Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence

Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, et al. (2005)
JOURNAL OF BACTERIOLOGY 187(21): 7254-7266.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Thieme, F; Koebnik, R; Bekel, T; Berger, C; Boch, J; Buttner, D; Caldana, C; Gaigalat, L; Goesmann, AlexanderUniBi ; Kay, S; Kirchner, O; Lanz, C
Abstract / Bemerkung
The gram-negative plant-pathogenic bacterium Xanthomonas campestris pv. vesicatoria is the causative agent of bacterial spot disease in pepper and tomato plants, which leads to economically important yield losses. This pathosystem has become a well-established model for studying bacterial infection strategies. Here, we present the whole-genome sequence of the pepper-pathogenic Xanthomonas campestris pv. vesicatoria strain 85-10, which comprises a 5.17-Mb circular chromosome and four plasmids. The genome has a high G+C content (64.75%) and signatures of extensive genome plasticity. Whole-genome comparisons revealed a gene order similar to both Xanthomonas axonopodis pv. citri and Xanthomonas campestris pv. campestris and a structure completely different from Xanthomonas oiyzae pv. oryzae. A total of 548 coding sequences (12.2%) are unique to X. campestris pv. vesicatoria. In addition to a type III secretion system, which is essential for pathogenicity, the genome of strain 85-10 encodes all other types of protein secretion systems described so far in gram-negative bacteria. Remarkably, one of the putative type IV secretion systems encoded on the largest plasmid is similar to the Icm/Dot systems of the human pathogens Legionella pneumophild and Coxiella burnetti. Comparisons with other completely sequenced plant pathogens predicted six novel type III effector proteins and several other virulence factors, including adhesins, cell wall-degrading enzymes, and extracellular polysaccharides.
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Thieme F, Koebnik R, Bekel T, et al. Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. JOURNAL OF BACTERIOLOGY. 2005;187(21):7254-7266.
Thieme, F., Koebnik, R., Bekel, T., Berger, C., Boch, J., Buttner, D., Caldana, C., et al. (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. JOURNAL OF BACTERIOLOGY, 187(21), 7254-7266.
Thieme, F, Koebnik, R, Bekel, T, Berger, C, Boch, J, Buttner, D, Caldana, C, et al. 2005. “Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence”. JOURNAL OF BACTERIOLOGY 187 (21): 7254-7266.
Thieme, F., Koebnik, R., Bekel, T., Berger, C., Boch, J., Buttner, D., Caldana, C., Gaigalat, L., Goesmann, A., Kay, S., et al. (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. JOURNAL OF BACTERIOLOGY 187, 7254-7266.
Thieme, F., et al., 2005. Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. JOURNAL OF BACTERIOLOGY, 187(21), p 7254-7266.
F. Thieme, et al., “Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence”, JOURNAL OF BACTERIOLOGY, vol. 187, 2005, pp. 7254-7266.
Thieme, F., Koebnik, R., Bekel, T., Berger, C., Boch, J., Buttner, D., Caldana, C., Gaigalat, L., Goesmann, A., Kay, S., Kirchner, O., Lanz, C., Linke, B., McHardy, A.C., Meyer, F., Mittenhuber, G., Nies, D.H., Niesbach-Klosgen, U., Patschkowski, T., Rückert, C., Rupp, O., Schneiker-Bekel, S., Schuster, S.C., Vorhölter, F.-J., Weber, E., Pühler, A., Bonas, U., Bartels, D., Kaiser, O.: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. JOURNAL OF BACTERIOLOGY. 187, 7254-7266 (2005).
Thieme, F, Koebnik, R, Bekel, T, Berger, C, Boch, J, Buttner, D, Caldana, C, Gaigalat, L, Goesmann, Alexander, Kay, S, Kirchner, O, Lanz, C, Linke, B, McHardy, AC, Meyer, F, Mittenhuber, G, Nies, DH, Niesbach-Klosgen, U, Patschkowski, Thomas, Rückert, Christian, Rupp, O, Schneiker-Bekel, Susanne, Schuster, SC, Vorhölter, Frank-Jörg, Weber, E, Pühler, Alfred, Bonas, U, Bartels, D, and Kaiser, O. “Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence”. JOURNAL OF BACTERIOLOGY 187.21 (2005): 7254-7266.

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The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.
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Regulation of the pehA gene encoding the major polygalacturonase of Xanthomonas campestris by Clp and RpfF.
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The Type III secretion system of Xanthomonas fuscans subsp. fuscans is involved in the phyllosphere colonization process and in transmission to seeds of susceptible beans.
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The rsmA-like gene rsmA(Xcc) of Xanthomonas campestris pv. campestris is involved in the control of various cellular processes, including pathogenesis.
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Vibrio cholerae VciB promotes iron uptake via ferrous iron transporters.
Mey AR, Wyckoff EE, Hoover LA, Fisher CR, Payne SM., J Bacteriol 190(17), 2008
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Plant carbohydrate scavenging through tonB-dependent receptors: a feature shared by phytopathogenic and aquatic bacteria.
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Evolution of the chaperone/usher assembly pathway: fimbrial classification goes Greek.
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Protecting sausages with bacteria instead of salt.
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