PMID: 22673110
Wirth R, Kovacs E, Maroti G, Bagi Z, Rakhely G, Kovacs KL., Biotechnol Biofuels 5(), 2012
PMID: 22673110
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
dbCAN: a web resource for automated carbohydrate-active enzyme annotation.
Yin Y, Mao X, Yang J, Chen X, Mao F, Xu Y., Nucleic Acids Res. 40(Web Server issue), 2012
PMID: 22645317
Yin Y, Mao X, Yang J, Chen X, Mao F, Xu Y., Nucleic Acids Res. 40(Web Server issue), 2012
PMID: 22645317
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