Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum

Tauch A, Zheng ZX, Pühler A, Kalinowski J (1998)
Plasmid 40(2): 126-139.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Tauch, AndreasUniBi; Zheng, ZX; Pühler, AlfredUniBi ; Kalinowski, JörnUniBi
Einrichtung
Centrum für Biotechnologie
Fakultät für Biologie
Abstract / Bemerkung
The clinical isolate Corynebacterium striatum M82B (formerly Corynebacterium xerosis M82B) carries the 50-kb R-plasmid pTP10 conferring resistance to the antibiotics chloramphenicol, erythromycin, kanamycin, and tetracycline. DNA sequence analysis of the chloramphenicol resistance region revealed the presence of the 4155-bp transposable element Tn5564. The ends of Tn5564 are identical 22-bp inverted repeats flanked by a 6-bp target site duplication. The central region of Tn5564 encodes the chloramphenicol resistance gene cmx, specifying a transmembrane chloramphenicol efflux protein, and an open reading frame homologous to transposases of insertion sequences identified in Arthrobacter nicotinovorans and Bordetella pertussis. Furthermore, the 1715-bp insertion sequence IS1513 encoding a putative transposase of the IS30 family is an integral part of Tn5564 and is located upstream of cmx For transposon mutagenesis, Tn5564 was transferred to Corynebacterium glutamicum on a mobilizable Escherichia coli plasmid using RP4-mediated intergeneric conjugation. Transposition of Tn5564 in C. glutamicum occurred with a frequency of 3.3 X 10(-8) and resulted in an insertion into target sites containing the central palindromic tetranucleotide CTAG. A Tn5564-induced mutant strain of C. glutamicum was found to carry the transposon in the ftsZ gene region. (C) 1998 Academic Press.
Erscheinungsjahr
1998
Zeitschriftentitel
Plasmid
Band
40
Ausgabe
2
Seite(n)
126-139
ISSN
0147-619X
Page URI
https://pub.uni-bielefeld.de/record/1624721

Zitieren

Tauch A, Zheng ZX, Pühler A, Kalinowski J. Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum. Plasmid. 1998;40(2):126-139.
Tauch, A., Zheng, Z. X., Pühler, A., & Kalinowski, J. (1998). Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum. Plasmid, 40(2), 126-139. https://doi.org/10.1006/plas.1998.1362
Tauch, Andreas, Zheng, ZX, Pühler, Alfred, and Kalinowski, Jörn. 1998. “Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum”. Plasmid 40 (2): 126-139.
Tauch, A., Zheng, Z. X., Pühler, A., and Kalinowski, J. (1998). Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum. Plasmid 40, 126-139.
Tauch, A., et al., 1998. Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum. Plasmid, 40(2), p 126-139.
A. Tauch, et al., “Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum”, Plasmid, vol. 40, 1998, pp. 126-139.
Tauch, A., Zheng, Z.X., Pühler, A., Kalinowski, J.: Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum. Plasmid. 40, 126-139 (1998).
Tauch, Andreas, Zheng, ZX, Pühler, Alfred, and Kalinowski, Jörn. “Corynebacterium striatum chloramphenicol resistance transposon Tn5564: Genetic organization and transposition in Corynebacterium glutamicum”. Plasmid 40.2 (1998): 126-139.

36 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Comparative genomics of 16 Microbacterium spp. that tolerate multiple heavy metals and antibiotics.
Learman DR, Ahmad Z, Brookshier A, Henson MW, Hewitt V, Lis A, Morrison C, Robinson A, Todaro E, Wologo E, Wynne S, Alm EW, Kourtev PS., PeerJ 6(), 2019
PMID: 30671291
Virulence Characteristics and an Action Mode of Antibiotic Resistance in Multidrug-Resistant Pseudomonas aeruginosa.
Hwang W, Yoon SS., Sci Rep 9(1), 2019
PMID: 30679735
Dissemination of antibiotic resistance genes from antibiotic producers to pathogens.
Jiang X, Ellabaan MMH, Charusanti P, Munck C, Blin K, Tong Y, Weber T, Sommer MOA, Lee SY., Nat Commun 8(), 2017
PMID: 28589945
Genomic Analysis of Clavibacter michiganensis Reveals Insight Into Virulence Strategies and Genetic Diversity of a Gram-Positive Bacterial Pathogen.
Thapa SP, Pattathil S, Hahn MG, Jacques MA, Gilbertson RL, Coaker G., Mol Plant Microbe Interact 30(10), 2017
PMID: 28677494
Zinc-Induced Transposition of Insertion Sequence Elements Contributes to Increased Adaptability of Cupriavidus metallidurans.
Vandecraen J, Monsieurs P, Mergeay M, Leys N, Aertsen A, Van Houdt R., Front Microbiol 7(), 2016
PMID: 27047473
In Azospirillum brasilense, mutations in flmA or flmB genes affect polar flagellum assembly, surface polysaccharides, and attachment to maize roots.
Rossi FA, Medeot DB, Liaudat JP, Pistorio M, Jofré E., Microbiol Res 190(), 2016
PMID: 27393999
Clavibacter michiganensis subsp. michiganensis Vatr1 and Vatr2 Transcriptional Regulators Are Required for Virulence in Tomato.
Savidor A, Chalupowicz L, Teper D, Gartemann KH, Eichenlaub R, Manulis-Sasson S, Barash I, Sessa G., Mol Plant Microbe Interact 2015(1), 2015
PMID: 27839071
Classification of phenotypic subpopulations in isogenic bacterial cultures by triple promoter probing at single cell level.
Schlüter JP, Czuppon P, Schauer O, Pfaffelhuber P, McIntosh M, Becker A., J Biotechnol 198(), 2015
PMID: 25661839
Complete Genome Sequence and Annotation of Corynebacterium singulare DSM 44357, Isolated from a Human Semen Specimen.
Merten M, Brinkrolf K, Albersmeier A, Kutter Y, Rückert C, Tauch A., Genome Announc 3(2), 2015
PMID: 25814602
RNase E affects the expression of the acyl-homoserine lactone synthase gene sinI in Sinorhizobium meliloti.
Baumgardt K, Charoenpanich P, McIntosh M, Schikora A, Stein E, Thalmann S, Kogel KH, Klug G, Becker A, Evguenieva-Hackenberg E., J Bacteriol 196(7), 2014
PMID: 24488310
Evidences of autoregulation of hfq expression in Sinorhizobium meliloti strain 2011.
Sobrero P, Valverde C., Arch Microbiol 193(9), 2011
PMID: 21484295
ppGpp in Sinorhizobium meliloti: biosynthesis in response to sudden nutritional downshifts and modulation of the transcriptome.
Krol E, Becker A., Mol Microbiol 81(5), 2011
PMID: 21696469
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing.
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Götker S, Kalinowski J, Kamp PB, Lobo FP, Viehoever P, Weisshaar B, Soriano F, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18367281
Genetic environment of 16S rRNA methylase gene rmtD.
Doi Y, Adams-Haduch JM, Paterson DL., Antimicrob Agents Chemother 52(6), 2008
PMID: 18391044
Characterization of new IS elements and studies of their dispersion in two subspecies of Leifsonia xyli.
Zerillo MM, Van Sluys MA, Camargo LE, Monteiro-Vitorello CB., BMC Microbiol 8(), 2008
PMID: 18655699
Characterization of plasmids from human infant Bifidobacterium strains: sequence analysis and construction of E. coli-Bifidobacterium shuttle vectors.
Shkoporov AN, Efimov BA, Khokhlova EV, Steele JL, Kafarskaia LI, Smeianov VV., Plasmid 60(2), 2008
PMID: 18652842
A family of serine proteases of Clavibacter michiganensis subsp. michiganensis: chpC plays a role in colonization of the host plant tomato
STORK INES, GARTEMANN KARL-HEINZ, BURGER ANNETTE, EICHENLAUB RUDOLF., Mol Plant Pathol 9(5), 2008
PMID: IND44089689
Characterization of the variants, flanking genes, and promoter activity of the Leifsonia xyli subsp. cynodontis insertion sequence IS1237.
Lin H, Li TY, Xie MH, Zhang Y., J Bacteriol 189(8), 2007
PMID: 17293427
Random mutagenesis in Corynebacterium glutamicum ATCC 13032 using an IS6100-based transposon vector identified the last unknown gene in the histidine biosynthesis pathway.
Mormann S, Lömker A, Rückert C, Gaigalat L, Tauch A, Pühler A, Kalinowski J., BMC Genomics 7(), 2006
PMID: 16901339
Isolation and characterization of a native composite transposon, Tn14751, carrying 17.4 kilobases of Corynebacterium glutamicum chromosomal DNA.
Inui M, Tsuge Y, Suzuki N, Vertès AA, Yukawa H., Appl Environ Microbiol 71(1), 2005
PMID: 15640215
Characterization of PmfR, the transcriptional activator of the pAO1-borne purU-mabO-folD operon of Arthrobacter nicotinovorans.
Chiribau CB, Sandu C, Igloi GL, Brandsch R., J Bacteriol 187(9), 2005
PMID: 15838033
Two new Sinorhizobium meliloti LysR-type transcriptional regulators required for nodulation.
Luo L, Yao SY, Becker A, Rüberg S, Yu GQ, Zhu JB, Cheng HP., J Bacteriol 187(13), 2005
PMID: 15968067
Identification of a tomatinase in the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382.
Kaup O, Gräfen I, Zellermann EM, Eichenlaub R, Gartemann KH., Mol Plant Microbe Interact 18(10), 2005
PMID: 16255248
Manipulating corynebacteria, from individual genes to chromosomes.
Vertès AA, Inui M, Yukawa H., Appl Environ Microbiol 71(12), 2005
PMID: 16332735
Chloromethane-dependent expression of the cmu gene cluster of Hyphomicrobium chloromethanicum.
Borodina E, McDonald IR, Murrell JC., Appl Environ Microbiol 70(7), 2004
PMID: 15240299
Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium.
Tauch A, Bischoff N, Pühler A, Kalinowski J., Plasmid 52(2), 2004
PMID: 15336488
Molecular basis of bacterial resistance to chloramphenicol and florfenicol.
Schwarz S, Kehrenberg C, Doublet B, Cloeckaert A., FEMS Microbiol Rev 28(5), 2004
PMID: 15539072
Sinorhizobium meliloti acpXL mutant lacks the C28 hydroxylated fatty acid moiety of lipid A and does not express a slow migrating form of lipopolysaccharide.
Sharypova LA, Niehaus K, Scheidle H, Holst O, Becker A., J Biol Chem 278(15), 2003
PMID: 12566460
Tools for genetic engineering in the amino acid-producing bacterium Corynebacterium glutamicum.
Kirchner O, Tauch A., J Biotechnol 104(1-3), 2003
PMID: 12948646
Clavibacter michiganensis subsp. michiganensis: first steps in the understanding of virulence of a Gram-positive phytopathogenic bacterium.
Gartemann KH, Kirchner O, Engemann J, Gräfen I, Eichenlaub R, Burger A., J Biotechnol 106(2-3), 2003
PMID: 14651860
The 27.8-kb R-plasmid pTET3 from Corynebacterium glutamicum encodes the aminoglycoside adenyltransferase gene cassette aadA9 and the regulated tetracycline efflux system Tet 33 flanked by active copies of the widespread insertion sequence IS6100.
Tauch A, Götker S, Pühler A, Kalinowski J, Thierbach G., Plasmid 48(2), 2002
PMID: 12383729
Efficient transformation system for Propionibacterium freudenreichii based on a novel vector.
Jore JP, van Luijk N, Luiten RG, van der Werf MJ, Pouwels PH., Appl Environ Microbiol 67(2), 2001
PMID: 11157209
Isolation and characterization of IS1409, an insertion element of 4-chlorobenzoate-degrading Arthrobacter sp. strain TM1, and development of a system for transposon mutagenesis.
Gartemann KH, Eichenlaub R., J Bacteriol 183(12), 2001
PMID: 11371537
A highly efficient transposon mutagenesis system for the tomato pathogen Clavibacter michiganensis subsp. michiganensis.
Kirchner O, Gartemann KH, Zellermann EM, Eichenlaub R, Burger A., Mol Plant Microbe Interact 14(11), 2001
PMID: 11763129
The tetAB genes of the Corynebacterium striatum R-plasmid pTP10 encode an ABC transporter and confer tetracycline, oxytetracycline and oxacillin resistance in Corynebacterium glutamicum.
Tauch A, Krieft S, Pühler A, Kalinowski J., FEMS Microbiol Lett 173(1), 1999
PMID: 10220896
Interactions between Clavibacter michiganensis and its host plants.
Jahr H, Bahro R, Burger A, Ahlemeyer J, Eichenlaub R., Environ Microbiol 1(2), 1999
PMID: 11207726

39 References

Daten bereitgestellt von Europe PubMed Central.

Basic local alignment search tool.
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ., J. Mol. Biol. 215(3), 1990
PMID: 2231712
A physical and genetic map of the Corynebacterium glutamicum ATCC 13032 chromosome.
Bathe B, Kalinowski J, Puhler A., Mol. Gen. Genet. 252(3), 1996
PMID: 8842145
Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes.
Burland V, Plunkett G 3rd, Sofia HJ, Daniels DL, Blattner FR., Nucleic Acids Res. 23(12), 1995
PMID: 7610040
Coryneform bacteria in infectious diseases: clinical and laboratory aspects.
Coyle MB, Lipsky BA., Clin. Microbiol. Rev. 3(3), 1990
PMID: 2116939
The plasmid-encoded chloramphenicol-resistance protein of Rhodococcus fascians is homologous to the transmembrane tetracycline efflux proteins.
Desomer J, Vereecke D, Crespi M, Van Montagu M., Mol. Microbiol. 6(16), 1992
PMID: 1406276
An amplifiable and deletable chloramphenicol-resistance determinant of Streptomyces lividans 1326 encodes a putative transmembrane protein.
Dittrich W, Betzler M, Schrempf H., Mol. Microbiol. 5(11), 1991
PMID: 1779766
Cloning and sequencing of IS1086, an Alcaligenes eutrophus insertion element related to IS30 and IS4351.
Dong Q, Sadouk A, van der Lelie D, Taghavi S, Ferhat A, Nuyten JM, Borremans B, Mergeay M, Toussaint A., J. Bacteriol. 174(24), 1992
PMID: 1334071
Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants.
Grant SG, Jessee J, Bloom FR, Hanahan D., Proc. Natl. Acad. Sci. U.S.A. 87(12), 1990
PMID: 2162051
A Corynebacterium glutamicum gene encoding a two-domain protein similar to biotin carboxylases and biotin-carboxyl-carrier proteins.
Jager W, Peters-Wendisch PG, Kalinowski J, Puhler A., Arch. Microbiol. 166(2), 1996
PMID: 8772169
Compositional biases of bacterial genomes and evolutionary implications.
Karlin S, Mrazek J, Campbell AM., J. Bacteriol. 179(12), 1997
PMID: 9190805
Cloning, sequencing, and characterization of the ftsZ gene from coryneform bacteria.
Kobayashi M, Asai Y, Hatakeyama K, Kijima N, Wachi M, Nagai K, Yukawa H., Biochem. Biophys. Res. Commun. 236(2), 1997
PMID: 9240446
R plasmids in Corynebacterium xerosis strains.
Kono M, Sasatsu M, Aoki T., Antimicrob. Agents Chemother. 23(3), 1983
PMID: 6847177
Polyethylene glycol-mediated bacterial colony transformation.
Kurien BT, Scofield RH., BioTechniques 18(6), 1995
PMID: 7546702
Amino acids: Technical production and use
Leuchtenberger, 1996
Nucleotide sequence and characterization of a repetitive DNA element from the genome of Bordetella pertussis with characteristics of an insertion sequence.
McLafferty MA, Harcus DR, Hewlett EL., J. Gen. Microbiol. 134(8), 1988
PMID: 2908119
IS1473, a putative insertion sequence identified in the plasmid pAO1 from Arthrobacter nicotinovorans: isolation, characterization, and distribution among Arthrobacter species.
Menendez C, Igloi GL, Brandsch R., Plasmid 37(1), 1997
PMID: 9073580
Inactivation of chloramphenicol by O-phosphorylation. A novel resistance mechanism in Streptomyces venezuelae ISP5230, a chloramphenicol producer.
Mosher RH, Camp DJ, Yang K, Brown MP, Shaw WV, Vining LC., J. Biol. Chem. 270(45), 1995
PMID: 7592948
Optimal alignments in linear space.
Myers EW, Miller W., Comput. Appl. Biosci. 4(1), 1988
PMID: 3382986
Mutations in the carboxy-terminal part of IS30 transposase affect the formation and dissolution of (IS30)2 dimer.
Olasz F, Farkas T, Stalder R, Arber W., FEBS Lett. 413(3), 1997
PMID: 9303555
Translational coupling during expression of the tryptophan operon of Escherichia coli.
Oppenheim DS, Yanofsky C., Genetics 95(4), 1980
PMID: 6162715
Improved tools for biological sequence comparison.
Pearson WR, Lipman DJ., Proc. Natl. Acad. Sci. U.S.A. 85(8), 1988
PMID: 3162770
Bacterial transposases and retroviral integrases.
Polard P, Chandler M., Mol. Microbiol. 15(1), 1995
PMID: 7752887
The IS4 family of insertion sequences: evidence for a conserved transposase motif.
Rezsohazy R, Hallet B, Delcour J, Mahillon J., Mol. Microbiol. 9(6), 1993
PMID: 7934941
Proposal ofCorynebacterium propinquumCorynebacterium
Riegel, FEMS Microbiol. Lett. 113(), 1993
Characterization of antibiotic-resistant Corynebacterium striatum strains.
Roberts MC, Leonard RB, Briselden A, Schoenknecht FD, Coyle MB., J. Antimicrob. Chemother. 30(4), 1992
PMID: 1490919
Transmembrane helices predicted at 95% accuracy.
Rost B, Casadio R, Fariselli P, Sander C., Protein Sci. 4(3), 1995
PMID: 7795533

Sambrook, 1989
DNA sequencing with chain-terminating inhibitors.
Sanger F, Nicklen S, Coulson AR., Proc. Natl. Acad. Sci. U.S.A. 74(12), 1977
PMID: 271968
High-frequency conjugal plasmid transfer from gram-negative Escherichia coli to various gram-positive coryneform bacteria.
Schafer A, Kalinowski J, Simon R, Seep-Feldhaus AH, Puhler A., J. Bacteriol. 172(3), 1990
PMID: 2106514
Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum.
Schafer A, Tauch A, Jager W, Kalinowski J, Thierbach G, Puhler A., Gene 145(1), 1994
PMID: 8045426
A broad host range mobilization system forin vivo
Simon, Bio/Technology 1(), 1983
The current status and portability of our sequence handling software.
Staden R., Nucleic Acids Res. 14(1), 1986
PMID: 3511446
The N-terminal domain of the insertion sequence 30 transposase interacts specifically with the terminal inverted repeats of the element.
Stalder R, Caspers P, Olasz F, Arber W., J. Biol. Chem. 265(7), 1990
PMID: 2154486
The erythromycin resistance gene of the Corynebacterium xerosis R-plasmid pTP10 also carrying chloramphenicol, kanamycin, and tetracycline resistances is capable of transposition in Corynebacterium glutamicum.
Tauch A, Kassing F, Kalinowski J, Puhler A., Plasmid 33(3), 1995
PMID: 7568464
The Corynebacterium xerosis composite transposon Tn5432 consists of two identical insertion sequences, designated IS1249, flanking the erythromycin resistance gene ermCX.
Tauch A, Kassing F, Kalinowski J, Puhler A., Plasmid 34(2), 1995
PMID: 8559800
Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli.
Tauch A, Kirchner O, Wehmeier L, Kalinowski J, Puhler A., FEMS Microbiol. Lett. 123(3), 1994
PMID: 7988915
The differentiation of Bordetella parapertussis and Bordetella bronchiseptica from humans and animals as determined by DNA polymorphism mediated by two different insertion sequence elements suggests their phylogenetic relationship.
van der Zee A, Groenendijk H, Peeters M, Mooi FR., Int. J. Syst. Bacteriol. 46(3), 1996
PMID: 8782670
IS1394 from Pseudomonas alcaligenes N.C.I.B. 9867: identification and characterization of a member of the IS30 family of insertion elements.
Yeo CC, Poh CL., Gene 175(1-2), 1996
PMID: 8917085
A simplified protocol for fast plasmid DNA sequencing.
Zimmermann J, Voss H, Schwager C, Stegemann J, Erfle H, Stucky K, Kristensen T, Ansorge W., Nucleic Acids Res. 18(4), 1990
PMID: 2315028
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 9735314
PubMed | Europe PMC

Suchen in

Google Scholar