Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes
Frenzel A, Manthey K, Perlick AM, Meyer F, Pühler A, Küster H, Krajinski F (2005)
Mol Plant-Microbe Interact 18(8): 771-782.
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Autor*in
Frenzel, A.;
Manthey, KatjaUniBi;
Perlick, A. M.;
Meyer, F.;
Pühler, AlfredUniBi ;
Küster, Helge;
Krajinski, F.
Einrichtung
Abstract / Bemerkung
The large majority of plants are capable of undergoing a tight symbiosis with arbuscular mycorrhizal (AM) fungi. During this symbiosis, highly specialized new structures called arbuscules are formed within the host cells, indicating that, during interaction with AM fungi, plants express AM-specific genetic programs. Despite increasing efforts, the number of genes known to be induced in the AM symbiosis is still low. In order to identify novel AM-induced genes which have not been listed before, 5,646 expressed sequence tags (ESTs) were generated from two Medicago truncatula cDNA libraries: a random cDNA library (MtAmp) and a suppression subtractive hybridization (SSH) library (MtGim), the latter being designed to enhance the cloning of mycorrhiza-upregulated genes. In silico expression analysis was applied to identify those tentative consensus sequences (TCs) of The Institute for Genomic Research M. truncatula gene index (MtGI) that are composed exclusively of ESTs deriving from the MtGim or MtAmp library, but not from any other cDNA library of the MtGI. This search revealed 115 MtAmp- or MTGim-specific TCs. For the majority of these TCs with sequence similarities to plant genes, the AM-specific expression was verified by quantitative reverse-transcription polymerase chain reaction. Annotation of the novel genes induced in mycorrhizal roots suggested their involvement in different transport as well as signaling processes and revealed a novel family of AM-specific lectin genes. The expression of reporter gene fusions in transgenic roots revealed an arbuscule-related expression of two members of the lectin gene family, indicating a role for AM-specific lectins during arbuscule formation or functioning.
Stichworte
eNorthern;
expression profiling
Erscheinungsjahr
2005
Zeitschriftentitel
Mol Plant-Microbe Interact
Band
18
Ausgabe
8
Seite(n)
771-782
ISSN
0894-0282
Page URI
https://pub.uni-bielefeld.de/record/1602933
Zitieren
Frenzel A, Manthey K, Perlick AM, et al. Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes. Mol Plant-Microbe Interact. 2005;18(8):771-782.
Frenzel, A., Manthey, K., Perlick, A. M., Meyer, F., Pühler, A., Küster, H., & Krajinski, F. (2005). Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes. Mol Plant-Microbe Interact, 18(8), 771-782. https://doi.org/10.1094/MPM1-18-0771
Frenzel, A., Manthey, Katja, Perlick, A. M., Meyer, F., Pühler, Alfred, Küster, Helge, and Krajinski, F. 2005. “Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes”. Mol Plant-Microbe Interact 18 (8): 771-782.
Frenzel, A., Manthey, K., Perlick, A. M., Meyer, F., Pühler, A., Küster, H., and Krajinski, F. (2005). Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes. Mol Plant-Microbe Interact 18, 771-782.
Frenzel, A., et al., 2005. Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes. Mol Plant-Microbe Interact, 18(8), p 771-782.
A. Frenzel, et al., “Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes”, Mol Plant-Microbe Interact, vol. 18, 2005, pp. 771-782.
Frenzel, A., Manthey, K., Perlick, A.M., Meyer, F., Pühler, A., Küster, H., Krajinski, F.: Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes. Mol Plant-Microbe Interact. 18, 771-782 (2005).
Frenzel, A., Manthey, Katja, Perlick, A. M., Meyer, F., Pühler, Alfred, Küster, Helge, and Krajinski, F. “Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes”. Mol Plant-Microbe Interact 18.8 (2005): 771-782.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
UNIPROT
6 Einträge gefunden, die diesen Artikel zitieren
Legume lectin beta domain protein (UNIPROT: Q2PP73)
Organism: Medicago truncatula
Download in FASTA format
Organism: Medicago truncatula
Download in FASTA format
EMBL
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VandenBosch, PLANT PHYSIOLOGY 131(3), 2003
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Harrison MJ, Dewbre GR, Liu J., Plant Cell 14(10), 2002
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Augé, Mycorrhiza 11(1), 2001
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George, Botany 70(11), 1992
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Mtha1, a Plasma Membrane H+-ATPase Gene fromMedicago truncatula,Shows Arbuscule-Specific Induced Expression in Mycorrhizal Tissue
Krajinski, Plant Biology 4(6), 2002
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Root lectin as a determinant of host–plant specificity in the Rhizobium–legume symbiosis
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A gateway cloning vector set for high-throughput functional analysis of genes in planta.
Curtis MD, Grossniklaus U., Plant Physiol. 133(2), 2003
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JOHANSEN, New Phytologist 122(2), 1992
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A member of the germin-like protein family is a highly conserved mycorrhiza-specific induced gene.
Doll J, Hause B, Demchenko K, Pawlowski K, Krajinski F., Plant Cell Physiol. 44(11), 2003
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PROSITE: a documented database using patterns and profiles as motif descriptors.
Sigrist CJ, Cerutti L, Hulo N, Gattiker A, Falquet L, Pagni M, Bairoch A, Bucher P., Brief. Bioinformatics 3(3), 2002
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MtENOD16 and 20 are members of a family of phytocyanin-related early nodulins.
Greene EA, Erard M, Dedieu A, Barker DG., Plant Mol. Biol. 36(5), 1998
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Plant and bacterial symbiotic mutants define three transcriptionally distinct stages in the development of the Medicago truncatula/Sinorhizobium meliloti symbiosis.
Mitra RM, Long SR., Plant Physiol. 134(2), 2004
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A knowledge base for predicting protein localization sites in eukaryotic cells.
Nakai K, Kanehisa M., Genomics 14(4), 1992
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Colonisation patterns of root tissues byPhytophthora nicotianae var.parasitica related to reduced disease in mycorrhizal tomato
Cordier, Plant and Soil 185(2), 1996
Cordier, Plant and Soil 185(2), 1996
Expression of nitrate transporter genes in tomato colonized by an arbuscular mycorrhizal fungus.
Hildebrandt U, Schmelzer E, Bothe H., Physiol Plant 115(1), 2002
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A phosphate transporter expressed in arbuscule-containing cells in potato.
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Appressorium formation by AM fungi on isolated cell walls of carrot roots.
Nagahashi G, Douds DDJr., New Phytol. 136(2), 1997
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The TIGR gene indices: reconstruction and representation of expressed gene sequences.
Quackenbush J, Liang F, Holt I, Pertea G, Upton J., Nucleic Acids Res. 28(1), 2000
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Quackenbush J, Liang F, Holt I, Pertea G, Upton J., Nucleic Acids Res. 28(1), 2000
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An optimized protocol for analysis of EST sequences.
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The comparison of gene expression from multiple cDNA libraries.
Stekel DJ, Git Y, Falciani F., Genome Res. 10(12), 2000
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Rice phosphate transporters include an evolutionarily divergent gene specifically activated in arbuscular mycorrhizal symbiosis.
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New plant promoter and enhancer testing vectors.
Szabados L, Charrier B, Kondorosi A, Bruijn FJde, Ratet P., Mol. Breed. 1(4), 1995
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Szabados L, Charrier B, Kondorosi A, Bruijn FJde, Ratet P., Mol. Breed. 1(4), 1995
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