Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid

Ortseifen V, Winkler A, Albersmeier A, Wendler S, Pühler A, Kalinowski J, Rückert C (2015)
Journal of Biotechnology 194: 81-83.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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DOI
Autor*in
Ortseifen, VeraUniBi ; Winkler, AnikaUniBi; Albersmeier, AndreasUniBi; Wendler, SergejUniBi; Pühler, AlfredUniBi ; Kalinowski, JörnUniBi; Rückert, ChristianUniBi
Einrichtung
Centrum für Biotechnologie > Institut für Genomforschung und Systembiologie
Centrum für Biotechnologie > Arbeitsgruppe A. Pühler
Centrum für Biotechnologie > Arbeitsgruppe J. Kalinowski
Centrum für Biotechnologie > Graduate Center > Graduate Cluster Industrial Biotechnology
Abstract / Bemerkung
Here we report the complete and finished genome sequence of Streptomyces glaucescens GLA.O (DSM 40922), a natural producer of the alpha-glucosidase inhibitor acarbose, which is used in the treatment of type-2 diabetes mellitus. The genome of S. glaucescens GLA.O consists of two replicons, the chromosome with a size of 7,453,200bp and a G+C content of 73.0% as well as a plasmid named pSglau1 with a size of 170,574bp and a G+C content of 69.06%.
Erscheinungsjahr
2015
Zeitschriftentitel
Journal of Biotechnology
Band
194
Seite(n)
81-83
ISSN
1873-4863
Page URI
https://pub.uni-bielefeld.de/record/2709783

Zitieren

Ortseifen V, Winkler A, Albersmeier A, et al. Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology. 2015;194:81-83.
Ortseifen, V., Winkler, A., Albersmeier, A., Wendler, S., Pühler, A., Kalinowski, J., & Rückert, C. (2015). Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology, 194, 81-83. doi:10.1016/j.jbiotec.2014.11.036
Ortseifen, Vera, Winkler, Anika, Albersmeier, Andreas, Wendler, Sergej, Pühler, Alfred, Kalinowski, Jörn, and Rückert, Christian. 2015. “Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid”. Journal of Biotechnology 194: 81-83.
Ortseifen, V., Winkler, A., Albersmeier, A., Wendler, S., Pühler, A., Kalinowski, J., and Rückert, C. (2015). Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology 194, 81-83.
Ortseifen, V., et al., 2015. Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology, 194, p 81-83.
V. Ortseifen, et al., “Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid”, Journal of Biotechnology, vol. 194, 2015, pp. 81-83.
Ortseifen, V., Winkler, A., Albersmeier, A., Wendler, S., Pühler, A., Kalinowski, J., Rückert, C.: Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology. 194, 81-83 (2015).
Ortseifen, Vera, Winkler, Anika, Albersmeier, Andreas, Wendler, Sergej, Pühler, Alfred, Kalinowski, Jörn, and Rückert, Christian. “Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid”. Journal of Biotechnology 194 (2015): 81-83.

1 Zitation in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110.
Wolf T, Droste J, Gren T, Ortseifen V, Schneiker-Bekel S, Zemke T, Pühler A, Kalinowski J., BMC Genomics 18(1), 2017
PMID: 28743243

28 References

Daten bereitgestellt von Europe PubMed Central.

Identification of stsC, the gene encoding the L-glutamine:scyllo-inosose aminotransferase from streptomycin-producing Streptomycetes.
Ahlert J, Distler J, Mansouri K, Piepersberg W., Arch. Microbiol. 168(2), 1997
PMID: 9238101
The str gene cluster for the biosynthesis of 5'-hydroxystreptomycin in Streptomyces glaucescens GLA.0 (ETH 22794): new operons and evidence for pathway-specific regulation by StrR.
Beyer S, Distler J, Piepersberg W., Mol. Gen. Genet. 250(6), 1996
PMID: 8628239
Chromosomal instability in Streptomyces glaucescens: mapping of streptomycin-sensitive mutants.
Crameri R, Kieser T, Ono H, Sanchez J, Hutter R., J. Gen. Microbiol. 129(2), 1983
PMID: 6573433

AUTHOR UNKNOWN, 0
Nucleotide sequences and heterologous expression of tcmG and tcmP, biosynthetic genes for tetracenomycin C in Streptomyces glaucescens.
Decker H, Motamedi H, Hutchinson CR., J. Bacteriol. 175(12), 1993
PMID: 8509339
Gene cluster for streptomycin biosynthesis in Streptomyces griseus: nucleotide sequence of three genes and analysis of transcriptional activity.
Distler J, Ebert A, Mansouri K, Pissowotzki K, Stockmann M, Piepersberg W., Nucleic Acids Res. 15(19), 1987
PMID: 3118332
Taxonomy of the Streptomyces strain ZG0656 that produces acarviostatin α-amylase inhibitors and analysis of their effects on blood glucose levels in mammalian systems
Geng, J. Appl. Microbiol. 106(), 2009

Gauze, 1957
Viewing and editing assembled sequences using Consed
Gordon, Curr. Protoc. Bioinformatics 11(), 2003
The Streptomyces glaucescens TcmR protein represses transcription of the divergently oriented tcmR and tcmA genes by binding to an intergenic operator region.
Guilfoile PG, Hutchinson CR., J. Bacteriol. 174(11), 1992
PMID: 1592820
Draft genome sequence of Streptomyces coelicoflavus ZG0656 reveals the putative biosynthetic gene cluster of acarviostatin family α-amylase inhibitors.
Guo X, Geng P, Bai F, Bai G, Sun T, Li X, Shi L, Zhong Q., Lett. Appl. Microbiol. 55(2), 2012
PMID: 22691180
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Hydroxystreptomycin production and resistance in Streptomyces glaucescens.
Ono H, Crameri R, Hintermann G, Hutter R., J. Gen. Microbiol. 129(2), 1983
PMID: 6302205
Streptomycin and related aminoglycosides
Piepersberg, 1996
Aminoglycosides and sugar components in other secondary metabolites
Piepersberg, 1997
A guide for the classification of streptomycetes according to selected groups; placement of strains in morphological sections.
PRIDHAM TG, HESSELTINE CW, BENEDICT RG., Appl Microbiol 6(1), 1958
PMID: 13509657
The gac-gene cluster for the production of acarbose from Streptomyces glaucescens GLA.O: identification, isolation and characterization.
Rockser Y, Wehmeier UF., J. Biotechnol. 140(1-2), 2008
PMID: 19059289
Complete genome sequence of the kirromycin producer Streptomyces collinus Tu 365 consisting of a linear chromosome and two linear plasmids.
Ruckert C, Szczepanowski R, Albersmeier A, Goesmann A, Iftime D, Musiol EM, Blin K, Wohlleben W, Puhler A, Kalinowski J, Weber T., J. Biotechnol. 168(4), 2013
PMID: 24140291
Complete genome sequence of the actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin.
Ruckert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkamper A, Puhler A, Biener R, Schwartz D, Kalinowski J., J. Biotechnol. 178(), 2014
PMID: 24637369
Glaucescin, a bacteriocin-like substance from Streptomyces glaucescens.
Schurter W, Kissling-Abderhalden M, Leisinger T., J. Gen. Microbiol. 113(2), 1979
PMID: 512635
Sequencing of high G+C microbial genomes using the ultrafast pyrosequencing technology.
Schwientek P, Szczepanowski R, Ruckert C, Stoye J, Puhler A., J. Biotechnol. 155(1), 2011
PMID: 21536083
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.
Schwientek P, Szczepanowski R, Ruckert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Puhler A., BMC Genomics 13(), 2012
PMID: 22443545
Complete genome sequence of the actinobacterium Amycolatopsis japonica MG417-CF17(T) (=DSM 44213T) producing (S,S)-N,N'-ethylenediaminedisuccinic acid.
Stegmann E, Albersmeier A, Spohn M, Gert H, Weber T, Wohlleben W, Kalinowski J, Ruckert C., J. Biotechnol. 189(), 2014
PMID: 25193710
Nucleotide sequence of the tcmII-tcmIV region of the tetracenomycin C biosynthetic gene cluster of Streptomyces glaucescens and evidence that the tcmN gene encodes a multifunctional cyclase-dehydratase-O-methyl transferase.
Summers RG, Wendt-Pienkowski E, Motamedi H, Hutchinson CR., J. Bacteriol. 174(6), 1992
PMID: 1548230
The tcmVI region of the tetracenomycin C biosynthetic gene cluster of Streptomyces glaucescens encodes the tetracenomycin F1 monooxygenase, tetracenomycin F2 cyclase, and, most likely, a second cyclase.
Summers RG, Wendt-Pienkowski E, Motamedi H, Hutchinson CR., J. Bacteriol. 175(23), 1993
PMID: 8244926
[Metabolic products of microorganisms. 175. Tetracenomycin C (author's transl)].
Weber W, Zahner H, Siebers J, Schroder K, Zeeck A., Arch. Microbiol. 121(2), 1979
PMID: 485765

Weber, 1981

Whitman, 1984
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