The composite genome of the legume symbiont Sinorhizobium meliloti

Galibert F, Finan TM, Long SR, Pühler A, Abola P, Ampe F, Barloy-Hubler F, Barnett MJ, Becker A, Boistard P, Bothe G, et al. (2001)
SCIENCE 293(5530): 668-672.

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Galibert F, Finan TM, Long SR, et al. The composite genome of the legume symbiont Sinorhizobium meliloti. SCIENCE. 2001;293(5530):668-672.
Galibert, F., Finan, T. M., Long, S. R., Pühler, A., Abola, P., Ampe, F., Barloy-Hubler, F., et al. (2001). The composite genome of the legume symbiont Sinorhizobium meliloti. SCIENCE, 293(5530), 668-672. doi:10.1126/science.1060966
Galibert, F., Finan, T. M., Long, S. R., Pühler, A., Abola, P., Ampe, F., Barloy-Hubler, F., Barnett, M. J., Becker, A., Boistard, P., et al. (2001). The composite genome of the legume symbiont Sinorhizobium meliloti. SCIENCE 293, 668-672.
Galibert, F., et al., 2001. The composite genome of the legume symbiont Sinorhizobium meliloti. SCIENCE, 293(5530), p 668-672.
F. Galibert, et al., “The composite genome of the legume symbiont Sinorhizobium meliloti”, SCIENCE, vol. 293, 2001, pp. 668-672.
Galibert, F., Finan, T.M., Long, S.R., Pühler, A., Abola, P., Ampe, F., Barloy-Hubler, F., Barnett, M.J., Becker, A., Boistard, P., Bothe, G., Boutry, M., Bowser, L., Buhrmester, J., Cadieu, E., Capela, D., Chain, P., Cowie, A., Davis, R.W., Dreano, S., Federspiel, N.A., Fisher, R.F., Gloux, S., Godrie, T., Goffeau, A., Golding, B., Gouzy, J., Gurjal, M., Hernandez-Lucas, I., Hong, A., Huizar, L., Hyman, R.W., Jones, T., Kahn, D., Kahn, M.L., Kalman, S., Keating, D.H., Kiss, E., Komp, C., Lalaure, V., Masuy, D., Palm, C., Peck, M.C., Pohl, T.M., Portetelle, D., Purnelle, B., Ramsperger, U., Surzycki, R., Thebault, P., Vandenbol, M., Vorhölter, F.-J., Weidner, S., Wells, D.H., Wong, K., Yeh, K.C., Batut, J.: The composite genome of the legume symbiont Sinorhizobium meliloti. SCIENCE. 293, 668-672 (2001).
Galibert, F, Finan, TM, Long, SR, Pühler, Alfred, Abola, P, Ampe, F, Barloy-Hubler, F, Barnett, MJ, Becker, Anke, Boistard, P, Bothe, G, Boutry, M, Bowser, L, Buhrmester, Jens, Cadieu, E, Capela, D, Chain, P, Cowie, A, Davis, RW, Dreano, S, Federspiel, NA, Fisher, RF, Gloux, S, Godrie, T, Goffeau, A, Golding, B, Gouzy, J, Gurjal, M, Hernandez-Lucas, I, Hong, A, Huizar, L, Hyman, RW, Jones, T, Kahn, D, Kahn, ML, Kalman, S, Keating, DH, Kiss, E, Komp, C, Lalaure, V, Masuy, D, Palm, C, Peck, MC, Pohl, TM, Portetelle, D, Purnelle, B, Ramsperger, U, Surzycki, R, Thebault, P, Vandenbol, M, Vorhölter, Frank-Jörg, Weidner, Stefan, Wells, DH, Wong, K, Yeh, KC, and Batut, J. “The composite genome of the legume symbiont Sinorhizobium meliloti”. SCIENCE 293.5530 (2001): 668-672.

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PMID: 24501121
Genome-wide profiling of Hfq-binding RNAs uncovers extensive post-transcriptional rewiring of major stress response and symbiotic regulons in Sinorhizobium meliloti.
Torres-Quesada O, Reinkensmeier J, Schlüter JP, Robledo M, Peregrina A, Giegerich R, Toro N, Becker A, Jiménez-Zurdo JI., RNA Biol 11(5), 2014
PMID: 24786641
Use of the computer-retargeted group II intron RmInt1 of Sinorhizobium meliloti for gene targeting.
García-Rodríguez FM, Hernández-Gutiérrez T, Díaz-Prado V, Toro N., RNA Biol 11(4), 2014
PMID: 24646865
Growth conditions determine the DNF2 requirement for symbiosis.
Berrabah F, Bourcy M, Cayrel A, Eschstruth A, Mondy S, Ratet P, Gourion B., PLoS One 9(3), 2014
PMID: 24632747
Comparative genomic analysis of N2-fixing and non-N2-fixing Paenibacillus spp.: organization, evolution and expression of the nitrogen fixation genes.
Xie JB, Du Z, Bai L, Tian C, Zhang Y, Xie JY, Wang T, Liu X, Chen X, Cheng Q, Chen S, Li J., PLoS Genet 10(3), 2014
PMID: 24651173
Sinorhizobium meliloti chemoreceptor McpU mediates chemotaxis toward host plant exudates through direct proline sensing.
Webb BA, Hildreth S, Helm RF, Scharf BE., Appl Environ Microbiol 80(11), 2014
PMID: 24657863
Functional diversity of five homologous Cu+-ATPases present in Sinorhizobium meliloti.
Patel SJ, Padilla-Benavides T, Collins JM, Argüello JM., Microbiology 160(pt 6), 2014
PMID: 24662147
Entropy-driven motility of Sinorhizobium meliloti on a semi-solid surface.
Dilanji GE, Teplitski M, Hagen SJ., Proc Biol Sci 281(1784), 2014
PMID: 24741008
Patterns of divergence of a large family of nodule cysteine-rich peptides in accessions of Medicago truncatula.
Nallu S, Silverstein KA, Zhou P, Young ND, Vandenbosch KA., Plant J 78(4), 2014
PMID: 24635121
The transcriptional activator LdtR from 'Candidatus Liberibacter asiaticus' mediates osmotic stress tolerance.
Pagliai FA, Gardner CL, Bojilova L, Sarnegrim A, Tamayo C, Potts AH, Teplitski M, Folimonova SY, Gonzalez CF, Lorca GL., PLoS Pathog 10(4), 2014
PMID: 24763829
Liberibacter crescens gen. nov., sp. nov., the first cultured member of the genus Liberibacter.
Fagen JR, Leonard MT, Coyle JF, McCullough CM, Davis-Richardson AG, Davis MJ, Triplett EW., Int J Syst Evol Microbiol 64(pt 7), 2014
PMID: 24786353
Sinorhizobium meliloti flavin secretion and bacteria-host interaction: role of the bifunctional RibBA protein.
Yurgel SN, Rice J, Domreis E, Lynch J, Sa N, Qamar Z, Rajamani S, Gao M, Roje S, Bauer WD., Mol Plant Microbe Interact 27(5), 2014
PMID: 24405035
Modulation of endogenous indole-3-acetic acid biosynthesis in bacteroids within Medicago sativa nodules.
Bianco C, Senatore B, Arbucci S, Pieraccini G, Defez R., Appl Environ Microbiol 80(14), 2014
PMID: 24814784
A nonRD receptor-like kinase prevents nodule early senescence and defense-like reactions during symbiosis.
Berrabah F, Bourcy M, Eschstruth A, Cayrel A, Guefrachi I, Mergaert P, Wen J, Jean V, Mysore KS, Gourion B, Ratet P., New Phytol 203(4), 2014
PMID: 24916161
Biogeography of Sinorhizobium meliloti nodulating alfalfa in different Croatian regions.
Donnarumma F, Bazzicalupo M, Blažinkov M, Mengoni A, Sikora S, Babić KH., Res Microbiol 165(7), 2014
PMID: 24959651
Overexpression of a non-native deoxyxylulose-dependent vitamin B6 pathway in Bacillus subtilis for the production of pyridoxine.
Commichau FM, Alzinger A, Sande R, Bretzel W, Meyer FM, Chevreux B, Wyss M, Hohmann HP, Prágai Z., Metab Eng 25(), 2014
PMID: 24972371
Pseudomonas syringae evades host immunity by degrading flagellin monomers with alkaline protease AprA.
Pel MJ, van Dijken AJ, Bardoel BW, Seidl MF, van der Ent S, van Strijp JA, Pieterse CM., Mol Plant Microbe Interact 27(7), 2014
PMID: 24654978
Riboregulation in plant-associated α-proteobacteria.
Becker A, Overlöper A, Schlüter JP, Reinkensmeier J, Robledo M, Giegerich R, Narberhaus F, Evguenieva-Hackenberg E., RNA Biol 11(5), 2014
PMID: 25003187
The nitrate-sensing NasST system regulates nitrous oxide reductase and periplasmic nitrate reductase in Bradyrhizobium japonicum.
Sánchez C, Itakura M, Okubo T, Matsumoto T, Yoshikawa H, Gotoh A, Hidaka M, Uchida T, Minamisawa K., Environ Microbiol 16(10), 2014
PMID: 24947409
Nodule carbohydrate catabolism is enhanced in the Medicago truncatula A17-Sinorhizobium medicae WSM419 symbiosis.
Larrainzar E, Gil-Quintana E, Seminario A, Arrese-Igor C, González EM., Front Microbiol 5(), 2014
PMID: 25221545
Shaping bacterial symbiosis with legumes by experimental evolution.
Marchetti M, Jauneau A, Capela D, Remigi P, Gris C, Batut J, Masson-Boivin C., Mol Plant Microbe Interact 27(9), 2014
PMID: 25105803
Transient hypermutagenesis accelerates the evolution of legume endosymbionts following horizontal gene transfer.
Remigi P, Capela D, Clerissi C, Tasse L, Torchet R, Bouchez O, Batut J, Cruveiller S, Rocha EP, Masson-Boivin C., PLoS Biol 12(9), 2014
PMID: 25181317
RNA-Seq analysis of the multipartite genome of Rhizobium etli CE3 shows different replicon contributions under heat and saline shock.
López-Leal G, Tabche ML, Castillo-Ramírez S, Mendoza-Vargas A, Ramírez-Romero MA, Dávila G., BMC Genomics 15(), 2014
PMID: 25201548
Divergent nod-containing Bradyrhizobium sp. DOA9 with a megaplasmid and its host range.
Teamtisong K, Songwattana P, Noisangiam R, Piromyou P, Boonkerd N, Tittabutr P, Minamisawa K, Nantagij A, Okazaki S, Abe M, Uchiumi T, Teaumroong N., Microbes Environ 29(4), 2014
PMID: 25283477
Complete Genome Sequence of the RmInt1 Group II Intronless Sinorhizobium meliloti Strain RMO17.
Toro N, Martínez-Abarca F, Nisa-Martínez R., Genome Announc 2(5), 2014
PMID: 25301650
Examination of prokaryotic multipartite genome evolution through experimental genome reduction.
diCenzo GC, MacLean AM, Milunovic B, Golding GB, Finan TM., PLoS Genet 10(10), 2014
PMID: 25340565
Insights into the strategies used by related group II introns to adapt successfully for the colonisation of a bacterial genome.
Martínez-Rodríguez L, García-Rodríguez FM, Molina-Sánchez MD, Toro N, Martínez-Abarca F., RNA Biol 11(8), 2014
PMID: 25482895
A novel widespread interkingdom signaling circuit.
González JF, Venturi V., Trends Plant Sci 18(3), 2013
PMID: 23089307
Partial complementation of Sinorhizobium meliloti bacA mutant phenotypes by the Mycobacterium tuberculosis BacA protein.
Arnold MF, Haag AF, Capewell S, Boshoff HI, James EK, McDonald R, Mair I, Mitchell AM, Kerscher B, Mitchell TJ, Mergaert P, Barry CE, Scocchi M, Zanda M, Campopiano DJ, Ferguson GP., J Bacteriol 195(2), 2013
PMID: 23161027
Complete Genome Sequence of the Alfalfa Symbiont Sinorhizobium/Ensifer meliloti Strain GR4.
Martínez-Abarca F, Martínez-Rodríguez L, López-Contreras JA, Jiménez-Zurdo JI, Toro N., Genome Announc 1(1), 2013
PMID: 23409262
Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti.
Galardini M, Pini F, Bazzicalupo M, Biondi EG, Mengoni A., Genome Biol Evol 5(3), 2013
PMID: 23431003
Genome Sequence of Sinorhizobium meliloti Rm41.
Weidner S, Baumgarth B, Göttfert M, Jaenicke S, Pühler A, Schneiker-Bekel S, Serrania J, Szczepanowski R, Becker A., Genome Announc 1(1), 2013
PMID: 23405285
Directed construction and analysis of a Sinorhizobium meliloti pSymA deletion mutant library.
Yurgel SN, Mortimer MW, Rice JT, Humann JL, Kahn ML., Appl Environ Microbiol 79(6), 2013
PMID: 23335760
Insights into the noncoding RNome of nitrogen-fixing endosymbiotic α-proteobacteria.
Jiménez-Zurdo JI, Valverde C, Becker A., Mol Plant Microbe Interact 26(2), 2013
PMID: 22991999
Queuosine biosynthesis is required for sinorhizobium meliloti-induced cytoskeletal modifications on HeLa Cells and symbiosis with Medicago truncatula.
Marchetti M, Capela D, Poincloux R, Benmeradi N, Auriac MC, Le Ru A, Maridonneau-Parini I, Batut J, Masson-Boivin C., PLoS One 8(2), 2013
PMID: 23409119
Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies.
Sugawara M, Epstein B, Badgley BD, Unno T, Xu L, Reese J, Gyaneshwar P, Denny R, Mudge J, Bharti AK, Farmer AD, May GD, Woodward JE, Médigue C, Vallenet D, Lajus A, Rouy Z, Martinez-Vaz B, Tiffin P, Young ND, Sadowsky MJ., Genome Biol 14(2), 2013
PMID: 23425606
Phylogenetic analysis of erythritol catabolic loci within the Rhizobiales and proteobacteria.
Geddes BA, Hausner G, Oresnik IJ., BMC Microbiol 13(), 2013
PMID: 23432981
Global mapping of transcription start sites and promoter motifs in the symbiotic α-proteobacterium Sinorhizobium meliloti 1021.
Schlüter JP, Reinkensmeier J, Barnett MJ, Lang C, Krol E, Giegerich R, Long SR, Becker A., BMC Genomics 14(), 2013
PMID: 23497287
Functional analysis of the copy 1 of the fixNOQP operon of Ensifer meliloti under free-living micro-oxic and symbiotic conditions.
Torres MJ, Hidalgo-García A, Bedmar EJ, Delgado MJ., J Appl Microbiol 114(6), 2013
PMID: 23414432
Next-generation annotation of prokaryotic genomes with EuGene-P: application to Sinorhizobium meliloti 2011.
Sallet E, Roux B, Sauviac L, Jardinaud MF, Carrère S, Faraut T, de Carvalho-Niebel F, Gouzy J, Gamas P, Capela D, Bruand C, Schiex T., DNA Res 20(4), 2013
PMID: 23599422
Commonalities and differences among symbiosis islands of three Mesorhizobium loti strains.
Kasai-Maita H, Hirakawa H, Nakamura Y, Kaneko T, Miki K, Maruya J, Okazaki S, Tabata S, Saeki K, Sato S., Microbes Environ 28(2), 2013
PMID: 23666538
Temporal expression program of quorum sensing-based transcription regulation in Sinorhizobium meliloti.
Charoenpanich P, Meyer S, Becker A, McIntosh M., J Bacteriol 195(14), 2013
PMID: 23687265
Plant phenolics: recent advances on their biosynthesis, genetics, and ecophysiology.
Cheynier V, Comte G, Davies KM, Lattanzio V, Martens S., Plant Physiol Biochem 72(), 2013
PMID: 23774057
Independent activity of the homologous small regulatory RNAs AbcR1 and AbcR2 in the legume symbiont Sinorhizobium meliloti.
Torres-Quesada O, Millán V, Nisa-Martínez R, Bardou F, Crespi M, Toro N, Jiménez-Zurdo JI., PLoS One 8(7), 2013
PMID: 23869210
The DivJ, CbrA and PleC system controls DivK phosphorylation and symbiosis in Sinorhizobium meliloti.
Pini F, Frage B, Ferri L, De Nisco NJ, Mohapatra SS, Taddei L, Fioravanti A, Dewitte F, Galardini M, Brilli M, Villeret V, Bazzicalupo M, Mengoni A, Walker GC, Becker A, Biondi EG., Mol Microbiol 90(1), 2013
PMID: 23909720
Antimicrobial nodule-specific cysteine-rich peptides induce membrane depolarization-associated changes in the transcriptome of Sinorhizobium meliloti.
Tiricz H, Szucs A, Farkas A, Pap B, Lima RM, Maróti G, Kondorosi É, Kereszt A., Appl Environ Microbiol 79(21), 2013
PMID: 23995935
Thermotoga lettingae can salvage cobinamide to synthesize vitamin B12.
Butzin NC, Secinaro MA, Swithers KS, Gogarten JP, Noll KM., Appl Environ Microbiol 79(22), 2013
PMID: 24014541
Draft genome sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis.
Wibberg D, Blom J, Rückert C, Winkler A, Albersmeier A, Pühler A, Schlüter A, Scharf BE., J Biotechnol 168(4), 2013
PMID: 24184089
PhaP phasins play a principal role in poly-β-hydroxybutyrate accumulation in free-living Bradyrhizobium japonicum.
Yoshida K, Takemoto Y, Sotsuka T, Tanaka K, Takenaka S., BMC Microbiol 13(), 2013
PMID: 24330393
Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17.
Terpolilli J, Hill Y, Tian R, Howieson J, Bräu L, Goodwin L, Han J, Liolios K, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W., Stand Genomic Sci 9(2), 2013
PMID: 24976888
Genome sequence of Ensifer medicae strain WSM1369; an effective microsymbiont of the annual legume Medicago sphaerocarpos.
Terpolilli J, Garau G, Hill Y, Tian R, Howieson J, Bräu L, Goodwin L, Han J, Liolios K, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W., Stand Genomic Sci 9(2), 2013
PMID: 24976897
A survey of sRNA families in α-proteobacteria.
del Val C, Romero-Zaliz R, Torres-Quesada O, Peregrina A, Toro N, Jiménez-Zurdo JI., RNA Biol 9(2), 2012
PMID: 22418845
The genetics of symbiotic nitrogen fixation: comparative genomics of 14 rhizobia strains by resolution of protein clusters.
Black M, Moolhuijzen P, Chapman B, Barrero R, Howieson J, Hungria M, Bellgard M., Genes (Basel) 3(1), 2012
PMID: 24704847
Role of cysteine residues and disulfide bonds in the activity of a legume root nodule-specific, cysteine-rich peptide.
Haag AF, Kerscher B, Dall'Angelo S, Sani M, Longhi R, Baloban M, Wilson HM, Mergaert P, Zanda M, Ferguson GP., J Biol Chem 287(14), 2012
PMID: 22351783
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A., BMC Genomics 13(), 2012
PMID: 22443545
Complete genome sequence of Bradyrhizobium sp. S23321: insights into symbiosis evolution in soil oligotrophs.
Okubo T, Tsukui T, Maita H, Okamoto S, Oshima K, Fujisawa T, Saito A, Futamata H, Hattori R, Shimomura Y, Haruta S, Morimoto S, Wang Y, Sakai Y, Hattori M, Aizawa S, Nagashima KV, Masuda S, Hattori T, Yamashita A, Bao Z, Hayatsu M, Kajiya-Kanegae H, Yoshinaga I, Sakamoto K, Toyota K, Nakao M, Kohara M, Anda M, Niwa R, Jung-Hwan P, Sameshima-Saito R, Tokuda S, Yamamoto S, Yamamoto S, Yokoyama T, Akutsu T, Nakamura Y, Nakahira-Yanaka Y, Takada Hoshino Y, Hirakawa H, Mitsui H, Terasawa K, Itakura M, Sato S, Ikeda-Ohtsubo W, Sakakura N, Kaminuma E, Minamisawa K., Microbes Environ 27(3), 2012
PMID: 22452844
Mutualistic interactions between vitamin B12 -dependent algae and heterotrophic bacteria exhibit regulation.
Kazamia E, Czesnick H, Nguyen TT, Croft MT, Sherwood E, Sasso S, Hodson SJ, Warren MJ, Smith AG., Environ Microbiol 14(6), 2012
PMID: 22463064
A positive correlation between bacterial autoaggregation and biofilm formation in native Sinorhizobium meliloti isolates from Argentina.
Sorroche FG, Spesia MB, Zorreguieta A, Giordano W., Appl Environ Microbiol 78(12), 2012
PMID: 22492433
Plant-activated bacterial receptor adenylate cyclases modulate epidermal infection in the Sinorhizobium meliloti-Medicago symbiosis.
Tian CF, Garnerone AM, Mathieu-Demazière C, Masson-Boivin C, Batut J., Proc Natl Acad Sci U S A 109(17), 2012
PMID: 22493242
Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes.
Dos Santos PC, Fang Z, Mason SW, Setubal JC, Dixon R., BMC Genomics 13(), 2012
PMID: 22554235
The conserved polarity factor podJ1 impacts multiple cell envelope-associated functions in Sinorhizobium meliloti.
Fields AT, Navarrete CS, Zare AZ, Huang Z, Mostafavi M, Lewis JC, Rezaeihaghighi Y, Brezler BJ, Ray S, Rizzacasa AL, Barnett MJ, Long SR, Chen EJ, Chen JC., Mol Microbiol 84(5), 2012
PMID: 22553970
A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules.
Queiroux C, Washburn BK, Davis OM, Stewart J, Brewer TE, Lyons MR, Jones KM., BMC Microbiol 12(), 2012
PMID: 22587634
Dual RpoH sigma factors and transcriptional plasticity in a symbiotic bacterium.
Barnett MJ, Bittner AN, Toman CJ, Oke V, Long SR., J Bacteriol 194(18), 2012
PMID: 22773790
Hfq influences multiple transport systems and virulence in the plant pathogen Agrobacterium tumefaciens.
Wilms I, Möller P, Stock AM, Gurski R, Lai EM, Narberhaus F., J Bacteriol 194(19), 2012
PMID: 22821981
Control of hydroxyproline catabolism in Sinorhizobium meliloti.
White CE, Gavina JM, Morton R, Britz-McKibbin P, Finan TM., Mol Microbiol 85(6), 2012
PMID: 22804907
Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae.
Epstein B, Branca A, Mudge J, Bharti AK, Briskine R, Farmer AD, Sugawara M, Young ND, Sadowsky MJ, Tiffin P., PLoS Genet 8(8), 2012
PMID: 22876202
Quantitative proteomic analysis of the Hfq-regulon in Sinorhizobium meliloti 2011.
Sobrero P, Schlüter JP, Lanner U, Schlosser A, Becker A, Valverde C., PLoS One 7(10), 2012
PMID: 23119037
The ABCs of plasmid replication and segregation.
Pinto UM, Pappas KM, Winans SC., Nat Rev Microbiol 10(11), 2012
PMID: 23070556
NODULE ROOT and COCHLEATA maintain nodule development and are legume orthologs of Arabidopsis BLADE-ON-PETIOLE genes.
Couzigou JM, Zhukov V, Mondy S, Abu el Heba G, Cosson V, Ellis TH, Ambrose M, Wen J, Tadege M, Tikhonovich I, Mysore KS, Putterill J, Hofer J, Borisov AY, Ratet P., Plant Cell 24(11), 2012
PMID: 23136374
Sinorhizobium meliloti sigma factors RpoE1 and RpoE4 are activated in stationary phase in response to sulfite.
Bastiat B, Sauviac L, Picheraux C, Rossignol M, Bruand C., PLoS One 7(11), 2012
PMID: 23226379
Genomic basis of broad host range and environmental adaptability of Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 which are used in inoculants for common bean (Phaseolus vulgaris L.).
Ormeño-Orrillo E, Menna P, Almeida LG, Ollero FJ, Nicolás MF, Pains Rodrigues E, Shigueyoshi Nakatani A, Silva Batista JS, Oliveira Chueire LM, Souza RC, Ribeiro Vasconcelos AT, Megías M, Hungria M, Martínez-Romero E., BMC Genomics 13(), 2012
PMID: 23270491
Characterization of a copper-resistant symbiotic bacterium isolated from Medicago lupulina growing in mine tailings.
Fan LM, Ma ZQ, Liang JQ, Li HF, Wang ET, Wei GH., Bioresour Technol 102(2), 2011
PMID: 20843682
Delftia sp. JD2: a potential Cr(VI)-reducing agent with plant growth-promoting activity.
Morel MA, Ubalde MC, Braña V, Castro-Sowinski S., Arch Microbiol 193(1), 2011
PMID: 20857088
Origin and evolution of a novel DnaA-like plasmid replication type in Rhodobacterales.
Petersen J, Brinkmann H, Berger M, Brinkhoff T, Päuker O, Pradella S., Mol Biol Evol 28(3), 2011
PMID: 21097494
Rhizobia species: A Boon for "Plant Genetic Engineering".
Patel U, Sinha S., Indian J Microbiol 51(4), 2011
PMID: 23024417
Biochemical characterization of Sinorhizobium meliloti mutants reveals gene products involved in the biosynthesis of the unusual lipid A very long-chain fatty acid.
Haag AF, Wehmeier S, Muszyński A, Kerscher B, Fletcher V, Berry SH, Hold GL, Carlson RW, Ferguson GP., J Biol Chem 286(20), 2011
PMID: 21454518
Identification of Mesorhizobium loti genes relevant to symbiosis by using signature-tagged mutants.
Borjigin N, Furukawa K, Shimoda Y, Tabata S, Sato S, Eda S, Minamisawa K, Mitsui H., Microbes Environ 26(2), 2011
PMID: 21502733
Spread of the group II intron RmInt1 and its insertion sequence target sites in the plant endosymbiont Sinorhizobium meliloti.
Biondi EG, Toro N, Bazzicalupo M, Martínez-Abarca F., Mob Genet Elements 1(1), 2011
PMID: 22016840
Genetic and biochemical characterization of a pathway for the degradation of 2-aminoethylphosphonate in Sinorhizobium meliloti 1021.
Borisova SA, Christman HD, Metcalf ME, Zulkepli NA, Zhang JK, van der Donk WA, Metcalf WW., J Biol Chem 286(25), 2011
PMID: 21543322
Population genomics of Sinorhizobium medicae based on low-coverage sequencing of sympatric isolates.
Bailly X, Giuntini E, Sexton MC, Lower RP, Harrison PW, Kumar N, Young JP., ISME J 5(11), 2011
PMID: 21562597
Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti.
Galardini M, Mengoni A, Brilli M, Pini F, Fioravanti A, Lucas S, Lapidus A, Cheng JF, Goodwin L, Pitluck S, Land M, Hauser L, Woyke T, Mikhailova N, Ivanova N, Daligault H, Bruce D, Detter C, Tapia R, Han C, Teshima H, Mocali S, Bazzicalupo M, Biondi EG., BMC Genomics 12(), 2011
PMID: 21569405
Intragenomic diversity of Rhizobium leguminosarum bv. trifolii clover nodule isolates.
Mazur A, Stasiak G, Wielbo J, Kubik-Komar A, Marek-Kozaczuk M, Skorupska A., BMC Microbiol 11(), 2011
PMID: 21619713
CONTIGuator: a bacterial genomes finishing tool for structural insights on draft genomes.
Galardini M, Biondi EG, Bazzicalupo M, Mengoni A., Source Code Biol Med 6(), 2011
PMID: 21693004
Bacterial RuBisCO is required for efficient Bradyrhizobium/Aeschynomene symbiosis.
Gourion B, Delmotte N, Bonaldi K, Nouwen N, Vorholt JA, Giraud E., PLoS One 6(7), 2011
PMID: 21750740
Genomic species are ecological species as revealed by comparative genomics in Agrobacterium tumefaciens.
Lassalle F, Campillo T, Vial L, Baude J, Costechareyre D, Chapulliot D, Shams M, Abrouk D, Lavire C, Oger-Desfeux C, Hommais F, Guéguen L, Daubin V, Muller D, Nesme X., Genome Biol Evol 3(), 2011
PMID: 21795751
FadD is required for utilization of endogenous fatty acids released from membrane lipids.
Pech-Canul Á, Nogales J, Miranda-Molina A, Álvarez L, Geiger O, Soto MJ, López-Lara IM., J Bacteriol 193(22), 2011
PMID: 21926226
Protection of Sinorhizobium against host cysteine-rich antimicrobial peptides is critical for symbiosis.
Haag AF, Baloban M, Sani M, Kerscher B, Pierre O, Farkas A, Longhi R, Boncompagni E, Hérouart D, Dall'angelo S, Kondorosi E, Zanda M, Mergaert P, Ferguson GP., PLoS Biol 9(10), 2011
PMID: 21990963
Conservation and Occurrence of Trans-Encoded sRNAs in the Rhizobiales.
Reinkensmeier J, Schlüter JP, Giegerich R, Becker A., Genes (Basel) 2(4), 2011
PMID: 24710299
Plant-bacteria association and symbiosis: are there common genomic traits in alphaproteobacteria?
Pini F, Galardini M, Bazzicalupo M, Mengoni A., Genes (Basel) 2(4), 2011
PMID: 24710303
Denitrification in Sinorhizobium meliloti.
Torres MJ, Rubia MI, Bedmar EJ, Delgado MJ., Biochem Soc Trans 39(6), 2011
PMID: 22103545
SMc01553 is the sixth acyl carrier protein in Sinorhizobium meliloti 1021.
Dávila-Martínez Y, Ramos-Vega AL, Contreras-Martínez S, Encarnación S, Geiger O, López-Lara IM., Microbiology 156(pt 1), 2010
PMID: 19797355
Following phylogenetic tracks of Astragalus cicer microsymbionts.
Wdowiak-Wróbel S, Małek W., Antonie Van Leeuwenhoek 97(1), 2010
PMID: 19821140
Symbiont genomics, our new tangled bank.
Medina M, Sachs JL., Genomics 95(3), 2010
PMID: 20053372
Identification of tail genes in the temperate phage 16-3 of Sinorhizobium meliloti 41.
Deák V, Lukács R, Buzás Z, Pálvölgyi A, Papp PP, Orosz L, Putnoky P., J Bacteriol 192(6), 2010
PMID: 20081029
Proteomic alterations explain phenotypic changes in Sinorhizobium meliloti lacking the RNA chaperone Hfq.
Barra-Bily L, Fontenelle C, Jan G, Flechard M, Trautwetter A, Pandey SP, Walker GC, Blanco C., J Bacteriol 192(6), 2010
PMID: 20081032
The Sinorhizobium meliloti RNA chaperone Hfq mediates symbiosis of S. meliloti and alfalfa.
Barra-Bily L, Pandey SP, Trautwetter A, Blanco C, Walker GC., J Bacteriol 192(6), 2010
PMID: 20081033
The Sinorhizobium meliloti RNA chaperone Hfq influences central carbon metabolism and the symbiotic interaction with alfalfa.
Torres-Quesada O, Oruezabal RI, Peregrina A, Jofré E, Lloret J, Rivilla R, Toro N, Jiménez-Zurdo JI., BMC Microbiol 10(), 2010
PMID: 20205931
Transcriptome profiling of a Sinorhizobium meliloti fadD mutant reveals the role of rhizobactin 1021 biosynthesis and regulation genes in the control of swarming.
Nogales J, Domínguez-Ferreras A, Amaya-Gómez CV, van Dillewijn P, Cuéllar V, Sanjuán J, Olivares J, Soto MJ., BMC Genomics 11(), 2010
PMID: 20210991
RpoE2 of Sinorhizobium meliloti is necessary for trehalose synthesis and growth in hyperosmotic media.
Flechard M, Fontenelle C, Blanco C, Goude R, Ermel G, Trautwetter A., Microbiology 156(pt 6), 2010
PMID: 20223801
Identification and characterization of the intracellular poly-3-hydroxybutyrate depolymerase enzyme PhaZ of Sinorhizobium meliloti.
Trainer MA, Capstick D, Zachertowska A, Lam KN, Clark SR, Charles TC., BMC Microbiol 10(), 2010
PMID: 20346169
Role of the Sinorhizobium meliloti global regulator Hfq in gene regulation and symbiosis.
Gao M, Barnett MJ, Long SR, Teplitski M., Mol Plant Microbe Interact 23(4), 2010
PMID: 20192823
A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti.
Schlüter JP, Reinkensmeier J, Daschkey S, Evguenieva-Hackenberg E, Janssen S, Jänicke S, Becker JD, Giegerich R, Becker A., BMC Genomics 11(), 2010
PMID: 20398411
Internalization of a thiazole-modified peptide in Sinorhizobium meliloti occurs by BacA-dependent and -independent mechanisms.
Wehmeier S, Arnold MF, Marlow VL, Aouida M, Myka KK, Fletcher V, Benincasa M, Scocchi M, Ramotar D, Ferguson GP., Microbiology 156(pt 9), 2010
PMID: 20507886
A locus necessary for the transport and catabolism of erythritol in Sinorhizobium meliloti.
Geddes BA, Pickering BS, Poysti NJ, Collins H, Yudistira H, Oresnik IJ., Microbiology 156(pt 10), 2010
PMID: 20671019
Evolutionary dynamics of insertion sequences in relation to the evolutionary histories of the chromosome and symbiotic plasmid genes of Rhizobium etli populations.
Lozano L, Hernández-González I, Bustos P, Santamaría RI, Souza V, Young JP, Dávila G, González V., Appl Environ Microbiol 76(19), 2010
PMID: 20675442
Plant-microbe communications for symbiosis.
Kawaguchi M, Minamisawa K., Plant Cell Physiol 51(9), 2010
PMID: 20841337
The role of sigma factor RpoH1 in the pH stress response of Sinorhizobium meliloti.
de Lucena DK, Pühler A, Weidner S., BMC Microbiol 10(), 2010
PMID: 20955556
The prevalence of gene duplications and their ancient origin in Rhodobacter sphaeroides 2.4.1.
Bavishi A, Lin L, Schroeder K, Peters A, Cho H, Choudhary M., BMC Microbiol 10(), 2010
PMID: 21192830
A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data.
Becker A, Barnett MJ, Capela D, Dondrup M, Kamp PB, Krol E, Linke B, Rüberg S, Runte K, Schroeder BK, Weidner S, Yurgel SN, Batut J, Long SR, Pühler A, Goesmann A., J Biotechnol 140(1-2), 2009
PMID: 19103235
A new clade of Mesorhizobium nodulating Alhagi sparsifolia.
Wei G, Chen W, Young JP, Bontemps C., Syst Appl Microbiol 32(1), 2009
PMID: 19081692
Stabilizing mechanisms in a legume-rhizobium mutualism.
Heath KD, Tiffin P., Evolution 63(3), 2009
PMID: 19087187
Essential role for the BacA protein in the uptake of a truncated eukaryotic peptide in Sinorhizobium meliloti.
Marlow VL, Haag AF, Kobayashi H, Fletcher V, Scocchi M, Walker GC, Ferguson GP., J Bacteriol 191(5), 2009
PMID: 19074376
A shotgun lipidomics approach in Sinorhizobium meliloti as a tool in functional genomics.
Basconcillo LS, Zaheer R, Finan TM, McCarry BE., J Lipid Res 50(6), 2009
PMID: 19096048
Characterization of a {gamma}-aminobutyric acid transport system of Rhizobium leguminosarum bv. viciae 3841.
White JP, Prell J, Ramachandran VK, Poole PS., J Bacteriol 191(5), 2009
PMID: 19103927
Comparative proteomic studies of root-microbe interactions.
Mathesius U., J Proteomics 72(3), 2009
PMID: 19152841
SMb20651 is another acyl carrier protein from Sinorhizobium meliloti.
Ramos-Vega AL, Dávila-Martínez Y, Sohlenkamp C, Contreras-Martínez S, Encarnación S, Geiger O, López-Lara IM., Microbiology 155(pt 1), 2009
PMID: 19118366
Novel genes related to nodulation, secretion systems, and surface structures revealed by a genome draft of Rhizobium tropici strain PRF 81.
Pinto FG, Chueire LM, Vasconcelos AT, Nicolás MF, Almeida LG, Souza RC, Menna P, Barcellos FG, Megías M, Hungria M., Funct Integr Genomics 9(2), 2009
PMID: 19184146
Pathway of gamma-aminobutyrate metabolism in Rhizobium leguminosarum 3841 and its role in symbiosis.
Prell J, Bourdès A, Karunakaran R, Lopez-Gomez M, Poole P., J Bacteriol 191(7), 2009
PMID: 19181799
Role of potassium uptake systems in Sinorhizobium meliloti osmoadaptation and symbiotic performance.
Domínguez-Ferreras A, Muñoz S, Olivares J, Soto MJ, Sanjuán J., J Bacteriol 191(7), 2009
PMID: 19181803
Cyclopropane fatty acyl synthase in Sinorhizobium meliloti.
Saborido Basconcillo L, Zaheer R, Finan TM, McCarry BE., Microbiology 155(pt 2), 2009
PMID: 19202086
The Rhizobium etli RpoH1 and RpoH2 sigma factors are involved in different stress responses.
Martínez-Salazar JM, Sandoval-Calderón M, Guo X, Castillo-Ramírez S, Reyes A, Loza MG, Rivera J, Alvarado-Affantranger X, Sánchez F, González V, Dávila G, Ramírez-Romero MA., Microbiology 155(pt 2), 2009
PMID: 19202087
Multilocus sequence analysis of the genus Bradyrhizobium.
Rivas R, Martens M, de Lajudie P, Willems A., Syst Appl Microbiol 32(2), 2009
PMID: 19201125
Genetic and biochemical properties of an alkaline phosphatase PhoX family protein found in many bacteria.
Zaheer R, Morton R, Proudfoot M, Yakunin A, Finan TM., Environ Microbiol 11(6), 2009
PMID: 19245529
Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.
Slater SC, Goldman BS, Goodner B, Setubal JC, Farrand SK, Nester EW, Burr TJ, Banta L, Dickerman AW, Paulsen I, Otten L, Suen G, Welch R, Almeida NF, Arnold F, Burton OT, Du Z, Ewing A, Godsy E, Heisel S, Houmiel KL, Jhaveri J, Lu J, Miller NM, Norton S, Chen Q, Phoolcharoen W, Ohlin V, Ondrusek D, Pride N, Stricklin SL, Sun J, Wheeler C, Wilson L, Zhu H, Wood DW., J Bacteriol 191(8), 2009
PMID: 19251847
Effects of indole-3-acetic acid on Sinorhizobium meliloti survival and on symbiotic nitrogen fixation and stem dry weight production.
Imperlini E, Bianco C, Lonardo E, Camerini S, Cermola M, Moschetti G, Defez R., Appl Microbiol Biotechnol 83(4), 2009
PMID: 19343341
Multiple chaperonins in bacteria--why so many?
Lund PA., FEMS Microbiol Rev 33(4), 2009
PMID: 19416363
Orphan LuxR regulators of quorum sensing.
Patankar AV, González JE., FEMS Microbiol Rev 33(4), 2009
PMID: 19222586
Transcriptomic analysis of Rhizobium leguminosarum biovar viciae in symbiosis with host plants Pisum sativum and Vicia cracca.
Karunakaran R, Ramachandran VK, Seaman JC, East AK, Mouhsine B, Mauchline TH, Prell J, Skeffington A, Poole PS., J Bacteriol 191(12), 2009
PMID: 19376875
Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems.
Schmeisser C, Liesegang H, Krysciak D, Bakkou N, Le Quéré A, Wollherr A, Heinemeyer I, Morgenstern B, Pommerening-Röser A, Flores M, Palacios R, Brenner S, Gottschalk G, Schmitz RA, Broughton WJ, Perret X, Strittmatter AW, Streit WR., Appl Environ Microbiol 75(12), 2009
PMID: 19376903
A shotgun lipidomics study of a putative lysophosphatidic acid acyl transferase (PlsC) in Sinorhizobium meliloti.
Basconcillo LS, Zaheer R, Finan TM, McCarry BE., J Chromatogr B Analyt Technol Biomed Life Sci 877(26), 2009
PMID: 19525157
The Symbiosis Interactome: a computational approach reveals novel components, functional interactions and modules in Sinorhizobium meliloti.
Rodriguez-Llorente I, Caviedes MA, Dary M, Palomares AJ, Cánovas FM, Peregrín-Alvarez JM., BMC Syst Biol 3(), 2009
PMID: 19531251
RNase J is involved in the 5'-end maturation of 16S rRNA and 23S rRNA in Sinorhizobium meliloti.
Madhugiri R, Evguenieva-Hackenberg E., FEBS Lett 583(14), 2009
PMID: 19540834
Metabolic capacity of Sinorhizobium (Ensifer) meliloti strains as determined by phenotype MicroArray analysis.
Biondi EG, Tatti E, Comparini D, Giuntini E, Mocali S, Giovannetti L, Bazzicalupo M, Mengoni A, Viti C., Appl Environ Microbiol 75(16), 2009
PMID: 19561177
Diversity and evolution of repABC type plasmids in Rhodobacterales.
Petersen J, Brinkmann H, Pradella S., Environ Microbiol 11(10), 2009
PMID: 19601964
Conjugative plasmids: vessels of the communal gene pool.
Norman A, Hansen LH, Sørensen SJ., Philos Trans R Soc Lond B Biol Sci 364(1527), 2009
PMID: 19571247
Plasmid transfer systems in the rhizobia.
Ding H, Hynes MF., Can J Microbiol 55(8), 2009
PMID: 19898531
MERE1, a low-copy-number copia-type retroelement in Medicago truncatula active during tissue culture.
Rakocevic A, Mondy S, Tirichine L, Cosson V, Brocard L, Iantcheva A, Cayrel A, Devier B, Abu El-Heba GA, Ratet P., Plant Physiol 151(3), 2009
PMID: 19656907
Symbiotic diversity of Ensifer meliloti strains recovered from various legume species in Tunisia.
Mnasri B, Badri Y, Saïdi S, de Lajudie P, Mhamdi R., Syst Appl Microbiol 32(8), 2009
PMID: 19665858
Identification of direct transcriptional target genes of ExoS/ChvI two-component signaling in Sinorhizobium meliloti.
Chen EJ, Fisher RF, Perovich VM, Sabio EA, Long SR., J Bacteriol 191(22), 2009
PMID: 19749054
Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes?
Masson-Boivin C, Giraud E, Perret X, Batut J., Trends Microbiol 17(10), 2009
PMID: 19766492
Genome variation in the symbiotic nitrogen-fixing bacterium Sinorhizobium meliloti.
Guo H, Sun S, Eardly B, Finan T, Xu J., Genome 52(10), 2009
PMID: 19935910
Homologous recombination and dynamics of rhizobial genomes.
Orozco-Mosqueda Mdel C, Altamirano-Hernandez J, Farias-Rodriguez R, Valencia-Cantero E, Santoyo G., Res Microbiol 160(10), 2009
PMID: 19818848
Deletion of citrate synthase restores growth of Sinorhizobium meliloti 1021 aconitase mutants.
Koziol U, Hannibal L, Rodríguez MC, Fabiano E, Kahn ML, Noya F., J Bacteriol 191(24), 2009
PMID: 19820082
Rhizobium common nod genes are required for biofilm formation.
Fujishige NA, Lum MR, De Hoff PL, Whitelegge JP, Faull KF, Hirsch AM., Mol Microbiol 67(3), 2008
PMID: 18086203
Recent Advances in Medicago truncatula Genomics.
Ané JM, Zhu H, Frugoli J., Int J Plant Genomics 2008(), 2008
PMID: 18288239
Molecular determinants of a symbiotic chronic infection.
Gibson KE, Kobayashi H, Walker GC., Annu Rev Genet 42(), 2008
PMID: 18983260
A large scale analysis of protein-protein interactions in the nitrogen-fixing bacterium Mesorhizobium loti.
Shimoda Y, Shinpo S, Kohara M, Nakamura Y, Tabata S, Sato S., DNA Res 15(1), 2008
PMID: 18192278
Analyzing stochastic transcription to elucidate the nucleoid's organization.
Riva A, Carpentier AS, Barloy-Hubler F, Chéron A, Hénaut A., BMC Genomics 9(), 2008
PMID: 18331647
The Sinorhizobium meliloti MsbA2 protein is essential for the legume symbiosis.
Beck S, Marlow VL, Woodall K, Doerrler WT, James EK, Ferguson GP., Microbiology 154(pt 4), 2008
PMID: 18375818
Transposon mediation allows a symbiotic plasmid of Rhizobium leguminosarum bv. trifolii to become a symbiosis island in Agrobacterium and Rhizobium.
Nakatsukasa H, Uchiumi T, Kucho K, Suzuki A, Higashi S, Abe M., J Gen Appl Microbiol 54(2), 2008
PMID: 18497485
The GntR-type regulators gtrA and gtrB affect cell growth and nodulation of Sinorhizobium meliloti.
Wang Y, Chen AM, Yu AY, Luo L, Yu GQ, Zhu JB, Wang YZ., J Microbiol 46(2), 2008
PMID: 18545962
In vivo expression technology (IVET) selection of genes of Rhizobium leguminosarum biovar viciae A34 expressed in the rhizosphere.
Barr M, East AK, Leonard M, Mauchline TH, Poole PS., FEMS Microbiol Lett 282(2), 2008
PMID: 18399996
The model legume Medicago truncatula A17 is poorly matched for N2 fixation with the sequenced microsymbiont Sinorhizobium meliloti 1021.
Terpolilli JJ, O'Hara GW, Tiwari RP, Dilworth MJ, Howieson JG., New Phytol 179(1), 2008
PMID: 18422896
Transcriptional interference and repression modulate the conjugative ability of the symbiotic plasmid of Rhizobium etli.
Sepúlveda E, Pérez-Mendoza D, Ramírez-Romero MA, Soto MJ, López-Lara IM, Geiger O, Sanjuán J, Brom S, Romero D., J Bacteriol 190(12), 2008
PMID: 18424522
Identification of new genes in Sinorhizobium meliloti using the Genome Sequencer FLX system.
Mao C, Evans C, Jensen RV, Sobral BW., BMC Microbiol 8(), 2008
PMID: 18454850
Response of Sinorhizobium meliloti to elevated concentrations of cadmium and zinc.
Rossbach S, Mai DJ, Carter EL, Sauviac L, Capela D, Bruand C, de Bruijn FJ., Appl Environ Microbiol 74(13), 2008
PMID: 18469129
Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11.
Stiens M, Becker A, Bekel T, Gödde V, Goesmann A, Niehaus K, Schneiker-Bekel S, Selbitschka W, Weidner S, Schlüter A, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18562031
Potassium and sodium transporters of Pseudomonas aeruginosa regulate virulence to barley.
Ueda A, Wood TK., Appl Microbiol Biotechnol 79(5), 2008
PMID: 18481058
Progress towards understanding the fate of plasmids in bacterial communities.
Slater FR, Bailey MJ, Tett AJ, Turner SL., FEMS Microbiol Ecol 66(1), 2008
PMID: 18507680
Microdiversity of Burkholderiales associated with mycorrhizal and nonmycorrhizal roots of Medicago truncatula.
Offre P, Pivato B, Mazurier S, Siblot S, Berta G, Lemanceau P, Mougel C., FEMS Microbiol Ecol 65(2), 2008
PMID: 18507681
Conjugal properties of the Sinorhizobium meliloti plasmid mobilome.
Pistorio M, Giusti MA, Del Papa MF, Draghi WO, Lozano MJ, Tejerizo GT, Lagares A., FEMS Microbiol Ecol 65(3), 2008
PMID: 18537840
Mutational analysis of the Sinorhizobium meliloti short-chain dehydrogenase/reductase family reveals substantial contribution to symbiosis and catabolic diversity.
Jacob AI, Adham SA, Capstick DS, Clark SR, Spence T, Charles TC., Mol Plant Microbe Interact 21(7), 2008
PMID: 18533838
A common genomic framework for a diverse assembly of plasmids in the symbiotic nitrogen fixing bacteria.
Crossman LC, Castillo-Ramírez S, McAnnula C, Lozano L, Vernikos GS, Acosta JL, Ghazoui ZF, Hernández-González I, Meakin G, Walker AW, Hynes MF, Young JP, Downie JA, Romero D, Johnston AW, Dávila G, Parkhill J, González V., PLoS One 3(7), 2008
PMID: 18596979
Construction of signature-tagged mutant library in Mesorhizobium loti as a powerful tool for functional genomics.
Shimoda Y, Mitsui H, Kamimatsuse H, Minamisawa K, Nishiyama E, Ohtsubo Y, Nagata Y, Tsuda M, Shinpo S, Watanabe A, Kohara M, Yamada M, Nakamura Y, Tabata S, Sato S., DNA Res 15(5), 2008
PMID: 18658183
Formate-dependent autotrophic growth in Sinorhizobium meliloti.
Pickering BS, Oresnik IJ., J Bacteriol 190(19), 2008
PMID: 18658261
Comparative metabolomic analysis of Sinorhizobium sp. C4 during the degradation of phenanthrene.
Keum YS, Seo JS, Li QX, Kim JH., Appl Microbiol Biotechnol 80(5), 2008
PMID: 18668240
Comprehensive assessment of the regulons controlled by the FixLJ-FixK2-FixK1 cascade in Bradyrhizobium japonicum.
Mesa S, Hauser F, Friberg M, Malaguti E, Fischer HM, Hennecke H., J Bacteriol 190(20), 2008
PMID: 18689489
Prediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011.
Valverde C, Livny J, Schlüter JP, Reinkensmeier J, Becker A, Parisi G., BMC Genomics 9(), 2008
PMID: 18793445
Sinorhizobium meliloti regulator MucR couples exopolysaccharide synthesis and motility.
Bahlawane C, McIntosh M, Krol E, Becker A., Mol Plant Microbe Interact 21(11), 2008
PMID: 18842098
Genomic panorama of Bradyrhizobium japonicum CPAC 15, a commercial inoculant strain largely established in Brazilian soils and belonging to the same serogroup as USDA 123
Godoy LeandroPereira, Vasconcelos AnaTerezaRibeiro, Chueire LigiaMariaOliveira, Souza RangelCelso, Nicolás MarisaFabiana, Barcellos FernandoGomes, Hungria Mariangela., Soil Biol Biochem 40(11), 2008
PMID: IND44118330
FtcR is a new master regulator of the flagellar system of Brucella melitensis 16M with homologs in Rhizobiaceae.
Léonard S, Ferooz J, Haine V, Danese I, Fretin D, Tibor A, de Walque S, De Bolle X, Letesson JJ., J Bacteriol 189(1), 2007
PMID: 17056750
Genomic structure and phylogeny of the plant pathogen Ralstonia solanacearum inferred from gene distribution analysis.
Guidot A, Prior P, Schoenfeld J, Carrère S, Genin S, Boucher C., J Bacteriol 189(2), 2007
PMID: 17085551
Novel type IV secretion system involved in propagation of genomic islands.
Juhas M, Crook DW, Dimopoulou ID, Lunter G, Harding RM, Ferguson DJ, Hood DW., J Bacteriol 189(3), 2007
PMID: 17122343
Dispersion of the RmInt1 group II intron in the Sinorhizobium meliloti genome upon acquisition by conjugative transfer.
Nisa-Martínez R, Jiménez-Zurdo JI, Martínez-Abarca F, Muñoz-Adelantado E, Toro N., Nucleic Acids Res 35(1), 2007
PMID: 17158161
Functional analysis of nine putative chemoreceptor proteins in Sinorhizobium meliloti.
Meier VM, Muschler P, Scharf BE., J Bacteriol 189(5), 2007
PMID: 17189365
Homologous cpn60 genes in Rhizobium leguminosarum are not functionally equivalent.
Gould PS, Burgar HR, Lund PA., Cell Stress Chaperones 12(2), 2007
PMID: 17688191
A prototype taxonomic microarray targeting the rpsA housekeeping gene permits species identification within the rhizobial genus Ensifer.
Martens M, Weidner S, Linke B, de Vos P, Gillis M, Willems A., Syst Appl Microbiol 30(5), 2007
PMID: 17291704
Characterization of Sinorhizobium meliloti triose phosphate isomerase genes.
Poysti NJ, Oresnik IJ., J Bacteriol 189(9), 2007
PMID: 17337584
A multicopper oxidase is essential for manganese oxidation and laccase-like activity in Pedomicrobium sp. ACM 3067.
Ridge JP, Lin M, Larsen EI, Fegan M, McEwan AG, Sly LI., Environ Microbiol 9(4), 2007
PMID: 17359266
Trehalose biosynthesis in Rhizobium leguminosarum bv. trifolii and its role in desiccation tolerance.
McIntyre HJ, Davies H, Hore TA, Miller SH, Dufour JP, Ronson CW., Appl Environ Microbiol 73(12), 2007
PMID: 17449695
Horizontal gene transfer and homologous recombination drive the evolution of the nitrogen-fixing symbionts of Medicago species.
Bailly X, Olivieri I, Brunel B, Cleyet-Marel JC, Béna G., J Bacteriol 189(14), 2007
PMID: 17496100
Functional characterization of the Sinorhizobium meliloti acetate metabolism genes aceA, SMc00767, and glcB.
Ramírez-Trujillo JA, Encarnación S, Salazar E, de los Santos AG, Dunn MF, Emerich DW, Calva E, Hernández-Lucas I., J Bacteriol 189(16), 2007
PMID: 17526694
Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia.
Giraud E, Moulin L, Vallenet D, Barbe V, Cytryn E, Avarre JC, Jaubert M, Simon D, Cartieaux F, Prin Y, Bena G, Hannibal L, Fardoux J, Kojadinovic M, Vuillet L, Lajus A, Cruveiller S, Rouy Z, Mangenot S, Segurens B, Dossat C, Franck WL, Chang WS, Saunders E, Bruce D, Richardson P, Normand P, Dreyfus B, Pignol D, Stacey G, Emerich D, Verméglio A, Médigue C, Sadowsky M., Science 316(5829), 2007
PMID: 17540897
Genomes of the symbiotic nitrogen-fixing bacteria of legumes.
MacLean AM, Finan TM, Sadowsky MJ., Plant Physiol 144(2), 2007
PMID: 17556525
Identification of pTi-SAKURA DNA region conferring enhancement of plasmid incompatibility and stability.
Yamamoto S, Uraji M, Tanaka K, Moriguchi K, Suzuki K., Genes Genet Syst 82(3), 2007
PMID: 17660690
DNA diversification in two Sinorhizobium species.
Guo X, Flores M, Morales L, García D, Bustos P, González V, Palacios R, Dávila G., J Bacteriol 189(17), 2007
PMID: 17601787
Effects of AiiA-mediated quorum quenching in Sinorhizobium meliloti on quorum-sensing signals, proteome patterns, and symbiotic interactions.
Gao M, Chen H, Eberhard A, Gronquist MR, Robinson JB, Connolly M, Teplitski M, Rolfe BG, Bauer WD., Mol Plant Microbe Interact 20(7), 2007
PMID: 17601171
Sequence-based analysis of pQBR103; a representative of a unique, transfer-proficient mega plasmid resident in the microbial community of sugar beet.
Tett A, Spiers AJ, Crossman LC, Ager D, Ciric L, Dow JM, Fry JC, Harris D, Lilley A, Oliver A, Parkhill J, Quail MA, Rainey PB, Saunders NJ, Seeger K, Snyder LA, Squares R, Thomas CM, Turner SL, Zhang XX, Field D, Bailey MJ., ISME J 1(4), 2007
PMID: 18043644
The ExpR/Sin quorum-sensing system controls succinoglycan production in Sinorhizobium meliloti.
Glenn SA, Gurich N, Feeney MA, González JE., J Bacteriol 189(19), 2007
PMID: 17644606
Truncated hemoglobins in actinorhizal nodules of Datisca glomerata.
Pawlowski K, Jacobsen KR, Alloisio N, Ford Denison R, Klein M, Tjepkema JD, Winzer T, Sirrenberg A, Guan C, Berry AM., Plant Biol (Stuttg) 9(6), 2007
PMID: 17682965
Motility and chemotaxis in Agrobacterium tumefaciens surface attachment and biofilm formation.
Merritt PM, Danhorn T, Fuqua C., J Bacteriol 189(22), 2007
PMID: 17766409
Novel reiterated Fnr-type proteins control the production of the symbiotic terminal oxidase cbb3 in Rhizobium etli CFN42.
Granados-Baeza MJ, Gómez-Hernández N, Mora Y, Delgado MJ, Romero D, Girard L., Mol Plant Microbe Interact 20(10), 2007
PMID: 17918626
An oligonucleotide microarray resource for transcriptional profiling of Bradyrhizobium japonicum.
Chang WS, Franck WL, Cytryn E, Jeong S, Joshi T, Emerich DW, Sadowsky MJ, Xu D, Stacey G., Mol Plant Microbe Interact 20(10), 2007
PMID: 17918631
Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics.
del Val C, Rivas E, Torres-Quesada O, Toro N, Jiménez-Zurdo JI., Mol Microbiol 66(5), 2007
PMID: 17971083
Ferrichrome utilization in a mesorhizobial population: microevolution of a three-locus system.
Carlton TM, Sullivan JT, Stuart GS, Hutt K, Lamont IL, Ronson CW., Environ Microbiol 9(12), 2007
PMID: 17991023
Degradation pathways of phenanthrene by Sinorhizobium sp. C4.
Keum YS, Seo JS, Hu Y, Li QX., Appl Microbiol Biotechnol 71(6), 2006
PMID: 16317542
Isolation of poly-3-hydroxybutyrate metabolism genes from complex microbial communities by phenotypic complementation of bacterial mutants.
Wang C, Meek DJ, Panchal P, Boruvka N, Archibald FS, Driscoll BT, Charles TC., Appl Environ Microbiol 72(1), 2006
PMID: 16391068
The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.
González V, Santamaría RI, Bustos P, Hernández-González I, Medrano-Soto A, Moreno-Hagelsieb G, Janga SC, Ramírez MA, Jiménez-Jacinto V, Collado-Vides J, Dávila G., Proc Natl Acad Sci U S A 103(10), 2006
PMID: 16505379
Identification of a megaplasmid centromere reveals genetic structural diversity within the repABC family of basic replicons.
MacLellan SR, Zaheer R, Sartor AL, MacLean AM, Finan TM., Mol Microbiol 59(5), 2006
PMID: 16468995
Transformation of rhizobia with broad-host-range plasmids by using a freeze-thaw method.
Vincze E, Bowra S., Appl Environ Microbiol 72(3), 2006
PMID: 16517691
Metabolic changes of rhizobia in legume nodules.
Prell J, Poole P., Trends Microbiol 14(4), 2006
PMID: 16520035
Symbiotic Bradyrhizobium japonicum reduces N2O surrounding the soybean root system via nitrous oxide reductase.
Sameshima-Saito R, Chiba K, Hirayama J, Itakura M, Mitsui H, Eda S, Minamisawa K., Appl Environ Microbiol 72(4), 2006
PMID: 16597953
Sinorhizobium meliloti differentiation during symbiosis with alfalfa: a transcriptomic dissection.
Capela D, Filipe C, Bobik C, Batut J, Bruand C., Mol Plant Microbe Interact 19(4), 2006
PMID: 16610739
The genome of Rhizobium leguminosarum has recognizable core and accessory components.
Young JP, Crossman LC, Johnston AW, Thomson NR, Ghazoui ZF, Hull KH, Wexler M, Curson AR, Todd JD, Poole PS, Mauchline TH, East AK, Quail MA, Churcher C, Arrowsmith C, Cherevach I, Chillingworth T, Clarke K, Cronin A, Davis P, Fraser A, Hance Z, Hauser H, Jagels K, Moule S, Mungall K, Norbertczak H, Rabbinowitsch E, Sanders M, Simmonds M, Whitehead S, Parkhill J., Genome Biol 7(4), 2006
PMID: 16640791
Investigations of Rhizobium biofilm formation.
Fujishige NA, Kapadia NN, De Hoff PL, Hirsch AM., FEMS Microbiol Ecol 56(2), 2006
PMID: 16629750
The role of PHB metabolism in the symbiosis of rhizobia with legumes.
Trainer MA, Charles TC., Appl Microbiol Biotechnol 71(4), 2006
PMID: 16703322
Identification of genistein-inducible and type III-secreted proteins of Bradyrhizobium japonicum.
Süss C, Hempel J, Zehner S, Krause A, Patschkowski T, Göttfert M., J Biotechnol 126(1), 2006
PMID: 16707185
Construction of a large signature-tagged mini-Tn5 transposon library and its application to mutagenesis of Sinorhizobium meliloti.
Pobigaylo N, Wetter D, Szymczak S, Schiller U, Kurtz S, Meyer F, Nattkemper TW, Becker A., Appl Environ Microbiol 72(6), 2006
PMID: 16751548
Characterization of the beta-ketoadipate pathway in Sinorhizobium meliloti.
MacLean AM, MacPherson G, Aneja P, Finan TM., Appl Environ Microbiol 72(8), 2006
PMID: 16885292
Transcriptome profiling reveals the importance of plasmid pSymB for osmoadaptation of Sinorhizobium meliloti.
Domínguez-Ferreras A, Pérez-Arnedo R, Becker A, Olivares J, Soto MJ, Sanjuán J., J Bacteriol 188(21), 2006
PMID: 16916894
Recombination and selection shape the molecular diversity pattern of nitrogen-fixing Sinorhizobium sp. associated to Medicago.
Bailly X, Olivieri I, De Mita S, Cleyet-Marel JC, Béna G., Mol Ecol 15(10), 2006
PMID: 16911196
Metabolite profiles of nodulated alfalfa plants indicate that distinct stages of nodule organogenesis are accompanied by global physiological adaptations.
Barsch A, Tellström V, Patschkowski T, Küster H, Niehaus K., Mol Plant Microbe Interact 19(9), 2006
PMID: 16941904
An integrated approach to functional genomics: construction of a novel reporter gene fusion library for Sinorhizobium meliloti.
Cowie A, Cheng J, Sibley CD, Fong Y, Zaheer R, Patten CL, Morton RM, Golding GB, Finan TM., Appl Environ Microbiol 72(11), 2006
PMID: 16963549
Rem, a new transcriptional activator of motility and chemotaxis in Sinorhizobium meliloti.
Rotter C, Mühlbacher S, Salamon D, Schmitt R, Scharf B., J Bacteriol 188(19), 2006
PMID: 16980496
Interrelations between glycine betaine catabolism and methionine biosynthesis in Sinorhizobium meliloti strain 102F34.
Barra L, Fontenelle C, Ermel G, Trautwetter A, Walker GC, Blanco C., J Bacteriol 188(20), 2006
PMID: 17015658
Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.
Chain PS, Denef VJ, Konstantinidis KT, Vergez LM, Agulló L, Reyes VL, Hauser L, Córdova M, Gómez L, González M, Land M, Lao V, Larimer F, LiPuma JJ, Mahenthiralingam E, Malfatti SA, Marx CJ, Parnell JJ, Ramette A, Richardson P, Seeger M, Smith D, Spilker T, Sul WJ, Tsoi TV, Ulrich LE, Zhulin IB, Tiedje JM., Proc Natl Acad Sci U S A 103(42), 2006
PMID: 17030797
Mapping the Sinorhizobium meliloti 1021 solute-binding protein-dependent transportome.
Mauchline TH, Fowler JE, East AK, Sartor AL, Zaheer R, Hosie AH, Poole PS, Finan TM., Proc Natl Acad Sci U S A 103(47), 2006
PMID: 17101990
Crystallization and preliminary crystallographic studies of the recombinant dihydropyrimidinase from Sinorhizobium meliloti CECT4114.
Martínez-Rodríguez S, González-Ramírez LA, Clemente-Jiménez JM, Rodríguez-Vico F, Las Heras-Vázquez FJ, Gavira JA, García-Ruíz JM., Acta Crystallogr Sect F Struct Biol Cryst Commun 62(pt 12), 2006
PMID: 17142902
Glutathione plays a fundamental role in growth and symbiotic capacity of Sinorhizobium meliloti.
Harrison J, Jamet A, Muglia CI, Van de Sype G, Aguilar OM, Puppo A, Frendo P., J Bacteriol 187(1), 2005
PMID: 15601700
The katA catalase gene is regulated by OxyR in both free-living and symbiotic Sinorhizobium meliloti.
Jamet A, Kiss E, Batut J, Puppo A, Hérouart D., J Bacteriol 187(1), 2005
PMID: 15601722
Vibrios commonly possess two chromosomes.
Okada K, Iida T, Kita-Tsukamoto K, Honda T., J Bacteriol 187(2), 2005
PMID: 15629946
Molecular cloning and biochemical characterization of L-N-carbamoylase from Sinorhizobium meliloti CECT4114.
Martínez-Rodríguez S, Clemente-Jiménez JM, Rodríguez-Vico F, Las Heras-Vázquez FJ., J Mol Microbiol Biotechnol 9(1), 2005
PMID: 16254442
One-component systems dominate signal transduction in prokaryotes.
Ulrich LE, Koonin EV, Zhulin IB., Trends Microbiol 13(2), 2005
PMID: 15680762
Defence of Rhizobium etli bacteroids against oxidative stress involves a complexly regulated atypical 2-Cys peroxiredoxin.
Dombrecht B, Heusdens C, Beullens S, Verreth C, Mulkers E, Proost P, Vanderleyden J, Michiels J., Mol Microbiol 55(4), 2005
PMID: 15686565
Protein domains and architectural innovation in plant-associated Proteobacteria.
Studholme DJ, Downie JA, Preston GM., BMC Genomics 6(), 2005
PMID: 15715905
Importance of unusually modified lipid A in Sinorhizobium stress resistance and legume symbiosis.
Ferguson GP, Datta A, Carlson RW, Walker GC., Mol Microbiol 56(1), 2005
PMID: 15773979
Dispersal and evolution of the Sinorhizobium meliloti group II RmInt1 intron in bacteria that interact with plants.
Fernández-López M, Muñoz-Adelantado E, Gillis M, Willems A, Toro N., Mol Biol Evol 22(6), 2005
PMID: 15814827
NodMutDB: a database for genes and mutants involved in symbiosis.
Mao C, Qiu J, Wang C, Charles TC, Sobral BW., Bioinformatics 21(12), 2005
PMID: 15817696
Two of the three groEL homologues in Rhizobium leguminosarum are dispensable for normal growth.
Rodríguez-Quiñones F, Maguire M, Wallington EJ, Gould PS, Yerko V, Downie JA, Lund PA., Arch Microbiol 183(4), 2005
PMID: 15830189
The sheathed flagellum of Brucella melitensis is involved in persistence in a murine model of infection.
Fretin D, Fauconnier A, Köhler S, Halling S, Léonard S, Nijskens C, Ferooz J, Lestrate P, Delrue RM, Danese I, Vandenhaute J, Tibor A, DeBolle X, Letesson JJ., Cell Microbiol 7(5), 2005
PMID: 15839898
Divided genomes: negotiating the cell cycle in prokaryotes with multiple chromosomes.
Egan ES, Fogel MA, Waldor MK., Mol Microbiol 56(5), 2005
PMID: 15882408
Role of oxyR from Sinorhizobium meliloti in regulating the expression of catalases.
Luo L, Qi MS, Yao SY, Cheng HP, Zhu JB, Yu GQ., Acta Biochim Biophys Sin (Shanghai) 37(6), 2005
PMID: 15944758
Signature proteins that are distinctive of alpha proteobacteria.
Kainth P, Gupta RS., BMC Genomics 6(), 2005
PMID: 15960851
Two new Sinorhizobium meliloti LysR-type transcriptional regulators required for nodulation.
Luo L, Yao SY, Becker A, Rüberg S, Yu GQ, Zhu JB, Cheng HP., J Bacteriol 187(13), 2005
PMID: 15968067
Pulsed-field gel electrophoresis to study the diversity of whole-genome organization in the genus Ochrobactrum.
Teyssier C, Marchandin H, Masnou A, Jeannot JL, de Buochberg MS, Jumas-Bilak E., Electrophoresis 26(15), 2005
PMID: 15995979
Comparative proteomics using 2-D gel electrophoresis and mass spectrometry as tools to dissect stimulons and regulons in bacteria with sequenced or partially sequenced genomes.
Encarnación S, Hernández M, Martínez-Batallar G, Contreras S, Vargas Mdel C, Mora J., Biol Proced Online 7(), 2005
PMID: 16145578
Systematic targeted mutagenesis of Brucella melitensis 16M reveals a major role for GntR regulators in the control of virulence.
Haine V, Sinon A, Van Steen F, Rousseau S, Dozot M, Lestrate P, Lambert C, Letesson JJ, De Bolle X., Infect Immun 73(9), 2005
PMID: 16113274
Phosphorus-free membrane lipids of Sinorhizobium meliloti are not required for the symbiosis with alfalfa but contribute to increased cell yields under phosphorus-limiting conditions of growth.
López-Lara IM, Gao JL, Soto MJ, Solares-Pérez A, Weissenmayer B, Sohlenkamp C, Verroios GP, Thomas-Oates J, Geiger O., Mol Plant Microbe Interact 18(9), 2005
PMID: 16167767
Genome reduction in the alpha-Proteobacteria.
Sällström B, Andersson SG., Curr Opin Microbiol 8(5), 2005
PMID: 16099701
Development of a functional genomics platform for Sinorhizobium meliloti: construction of an ORFeome.
Schroeder BK, House BL, Mortimer MW, Yurgel SN, Maloney SC, Ward KL, Kahn ML., Appl Environ Microbiol 71(10), 2005
PMID: 16204497
Role of the regulatory gene rirA in the transcriptional response of Sinorhizobium meliloti to iron limitation.
Chao TC, Buhrmester J, Hansmeier N, Pühler A, Weidner S., Appl Environ Microbiol 71(10), 2005
PMID: 16204511
Evolutionary, structural and functional relationships revealed by comparative analysis of syntenic genes in Rhizobiales.
Guerrero G, Peralta H, Aguilar A, Díaz R, Villalobos MA, Medrano-Soto A, Mora J., BMC Evol Biol 5(), 2005
PMID: 16229745
Diversification of DNA sequences in the symbiotic genome of Rhizobium etli.
Flores M, Morales L, Avila A, González V, Bustos P, García D, Mora Y, Guo X, Collado-Vides J, Piñero D, Dávila G, Mora J, Palacios R., J Bacteriol 187(21), 2005
PMID: 16237002
Identification of the rctA gene, which is required for repression of conjugative transfer of rhizobial symbiotic megaplasmids.
Pérez-Mendoza D, Sepúlveda E, Pando V, Muñoz S, Nogales J, Olivares J, Soto MJ, Herrera-Cervera JA, Romero D, Brom S, Sanjuán J., J Bacteriol 187(21), 2005
PMID: 16237017
Medicago-Sinorhizobium symbiotic specificity evolution and the geographic expansion of Medicago.
Béna G, Lyet A, Huguet T, Olivieri I., J Evol Biol 18(6), 2005
PMID: 16313467
Large-scale genetic variation of the symbiosis-required megaplasmid pSymA revealed by comparative genomic analysis of Sinorhizobium meliloti natural strains.
Giuntini E, Mengoni A, De Filippo C, Cavalieri D, Aubin-Horth N, Landry CR, Becker A, Bazzicalupo M., BMC Genomics 6(), 2005
PMID: 16283928
sinI- and expR-dependent quorum sensing in Sinorhizobium meliloti.
Gao M, Chen H, Eberhard A, Gronquist MR, Robinson JB, Rolfe BG, Bauer WD., J Bacteriol 187(23), 2005
PMID: 16291666
Characterization of a unique chromosomal copper resistance gene cluster from Xanthomonas campestris pv. vesicatoria.
Basim H, Minsavage GV, Stall RE, Wang JF, Shanker S, Jones JB., Appl Environ Microbiol 71(12), 2005
PMID: 16332814
Proteomics as a tool to monitor plant-microbe endosymbioses in the rhizosphere.
Bestel-Corre G, Dumas-Gaudot E, Gianinazzi S., Mycorrhiza 14(1), 2004
PMID: 14625704
Chlamydomonas reinhardtii secretes compounds that mimic bacterial signals and interfere with quorum sensing regulation in bacteria.
Teplitski M, Chen H, Rajamani S, Gao M, Merighi M, Sayre RT, Robinson JB, Rolfe BG, Bauer WD., Plant Physiol 134(1), 2004
PMID: 14671013
Flavonoids induce temporal shifts in gene-expression of nod-box controlled loci in Rhizobium sp. NGR234.
Kobayashi H, Naciri-Graven Y, Broughton WJ, Perret X., Mol Microbiol 51(2), 2004
PMID: 14756776
Probing for pH-regulated genes in Sinorhizobium medicae using transcriptional analysis.
Tiwari RP, Reeve WG, Fenner BJ, Dilworth MJ, Glenn AR, Howieson JG., J Mol Microbiol Biotechnol 7(3), 2004
PMID: 15263817
An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain NGR234.
Streit WR, Schmitz RA, Perret X, Staehelin C, Deakin WJ, Raasch C, Liesegang H, Broughton WJ., J Bacteriol 186(2), 2004
PMID: 14702322
Molecular cloning, purification, and biochemical characterization of hydantoin racemase from the legume symbiont Sinorhizobium meliloti CECT 4114.
Martínez-Rodríguez S, Las Heras-Vázquez FJ, Mingorance-Cazorla L, Clemente-Jiménez JM, Rodríguez-Vico F., Appl Environ Microbiol 70(1), 2004
PMID: 14711700
Molecular evolution of FtsZ protein sequences encoded within the genomes of archaea, bacteria, and eukaryota.
Vaughan S, Wickstead B, Gull K, Addinall SG., J Mol Evol 58(1), 2004
PMID: 14743312
Regulation of L-alanine dehydrogenase in Rhizobium leguminosarum bv. viciae and its role in pea nodules.
Lodwig E, Kumar S, Allaway D, Bourdes A, Prell J, Priefer U, Poole P., J Bacteriol 186(3), 2004
PMID: 14729712
A bacterial cell-cell communication signal with cross-kingdom structural analogues.
Wang LH, He Y, Gao Y, Wu JE, Dong YH, He C, Wang SX, Weng LX, Xu JL, Tay L, Fang RX, Zhang LH., Mol Microbiol 51(3), 2004
PMID: 14731288
Global changes in gene expression in Sinorhizobium meliloti 1021 under microoxic and symbiotic conditions.
Becker A, Bergès H, Krol E, Bruand C, Rüberg S, Capela D, Lauber E, Meilhoc E, Ampe F, de Bruijn FJ, Fourment J, Francez-Charlot A, Kahn D, Küster H, Liebe C, Pühler A, Weidner S, Batut J., Mol Plant Microbe Interact 17(3), 2004
PMID: 15000396
Phylogenetic analyses of symbiotic nodulation genes support vertical and lateral gene co-transfer within the Bradyrhizobium genus.
Moulin L, Béna G, Boivin-Masson C, Stepkowski T., Mol Phylogenet Evol 30(3), 2004
PMID: 15012950
Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula.
Küster H, Hohnjec N, Krajinski F, El YF, Manthey K, Gouzy J, Dondrup M, Meyer F, Kalinowski J, Brechenmacher L, van Tuinen D, Gianinazzi-Pearson V, Pühler A, Gamas P, Becker A., J Biotechnol 108(2), 2004
PMID: 15129719
Sinorhizobium meliloti RpoH1 is required for effective nitrogen-fixing symbiosis with alfalfa.
Mitsui H, Sato T, Sato Y, Ito N, Minamisawa K., Mol Genet Genomics 271(4), 2004
PMID: 15007732
Similarity to peroxisomal-membrane protein family reveals that Sinorhizobium and Brucella BacA affect lipid-A fatty acids.
Ferguson GP, Datta A, Baumgartner J, Roop RM, Carlson RW, Walker GC., Proc Natl Acad Sci U S A 101(14), 2004
PMID: 15044696
What can bacterial genome research teach us about bacteria-plant interactions?
Pühler A, Arlat M, Becker A, Göttfert M, Morrissey JP, O'Gara F., Curr Opin Plant Biol 7(2), 2004
PMID: 15003213
Root nodule Bradyrhizobium spp. harbor tfdAalpha and cadA, homologous with genes encoding 2,4-dichlorophenoxyacetic acid-degrading proteins.
Itoh K, Tashiro Y, Uobe K, Kamagata Y, Suyama K, Yamamoto H., Appl Environ Microbiol 70(4), 2004
PMID: 15066803
Host cell modulation by human, animal and plant pathogens.
Andersson SG, Kempf VA., Int J Med Microbiol 293(7-8), 2004
PMID: 15149019
Genomic islands in pathogenic and environmental microorganisms.
Dobrindt U, Hochhut B, Hentschel U, Hacker J., Nat Rev Microbiol 2(5), 2004
PMID: 15100694
Incompatibility and the partitioning site of the repABC basic replicon of the symbiotic plasmid from Rhizobium etli.
Soberón N, Venkova-Canova T, Ramírez-Romero MA, Téllez-Sosa J, Cevallos MA., Plasmid 51(3), 2004
PMID: 15109827
New recombination methods for Sinorhizobium meliloti genetics.
House BL, Mortimer MW, Kahn ML., Appl Environ Microbiol 70(5), 2004
PMID: 15128536
Genome organization and localization of the pufLM genes of the photosynthesis reaction center in phylogenetically diverse marine Alphaproteobacteria.
Pradella S, Allgaier M, Hoch C, Päuker O, Stackebrandt E, Wagner-Döbler I., Appl Environ Microbiol 70(6), 2004
PMID: 15184132
Phylogenetic clusters of rhizobia revealed by genome structures.
Zheng J, Liu G, Zhu W, Zhou Y, Liu S., Sci China C Life Sci 47(3), 2004
PMID: 15524284
Computational inference of scenarios for alpha-proteobacterial genome evolution.
Boussau B, Karlberg EO, Frank AC, Legault BA, Andersson SG., Proc Natl Acad Sci U S A 101(26), 2004
PMID: 15210995
Sinorhizobium medicae genes whose regulation involves the ActS and/or ActR signal transduction proteins.
Fenner BJ, Tiwari RP, Reeve WG, Dilworth MJ, Glenn AR., FEMS Microbiol Lett 236(1), 2004
PMID: 15212786
Computational identification and characterization of novel genes from legumes.
Graham MA, Silverstein KA, Cannon SB, VandenBosch KA., Plant Physiol 135(3), 2004
PMID: 15266052
Comprehensive metabolite profiling of Sinorhizobium meliloti using gas chromatography-mass spectrometry.
Barsch A, Patschkowski T, Niehaus K., Funct Integr Genomics 4(4), 2004
PMID: 15372312
Morphological and functional asymmetry in alpha-proteobacteria.
Hallez R, Bellefontaine AF, Letesson JJ, De Bolle X., Trends Microbiol 12(8), 2004
PMID: 15276611
Different patterns of evolution for duplicated DNA repair genes in bacteria of the Xanthomonadales group.
Martins-Pinheiro M, Galhardo RS, Lage C, Lima-Bessa KM, Aires KA, Menck CF., BMC Evol Biol 4(), 2004
PMID: 15333143
Identification of functional mob regions in Rhizobium etli: evidence for self-transmissibility of the symbiotic plasmid pRetCFN42d.
Pérez-Mendoza D, Domínguez-Ferreras A, Muñoz S, Soto MJ, Olivares J, Brom S, Girard L, Herrera-Cervera JA, Sanjuán J., J Bacteriol 186(17), 2004
PMID: 15317780
The Sinorhizobium meliloti ABC transporter Cho is highly specific for choline and expressed in bacteroids from Medicago sativa nodules.
Dupont L, Garcia I, Poggi MC, Alloing G, Mandon K, Le Rudulier D., J Bacteriol 186(18), 2004
PMID: 15342567
TtsI, a key regulator of Rhizobium species NGR234 is required for type III-dependent protein secretion and synthesis of rhamnose-rich polysaccharides.
Marie C, Deakin WJ, Ojanen-Reuhs T, Diallo E, Reuhs B, Broughton WJ, Perret X., Mol Plant Microbe Interact 17(9), 2004
PMID: 15384486
Wide-range transcriptional modulating effect of ntrR under microaerobiosis in Sinorhizobium meliloti.
Puskás LG, Nagy ZB, Kelemen JZ, Rüberg S, Bodogai M, Becker A, Dusha I., Mol Genet Genomics 272(3), 2004
PMID: 15365818
Dicarboxylate transport by rhizobia.
Yurgel SN, Kahn ML., FEMS Microbiol Rev 28(4), 2004
PMID: 15374663
Symbiotic phenotypes and translocated effector proteins of the Mesorhizobium loti strain R7A VirB/D4 type IV secretion system.
Hubber A, Vergunst AC, Sullivan JT, Hooykaas PJ, Ronson CW., Mol Microbiol 54(2), 2004
PMID: 15469524
Alkylation damage in DNA and RNA--repair mechanisms and medical significance.
Drabløs F, Feyzi E, Aas PA, Vaagbø CB, Kavli B, Bratlie MS, Peña-Diaz J, Otterlei M, Slupphaug G, Krokan HE., DNA Repair (Amst) 3(11), 2004
PMID: 15380096
A novel genetic locus outside the symbiotic island is required for effective symbiosis of Bradyrhizobium japonicum with soybean Glycine max.
Becker BU, Bonnard N, Boiffin V, Mörschel E, Tresierra A, Müller P., Res Microbiol 155(9), 2004
PMID: 15501655
A dual-genome Symbiosis Chip for coordinate study of signal exchange and development in a prokaryote-host interaction.
Barnett MJ, Toman CJ, Fisher RF, Long SR., Proc Natl Acad Sci U S A 101(47), 2004
PMID: 15542588
The evolution of chronic infection strategies in the alpha-proteobacteria.
Batut J, Andersson SG, O'Callaghan D., Nat Rev Microbiol 2(12), 2004
PMID: 15550939
Two discrete elements are required for the replication of a repABC plasmid: an antisense RNA and a stem-loop structure.
Venkova-Canova T, Soberón NE, Ramírez-Romero MA, Cevallos MA., Mol Microbiol 54(5), 2004
PMID: 15554980
A genetic locus necessary for rhamnose uptake and catabolism in Rhizobium leguminosarum bv. trifolii.
Richardson JS, Hynes MF, Oresnik IJ., J Bacteriol 186(24), 2004
PMID: 15576793
Quorum sensing controls exopolysaccharide production in Sinorhizobium meliloti.
Marketon MM, Glenn SA, Eberhard A, González JE., J Bacteriol 185(1), 2003
PMID: 12486070
BacS: an abundant bacteroid protein in Rhizobium etli whose expression ex planta requires nifA.
Jahn OJ, Davila G, Romero D, Noel KD., Mol Plant Microbe Interact 16(1), 2003
PMID: 12580283
Mutations in sit B and sit D genes affect manganese-growth requirements in Sinorhizobium meliloti.
Platero RA, Jaureguy M, Battistoni FJ, Fabiano ER., FEMS Microbiol Lett 218(1), 2003
PMID: 12583899
A novel aldo-keto reductase from Escherichia coli can increase resistance to methylglyoxal toxicity.
Grant AW, Steel G, Waugh H, Ellis EM., FEMS Microbiol Lett 218(1), 2003
PMID: 12583903
On the origin of mitochondria: a genomics perspective.
Andersson SG, Karlberg O, Canbäck B, Kurland CG., Philos Trans R Soc Lond B Biol Sci 358(1429), 2003
PMID: 12594925
Soft rot erwiniae: from genes to genomes.
Toth IK, Bell KS, Holeva MC, Birch PRJ., Mol Plant Pathol 4(1), 2003
PMID: IND23318490
Proteomic analysis of legume-microbe interactions.
Rolfe BG, Mathesius U, Djordjevic M, Weinman J, Hocart C, Weiller G, Bauer WD., Comp Funct Genomics 4(2), 2003
PMID: 18629116
Diversity of group II introns in the genome of Sinorhizobium meliloti strain 1021: splicing and mobility of RmInt1.
Toro N, Martínez-Abarca F, Fernández-López M, Muñoz-Adelantado E., Mol Genet Genomics 268(5), 2003
PMID: 12589437
Characterization of the nodulation plasmid encoded chemoreceptor gene mcpG from Rhizobium leguminosarum.
Yost CK, Clark KT, Del Bel KL, Hynes MF., BMC Microbiol 3(), 2003
PMID: 12553885
Transcriptome analysis of Sinorhizobium meliloti during symbiosis.
Ampe F, Kiss E, Sabourdy F, Batut J., Genome Biol 4(2), 2003
PMID: 12620125
Development of Sinorhizobium meliloti pilot macroarrays for transcriptome analysis.
Bergès H, Lauber E, Liebe C, Batut J, Kahn D, de Bruijn FJ, Ampe F., Appl Environ Microbiol 69(2), 2003
PMID: 12571049
Genetic analysis of a pH-regulated operon from Rhizobium tropici CIAT899 involved in acid tolerance and nodulation competitiveness.
Vinuesa P, Neumann-Silkow F, Pacios-Bras C, Spaink HP, Martínez-Romero E, Werner D., Mol Plant Microbe Interact 16(2), 2003
PMID: 12575750
Sinorhizobium americanus sp. nov., a new Sinorhizobium species nodulating native Acacia spp. in Mexico.
Toledo I, Lloret L, Martínez-Romero E., Syst Appl Microbiol 26(1), 2003
PMID: 12747410
Identification of a third sulfate activation system in Sinorhizobium sp. strain BR816: the CysDN sulfate activation complex.
Snoeck C, Verreth C, Hernández-Lucas I, Martínez-Romero E, Vanderleyden J., Appl Environ Microbiol 69(4), 2003
PMID: 12676676
Genomics insights into symbiotic nitrogen fixation.
Weidner S, Pühler A, Küster H., Curr Opin Biotechnol 14(2), 2003
PMID: 12732321
Proteomic analysis of legume-microbe interactions.
Rolfe BG, Mathesius U, Djordjevic M, Weinman J, Hocart C, Weiller G, Dietz Bauer W., Comp Funct Genomics 4(2), 2003
PMID: C1227
Enhanced bioremediation of soil containing 2,4-dinitrotoluene by a genetically modified Sinorhizobium meliloti.
Dutta SK, Hollowell GP, Hashem FM, Kuykendall LD., Soil Biol Biochem 35(5), 2003
PMID: IND23340569
The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments.
González V, Bustos P, Ramírez-Romero MA, Medrano-Soto A, Salgado H, Hernández-González I, Hernández-Celis JC, Quintero V, Moreno-Hagelsieb G, Girard L, Rodríguez O, Flores M, Cevallos MA, Collado-Vides J, Romero D, Dávila G., Genome Biol 4(6), 2003
PMID: 12801410
Predicting gene expression levels from codon biases in alpha-proteobacterial genomes.
Karlin S, Barnett MJ, Campbell AM, Fisher RF, Mrazek J., Proc Natl Acad Sci U S A 100(12), 2003
PMID: 12775761
The twin-arginine translocation (Tat) system is essential for Rhizobium-legume symbiosis.
Meloni S, Rey L, Sidler S, Imperial J, Ruiz-Argüeso T, Palacios JM., Mol Microbiol 48(5), 2003
PMID: 12787349
A global analysis of protein expression profiles in Sinorhizobium meliloti: discovery of new genes for nodule occupancy and stress adaptation.
Djordjevic MA, Chen HC, Natera S, Van Noorden G, Menzel C, Taylor S, Renard C, Geiger O, Weiller GF, Sinorhizobium DNA Sequencing Consortium., Mol Plant Microbe Interact 16(6), 2003
PMID: 12795377
Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts.
Sawada H, Kuykendall LD, Young JM., J Gen Appl Microbiol 49(3), 2003
PMID: 12949698
Identification and characterization of transposable elements of Paracoccus pantotrophus.
Bartosik D, Sochacka M, Baj J., J Bacteriol 185(13), 2003
PMID: 12813068
Striking complexity of lipopolysaccharide defects in a collection of Sinorhizobium meliloti mutants.
Campbell GR, Sharypova LA, Scheidle H, Jones KM, Niehaus K, Becker A, Walker GC., J Bacteriol 185(13), 2003
PMID: 12813079
Prophages and bacterial genomics: what have we learned so far?
Casjens S., Mol Microbiol 49(2), 2003
PMID: 12886937
Expression cloning and biochemical characterization of a Rhizobium leguminosarum lipid A 1-phosphatase.
Karbarz MJ, Kalb SR, Cotter RJ, Raetz CR., J Biol Chem 278(41), 2003
PMID: 12869541
Cytochrome p450 complement (CYPome) of the avermectin-producer Streptomyces avermitilis and comparison to that of Streptomyces coelicolor A3(2).
Lamb DC, Ikeda H, Nelson DR, Ishikawa J, Skaug T, Jackson C, Omura S, Waterman MR, Kelly SL., Biochem Biophys Res Commun 307(3), 2003
PMID: 12893267
Natural genomic design in Sinorhizobium meliloti: novel genomic architectures.
Guo X, Flores M, Mavingui P, Fuentes SI, Hernández G, Dávila G, Palacios R., Genome Res 13(8), 2003
PMID: 12902376
The Sinorhizobium meliloti glycine betaine biosynthetic genes (betlCBA) are induced by choline and highly expressed in bacteroids.
Mandon K, Osterås M, Boncompagni E, Trinchant JC, Spennato G, Poggi MC, Le Rudulier D., Mol Plant Microbe Interact 16(8), 2003
PMID: 12906115
Identification of extracytoplasmic proteins in Bradyrhizobium japonicum using phage display.
Rosander A, Frykberg L, Ausmees N, Müller P., Mol Plant Microbe Interact 16(8), 2003
PMID: 12906117
Characterization of Nops, nodulation outer proteins, secreted via the type III secretion system of NGR234.
Marie C, Deakin WJ, Viprey V, Kopciñska J, Golinowski W, Krishnan HB, Perret X, Broughton WJ., Mol Plant Microbe Interact 16(9), 2003
PMID: 12971597
Enzyme-specific profiles for genome annotation: PRIAM.
Claudel-Renard C, Chevalet C, Faraut T, Kahn D., Nucleic Acids Res 31(22), 2003
PMID: 14602924
Legume symbiotic nitrogen fixation by beta-proteobacteria is widespread in nature.
Chen WM, Moulin L, Bontemps C, Vandamme P, Béna G, Boivin-Masson C., J Bacteriol 185(24), 2003
PMID: 14645288
EMMA: a platform for consistent storage and efficient analysis of microarray data.
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Pühler A, Meyer F., J Biotechnol 106(2-3), 2003
PMID: 14651856
Building a BRIDGE for the integration of heterogeneous data from functional genomics into a platform for systems biology.
Goesmann A, Linke B, Rupp O, Krause L, Bartels D, Dondrup M, McHardy AC, Wilke A, Pühler A, Meyer F., J Biotechnol 106(2-3), 2003
PMID: 14651858
Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression.
Rüberg S, Tian ZX, Krol E, Linke B, Meyer F, Wang Y, Pühler A, Weidner S, Becker A., J Biotechnol 106(2-3), 2003
PMID: 14651866
Glucose 6-phosphate dehydrogenase is required for sucrose and trehalose to be efficient osmoprotectants in Sinorhizobium meliloti.
Barra L, Pica N, Gouffi K, Walker GC, Blanco C, Trautwetter A., FEMS Microbiol Lett 229(2), 2003
PMID: 14680697
Dynamics of genome architecture in Rhizobium sp. strain NGR234.
Mavingui P, Flores M, Guo X, Dávila G, Perret X, Broughton WJ, Palacios R., J Bacteriol 184(1), 2002
PMID: 11741857
Genome sequence of the plant pathogen Ralstonia solanacearum.
Salanoubat M, Genin S, Artiguenave F, Gouzy J, Mangenot S, Arlat M, Billault A, Brottier P, Camus JC, Cattolico L, Chandler M, Choisne N, Claudel-Renard C, Cunnac S, Demange N, Gaspin C, Lavie M, Moisan A, Robert C, Saurin W, Schiex T, Siguier P, Thébault P, Whalen M, Wincker P, Levy M, Weissenbach J, Boucher CA., Nature 415(6871), 2002
PMID: 11823852
dpp genes of Rhizobium leguminosarum specify uptake of delta-aminolevulinic acid.
Carter RA, Yeoman KH, Klein A, Hosie AH, Sawers G, Poole PS, Johnston AW., Mol Plant Microbe Interact 15(1), 2002
PMID: 11858173
Differentiation of plant cells during symbiotic nitrogen fixation.
Trevaskis B, Colebatch G, Desbrosses G, Wandrey M, Wienkoop S, Saalbach G, Udvardi M., Comp Funct Genomics 3(2), 2002
PMID: 18628847
Sequencing and analysis of a 63 kb bacterial artificial chromosome insert from the Wolbachia endosymbiont of the human filarial parasite Brugia malayi.
Ware J, Moran L, Foster J, Posfai J, Vincze T, Guiliano D, Blaxter M, Eisen J, Slatko B., Int J Parasitol 32(2), 2002
PMID: 11812492
raiIR genes are part of a quorum-sensing network controlled by cinI and cinR in Rhizobium leguminosarum.
Wisniewski-Dyé F, Jones J, Chhabra SR, Downie JA., J Bacteriol 184(6), 2002
PMID: 11872711
Rhizobium tropici genes involved in free-living salt tolerance are required for the establishment of efficient nitrogen-fixing symbiosis with Phaseolus vulgaris.
Nogales J, Campos R, BenAbdelkhalek H, Olivares J, Lluch C, Sanjuan J., Mol Plant Microbe Interact 15(3), 2002
PMID: 11952125
Biodiversity: microbial genomes multiply.
Doolittle RF., Nature 416(6882), 2002
PMID: 11961543
Differentiation of plant cells during symbiotic nitrogen fixation.
Trevaskis B, Colebatch G, Desbrosses G, Wandrey M, Wienkoop S, Saalbach G, Udvardi M., Comp Funct Genomics 3(2), 2002
PMID: C1140
Comparative genomic analysis of plant-associated bacteria.
Van Sluys MA, Monteiro-Vitorello CB, Camargo LE, Menck CF, Da Silva AC, Ferro JA, Oliveira MC, Setubal JC, Kitajima JP, Simpson AJ., Annu Rev Phytopathol 40(), 2002
PMID: 12147758
Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A.
Sullivan JT, Trzebiatowski JR, Cruickshank RW, Gouzy J, Brown SD, Elliot RM, Fleetwood DJ, McCallum NG, Rossbach U, Stuart GS, Weaver JE, Webby RJ, De Bruijn FJ, Ronson CW., J Bacteriol 184(11), 2002
PMID: 12003951
The vbs genes that direct synthesis of the siderophore vicibactin in Rhizobium leguminosarum: their expression in other genera requires ECF sigma factor RpoI.
Carter RA, Worsley PS, Sawers G, Challis GL, Dilworth MJ, Carson KC, Lawrence JA, Wexler M, Johnston AW, Yeoman KH., Mol Microbiol 44(5), 2002
PMID: 12028377
Functional analysis of Sinorhizobium meliloti genes involved in biotin synthesis and transport.
Entcheva P, Phillips DA, Streit WR., Appl Environ Microbiol 68(6), 2002
PMID: 12039741
Key role of bacterial NH(4)(+) metabolism in Rhizobium-plant symbiosis.
Patriarca EJ, Tatè R, Iaccarino M., Microbiol Mol Biol Rev 66(2), 2002
PMID: 12040124
Bacterial evolution: chromosome arithmetic and geometry.
Ochman H., Curr Biol 12(12), 2002
PMID: 12123594
Gene cluster for ferric iron uptake in Agrobacterium tumefaciens MAFF301001.
Sonoda H, Suzuki K, Yoshida K., Genes Genet Syst 77(3), 2002
PMID: 12207035
Identification of two quorum-sensing systems in Sinorhizobium meliloti.
Marketon MM, González JE., J Bacteriol 184(13), 2002
PMID: 12057940
The Rhizobium etli cyaC product: characterization of a novel adenylate cyclase class.
Téllez-Sosa J, Soberón N, Vega-Segura A, Torres-Márquez ME, Cevallos MA., J Bacteriol 184(13), 2002
PMID: 12057950
A LuxR homolog controls production of symbiotically active extracellular polysaccharide II by Sinorhizobium meliloti.
Pellock BJ, Teplitski M, Boinay RP, Bauer WD, Walker GC., J Bacteriol 184(18), 2002
PMID: 12193623
Role of tfxE, but not tfxG, in trifolitoxin resistance.
Scupham AJ, Dong Y, Triplett EW., Appl Environ Microbiol 68(9), 2002
PMID: 12200284
Diversity of Sinorhizobium meliloti from the Central Asian Alfalfa Gene Center.
Roumiantseva ML, Andronov EE, Sharypova LA, Dammann-Kalinowski T, Keller M, Young JP, Simarov BV., Appl Environ Microbiol 68(9), 2002
PMID: 12200335
Engineering bacterial competitiveness and persistence in the phytosphere.
Savka MA, Dessaux Y, Oger P, Rossbach S., Mol Plant Microbe Interact 15(9), 2002
PMID: 12236593
Rhizobium etli CFN42 contains at least three plasmids of the repABC family: a structural and evolutionary analysis.
Cevallos MA, Porta H, Izquierdo J, Tun-Garrido C, García-de-los-Santos A, Dávila G, Brom S., Plasmid 48(2), 2002
PMID: 12383728
The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.
Paulsen IT, Seshadri R, Nelson KE, Eisen JA, Heidelberg JF, Read TD, Dodson RJ, Umayam L, Brinkac LM, Beanan MJ, Daugherty SC, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Nelson WC, Ayodeji B, Kraul M, Shetty J, Malek J, Van Aken SE, Riedmuller S, Tettelin H, Gill SR, White O, Salzberg SL, Hoover DL, Lindler LE, Halling SM, Boyle SM, Fraser CM., Proc Natl Acad Sci U S A 99(20), 2002
PMID: 12271122
Characterization of the Sinorhizobium meliloti sinR/sinI locus and the production of novel N-acyl homoserine lactones.
Marketon MM, Gronquist MR, Eberhard A, González JE., J Bacteriol 184(20), 2002
PMID: 12270827
Genome-wide identification of nodule-specific transcripts in the model legume Medicago truncatula.
Fedorova M, van de Mortel J, Matsumoto PA, Cho J, Town CD, VandenBosch KA, Gantt JS, Vance CP., Plant Physiol 130(2), 2002
PMID: 12376622
Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis.
Heidelberg JF, Paulsen IT, Nelson KE, Gaidos EJ, Nelson WC, Read TD, Eisen JA, Seshadri R, Ward N, Methe B, Clayton RA, Meyer T, Tsapin A, Scott J, Beanan M, Brinkac L, Daugherty S, DeBoy RT, Dodson RJ, Durkin AS, Haft DH, Kolonay JF, Madupu R, Peterson JD, Umayam LA, White O, Wolf AM, Vamathevan J, Weidman J, Impraim M, Lee K, Berry K, Lee C, Mueller J, Khouri H, Gill J, Utterback TR, McDonald LA, Feldblyum TV, Smith HO, Venter JC, Nealson KH, Fraser CM., Nat Biotechnol 20(11), 2002
PMID: 12368813
Ecological and molecular maintenance strategies of mobile genetic elements.
Turner SL, Bailey MJ, Lilley AK, Thomas CM., FEMS Microbiol Ecol 42(2), 2002
PMID: 19709277
Identification and analysis of rhizobial plasmid origins of transfer.
Turner SL, Knight KA, Young JP., FEMS Microbiol Ecol 42(2), 2002
PMID: 19709282
Prediction and overview of the RpoN-regulon in closely related species of the Rhizobiales.
Dombrecht B, Marchal K, Vanderleyden J, Michiels J., Genome Biol 3(12), 2002
PMID: 12537565
Fun stories about Brucella: the "furtive nasty bug".
Letesson JJ, Lestrate P, Delrue RM, Danese I, Bellefontaine F, Fretin D, Taminiau B, Tibor A, Dricot A, Deschamps C, Haine V, Leonard S, Laurent T, Mertens P, Vandenhaute J, De Bolle X., Vet Microbiol 90(1-4), 2002
PMID: 12414152
Regulation of Brucella virulence by the two-component system BvrR/BvrS.
López-Goñi I, Guzmán-Verri C, Manterola L, Sola-Landa A, Moriyón I, Moreno E., Vet Microbiol 90(1-4), 2002
PMID: 12414153
Identification of an iron-regulated, hemin-binding outer membrane protein in Sinorhizobium meliloti.
Battistoni F, Platero R, Duran R, Cerveñansky C, Battistoni J, Arias A, Fabiano E., Appl Environ Microbiol 68(12), 2002
PMID: 12450806
Mutational and transcriptional analysis of the type III secretion system of Bradyrhizobium japonicum.
Krause A, Doerfel A, Göttfert M., Mol Plant Microbe Interact 15(12), 2002
PMID: 12481995
Ordered cosmid library of the Mesorhizobium loti MAFF303099 genome for systematic gene disruption and complementation analysis.
Hattori Y, Omori H, Hanyu M, Kaseda N, Mishima E, Kaneko T, Tabata S, Saeki K., Plant Cell Physiol 43(12), 2002
PMID: 12514252
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440.
Jiménez JI, Miñambres B, García JL, Díaz E., Environ Microbiol 4(12), 2002
PMID: 12534466
Species-specific protein sequence and fold optimizations.
Dumontier M, Michalickova K, Hogue CW., BMC Bioinformatics 3(), 2002
PMID: 12487631
Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021.
Capela D, Barloy-Hubler F, Gouzy J, Bothe G, Ampe F, Batut J, Boistard P, Becker A, Boutry M, Cadieu E, Dréano S, Gloux S, Godrie T, Goffeau A, Kahn D, Kiss E, Lelaure V, Masuy D, Pohl T, Portetelle D, Pühler A, Purnelle B, Ramsperger U, Renard C, Thébault P, Vandenbol M, Weidner S, Galibert F., Proc Natl Acad Sci U S A 98(17), 2001
PMID: 11481430
The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti.
Finan TM, Weidner S, Wong K, Buhrmester J, Chain P, Vorhölter FJ, Hernandez-Lucas I, Becker A, Cowie A, Gouzy J, Golding B, Pühler A., Proc Natl Acad Sci U S A 98(17), 2001
PMID: 11481431
Nucleotide sequence and predicted functions of the entire Sinorhizobium meliloti pSymA megaplasmid.
Barnett MJ, Fisher RF, Jones T, Komp C, Abola AP, Barloy-Hubler F, Bowser L, Capela D, Galibert F, Gouzy J, Gurjal M, Hong A, Huizar L, Hyman RW, Kahn D, Kahn ML, Kalman S, Keating DH, Palm C, Peck MC, Surzycki R, Wells DH, Yeh KC, Davis RW, Federspiel NA, Long SR., Proc Natl Acad Sci U S A 98(17), 2001
PMID: 11481432
Genome sequencing. The ABC of symbiosis.
Downie JA, Young JP., Nature 412(6847), 2001
PMID: 11493903
The full monty.
Thomson N, Holden M, Sebaihia M, Cerdeño-Tárraga A, Parkhill J., Trends Microbiol 9(9), 2001
PMID: 11553433

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