The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins
Perlick AM, Fruhling M, Schroder G, Frosch SC, Pühler A (1996)
PLANT PHYSIOLOGY 110(1): 147-154.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Perlick, AM;
Fruhling, M;
Schroder, G;
Frosch, SC;
Pühler, AlfredUniBi
Einrichtung
Abstract / Bemerkung
Nodulin gene transcripts isolated from a broad bean (Vicia faba L.) root nodule cDNA library and designated VfNOD32 are detectable in the nitrogen-fixing zone III of nodules and in much smaller amounts in flowers. In nodules, these transcripts are detectable for the first time 7 d after inoculation, at least 1 d before leghemoglobin gene transcription starts. Two putative full-length cDNAs representing different transcript sequences of 92.5% identity were sequenced. The corresponding broad bean genes were termed VfNOD32-A1 and VfNOD32-A2, and the encoded proteins were termed Nvf32-A1 and Nvf32-A2. The derived amino acid sequences of the Nvf32 proteins are highly homologous to the Vicia narbonensis (alpha/beta)(8)-barrel seed protein narbonin. Considering this homology, Nvf32 is assumed to have a similar structure consisting of beta-sheets forming a central barrel surrounded by alpha-helices. The two Nvf32 sequences also contain two conserved amino acid motifs that are characteristic of class-III chitinases. Several amino acids demonstrated to be essential for chitinase activity are conserved in both regions, whereas one essential glutamic acid was changed to glycine in the Nvf32-A1 isoform but not in the Nvf32-A2 isoform.
Erscheinungsjahr
1996
Zeitschriftentitel
PLANT PHYSIOLOGY
Band
110
Ausgabe
1
Seite(n)
147-154
ISSN
0032-0889
eISSN
1532-2548
Page URI
https://pub.uni-bielefeld.de/record/1629067
Zitieren
Perlick AM, Fruhling M, Schroder G, Frosch SC, Pühler A. The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins. PLANT PHYSIOLOGY. 1996;110(1):147-154.
Perlick, A. M., Fruhling, M., Schroder, G., Frosch, S. C., & Pühler, A. (1996). The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins. PLANT PHYSIOLOGY, 110(1), 147-154. https://doi.org/10.1104/pp.110.1.147
Perlick, AM, Fruhling, M, Schroder, G, Frosch, SC, and Pühler, Alfred. 1996. “The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins”. PLANT PHYSIOLOGY 110 (1): 147-154.
Perlick, A. M., Fruhling, M., Schroder, G., Frosch, S. C., and Pühler, A. (1996). The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins. PLANT PHYSIOLOGY 110, 147-154.
Perlick, A.M., et al., 1996. The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins. PLANT PHYSIOLOGY, 110(1), p 147-154.
A.M. Perlick, et al., “The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins”, PLANT PHYSIOLOGY, vol. 110, 1996, pp. 147-154.
Perlick, A.M., Fruhling, M., Schroder, G., Frosch, S.C., Pühler, A.: The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins. PLANT PHYSIOLOGY. 110, 147-154 (1996).
Perlick, AM, Fruhling, M, Schroder, G, Frosch, SC, and Pühler, Alfred. “The broad bean gene VfNOD32 encodes a nodulin with sequence similarities to chitinases that is homologous to (alpha/beta)(8)-barrel-type seed proteins”. PLANT PHYSIOLOGY 110.1 (1996): 147-154.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
EMBL
2 Einträge gefunden, die diesen Artikel zitieren
V.faba mRNA for nodulin homologous to narbonin (EMBL: Z46911)
Sequence length: 1110
Download in FASTA format
Sequence length: 1110
Download in FASTA format
V.faba mRNA for nodulin homologous to narbonin (EMBL: Z46910)
Sequence length: 1084
Download in FASTA format
Sequence length: 1084
Download in FASTA format
UNIPROT
2 Einträge gefunden, die diesen Artikel zitieren
13 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
A detailed view on sulphur metabolism at the cellular and whole-plant level illustrates challenges in metabolite flux analyses.
Rennenberg H, Herschbach C., J Exp Bot 65(20), 2014
PMID: 25124317
Rennenberg H, Herschbach C., J Exp Bot 65(20), 2014
PMID: 25124317
Genotype influences sulfur metabolism in broccoli (Brassica oleracea L.) under elevated CO2 and NaCl stress.
Rodríguez-Hernández Mdel C, Moreno DA, Carvajal M, Martínez-Ballesta Mdel C., Plant Cell Physiol 55(12), 2014
PMID: 25246493
Rodríguez-Hernández Mdel C, Moreno DA, Carvajal M, Martínez-Ballesta Mdel C., Plant Cell Physiol 55(12), 2014
PMID: 25246493
Response of barley plants to Fe deficiency and Cd contamination as affected by S starvation.
Astolfi S, Zuchi S, Neumann G, Cesco S, Sanità di Toppi L, Pinton R., J Exp Bot 63(3), 2012
PMID: 22090437
Astolfi S, Zuchi S, Neumann G, Cesco S, Sanità di Toppi L, Pinton R., J Exp Bot 63(3), 2012
PMID: 22090437
Arabidopsis OPT6 is an oligopeptide transporter with exceptionally broad substrate specificity.
Pike S, Patel A, Stacey G, Gassmann W., Plant Cell Physiol 50(11), 2009
PMID: 19808809
Pike S, Patel A, Stacey G, Gassmann W., Plant Cell Physiol 50(11), 2009
PMID: 19808809
Mutations in DMI3 and SUNN modify the appressorium-responsive root proteome in arbuscular mycorrhiza.
Amiour N, Recorbet G, Robert F, Gianinazzi S, Dumas-Gaudot E., Mol Plant Microbe Interact 19(9), 2006
PMID: 16941903
Amiour N, Recorbet G, Robert F, Gianinazzi S, Dumas-Gaudot E., Mol Plant Microbe Interact 19(9), 2006
PMID: 16941903
Sinorhizobium meliloti-induced chitinase gene expression in Medicago truncatula ecotype R108-1: a comparison between symbiosis-specific class V and defence-related class IV chitinases.
Salzer P, Feddermann N, Wiemken A, Boller T, Staehelin C., Planta 219(4), 2004
PMID: 15107993
Salzer P, Feddermann N, Wiemken A, Boller T, Staehelin C., Planta 219(4), 2004
PMID: 15107993
Molecular analysis and control of cysteine biosynthesis: integration of nitrogen and sulphur metabolism.
Hesse H, Nikiforova V, Gakière B, Hoefgen R., J Exp Bot 55(401), 2004
PMID: 15133050
Hesse H, Nikiforova V, Gakière B, Hoefgen R., J Exp Bot 55(401), 2004
PMID: 15133050
Differential expression of eight chitinase genes in Medicago truncatula roots during mycorrhiza formation, nodulation, and pathogen infection.
Salzer P, Bonanomi A, Beyer K, Vögeli-Lange R, Aeschbacher RA, Lange J, Wiemken A, Kim D, Cook DR, Boller T., Mol Plant Microbe Interact 13(7), 2000
PMID: 10875337
Salzer P, Bonanomi A, Beyer K, Vögeli-Lange R, Aeschbacher RA, Lange J, Wiemken A, Kim D, Cook DR, Boller T., Mol Plant Microbe Interact 13(7), 2000
PMID: 10875337
The promoter of the Vicia faba L. gene VfEnod12 encoding an early nodulin is active in cortical cells and nodule primordia of transgenic hairy roots of Vicia hirsuta as well as in the prefixing zone II of mature transgenic V. hirsuta root nodules.
Frühling M, Schröder G, Hohnjec N, Pühler A, Perlick AM, Küster H., Plant Sci 160(1), 2000
PMID: 11164578
Frühling M, Schröder G, Hohnjec N, Pühler A, Perlick AM, Küster H., Plant Sci 160(1), 2000
PMID: 11164578
The abundant 31-kilodalton banana pulp protein is homologous to class-III acidic chitinases.
Clendennen SK, López-Gómez R, Gómez-Lim M, Arntzen CJ, May GD., Phytochemistry 47(4), 1998
PMID: 9461677
Clendennen SK, López-Gómez R, Gómez-Lim M, Arntzen CJ, May GD., Phytochemistry 47(4), 1998
PMID: 9461677
The Vicia faba leghemoglobin gene VfLb29 is induced in root nodules and in roots colonized by the arbuscular mycorrhizal fungus Glomus fasciculatum.
Frühling M, Roussel H, Gianinazzi-Pearson V, Pühler A, Perlick AM., Mol Plant Microbe Interact 10(1), 1997
PMID: 9002275
Frühling M, Roussel H, Gianinazzi-Pearson V, Pühler A, Perlick AM., Mol Plant Microbe Interact 10(1), 1997
PMID: 9002275
alpha-Amylase family: molecular biology and evolution.
Janecek S., Prog Biophys Mol Biol 67(1), 1997
PMID: 9401418
Janecek S., Prog Biophys Mol Biol 67(1), 1997
PMID: 9401418
The modular nodulins Nvf-28/32 of broad bean (Vicia faba L.): alternative exon combinations account for different modular structures.
Küster H, Frühling M, Pühler A, Perlick AM., Mol Gen Genet 252(6), 1996
PMID: 8917307
Küster H, Frühling M, Pühler A, Perlick AM., Mol Gen Genet 252(6), 1996
PMID: 8917307
34 References
Daten bereitgestellt von Europe PubMed Central.
Isolation and characterization of genes encoding two chitinase enzymes from Serratia marcescens.
Jones JD, Grady KL, Suslow TV, Bedbrook JR., EMBO J. 5(3), 1986
PMID: 16453672
Jones JD, Grady KL, Suslow TV, Bedbrook JR., EMBO J. 5(3), 1986
PMID: 16453672
Site-directed mutagenesis of chitinase from Alteromonas sp. strain O-7.
Tsujibo H, Orikoshi H, Imada C, Okami Y, Miyamoto K, Inamori Y., Biosci. Biotechnol. Biochem. 57(8), 1993
PMID: 7764022
Tsujibo H, Orikoshi H, Imada C, Okami Y, Miyamoto K, Inamori Y., Biosci. Biotechnol. Biochem. 57(8), 1993
PMID: 7764022
Correlation between ultrastructural differentiation of bacteroids and nitrogen fixation in alfalfa nodules.
Vasse J, de Billy F, Camut S, Truchet G., J. Bacteriol. 172(8), 1990
PMID: 2376562
Vasse J, de Billy F, Camut S, Truchet G., J. Bacteriol. 172(8), 1990
PMID: 2376562
Site-directed mutagenesis of the catalytic residues Asp-52 and Glu-35 of chicken egg white lysozyme.
Malcolm BA, Rosenberg S, Corey MJ, Allen JS, de Baetselier A, Kirsch JF., Proc. Natl. Acad. Sci. U.S.A. 86(1), 1989
PMID: 2563161
Malcolm BA, Rosenberg S, Corey MJ, Allen JS, de Baetselier A, Kirsch JF., Proc. Natl. Acad. Sci. U.S.A. 86(1), 1989
PMID: 2563161
Chitinases of Streptomyces olivaceoviridis and significance of processing for multiplicity.
Romaguera A, Menge U, Breves R, Diekmann H., J. Bacteriol. 174(11), 1992
PMID: 1592803
Romaguera A, Menge U, Breves R, Diekmann H., J. Bacteriol. 174(11), 1992
PMID: 1592803
Structure of the gene encoding chitinase D of Bacillus circulans WL-12 and possible homology of the enzyme to other prokaryotic chitinases and class III plant chitinases.
Watanabe T, Oyanagi W, Suzuki K, Ohnishi K, Tanaka H., J. Bacteriol. 174(2), 1992
PMID: 1729234
Watanabe T, Oyanagi W, Suzuki K, Ohnishi K, Tanaka H., J. Bacteriol. 174(2), 1992
PMID: 1729234
Prediction of protein secondary structure at better than 70% accuracy.
Rost B, Sander C., J. Mol. Biol. 232(2), 1993
PMID: 8345525
Rost B, Sander C., J. Mol. Biol. 232(2), 1993
PMID: 8345525
Genes involved in lipopolysaccharide production and symbiosis are clustered on the chromosome of Rhizobium leguminosarum biovar viciae VF39.
Priefer UB., J. Bacteriol. 171(11), 1989
PMID: 2553672
Priefer UB., J. Bacteriol. 171(11), 1989
PMID: 2553672
Nucleotide sequence of the chitinase B gene of Serratia marcescens QMB1466.
Harpster MH, Dunsmuir P., Nucleic Acids Res. 17(13), 1989
PMID: 2668886
Harpster MH, Dunsmuir P., Nucleic Acids Res. 17(13), 1989
PMID: 2668886
A new method for predicting signal sequence cleavage sites.
von Heijne G., Nucleic Acids Res. 14(11), 1986
PMID: 3714490
von Heijne G., Nucleic Acids Res. 14(11), 1986
PMID: 3714490
The current status and portability of our sequence handling software.
Staden R., Nucleic Acids Res. 14(1), 1986
PMID: 3511446
Staden R., Nucleic Acids Res. 14(1), 1986
PMID: 3511446
The primary structure of hevamine, an enzyme with lysozyme/chitinase activity from Hevea brasiliensis latex.
Jekel PA, Hartmann BH, Beintema JJ., Eur. J. Biochem. 200(1), 1991
PMID: 1879417
Jekel PA, Hartmann BH, Beintema JJ., Eur. J. Biochem. 200(1), 1991
PMID: 1879417
Identification of glutamic acid 204 and aspartic acid 200 in chitinase A1 of Bacillus circulans WL-12 as essential residues for chitinase activity.
Watanabe T, Kobori K, Miyashita K, Fujii T, Sakai H, Uchida M, Tanaka H., J. Biol. Chem. 268(25), 1993
PMID: 8103047
Watanabe T, Kobori K, Miyashita K, Fujii T, Sakai H, Uchida M, Tanaka H., J. Biol. Chem. 268(25), 1993
PMID: 8103047
A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.
Feinberg AP, Vogelstein B., Anal. Biochem. 132(1), 1983
PMID: 6312838
Feinberg AP, Vogelstein B., Anal. Biochem. 132(1), 1983
PMID: 6312838
A simplified protocol for fast plasmid DNA sequencing.
Zimmermann J, Voss H, Schwager C, Stegemann J, Erfle H, Stucky K, Kristensen T, Ansorge W., Nucleic Acids Res. 18(4), 1990
PMID: 2315028
Zimmermann J, Voss H, Schwager C, Stegemann J, Erfle H, Stucky K, Kristensen T, Ansorge W., Nucleic Acids Res. 18(4), 1990
PMID: 2315028
Isolation and Characterization of the Genes Encoding Basic and Acidic Chitinase in Arabidopsis thaliana.
Samac DA, Hironaka CM, Yallaly PE, Shah DM., Plant Physiol. 93(3), 1990
PMID: 16667600
Samac DA, Hironaka CM, Yallaly PE, Shah DM., Plant Physiol. 93(3), 1990
PMID: 16667600
The ENOD12 gene product is involved in the infection process during the pea-Rhizobium interaction.
Scheres B, Van De Wiel C, Zalensky A, Horvath B, Spaink H, Van Eck H, Zwartkruis F, Wolters AM, Gloudemans T, Van Kammen A., Cell 60(2), 1990
PMID: 2297789
Scheres B, Van De Wiel C, Zalensky A, Horvath B, Spaink H, Van Eck H, Zwartkruis F, Wolters AM, Gloudemans T, Van Kammen A., Cell 60(2), 1990
PMID: 2297789
Database of homology-derived protein structures and the structural meaning of sequence alignment.
Sander C, Schneider R., Proteins 9(1), 1991
PMID: 2017436
Sander C, Schneider R., Proteins 9(1), 1991
PMID: 2017436
Primary structure of a chitinase-encoding gene (chi1) from the filamentous fungus Aphanocladium album: similarity to bacterial chitinases.
Blaiseau PL, Lafay JF., Gene 120(2), 1992
PMID: 1398137
Blaiseau PL, Lafay JF., Gene 120(2), 1992
PMID: 1398137
Chitinase is required for cell separation during growth of Saccharomyces cerevisiae.
Kuranda MJ, Robbins PW., J. Biol. Chem. 266(29), 1991
PMID: 1918080
Kuranda MJ, Robbins PW., J. Biol. Chem. 266(29), 1991
PMID: 1918080
The evolution of alpha/beta barrel enzymes.
Farber GK, Petsko GA., Trends Biochem. Sci. 15(6), 1990
PMID: 2200166
Farber GK, Petsko GA., Trends Biochem. Sci. 15(6), 1990
PMID: 2200166
Narbonin, a novel 2S protein from Vicia narbonensis L. seeds: cDNA, gene structure and developmentally regulated formation.
Nong VH, Schlesier B, Bassuner R, Repik A, Horstmann C, Muntz K., Plant Mol. Biol. 28(1), 1995
PMID: 7787188
Nong VH, Schlesier B, Bassuner R, Repik A, Horstmann C, Muntz K., Plant Mol. Biol. 28(1), 1995
PMID: 7787188
An inspection of the domain between putative TATA box and translation start site in 79 plant genes.
Joshi CP., Nucleic Acids Res. 15(16), 1987
PMID: 3628002
Joshi CP., Nucleic Acids Res. 15(16), 1987
PMID: 3628002
Nodulin Gene Expression and ENOD2 Localization in Effective, Nitrogen-Fixing and Ineffective, Bacteria-Free Nodules of Alfalfa.
Van De Wiel C, Norris JH, Bochenek B, Dickstein R, Bisseling T, Hirsch AM., Plant Cell 2(10), 1990
PMID: 12354949
Van De Wiel C, Norris JH, Bochenek B, Dickstein R, Bisseling T, Hirsch AM., Plant Cell 2(10), 1990
PMID: 12354949
A survey of transcripts expressed specifically in root nodules of broadbean (Vicia faba L.).
Perlick AM, Puhler A., Plant Mol. Biol. 22(6), 1993
PMID: 8400140
Perlick AM, Puhler A., Plant Mol. Biol. 22(6), 1993
PMID: 8400140
A new class of tobacco chitinases homologous to bacterial exo-chitinases displays antifungal activity.
Melchers LS, Apotheker-de Groot M, van der Knaap JA, Ponstein AS, Sela-Buurlage MB, Bol JF, Cornelissen BJ, van den Elzen PJ, Linthorst HJ., Plant J. 5(4), 1994
PMID: 8012401
Melchers LS, Apotheker-de Groot M, van der Knaap JA, Ponstein AS, Sela-Buurlage MB, Bol JF, Cornelissen BJ, van den Elzen PJ, Linthorst HJ., Plant J. 5(4), 1994
PMID: 8012401
Structural principles of alpha/beta barrel proteins: the packing of the interior of the sheet.
Lesk AM, Branden CI, Chothia C., Proteins 5(2), 1989
PMID: 2664768
Lesk AM, Branden CI, Chothia C., Proteins 5(2), 1989
PMID: 2664768
Cloning and high-level expression of chitinase-encoding gene of Streptomyces plicatus.
Robbins PW, Overbye K, Albright C, Benfield B, Pero J., Gene 111(1), 1992
PMID: 1532161
Robbins PW, Overbye K, Albright C, Benfield B, Pero J., Gene 111(1), 1992
PMID: 1532161
Rhizobium Lipooligosaccharides Rescue a Carrot Somatic Embryo Mutant.
De Jong AJ, Heidstra R, Spaink HP, Hartog MV, Meijer EA, Hendriks T, Schiavo FL, Terzi M, Bisseling T, Van Kammen A, De Vries SC., Plant Cell 5(6), 1993
PMID: 12271077
De Jong AJ, Heidstra R, Spaink HP, Hartog MV, Meijer EA, Hendriks T, Schiavo FL, Terzi M, Bisseling T, Van Kammen A, De Vries SC., Plant Cell 5(6), 1993
PMID: 12271077
A TIM barrel protein without enzymatic activity? Crystal-structure of narbonin at 1.8 A resolution.
Hennig M, Schlesier B, Dauter Z, Pfeffer S, Betzel C, Hohne WE, Wilson KS., FEBS Lett. 306(1), 1992
PMID: 1628747
Hennig M, Schlesier B, Dauter Z, Pfeffer S, Betzel C, Hohne WE, Wilson KS., FEBS Lett. 306(1), 1992
PMID: 1628747
A carrot somatic embryo mutant is rescued by chitinase.
De Jong AJ, Cordewener J, Lo Schiavo F, Terzi M, Vandekerckhove J, Van Kammen A, De Vries SC., Plant Cell 4(4), 1992
PMID: 1498601
De Jong AJ, Cordewener J, Lo Schiavo F, Terzi M, Vandekerckhove J, Van Kammen A, De Vries SC., Plant Cell 4(4), 1992
PMID: 1498601
Characterization of GmENOD40, a gene showing novel patterns of cell-specific expression during soybean nodule development.
Yang WC, Katinakis P, Hendriks P, Smolders A, de Vries F, Spee J, van Kammen A, Bisseling T, Franssen H., Plant J. 3(4), 1993
PMID: 8220464
Yang WC, Katinakis P, Hendriks P, Smolders A, de Vries F, Spee J, van Kammen A, Bisseling T, Franssen H., Plant J. 3(4), 1993
PMID: 8220464
Acidic and basic class III chitinase mRNA accumulation in response to TMV infection of tobacco.
Lawton K, Ward E, Payne G, Moyer M, Ryals J., Plant Mol. Biol. 19(5), 1992
PMID: 1643280
Lawton K, Ward E, Payne G, Moyer M, Ryals J., Plant Mol. Biol. 19(5), 1992
PMID: 1643280
Structure of chicken muscle triose phosphate isomerase determined crystallographically at 2.5 angstrom resolution using amino acid sequence data.
Banner DW, Bloomer AC, Petsko GA, Phillips DC, Pogson CI, Wilson IA, Corran PH, Furth AJ, Milman JD, Offord RE, Priddle JD, Waley SG., Nature 255(5510), 1975
PMID: 1134550
Banner DW, Bloomer AC, Petsko GA, Phillips DC, Pogson CI, Wilson IA, Corran PH, Furth AJ, Milman JD, Offord RE, Priddle JD, Waley SG., Nature 255(5510), 1975
PMID: 1134550
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 8587978
PubMed | Europe PMC
Suchen in