The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity
Gartemann K-H, Abt B, Bekel T, Burger A, Engemann J, Fluegel M, Gaigalat L, Goesmann A, Graefen I, Kalinowski J, Kaup O, et al. (2008)
JOURNAL OF BACTERIOLOGY 190(6): 2138-2149.
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Autor*in
Gartemann, Karl-HeinzUniBi ;
Abt, Birte;
Bekel, Thomas;
Burger, Annette;
Engemann, Jutta;
Fluegel, Monika;
Gaigalat, Lars;
Goesmann, Alexander;
Graefen, Ines;
Kalinowski, JörnUniBi;
Kaup, OlafUniBi ;
Kirchner, Oliver
Alle
Alle
Einrichtung
Centrum für Biotechnologie > Institut für Genomforschung und Systembiologie
Centrum für Biotechnologie > Technologieplattformen > Bioinformatics Resource Facility
Fakultät für Biologie > Gentechnologie/Mikrobiologie
Centrum für Biotechnologie > Arbeitsgruppe J. Kalinowski
Centrum für Biotechnologie > Arbeitsgruppe A. Pühler
Centrum für Biotechnologie > Technologieplattformen > Bioinformatics Resource Facility
Fakultät für Biologie > Gentechnologie/Mikrobiologie
Centrum für Biotechnologie > Arbeitsgruppe J. Kalinowski
Centrum für Biotechnologie > Arbeitsgruppe A. Pühler
Abstract / Bemerkung
Clavibacter michiganensis subsp. michiganensis is a plant-pathogenic aetinomycete that causes bacterial wilt and canker of tomato. The nucleotide sequence of the genome of strain NCPPB382 was determined. The chromosome is circular, consists of 3.298 Mb, and has a high G+C content (72.6%). Annotation revealed 3,080 putative protein-encoding sequences; only 26 pseudogenes were detected. Two rrn operons, 45 tRNAs, and three small stable RNA genes were found. The two circular plasmids, pCM1 (27.4 kbp) and pCM2 (70.0 kbp), which carry pathogenicity genes and thus are essential for virulence, have lower G+C contents (66.5 and 67.6%, respectively). In contrast to the genome of the closely related organism Clavibacter michiganensis subsp. sepedonicus, the genome of C. michiganensis subsp. michiganensis lacks complete insertion elements and transposons. The 129-kb chp/tomA region with a low G+C content near the chromosomal origin of replication was shown to be necessary for pathogenicity. This region contains numerous genes encoding proteins involved in uptake and metabolism of sugars and several serine proteases. There is evidence that single genes located in this region, especially genes encoding serine proteases, are required for efficient colonization of the host. Although C. michiganensis subsp. michiganensis grows mainly in the xylem of tomato plants, no evidence for pronounced genome reduction was found. C. michiganensis subsp. michiganensis seems to have as many transporters and regulators as typical soil-inhabiting bacteria. However, the apparent lack of a sulfate reduction pathway, which makes C. michiganensis subsp. michiganensis dependent on reduced sulfur compounds for growth, is probably the reason for the poor survival of C. michiganensis subsp. michiganensis in soil.
Erscheinungsjahr
2008
Zeitschriftentitel
JOURNAL OF BACTERIOLOGY
Band
190
Ausgabe
6
Seite(n)
2138-2149
ISSN
0021-9193
Page URI
https://pub.uni-bielefeld.de/record/1592345
Zitieren
Gartemann K-H, Abt B, Bekel T, et al. The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity. JOURNAL OF BACTERIOLOGY. 2008;190(6):2138-2149.
Gartemann, K. - H., Abt, B., Bekel, T., Burger, A., Engemann, J., Fluegel, M., Gaigalat, L., et al. (2008). The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity. JOURNAL OF BACTERIOLOGY, 190(6), 2138-2149. https://doi.org/10.1128/JB.01595-07
Gartemann, Karl-Heinz, Abt, Birte, Bekel, Thomas, Burger, Annette, Engemann, Jutta, Fluegel, Monika, Gaigalat, Lars, et al. 2008. “The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity”. JOURNAL OF BACTERIOLOGY 190 (6): 2138-2149.
Gartemann, K. - H., Abt, B., Bekel, T., Burger, A., Engemann, J., Fluegel, M., Gaigalat, L., Goesmann, A., Graefen, I., Kalinowski, J., et al. (2008). The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity. JOURNAL OF BACTERIOLOGY 190, 2138-2149.
Gartemann, K.-H., et al., 2008. The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity. JOURNAL OF BACTERIOLOGY, 190(6), p 2138-2149.
K.-H. Gartemann, et al., “The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity”, JOURNAL OF BACTERIOLOGY, vol. 190, 2008, pp. 2138-2149.
Gartemann, K.-H., Abt, B., Bekel, T., Burger, A., Engemann, J., Fluegel, M., Gaigalat, L., Goesmann, A., Graefen, I., Kalinowski, J., Kaup, O., Kirchner, O., Krause, L., Linke, B., McHardy, A., Meyer, F., Pohle, S., Rückert, C., Schneiker-Bekel, S., Zellermann, E.-M., Pühler, A., Eichenlaub, R., Kaiser, O., Bartels, D.: The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity. JOURNAL OF BACTERIOLOGY. 190, 2138-2149 (2008).
Gartemann, Karl-Heinz, Abt, Birte, Bekel, Thomas, Burger, Annette, Engemann, Jutta, Fluegel, Monika, Gaigalat, Lars, Goesmann, Alexander, Graefen, Ines, Kalinowski, Jörn, Kaup, Olaf, Kirchner, Oliver, Krause, Lutz, Linke, Burkhard, McHardy, Alice, Meyer, Folker, Pohle, Sandra, Rückert, Christian, Schneiker-Bekel, Susanne, Zellermann, Eva-Maria, Pühler, Alfred, Eichenlaub, Rudolf, Kaiser, Olaf, and Bartels, Daniela. “The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity”. JOURNAL OF BACTERIOLOGY 190.6 (2008): 2138-2149.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
UNIPROT
3078 Einträge gefunden, die diesen Artikel zitieren von denen 10 angezeigt werden
Putative two-component system sensor kinase (UNIPROT: A5CTI0)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
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Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative transcriptional regulator, LacI family (UNIPROT: A5CTK1)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative dehydrogenase/oxidoreductase (UNIPROT: A5CM47)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
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Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domai (UNIPROT: A5CP02)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative ABC transporter, ATP-binding protein (UNIPROT: A5CSF6)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative oxidoreductase (UNIPROT: A5CMQ7)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative serine peptidase, family S8 (UNIPROT: A5CTA5)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
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Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative peptide ABC transporter, ATP-binding protein (UNIPROT: A5CUN4)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Putative glycosyltransferase (UNIPROT: A5CRE8)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Transport ATP-binding protein CydC (UNIPROT: A5CR86)
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
Organism: Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382)
Download in FASTA format
65 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
A genomics perspective on natural product biosynthesis in plant pathogenic bacteria.
Baldeweg F, Hoffmeister D, Nett M., Nat Prod Rep 36(2), 2019
PMID: 30063232
Baldeweg F, Hoffmeister D, Nett M., Nat Prod Rep 36(2), 2019
PMID: 30063232
Multiple plasmid-borne virulence genes of Clavibacter michiganensis ssp. capsici critical for disease development in pepper.
Hwang IS, Oh EJ, Kim D, Oh CS., New Phytol 217(3), 2018
PMID: 29134663
Hwang IS, Oh EJ, Kim D, Oh CS., New Phytol 217(3), 2018
PMID: 29134663
Re-classification of Clavibacter michiganensis subspecies on the basis of whole-genome and multi-locus sequence analyses.
Li X, Tambong J, Yuan KX, Chen W, Xu H, Lévesque CA, De Boer SH., Int J Syst Evol Microbiol 68(1), 2018
PMID: 29160202
Li X, Tambong J, Yuan KX, Chen W, Xu H, Lévesque CA, De Boer SH., Int J Syst Evol Microbiol 68(1), 2018
PMID: 29160202
Plant-like bacterial expansins play contrasting roles in two tomato vascular pathogens.
Tancos MA, Lowe-Power TM, Peritore-Galve FC, Tran TM, Allen C, Smart CD., Mol Plant Pathol 19(5), 2018
PMID: 28868644
Tancos MA, Lowe-Power TM, Peritore-Galve FC, Tran TM, Allen C, Smart CD., Mol Plant Pathol 19(5), 2018
PMID: 28868644
Comparative Genomic Analyses of Clavibacter michiganensis subsp. insidiosus and Pathogenicity on Medicago truncatula.
Lu Y, Ishimaru CA, Glazebrook J, Samac DA., Phytopathology 108(2), 2018
PMID: 28952422
Lu Y, Ishimaru CA, Glazebrook J, Samac DA., Phytopathology 108(2), 2018
PMID: 28952422
Analysis of Extreme Phenotype Bulk Copy Number Variation (XP-CNV) Identified the Association of rp1 with Resistance to Goss's Wilt of Maize.
Hu Y, Ren J, Peng Z, Umana AA, Le H, Danilova T, Fu J, Wang H, Robertson A, Hulbert SH, White FF, Liu S., Front Plant Sci 9(), 2018
PMID: 29479358
Hu Y, Ren J, Peng Z, Umana AA, Le H, Danilova T, Fu J, Wang H, Robertson A, Hulbert SH, White FF, Liu S., Front Plant Sci 9(), 2018
PMID: 29479358
Clavibacter michiganensis ssp. michiganensis: bacterial canker of tomato, molecular interactions and disease management.
Nandi M, Macdonald J, Liu P, Weselowski B, Yuan ZC., Mol Plant Pathol (), 2018
PMID: 29528201
Nandi M, Macdonald J, Liu P, Weselowski B, Yuan ZC., Mol Plant Pathol (), 2018
PMID: 29528201
Phenotypic and Molecular-Phylogenetic Analysis Provide Novel Insights into the Diversity of Curtobacterium flaccumfaciens.
Osdaghi E, Taghavi SM, Calamai S, Biancalani C, Cerboneschi M, Tegli S, Harveson RM., Phytopathology 108(10), 2018
PMID: 29714091
Osdaghi E, Taghavi SM, Calamai S, Biancalani C, Cerboneschi M, Tegli S, Harveson RM., Phytopathology 108(10), 2018
PMID: 29714091
Differential contribution of Clavibacter michiganensis ssp. michiganensis virulence factors to systemic and local infection in tomato.
Chalupowicz L, Barash I, Reuven M, Dror O, Sharabani G, Gartemann KH, Eichenlaub R, Sessa G, Manulis-Sasson S., Mol Plant Pathol 18(3), 2017
PMID: 26992141
Chalupowicz L, Barash I, Reuven M, Dror O, Sharabani G, Gartemann KH, Eichenlaub R, Sessa G, Manulis-Sasson S., Mol Plant Pathol 18(3), 2017
PMID: 26992141
Conjugative type IVb pilus recognizes lipopolysaccharide of recipient cells to initiate PAPI-1 pathogenicity island transfer in Pseudomonas aeruginosa.
Hong TP, Carter MQ, Struffi P, Casonato S, Hao Y, Lam JS, Lory S, Jousson O., BMC Microbiol 17(1), 2017
PMID: 28173753
Hong TP, Carter MQ, Struffi P, Casonato S, Hao Y, Lam JS, Lory S, Jousson O., BMC Microbiol 17(1), 2017
PMID: 28173753
Comparative genomics of Clavibacter michiganensis subspecies, pathogens of important agricultural crops.
Tambong JT., PLoS One 12(3), 2017
PMID: 28319117
Tambong JT., PLoS One 12(3), 2017
PMID: 28319117
Whole genome sequence of two Rathayibacter toxicus strains reveals a tunicamycin biosynthetic cluster similar to Streptomyces chartreusis.
Sechler AJ, Tancos MA, Schneider DJ, King JG, Fennessey CM, Schroeder BK, Murray TD, Luster DG, Schneider WL, Rogers EE., PLoS One 12(8), 2017
PMID: 28796837
Sechler AJ, Tancos MA, Schneider DJ, King JG, Fennessey CM, Schroeder BK, Murray TD, Luster DG, Schneider WL, Rogers EE., PLoS One 12(8), 2017
PMID: 28796837
Genomic Analysis of Clavibacter michiganensis Reveals Insight Into Virulence Strategies and Genetic Diversity of a Gram-Positive Bacterial Pathogen.
Thapa SP, Pattathil S, Hahn MG, Jacques MA, Gilbertson RL, Coaker G., Mol Plant Microbe Interact 30(10), 2017
PMID: 28677494
Thapa SP, Pattathil S, Hahn MG, Jacques MA, Gilbertson RL, Coaker G., Mol Plant Microbe Interact 30(10), 2017
PMID: 28677494
Genome Content and Phylogenomics Reveal both Ancestral and Lateral Evolutionary Pathways in Plant-Pathogenic Streptomyces Species.
Huguet-Tapia JC, Lefebure T, Badger JH, Guan D, Pettis GS, Stanhope MJ, Loria R., Appl Environ Microbiol 82(7), 2016
PMID: 26826232
Huguet-Tapia JC, Lefebure T, Badger JH, Guan D, Pettis GS, Stanhope MJ, Loria R., Appl Environ Microbiol 82(7), 2016
PMID: 26826232
Genome Analysis and Development of a Multiplex TaqMan Real-Time PCR for Specific Identification and Detection of Clavibacter michiganensis subsp. nebraskensis.
Tambong JT, Xu R, Daayf F, Brière S, Bilodeau GJ, Tropiano R, Hartke A, Reid LM, Cott M, Cote T, Agarkova I., Phytopathology 106(12), 2016
PMID: 27452898
Tambong JT, Xu R, Daayf F, Brière S, Bilodeau GJ, Tropiano R, Hartke A, Reid LM, Cott M, Cote T, Agarkova I., Phytopathology 106(12), 2016
PMID: 27452898
The zoonotic potential of daptomycin non-susceptible enterococci.
Kelesidis T., Zoonoses Public Health 62(1), 2015
PMID: 24274811
Kelesidis T., Zoonoses Public Health 62(1), 2015
PMID: 24274811
Clavibacter michiganensis subsp. michiganensis Vatr1 and Vatr2 Transcriptional Regulators Are Required for Virulence in Tomato.
Savidor A, Chalupowicz L, Teper D, Gartemann KH, Eichenlaub R, Manulis-Sasson S, Barash I, Sessa G., Mol Plant Microbe Interact 2015(1), 2015
PMID: 27839071
Savidor A, Chalupowicz L, Teper D, Gartemann KH, Eichenlaub R, Manulis-Sasson S, Barash I, Sessa G., Mol Plant Microbe Interact 2015(1), 2015
PMID: 27839071
Characterizing the Genetic Diversity of the Clavibacter michiganensis subsp. michiganensis Population in New York.
Tancos MA, Lange HW, Smart CD., Phytopathology 105(2), 2015
PMID: 25208240
Tancos MA, Lange HW, Smart CD., Phytopathology 105(2), 2015
PMID: 25208240
Infection processes of xylem-colonizing pathogenic bacteria: possible explanations for the scarcity of qualitative disease resistance genes against them in crops.
Bae C, Han SW, Song YR, Kim BY, Lee HJ, Lee JM, Yeam I, Heu S, Oh CS., Theor Appl Genet 128(7), 2015
PMID: 25917599
Bae C, Han SW, Song YR, Kim BY, Lee HJ, Lee JM, Yeam I, Heu S, Oh CS., Theor Appl Genet 128(7), 2015
PMID: 25917599
Complete Genome Sequence of Clavibacter michiganensis subsp. insidiosus R1-1 Using PacBio Single-Molecule Real-Time Technology.
Lu Y, Samac DA, Glazebrook J, Ishimaru CA., Genome Announc 3(3), 2015
PMID: 25953184
Lu Y, Samac DA, Glazebrook J, Ishimaru CA., Genome Announc 3(3), 2015
PMID: 25953184
Putative Serine Protease Effectors of Clavibacter michiganensis Induce a Hypersensitive Response in the Apoplast of Nicotiana Species.
Lu Y, Hatsugai N, Katagiri F, Ishimaru CA, Glazebrook J., Mol Plant Microbe Interact 28(11), 2015
PMID: 26075829
Lu Y, Hatsugai N, Katagiri F, Ishimaru CA, Glazebrook J., Mol Plant Microbe Interact 28(11), 2015
PMID: 26075829
A Proteomic Study of Clavibacter Michiganensis Subsp. Michiganensis Culture Supernatants.
Hiery E, Poetsch A, Moosbauer T, Amin B, Hofmann J, Burkovski A., Proteomes 3(4), 2015
PMID: 28248277
Hiery E, Poetsch A, Moosbauer T, Amin B, Hofmann J, Burkovski A., Proteomes 3(4), 2015
PMID: 28248277
Evaluation of a SUMO E2 Conjugating Enzyme Involved in Resistance to Clavibacter michiganensis Subsp. michiganensis in Solanum peruvianum, Through a Tomato Mottle Virus VIGS Assay.
Esparza-Araiza MJ, Bañuelos-Hernández B, Argüello-Astorga GR, Lara-Ávila JP, Goodwin PH, Isordia-Jasso MI, Castillo-Collazo R, Rougon-Cardoso A, Alpuche-Solís ÁG., Front Plant Sci 6(), 2015
PMID: 26734014
Esparza-Araiza MJ, Bañuelos-Hernández B, Argüello-Astorga GR, Lara-Ávila JP, Goodwin PH, Isordia-Jasso MI, Castillo-Collazo R, Rougon-Cardoso A, Alpuche-Solís ÁG., Front Plant Sci 6(), 2015
PMID: 26734014
Studies on the colonization of axenically grown tomato plants by a GFP-tagged strain of Clavibacter michiganensis subsp. michiganensis
Lelis FMV, Czajkowski R, de Souza RM, Ribeiro DH, van der Wolf JM., Eur J Plant Pathol 139(1), 2014
PMID: IND500743147
Lelis FMV, Czajkowski R, de Souza RM, Ribeiro DH, van der Wolf JM., Eur J Plant Pathol 139(1), 2014
PMID: IND500743147
Comparative genome analysis of pathogenic and non-pathogenic Clavibacter strains reveals adaptations to their lifestyle.
Załuga J, Stragier P, Baeyen S, Haegeman A, Van Vaerenbergh J, Maes M, De Vos P., BMC Genomics 15(), 2014
PMID: 24885539
Załuga J, Stragier P, Baeyen S, Haegeman A, Van Vaerenbergh J, Maes M, De Vos P., BMC Genomics 15(), 2014
PMID: 24885539
Temperature at the early stages of Clavibacter michiganensis subsp. michiganensis infection affects bacterial canker development and virulence gene expression
Sharabani G, Manulis‐Sasson S, Chalupowicz L, Borenstein M, Shulhani R, Lofthouse M, Sofer M, Frenkel O, Dror O, Shtienberg D., Plant Pathol 63(5), 2014
PMID: IND600815962
Sharabani G, Manulis‐Sasson S, Chalupowicz L, Borenstein M, Shulhani R, Lofthouse M, Sofer M, Frenkel O, Dror O, Shtienberg D., Plant Pathol 63(5), 2014
PMID: IND600815962
Genetic diversity of non-pathogenic Clavibacter strains isolated from tomato seeds.
Zaluga J, Van Vaerenbergh J, Stragier P, Maes M, De Vos P., Syst Appl Microbiol 36(6), 2013
PMID: 23768656
Zaluga J, Van Vaerenbergh J, Stragier P, Maes M, De Vos P., Syst Appl Microbiol 36(6), 2013
PMID: 23768656
New type of antimicrobial protein produced by the plant pathogen Clavibacter michiganensis subsp. michiganensis.
Liu Z, Ma P, Holtsmark I, Skaugen M, Eijsink VG, Brurberg MB., Appl Environ Microbiol 79(18), 2013
PMID: 23851100
Liu Z, Ma P, Holtsmark I, Skaugen M, Eijsink VG, Brurberg MB., Appl Environ Microbiol 79(18), 2013
PMID: 23851100
Tomato fruit and seed colonization by Clavibacter michiganensis subsp. michiganensis through external and internal routes.
Tancos MA, Chalupowicz L, Barash I, Manulis-Sasson S, Smart CD., Appl Environ Microbiol 79(22), 2013
PMID: 24014525
Tancos MA, Chalupowicz L, Barash I, Manulis-Sasson S, Smart CD., Appl Environ Microbiol 79(22), 2013
PMID: 24014525
Understanding alternative fluxes/effluxes through comparative metabolic pathway analysis of phylum actinobacteria using a simplified approach.
Verma M, Lal D, Saxena A, Anand S, Kaur J, Kaur J, Lal R., Gene 531(2), 2013
PMID: 24055419
Verma M, Lal D, Saxena A, Anand S, Kaur J, Kaur J, Lal R., Gene 531(2), 2013
PMID: 24055419
Genome-wide transcriptome analysis of Clavibacter michiganensis subsp. michiganensis grown in xylem mimicking medium.
Hiery E, Adam S, Reid S, Hofmann J, Sonnewald S, Burkovski A., J Biotechnol 168(4), 2013
PMID: 24060828
Hiery E, Adam S, Reid S, Hofmann J, Sonnewald S, Burkovski A., J Biotechnol 168(4), 2013
PMID: 24060828
Nitrogen starvation-induced transcriptome alterations and influence of transcription regulator mutants in Mycobacterium smegmatis.
Jeßberger N, Lu Y, Amon J, Titgemeyer F, Sonnewald S, Reid S, Burkovski A., BMC Res Notes 6(), 2013
PMID: 24266988
Jeßberger N, Lu Y, Amon J, Titgemeyer F, Sonnewald S, Reid S, Burkovski A., BMC Res Notes 6(), 2013
PMID: 24266988
Loop-mediated amplification of the Clavibacter michiganensis subsp. michiganensis micA gene is highly specific.
Yasuhara-Bell J, Kubota R, Jenkins DM, Alvarez AM., Phytopathology 103(12), 2013
PMID: 23802869
Yasuhara-Bell J, Kubota R, Jenkins DM, Alvarez AM., Phytopathology 103(12), 2013
PMID: 23802869
Over-expression of snakin-2 and extensin-like protein genes restricts pathogen invasiveness and enhances tolerance to Clavibacter michiganensis subsp. michiganensis in transgenic tomato (Solanum lycopersicum).
Balaji V, Smart CD., Transgenic Res 21(1), 2012
PMID: 21479554
Balaji V, Smart CD., Transgenic Res 21(1), 2012
PMID: 21479554
Colonization and movement of GFP-labeled Clavibacter michiganensis subsp. michiganensis during tomato infection.
Chalupowicz L, Zellermann EM, Fluegel M, Dror O, Eichenlaub R, Gartemann KH, Savidor A, Sessa G, Iraki N, Barash I, Manulis-Sasson S., Phytopathology 102(1), 2012
PMID: 21879791
Chalupowicz L, Zellermann EM, Fluegel M, Dror O, Eichenlaub R, Gartemann KH, Savidor A, Sessa G, Iraki N, Barash I, Manulis-Sasson S., Phytopathology 102(1), 2012
PMID: 21879791
Colonization of tomato seedlings by bioluminescent Clavibacter michiganensis subsp. michiganensis under different humidity regimes.
Xu X, Rajashekara G, Paul PA, Miller SA., Phytopathology 102(2), 2012
PMID: 21936661
Xu X, Rajashekara G, Paul PA, Miller SA., Phytopathology 102(2), 2012
PMID: 21936661
Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.
Gao B, Gupta RS., Microbiol Mol Biol Rev 76(1), 2012
PMID: 22390973
Gao B, Gupta RS., Microbiol Mol Biol Rev 76(1), 2012
PMID: 22390973
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A., BMC Genomics 13(), 2012
PMID: 22443545
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A., BMC Genomics 13(), 2012
PMID: 22443545
Genome-enabled perspectives on the composition, evolution, and expression of virulence determinants in bacterial plant pathogens.
Lindeberg M., Annu Rev Phytopathol 50(), 2012
PMID: 22559066
Lindeberg M., Annu Rev Phytopathol 50(), 2012
PMID: 22559066
Characterization of phenotypic variants of Clavibacter michiganensis subsp. michiganensis isolated from Capsicum annuum
Yim KO, Lee HI, Kim JH, Lee SD, Cho JH, Cha JS., Eur J Plant Pathol 133(3), 2012
PMID: IND44685588
Yim KO, Lee HI, Kim JH, Lee SD, Cho JH, Cha JS., Eur J Plant Pathol 133(3), 2012
PMID: IND44685588
Phylogenetic analysis and polyphasic characterization of Clavibacter michiganensis strains isolated from tomato seeds reveal that nonpathogenic strains are distinct from C. michiganensis subsp. michiganensis.
Jacques MA, Durand K, Orgeur G, Balidas S, Fricot C, Bonneau S, Quillévéré A, Audusseau C, Olivier V, Grimault V, Mathis R., Appl Environ Microbiol 78(23), 2012
PMID: 23001675
Jacques MA, Durand K, Orgeur G, Balidas S, Fricot C, Bonneau S, Quillévéré A, Audusseau C, Olivier V, Grimault V, Mathis R., Appl Environ Microbiol 78(23), 2012
PMID: 23001675
Characterization of Clavibacter michiganensis subsp. michiganensis strains from recent outbreaks of bacterial wilt and canker in Serbia
Milijašević-Marčić S, Gartemann KH, Frohwitter J, Eichenlaub R, Todorović B, Rekanović E, Potočnik I., Eur J Plant Pathol 134(4), 2012
PMID: IND500598028
Milijašević-Marčić S, Gartemann KH, Frohwitter J, Eichenlaub R, Todorović B, Rekanović E, Potočnik I., Eur J Plant Pathol 134(4), 2012
PMID: IND500598028
The Clavibacter michiganensis subspecies: molecular investigation of gram-positive bacterial plant pathogens.
Eichenlaub R, Gartemann KH., Annu Rev Phytopathol 49(), 2011
PMID: 21438679
Eichenlaub R, Gartemann KH., Annu Rev Phytopathol 49(), 2011
PMID: 21438679
Genomic and molecular analysis of phage CMP1 from Clavibacter michiganensis subspecies michiganensis.
Wittmann J, Gartemann KH, Eichenlaub R, Dreiseikelmann B., Bacteriophage 1(1), 2011
PMID: 21687530
Wittmann J, Gartemann KH, Eichenlaub R, Dreiseikelmann B., Bacteriophage 1(1), 2011
PMID: 21687530
Further Identification of Novel Lantibiotic Operons Using LanM-Based Genome Mining.
O'Sullivan O, Begley M, Ross RP, Cotter PD, Hill C., Probiotics Antimicrob Proteins 3(1), 2011
PMID: 26781497
O'Sullivan O, Begley M, Ross RP, Cotter PD, Hill C., Probiotics Antimicrob Proteins 3(1), 2011
PMID: 26781497
Genetic diversity and population structure of Clavibacter michiganensis subsp. nebraskensis.
Agarkova IV, Lambrecht PA, Vidaver AK., Can J Microbiol 57(5), 2011
PMID: 21510777
Agarkova IV, Lambrecht PA, Vidaver AK., Can J Microbiol 57(5), 2011
PMID: 21510777
Plant pathogens as a source of diverse enzymes for lignocellulose digestion.
Gibson DM, King BC, Hayes ML, Bergstrom GC., Curr Opin Microbiol 14(3), 2011
PMID: 21536481
Gibson DM, King BC, Hayes ML, Bergstrom GC., Curr Opin Microbiol 14(3), 2011
PMID: 21536481
The influence of the accessory genome on bacterial pathogen evolution.
Jackson RW, Vinatzer B, Arnold DL, Dorus S, Murillo J., Mob Genet Elements 1(1), 2011
PMID: 22016845
Jackson RW, Vinatzer B, Arnold DL, Dorus S, Murillo J., Mob Genet Elements 1(1), 2011
PMID: 22016845
Draft Genome Sequences of Xanthomonas sacchari and Two Banana-Associated Xanthomonads Reveal Insights into the Xanthomonas Group 1 Clade.
Studholme DJ, Wasukira A, Paszkiewicz K, Aritua V, Thwaites R, Smith J, Grant M., Genes (Basel) 2(4), 2011
PMID: 24710305
Studholme DJ, Wasukira A, Paszkiewicz K, Aritua V, Thwaites R, Smith J, Grant M., Genes (Basel) 2(4), 2011
PMID: 24710305
The Gram-positive side of plant-microbe interactions.
Francis I, Holsters M, Vereecke D., Environ Microbiol 12(1), 2010
PMID: 19624707
Francis I, Holsters M, Vereecke D., Environ Microbiol 12(1), 2010
PMID: 19624707
Genome sequence of the Fleming strain of Micrococcus luteus, a simple free-living actinobacterium.
Young M, Artsatbanov V, Beller HR, Chandra G, Chater KF, Dover LG, Goh EB, Kahan T, Kaprelyants AS, Kyrpides N, Lapidus A, Lowry SR, Lykidis A, Mahillon J, Markowitz V, Mavromatis K, Mukamolova GV, Oren A, Rokem JS, Smith MC, Young DI, Greenblatt CL., J Bacteriol 192(3), 2010
PMID: 19948807
Young M, Artsatbanov V, Beller HR, Chandra G, Chater KF, Dover LG, Goh EB, Kahan T, Kaprelyants AS, Kyrpides N, Lapidus A, Lowry SR, Lykidis A, Mahillon J, Markowitz V, Mavromatis K, Mukamolova GV, Oren A, Rokem JS, Smith MC, Young DI, Greenblatt CL., J Bacteriol 192(3), 2010
PMID: 19948807
Proteomic approaches to study plant-pathogen interactions.
Quirino BF, Candido ES, Campos PF, Franco OL, Krüger RH., Phytochemistry 71(4), 2010
PMID: 20005547
Quirino BF, Candido ES, Campos PF, Franco OL, Krüger RH., Phytochemistry 71(4), 2010
PMID: 20005547
The Erwinia amylovora PhoPQ system is involved in resistance to antimicrobial peptide and suppresses gene expression of two novel type III secretion systems.
Nakka S, Qi M, Zhao Y., Microbiol Res 165(8), 2010
PMID: 20116983
Nakka S, Qi M, Zhao Y., Microbiol Res 165(8), 2010
PMID: 20116983
Organization of the biosynthetic genes encoding deoxyactagardine B (DAB), a new lantibiotic produced by Actinoplanes liguriae NCIMB41362.
Boakes S, Appleyard AN, Cortés J, Dawson MJ., J Antibiot (Tokyo) 63(7), 2010
PMID: 20520597
Boakes S, Appleyard AN, Cortés J, Dawson MJ., J Antibiot (Tokyo) 63(7), 2010
PMID: 20520597
An integrated genomics approach to define niche establishment by Rhodococcus fascians.
Depuydt S, Trenkamp S, Fernie AR, Elftieh S, Renou JP, Vuylsteke M, Holsters M, Vereecke D., Plant Physiol 149(3), 2009
PMID: 19118125
Depuydt S, Trenkamp S, Fernie AR, Elftieh S, Renou JP, Vuylsteke M, Holsters M, Vereecke D., Plant Physiol 149(3), 2009
PMID: 19118125
The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies.
Bekel T, Henckel K, Küster H, Meyer F, Mittard Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, Goesmann A., J Biotechnol 140(1-2), 2009
PMID: 19297685
Bekel T, Henckel K, Küster H, Meyer F, Mittard Runte V, Neuweger H, Paarmann D, Rupp O, Zakrzewski M, Pühler A, Stoye J, Goesmann A., J Biotechnol 140(1-2), 2009
PMID: 19297685
Organization of the genes encoding the biosynthesis of actagardine and engineering of a variant generation system.
Boakes S, Cortés J, Appleyard AN, Rudd BA, Dawson MJ., Mol Microbiol 72(5), 2009
PMID: 19400806
Boakes S, Cortés J, Appleyard AN, Rudd BA, Dawson MJ., Mol Microbiol 72(5), 2009
PMID: 19400806
Lifestyles of the effector rich: genome-enabled characterization of bacterial plant pathogens.
Collmer A, Schneider DJ, Lindeberg M., Plant Physiol 150(4), 2009
PMID: 19515788
Collmer A, Schneider DJ, Lindeberg M., Plant Physiol 150(4), 2009
PMID: 19515788
The putative secreted serine protease Chp-7 is required for full virulence and induction of a nonhost hypersensitive response by Clavibacter michiganensis subsp. sepedonicus.
Nissinen R, Xia Y, Mattinen L, Ishimaru CA, Knudson DL, Knudson SE, Metzler M, Pirhonen M., Mol Plant Microbe Interact 22(7), 2009
PMID: 19522563
Nissinen R, Xia Y, Mattinen L, Ishimaru CA, Knudson DL, Knudson SE, Metzler M, Pirhonen M., Mol Plant Microbe Interact 22(7), 2009
PMID: 19522563
Genomes of model organisms: know thy tools.
Galperin MY., Environ Microbiol 10(6), 2008
PMID: 18474084
Galperin MY., Environ Microbiol 10(6), 2008
PMID: 18474084
Virulence mechanisms of Gram-positive plant pathogenic bacteria.
Hogenhout SA, Loria R., Curr Opin Plant Biol 11(4), 2008
PMID: 18639483
Hogenhout SA, Loria R., Curr Opin Plant Biol 11(4), 2008
PMID: 18639483
Characterization of new IS elements and studies of their dispersion in two subspecies of Leifsonia xyli.
Zerillo MM, Van Sluys MA, Camargo LE, Monteiro-Vitorello CB., BMC Microbiol 8(), 2008
PMID: 18655699
Zerillo MM, Van Sluys MA, Camargo LE, Monteiro-Vitorello CB., BMC Microbiol 8(), 2008
PMID: 18655699
Mycothiol: synthesis, biosynthesis and biological functions of the major low molecular weight thiol in actinomycetes.
Jothivasan VK, Hamilton CJ., Nat Prod Rep 25(6), 2008
PMID: 19030604
Jothivasan VK, Hamilton CJ., Nat Prod Rep 25(6), 2008
PMID: 19030604
Activation and manipulation of host responses by a Gram-positive bacterium.
Balaji V, Sessa G., Plant Signal Behav 3(10), 2008
PMID: 19704516
Balaji V, Sessa G., Plant Signal Behav 3(10), 2008
PMID: 19704516
Streptomyces scabies 87-22 possesses a functional tomatinase.
Seipke RF, Loria R., J Bacteriol 190(23), 2008
PMID: 18835993
Seipke RF, Loria R., J Bacteriol 190(23), 2008
PMID: 18835993
60 References
Daten bereitgestellt von Europe PubMed Central.
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ., Nucleic Acids Res. 25(17), 1997
PMID: 9254694
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ., Nucleic Acids Res. 25(17), 1997
PMID: 9254694
AUTHOR UNKNOWN, 2005
Recognition of DNA by Fur: a reinterpretation of the Fur box consensus sequence.
Baichoo N, Helmann JD., J. Bacteriol. 184(21), 2002
PMID: 12374814
Baichoo N, Helmann JD., J. Bacteriol. 184(21), 2002
PMID: 12374814
BACCardI--a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison.
Bartels D, Kespohl S, Albaum S, Druke T, Goesmann A, Herold J, Kaiser O, Puhler A, Pfeiffer F, Raddatz G, Stoye J, Meyer F, Schuster SC., Bioinformatics 21(7), 2004
PMID: 15514001
Bartels D, Kespohl S, Albaum S, Druke T, Goesmann A, Herold J, Kaiser O, Puhler A, Pfeiffer F, Raddatz G, Stoye J, Meyer F, Schuster SC., Bioinformatics 21(7), 2004
PMID: 15514001
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2).
Bentley SD, Chater KF, Cerdeno-Tarraga AM, Challis GL, Thomson NR, James KD, Harris DE, Quail MA, Kieser H, Harper D, Bateman A, Brown S, Chandra G, Chen CW, Collins M, Cronin A, Fraser A, Goble A, Hidalgo J, Hornsby T, Howarth S, Huang CH, Kieser T, Larke L, Murphy L, Oliver K, O'Neil S, Rabbinowitsch E, Rajandream MA, Rutherford K, Rutter S, Seeger K, Saunders D, Sharp S, Squares R, Squares S, Taylor K, Warren T, Wietzorrek A, Woodward J, Barrell BG, Parkhill J, Hopwood DA., Nature 417(6885), 2002
PMID: 12000953
Bentley SD, Chater KF, Cerdeno-Tarraga AM, Challis GL, Thomson NR, James KD, Harris DE, Quail MA, Kieser H, Harper D, Bateman A, Brown S, Chandra G, Chen CW, Collins M, Cronin A, Fraser A, Goble A, Hidalgo J, Hornsby T, Howarth S, Huang CH, Kieser T, Larke L, Murphy L, Oliver K, O'Neil S, Rabbinowitsch E, Rajandream MA, Rutherford K, Rutter S, Seeger K, Saunders D, Sharp S, Squares R, Squares S, Taylor K, Warren T, Wietzorrek A, Woodward J, Barrell BG, Parkhill J, Hopwood DA., Nature 417(6885), 2002
PMID: 12000953
AUTHOR UNKNOWN, 1996
AUTHOR UNKNOWN, 2004
A saponin-detoxifying enzyme mediates suppression of plant defences.
Bouarab K, Melton R, Peart J, Baulcombe D, Osbourn A., Nature 418(6900), 2002
PMID: 12192413
Bouarab K, Melton R, Peart J, Baulcombe D, Osbourn A., Nature 418(6900), 2002
PMID: 12192413
Identification of homologues to the pathogenicity factor Pat-1, a putative serine protease of Clavibacter michiganensis subsp. michiganensis.
Burger A, Grafen I, Engemann J, Niermann E, Pieper M, Kirchner O, Gartemann KH, Eichenlaub R., Microbiol. Res. 160(4), 2005
PMID: 16255147
Burger A, Grafen I, Engemann J, Niermann E, Pieper M, Kirchner O, Gartemann KH, Eichenlaub R., Microbiol. Res. 160(4), 2005
PMID: 16255147
ACT: the Artemis Comparison Tool.
Carver TJ, Rutherford KM, Berriman M, Rajandream MA, Barrell BG, Parkhill J., Bioinformatics 21(16), 2005
PMID: 15976072
Carver TJ, Rutherford KM, Berriman M, Rajandream MA, Barrell BG, Parkhill J., Bioinformatics 21(16), 2005
PMID: 15976072
AUTHOR UNKNOWN, 1984
AUTHOR UNKNOWN, 1995
Characterization of the plasmid encoded virulence region pat-1 of phytopathogenic Clavibacter michiganensis subsp. michiganensis.
Dreier J, Meletzus D, Eichenlaub R., Mol. Plant Microbe Interact. 10(2), 1997
PMID: 9057325
Dreier J, Meletzus D, Eichenlaub R., Mol. Plant Microbe Interact. 10(2), 1997
PMID: 9057325
AUTHOR UNKNOWN, 2006
Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of 'Corynebacterium aquaticum' Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov., nom. rev., comb. nov. and Clavibacter xyli Davis et al. 1984 with two subspecies as Leifsonia xyli (Davis et al. 1984) gen. nov., comb. nov.
Evtushenko LI, Dorofeeva LV, Subbotin SA, Cole JR, Tiedje JM., Int. J. Syst. Evol. Microbiol. 50 Pt 1(), 2000
PMID: 10826825
Evtushenko LI, Dorofeeva LV, Subbotin SA, Cole JR, Tiedje JM., Int. J. Syst. Evol. Microbiol. 50 Pt 1(), 2000
PMID: 10826825
Base-calling of automated sequencer traces using phred. II. Error probabilities.
Ewing B, Green P., Genome Res. 8(3), 1998
PMID: 9521922
Ewing B, Green P., Genome Res. 8(3), 1998
PMID: 9521922
Base-calling of automated sequencer traces using phred. I. Accuracy assessment.
Ewing B, Hillier L, Wendl MC, Green P., Genome Res. 8(3), 1998
PMID: 9521921
Ewing B, Hillier L, Wendl MC, Green P., Genome Res. 8(3), 1998
PMID: 9521921
Survival of Clavibacter michiganensis ssp. michiganensis in infected tomato stems under natural field conditions in California, Ohio and Morocco.
Fatmi M, Schaad NW., Plant Pathol. 51(2), 2002
PMID: IND23274115
Fatmi M, Schaad NW., Plant Pathol. 51(2), 2002
PMID: IND23274115
Two transcriptional regulators GlnR and GlnRII are involved in regulation of nitrogen metabolism in Streptomyces coelicolor A3(2).
Fink D, Weissschuh N, Reuther J, Wohlleben W, Engels A., Mol. Microbiol. 46(2), 2002
PMID: 12406212
Fink D, Weissschuh N, Reuther J, Wohlleben W, Engels A., Mol. Microbiol. 46(2), 2002
PMID: 12406212
Isolation and characterization of IS1409, an insertion element of 4-chlorobenzoate-degrading Arthrobacter sp. strain TM1, and development of a system for transposon mutagenesis.
Gartemann KH, Eichenlaub R., J. Bacteriol. 183(12), 2001
PMID: 11371537
Gartemann KH, Eichenlaub R., J. Bacteriol. 183(12), 2001
PMID: 11371537
Consed: a graphical tool for sequence finishing.
Gordon D, Abajian C, Green P., Genome Res. 8(3), 1998
PMID: 9521923
Gordon D, Abajian C, Green P., Genome Res. 8(3), 1998
PMID: 9521923
Automated finishing with autofinish.
Gordon D, Desmarais C, Green P., Genome Res. 11(4), 2001
PMID: 11282977
Gordon D, Desmarais C, Green P., Genome Res. 11(4), 2001
PMID: 11282977
Purification, characterization, and gene sequence of michiganin A, an actagardine-like lantibiotic produced by the tomato pathogen Clavibacter michiganensis subsp. michiganensis.
Holtsmark I, Mantzilas D, Eijsink VG, Brurberg MB., Appl. Environ. Microbiol. 72(9), 2006
PMID: 16957199
Holtsmark I, Mantzilas D, Eijsink VG, Brurberg MB., Appl. Environ. Microbiol. 72(9), 2006
PMID: 16957199
AUTHOR UNKNOWN, 2000
Effect of solar UV-B radiation on a phyllosphere bacterial community.
Jacobs JL, Sundin GW., Appl. Environ. Microbiol. 67(12), 2001
PMID: 11722897
Jacobs JL, Sundin GW., Appl. Environ. Microbiol. 67(12), 2001
PMID: 11722897
AUTHOR UNKNOWN, 2000
Structural elements of the Streptomyces oriC region and their interactions with the DnaA protein.
Jakimowicz D, Majka J, Messer W, Speck C, Fernandez M, Martin MC, Sanchez J, Schauwecker F, Keller U, Schrempf H, Zakrzewska-Czerwinska J., Microbiology (Reading, Engl.) 144 ( Pt 5)(), 1998
PMID: 9611803
Jakimowicz D, Majka J, Messer W, Speck C, Fernandez M, Martin MC, Sanchez J, Schauwecker F, Keller U, Schrempf H, Zakrzewska-Czerwinska J., Microbiology (Reading, Engl.) 144 ( Pt 5)(), 1998
PMID: 9611803
LeSBT1, a subtilase from tomato plants. Overexpression in insect cells, purification, and characterization.
Janzik I, Macheroux P, Amrhein N, Schaller A., J. Biol. Chem. 275(7), 2000
PMID: 10671566
Janzik I, Macheroux P, Amrhein N, Schaller A., J. Biol. Chem. 275(7), 2000
PMID: 10671566
A genomic cluster containing four differentially regulated subtilisin-like processing protease genes is in tomato plants.
Jorda L, Coego A, Conejero V, Vera P., J. Biol. Chem. 274(4), 1999
PMID: 9891003
Jorda L, Coego A, Conejero V, Vera P., J. Biol. Chem. 274(4), 1999
PMID: 9891003
Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique.
Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Puhler A, Meyer F., J. Biotechnol. 106(2-3), 2003
PMID: 14651855
Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Puhler A, Meyer F., J. Biotechnol. 106(2-3), 2003
PMID: 14651855
Identification and characterization of iron-regulated Bordetella pertussis alcaligin siderophore biosynthesis genes.
Kang HY, Brickman TJ, Beaumont FC, Armstrong SK., J. Bacteriol. 178(16), 1996
PMID: 8759851
Kang HY, Brickman TJ, Beaumont FC, Armstrong SK., J. Bacteriol. 178(16), 1996
PMID: 8759851
Identification of a tomatinase in the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382.
Kaup O, Grafen I, Zellermann EM, Eichenlaub R, Gartemann KH., Mol. Plant Microbe Interact. 18(10), 2005
PMID: 16255248
Kaup O, Grafen I, Zellermann EM, Eichenlaub R, Gartemann KH., Mol. Plant Microbe Interact. 18(10), 2005
PMID: 16255248
A large, mobile pathogenicity island confers plant pathogenicity on Streptomyces species.
Kers JA, Cameron KD, Joshi MV, Bukhalid RA, Morello JE, Wach MJ, Gibson DM, Loria R., Mol. Microbiol. 55(4), 2005
PMID: 15686551
Kers JA, Cameron KD, Joshi MV, Bukhalid RA, Morello JE, Wach MJ, Gibson DM, Loria R., Mol. Microbiol. 55(4), 2005
PMID: 15686551
A highly efficient transposon mutagenesis system for the tomato pathogen Clavibacter michiganensis subsp. michiganensis.
Kirchner O, Gartemann KH, Zellermann EM, Eichenlaub R, Burger A., Mol. Plant Microbe Interact. 14(11), 2001
PMID: 11763129
Kirchner O, Gartemann KH, Zellermann EM, Eichenlaub R, Burger A., Mol. Plant Microbe Interact. 14(11), 2001
PMID: 11763129
Trends between gene content and genome size in prokaryotic species with larger genomes.
Konstantinidis KT, Tiedje JM., Proc. Natl. Acad. Sci. U.S.A. 101(9), 2004
PMID: 14973198
Konstantinidis KT, Tiedje JM., Proc. Natl. Acad. Sci. U.S.A. 101(9), 2004
PMID: 14973198
Stable transformation of the gram-positive phytopathogenic bacterium Clavibacter michiganensis subsp. sepedonicus with several cloning vectors.
Laine MJ, Nakhei H, Dreier J, Lehtila K, Meletzus D, Eichenlaub R, Metzler MC., Appl. Environ. Microbiol. 62(5), 1996
PMID: 8633849
Laine MJ, Nakhei H, Dreier J, Lehtila K, Meletzus D, Eichenlaub R, Metzler MC., Appl. Environ. Microbiol. 62(5), 1996
PMID: 8633849
Characterization of specific nucleotide substitutions in DtxR-specific operators of Corynebacterium diphtheriae that dramatically affect DtxR binding, operator function, and promoter strength.
Lee JH, Holmes RK., J. Bacteriol. 182(2), 2000
PMID: 10629190
Lee JH, Holmes RK., J. Bacteriol. 182(2), 2000
PMID: 10629190
Whole-genome analysis of transporters in the plant pathogen Xylella fastidiosa.
Meidanis J, Braga MD, Verjovski-Almeida S., Microbiol. Mol. Biol. Rev. 66(2), 2002
PMID: 12040127
Meidanis J, Braga MD, Verjovski-Almeida S., Microbiol. Mol. Biol. Rev. 66(2), 2002
PMID: 12040127
Transformation of the phytopathogenic bacterium Clavibacter michiganense subsp. michiganense by electroporation and development of a cloning vector.
Meletzus D, Eichenlaub R., J. Bacteriol. 173(1), 1991
PMID: 1898919
Meletzus D, Eichenlaub R., J. Bacteriol. 173(1), 1991
PMID: 1898919
Evidence for plasmid-encoded virulence factors in the phytopathogenic bacterium Clavibacter michiganensis subsp. michiganensis NCPPB382.
Meletzus D, Bermphol A, Dreier J, Eichenlaub R., J. Bacteriol. 175(7), 1993
PMID: 8458855
Meletzus D, Bermphol A, Dreier J, Eichenlaub R., J. Bacteriol. 175(7), 1993
PMID: 8458855
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Functions of the membrane-associated and cytoplasmic malate dehydrogenases in the citric acid cycle of Corynebacterium glutamicum.
Molenaar D, van der Rest ME, Drysch A, Yucel R., J. Bacteriol. 182(24), 2000
PMID: 11092846
Molenaar D, van der Rest ME, Drysch A, Yucel R., J. Bacteriol. 182(24), 2000
PMID: 11092846
The genome sequence of the gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli.
Monteiro-Vitorello CB, Camargo LE, Van Sluys MA, Kitajima JP, Truffi D, do Amaral AM, Harakava R, de Oliveira JC, Wood D, de Oliveira MC, Miyaki C, Takita MA, da Silva AC, Furlan LR, Carraro DM, Camarotte G, Almeida NF Jr, Carrer H, Coutinho LL, El-Dorry HA, Ferro MI, Gagliardi PR, Giglioti E, Goldman MH, Goldman GH, Kimura ET, Ferro ES, Kuramae EE, Lemos EG, Lemos MV, Mauro SM, Machado MA, Marino CL, Menck CF, Nunes LR, Oliveira RC, Pereira GG, Siqueira W, de Souza AA, Tsai SM, Zanca AS, Simpson AJ, Brumbley SM, Setubal JC., Mol. Plant Microbe Interact. 17(8), 2004
PMID: 15305603
Monteiro-Vitorello CB, Camargo LE, Van Sluys MA, Kitajima JP, Truffi D, do Amaral AM, Harakava R, de Oliveira JC, Wood D, de Oliveira MC, Miyaki C, Takita MA, da Silva AC, Furlan LR, Carraro DM, Camarotte G, Almeida NF Jr, Carrer H, Coutinho LL, El-Dorry HA, Ferro MI, Gagliardi PR, Giglioti E, Goldman MH, Goldman GH, Kimura ET, Ferro ES, Kuramae EE, Lemos EG, Lemos MV, Mauro SM, Machado MA, Marino CL, Menck CF, Nunes LR, Oliveira RC, Pereira GG, Siqueira W, de Souza AA, Tsai SM, Zanca AS, Simpson AJ, Brumbley SM, Setubal JC., Mol. Plant Microbe Interact. 17(8), 2004
PMID: 15305603
Metal ion homeostasis in Bacillus subtilis.
Moore CM, Helmann JD., Curr. Opin. Microbiol. 8(2), 2005
PMID: 15802251
Moore CM, Helmann JD., Curr. Opin. Microbiol. 8(2), 2005
PMID: 15802251
New insights to the function of phytopathogenic bacterial type III effectors in plants.
Mudgett MB., Annu Rev Plant Biol 56(), 2005
PMID: 15862106
Mudgett MB., Annu Rev Plant Biol 56(), 2005
PMID: 15862106
Distribution of thiols in microorganisms: mycothiol is a major thiol in most actinomycetes.
Newton GL, Arnold K, Price MS, Sherrill C, Delcardayre SB, Aharonowitz Y, Cohen G, Davies J, Fahey RC, Davis C., J. Bacteriol. 178(7), 1996
PMID: 8606174
Newton GL, Arnold K, Price MS, Sherrill C, Delcardayre SB, Aharonowitz Y, Cohen G, Davies J, Fahey RC, Davis C., J. Bacteriol. 178(7), 1996
PMID: 8606174
Suprageneric classification of peptidoglycan group B actinomycetes by nucleotide sequencing of 5S ribosomal RNA.
Park YH, Suzuki K, Yim DG, Lee KC, Kim E, Yoon J, Kim S, Kho YH, Goodfellow M, Komagata K., Antonie Van Leeuwenhoek 64(3-4), 1993
PMID: 8085792
Park YH, Suzuki K, Yim DG, Lee KC, Kim E, Yoon J, Kim S, Kho YH, Goodfellow M, Komagata K., Antonie Van Leeuwenhoek 64(3-4), 1993
PMID: 8085792
Chromosome topology and genome size of selected actinomycetes species.
Redenbach M, Scheel J, Schmidt U., Antonie Van Leeuwenhoek 78(3-4), 2000
PMID: 11386344
Redenbach M, Scheel J, Schmidt U., Antonie Van Leeuwenhoek 78(3-4), 2000
PMID: 11386344
A functional-phylogenetic classification system for transmembrane solute transporters.
Saier MH Jr., Microbiol. Mol. Biol. Rev. 64(2), 2000
PMID: 10839820
Saier MH Jr., Microbiol. Mol. Biol. Rev. 64(2), 2000
PMID: 10839820
AUTHOR UNKNOWN, 1989
The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.
Schell MA, Karmirantzou M, Snel B, Vilanova D, Berger B, Pessi G, Zwahlen MC, Desiere F, Bork P, Delley M, Pridmore RD, Arigoni F., Proc. Natl. Acad. Sci. U.S.A. 99(22), 2002
PMID: 12381787
Schell MA, Karmirantzou M, Snel B, Vilanova D, Berger B, Pessi G, Zwahlen MC, Desiere F, Bork P, Delley M, Pridmore RD, Arigoni F., Proc. Natl. Acad. Sci. U.S.A. 99(22), 2002
PMID: 12381787
The bidirectional transfer of DNA and RNA to nitrocellulose or diazobenzyloxymethyl-paper.
Smith GE, Summers MD., Anal. Biochem. 109(1), 1980
PMID: 6162401
Smith GE, Summers MD., Anal. Biochem. 109(1), 1980
PMID: 6162401
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.
Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV., Nature 406(6799), 2000
PMID: 10984043
Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV., Nature 406(6799), 2000
PMID: 10984043
AUTHOR UNKNOWN, 1969
Strategy to sequence the genome of Corynebacterium glutamicum ATCC 13032: use of a cosmid and a bacterial artificial chromosome library.
Tauch A, Homann I, Mormann S, Ruberg S, Billault A, Bathe B, Brand S, Brockmann-Gretza O, Ruckert C, Schischka N, Wrenger C, Hoheisel J, Mockel B, Huthmacher K, Pfefferle W, Puhler A, Kalinowski J., J. Biotechnol. 95(1), 2002
PMID: 11879709
Tauch A, Homann I, Mormann S, Ruberg S, Billault A, Bathe B, Brand S, Brockmann-Gretza O, Ruckert C, Schischka N, Wrenger C, Hoheisel J, Mockel B, Huthmacher K, Pfefferle W, Puhler A, Kalinowski J., J. Biotechnol. 95(1), 2002
PMID: 11879709
Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence.
Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klosgen U, Patschkowski T, Ruckert C, Rupp O, Schneiker S, Schuster SC, Vorholter FJ, Weber E, Puhler A, Bonas U, Bartels D, Kaiser O., J. Bacteriol. 187(21), 2005
PMID: 16237009
Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klosgen U, Patschkowski T, Ruckert C, Rupp O, Schneiker S, Schuster SC, Vorholter FJ, Weber E, Puhler A, Bonas U, Bartels D, Kaiser O., J. Bacteriol. 187(21), 2005
PMID: 16237009
AUTHOR UNKNOWN, 1997
AUTHOR UNKNOWN, 1987
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