Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103

Weidner S, Becker A, Bonilla I, Jaenicke S, Lloret J, Margaret I, Pühler A, Ruiz-Sainz JE, Schneiker-Bekel S, Szczepanowski R, Vinardell JM, et al. (2012)
Journal of Bacteriology 194(6): 1617-1618.

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DOI
Autor*in
Weidner, StefanUniBi; Becker, A.; Bonilla, I.; Jaenicke, SebastianUniBi; Lloret, J.; Margaret, I.; Pühler, AlfredUniBi ; Ruiz-Sainz, J. E.; Schneiker-Bekel, SusanneUniBi; Szczepanowski, R.; Vinardell, J. M.; Zehner, S.
Alle
Einrichtung
Centrum für Biotechnologie > Institut für Bioinformatik
Centrum für Biotechnologie > Arbeitsgruppe A. Pühler
Centrum für Biotechnologie > Arbeitsgruppe A. Goesmann
Centrum für Biotechnologie > Institut für Genomforschung und Systembiologie
Erscheinungsjahr
2012
Zeitschriftentitel
Journal of Bacteriology
Band
194
Ausgabe
6
Seite(n)
1617-1618
ISSN
0021-9193
Page URI
https://pub.uni-bielefeld.de/record/2473849

Zitieren

Weidner S, Becker A, Bonilla I, et al. Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103. Journal of Bacteriology. 2012;194(6):1617-1618.
Weidner, S., Becker, A., Bonilla, I., Jaenicke, S., Lloret, J., Margaret, I., Pühler, A., et al. (2012). Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103. Journal of Bacteriology, 194(6), 1617-1618. doi:10.1128/JB.06729-11
Weidner, Stefan, Becker, A., Bonilla, I., Jaenicke, Sebastian, Lloret, J., Margaret, I., Pühler, Alfred, et al. 2012. “Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103”. Journal of Bacteriology 194 (6): 1617-1618.
Weidner, S., Becker, A., Bonilla, I., Jaenicke, S., Lloret, J., Margaret, I., Pühler, A., Ruiz-Sainz, J. E., Schneiker-Bekel, S., Szczepanowski, R., et al. (2012). Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103. Journal of Bacteriology 194, 1617-1618.
Weidner, S., et al., 2012. Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103. Journal of Bacteriology, 194(6), p 1617-1618.
S. Weidner, et al., “Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103”, Journal of Bacteriology, vol. 194, 2012, pp. 1617-1618.
Weidner, S., Becker, A., Bonilla, I., Jaenicke, S., Lloret, J., Margaret, I., Pühler, A., Ruiz-Sainz, J.E., Schneiker-Bekel, S., Szczepanowski, R., Vinardell, J.M., Zehner, S., Göttfert, M.: Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103. Journal of Bacteriology. 194, 1617-1618 (2012).
Weidner, Stefan, Becker, A., Bonilla, I., Jaenicke, Sebastian, Lloret, J., Margaret, I., Pühler, Alfred, Ruiz-Sainz, J. E., Schneiker-Bekel, Susanne, Szczepanowski, R., Vinardell, J. M., Zehner, S., and Göttfert, M. “Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103”. Journal of Bacteriology 194.6 (2012): 1617-1618.

21 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Sinorhizobium fredii HH103 RirA Is Required for Oxidative Stress Resistance and Efficient Symbiosis with Soybean.
Crespo-Rivas JC, Navarro-Gómez P, Alias-Villegas C, Shi J, Zhen T, Niu Y, Cuéllar V, Moreno J, Cubo T, Vinardell JM, Ruiz-Sainz JE, Acosta-Jurado S, Soto MJ., Int J Mol Sci 20(3), 2019
PMID: 30759803
Heterologous Expression of Rhizobial CelC2 Cellulase Impairs Symbiotic Signaling and Nodulation in Medicago truncatula.
Robledo M, Menéndez E, Jiménez-Zurdo JI, Rivas R, Velázquez E, Martínez-Molina E, Oldroyd G, Mateos PF., Mol Plant Microbe Interact 31(5), 2018
PMID: 29334470
Identification of Soybean Genes Whose Expression is Affected by the Ensifer fredii HH103 Effector Protein NopP.
Wang J, Wang J, Liu C, Ma C, Li C, Zhang Y, Qi Z, Zhu R, Shi Y, Zou J, Li Q, Zhu J, Wen Y, Sun Z, Liu H, Jiang H, Yin Z, Hu Z, Chen Q, Wu X, Xin D., Int J Mol Sci 19(11), 2018
PMID: 30400148
Molecular characterization of the pSinB plasmid of the arsenite oxidizing, metallotolerant Sinorhizobium sp. M14 - insight into the heavy metal resistome of sinorhizobial extrachromosomal replicons.
Romaniuk K, Dziewit L, Decewicz P, Mielnicki S, Radlinska M, Drewniak L., FEMS Microbiol Ecol 93(1), 2017
PMID: 27797963
Genetic Analysis Reveals the Essential Role of Nitrogen Phosphotransferase System Components in Sinorhizobium fredii CCBAU 45436 Symbioses with Soybean and Pigeonpea Plants.
Li YZ, Wang D, Feng XY, Jiao J, Chen WX, Tian CF., Appl Environ Microbiol 82(4), 2016
PMID: 26682851
Genome sequence of Shinella sp. strain DD12, isolated from homogenized guts of starved Daphnia magna.
Poehlein A, Freese H, Daniel R, Simeonova DD., Stand Genomic Sci 11(), 2016
PMID: 26865909
Genomic resources for identification of the minimal N2 -fixing symbiotic genome.
diCenzo GC, Zamani M, Milunovic B, Finan TM., Environ Microbiol 18(8), 2016
PMID: 26768651
Exopolysaccharide Production by Sinorhizobium fredii HH103 Is Repressed by Genistein in a NodD1-Dependent Manner.
Acosta-Jurado S, Navarro-Gómez P, Murdoch Pdel S, Crespo-Rivas JC, Jie S, Cuesta-Berrio L, Ruiz-Sainz JE, Rodríguez-Carvajal MÁ, Vinardell JM., PLoS One 11(8), 2016
PMID: 27486751
A transcriptomic analysis of the effect of genistein on Sinorhizobium fredii HH103 reveals novel rhizobial genes putatively involved in symbiosis.
Pérez-Montaño F, Jiménez-Guerrero I, Acosta-Jurado S, Navarro-Gómez P, Ollero FJ, Ruiz-Sainz JE, López-Baena FJ, Vinardell JM., Sci Rep 6(), 2016
PMID: 27539649
The Sinorhizobium fredii HH103 Genome: A Comparative Analysis With S. fredii Strains Differing in Their Symbiotic Behavior With Soybean.
Vinardell JM, Acosta-Jurado S, Zehner S, Göttfert M, Becker A, Baena I, Blom J, Crespo-Rivas JC, Goesmann A, Jaenicke S, Krol E, McIntosh M, Margaret I, Pérez-Montaño F, Schneiker-Bekel S, Serranía J, Szczepanowski R, Buendía AM, Lloret J, Bonilla I, Pühler A, Ruiz-Sainz JE, Weidner S., Mol Plant Microbe Interact 28(7), 2015
PMID: 25675256
Symbiotic matching, taxonomic position, and field assessment of symbiotically efficient rhizobia isolated from soybean root nodules in Sichuan, China
Chen YX, Zhou T, Penttinen P, Zou L, Wang K, Cui YQ, Heng NN, Xu KW., Biol Fertil Soils 51(6), 2015
PMID: IND604387994
Distribution of new satellites and simple sequence repeats in annual and perennial Glycine species.
Chen H, Chung MC, Tsai YC, Wei FJ, Hsieh JS, Hsing YC., Bot Stud 56(1), 2015
PMID: 28510831
Commonalities and differences of T3SSs in rhizobia and plant pathogenic bacteria.
Tampakaki AP., Front Plant Sci 5(), 2014
PMID: 24723933
Divergent nod-containing Bradyrhizobium sp. DOA9 with a megaplasmid and its host range.
Teamtisong K, Songwattana P, Noisangiam R, Piromyou P, Boonkerd N, Tittabutr P, Minamisawa K, Nantagij A, Okazaki S, Abe M, Uchiumi T, Teaumroong N., Microbes Environ 29(4), 2014
PMID: 25283477
Structure and biological roles of Sinorhizobium fredii HH103 exopolysaccharide.
Rodríguez-Navarro DN, Rodríguez-Carvajal MA, Acosta-Jurado S, Soto MJ, Margaret I, Crespo-Rivas JC, Sanjuan J, Temprano F, Gil-Serrano A, Ruiz-Sainz JE, Vinardell JM., PLoS One 9(12), 2014
PMID: 25521500
The tRNAarg gene and engA are essential genes on the 1.7-Mb pSymB megaplasmid of Sinorhizobium meliloti and were translocated together from the chromosome in an ancestral strain.
diCenzo G, Milunovic B, Cheng J, Finan TM., J Bacteriol 195(2), 2013
PMID: 23123907
Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies.
Sugawara M, Epstein B, Badgley BD, Unno T, Xu L, Reese J, Gyaneshwar P, Denny R, Mudge J, Bharti AK, Farmer AD, May GD, Woodward JE, Médigue C, Vallenet D, Lajus A, Rouy Z, Martinez-Vaz B, Tiffin P, Young ND, Sadowsky MJ., Genome Biol 14(2), 2013
PMID: 23425606
The Sinorhizobium fredii HH103 lipopolysaccharide is not only relevant at early soybean nodulation stages but also for symbiosome stability in mature nodules.
Margaret I, Lucas MM, Acosta-Jurado S, Buendía-Clavería AM, Fedorova E, Hidalgo Á, Rodríguez-Carvajal MA, Rodriguez-Navarro DN, Ruiz-Sainz JE, Vinardell JM., PLoS One 8(10), 2013
PMID: 24098345
A set of Lotus japonicus Gifu x Lotus burttii recombinant inbred lines facilitates map-based cloning and QTL mapping.
Sandal N, Jin H, Rodriguez-Navarro DN, Temprano F, Cvitanich C, Brachmann A, Sato S, Kawaguchi M, Tabata S, Parniske M, Ruiz-Sainz JE, Andersen SU, Stougaard J., DNA Res 19(4), 2012
PMID: 22619310
Complete genome sequence of the broad-host-range strain Sinorhizobium fredii USDA257.
Schuldes J, Rodriguez Orbegoso M, Schmeisser C, Krishnan HB, Daniel R, Streit WR., J Bacteriol 194(16), 2012
PMID: 22843606
Draft genome sequence of the bean-nodulating Sinorhizobium fredii strain GR64.
Torres Tejerizo G, Lozano L, González V, Bustos P, Romero D, Brom S., J Bacteriol 194(24), 2012
PMID: 23209231

11 References

Daten bereitgestellt von Europe PubMed Central.

A purL mutant of Sinorhizobium fredii HH103 is symbiotically defective and altered in its lipopolysaccharide.
Buendia-Claveria AM, Moussaid A, Ollero FJ, Vinardell JM, Torres A, Moreno J, Gil-Serrano AM, Rodriguez-Carvajal MA, Tejero-Mateo P, Peart JL, Brewin NJ, Ruiz-Sainz JE., Microbiology (Reading, Engl.) 149(Pt 7), 2003
PMID: 12855732
Evaluation of the symbiotic properties of in European soils
Buendía-Clavería AM, Rodríguez-Navarro DN, Santamaría C, Ruiz-Sainz JE, Temprano F., 1994
Predominance of Fast-Growing Rhizobium japonicum in a Soybean Field in the People's Republic of China.
Dowdle SF, Bohlool BB., Appl. Environ. Microbiol. 50(5), 1985
PMID: 16346926
Consed: a graphical tool for sequence finishing.
Gordon D, Abajian C, Green P., Genome Res. 8(3), 1998
PMID: 9521923
Genetic diversity of indigenous tropical fast-growing rhizobia isolated from soybean nodules
Hungria M., 2006
Versatile and open software for comparing large genomes.
Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M, Antonescu C, Salzberg SL., Genome Biol. 5(2), 2004
PMID: 14759262
Symbiotic properties and first analyses of the genomic sequence of the fast growing model strain Sinorhizobium fredii HH103 nodulating soybean.
Margaret I, Becker A, Blom J, Bonilla I, Goesmann A, Gottfert M, Lloret J, Mittard-Runte V, Ruckert C, Ruiz-Sainz JE, Vinardell JM, Weidner S., J. Biotechnol. 155(1), 2011
PMID: 21458507
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Genetic diversity of fast-growing rhizobia that nodulate soybean (Glycine max L
Saldaña G., 2003
Phylogenetic and genetic relationships of Mesorhizobium tianshanense and related rhizobia.
Tan ZY, Xu XD, Wang ET, Gao JL, Martinez-Romero E, Chen WX., Int. J. Syst. Bacteriol. 47(3), 1997
PMID: 9226921
Genetic diversity of nodulating and non-nodulating rhizobia associated with wild soybean (Glycine soja Sieb. & Zucc.) in different ecoregions of China.
Wu LJ, Wang HQ, Wang ET, Chen WX, Tian CF., FEMS Microbiol. Ecol. 76(3), 2011
PMID: 21303397
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