243 Publications

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[242]
2017 | Journal Article | PUB-ID: 2914537
Isolation and whole genome analysis of endospore-forming bacteria from heroin.
Kalinowski J, Ahrens B, Al-Dilaimi A, Winkler A, Wibberg D, Schleenbecker U, Rückert C, Wölfel R, Grass G (2017)
Forensic Sci Int Genet 32: 1-6.
PUB | DOI | PubMed | Europe PMC
 
[241]
2017 | Journal Article | PUB-ID: 2913386 PUB | PDF | DOI
 
[240]
2017 | Journal Article | PUB-ID: 2913401
Streptomyces phaeopurpureus Shinobu 1957 (Approved Lists 1980) and Streptomyces griseorubiginosus (Ryabova and Preobrazhenskaya 1957) Pridham et al. 1958 (Approved Lists 1980) are heterotypic subjective synonyms
Kämpfer P, Rückert C, Blom J, Goesmann A, Wink J, Kalinowski J, Glaeser SP (2017)
International Journal of Systematic and Evolutionary Microbiology.
PUB | DOI | WoS | PubMed | Europe PMC
 
[239]
2017 | Journal Article | PUB-ID: 2913406
Genome-wide determination of transcription start sites reveals new insights into promoter structures in the actinomycete Corynebacterium glutamicum.
Albersmeier A, Pfeifer-Sancar K, Rückert C, Kalinowski J (2017)
Journal of Biotechnology 257: 99-109.
PUB | DOI | WoS | PubMed | Europe PMC
 
[238]
2017 | Journal Article | PUB-ID: 2913403
Linking secondary metabolites to biosynthesis genes in the fungal endophyte Cyanodermella asteris: The anti-cancer bisanthraquinone skyrin.
Jahn L, Schafhauser T, Wibberg D, Rückert C, Winkler A, Kulik A, Weber T, Flor L, van Pée K-H, Kalinowski J, Ludwig-Müller J, et al. (2017)
Journal of Biotechnology 257: 233-239.
PUB | DOI | WoS | PubMed | Europe PMC
 
[237]
2017 | Journal Article | PUB-ID: 2913963
Identification and Functional Characterization of Small Alarmone Synthetases in Corynebacterium glutamicum
Ruwe M, Kalinowski J, Persicke M (2017)
Frontiers in Microbiology 8: 1601.
PUB | PDF | DOI
 
[236]
2017 | Journal Article | PUB-ID: 2913400
Actinoalloteichus fjordicus sp. nov. isolated from marine sponges: phenotypic, chemotaxonomic and genomic characterisation.
Nouioui I, Rückert C, Willemse J, van Wezel GP, Klenk H-P, Busche T, Kalinowski J, Bredholt H, Zotchev SB (2017)
Antonie Van Leeuwenhoek. Journal of Microbiology.
PUB | DOI | PubMed | Europe PMC
 
[235]
2017 | Journal Article | PUB-ID: 2913404
Complete Genome Sequence of the Streptococcus gallolyticus subsp. gallolyticus Strain DSM 16831
Grimm I, Dumke J, Vollmer T, Hinse D, Rückert C, Kalinowski J, Knabbe C, Dreier J (2017)
Genome Announcements 5(16).
PUB | DOI | PubMed | Europe PMC
 
[234]
2017 | Journal Article | PUB-ID: 2913367
Corynebacterium glutamicum chassis C1*: Building and testing a novel platform host for synthetic biology and industrial biotechnology
Baumgart M, Unthan S, Kloss R, Radek A, Polen T, Tenhaef N, Müller MF, Küberl A, Siebert D, Brühl N, Marin K, et al. (2017)
ACS Synthetic Biology.
PUB | DOI | PubMed | Europe PMC
 
[233]
2017 | Journal Article | PUB-ID: 2913038
Highly efficient methane generation from untreated microalgae biomass
Klassen V, Blifernez-Klassen O, Wibberg D, Winkler A, Kalinowski J, Posten C, Kruse O (2017)
Biotechnology for Biofuels 10(1): 186.
PUB | PDF | DOI
 
[232]
2017 | Journal Article | PUB-ID: 2913116
The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110
Wolf T, Droste J, Gren T, Ortseifen V, Schneiker-Bekel S, Zemke T, Pühler A, Kalinowski J (2017)
BMC Genomics 18: 62.
PUB | PDF | DOI
 
[231]
2017 | Journal Article | PUB-ID: 2912419
Physiological roles of sigma factor SigD in Corynebacterium glutamicum
Taniguchi H, Busche T, Patschkowski T, Niehaus K, Patek M, Kalinowski J, Wendisch VF (2017)
BMC Microbiology 17: 158.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[230]
2017 | Journal Article | PUB-ID: 2913110 PUB | PDF | DOI
 
[229]
2017 | Journal Article | PUB-ID: 2912973
Oxidative Stickland reactions in an obligate aerobic organism - amino acid catabolism in the Crenarchaeon Sulfolobus solfataricus
Stark H, Wolf J, Albersmeier A, Pham TK, Hofmann JD, Siebers B, Kalinowski J, Wright PC, Neumann-Schaal M, Schomburg D (2017)
FEBS JOURNAL 284(13): 2078-2095.
PUB | DOI | WoS
 
[228]
2017 | Journal Article | PUB-ID: 2912983
Novel Chromosome Organization Pattern in Actinomycetales-Overlapping Replication Cycles Combined with Diploidy
Boehm K, Meyer F, Rhomberg A, Kalinowski J, Donovan C, Bramkamp M (2017)
MBIO 8(3): e00511-17.
PUB | DOI | WoS
 
[227]
2017 | Journal Article | PUB-ID: 2912103
Complete Draft Genome Sequence of the Actinobacterium Nocardiopsis sinuspersici UTMC102 (DSM 45277T), Which Produces Serine Protease.
Tokovenko B, Rückert C, Kalinowski J, Mohammadipanah F, Wink J, Rosenkränzer B, Myronovskyi M, Luzhetskyy A (2017)
Genome Announc 5(20).
PUB | DOI | PubMed | Europe PMC
 
[226]
2017 | Journal Article | PUB-ID: 2911994
Biosynthesis of the beta-Lactone Proteasome Inhibitors Belactosin and Cystargolide
Wolf F, Bauer JS, Bendel TM, Kulik A, Kalinowski J, Gross H, Kaysser L (2017)
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 56(23): 6665-6668.
PUB | DOI | WoS | PubMed | Europe PMC
 
[225]
2017 | Journal Article | PUB-ID: 2909070
New natural products identified by combined genomics-metabolomics profiling of marine Streptomyces sp MP131-18
Paulus C, Rebets Y, Tokovenko B, Nadmid S, Terekhova LP, Myronovskyi M, Zotchev SB, Rückert C, Braig S, Zahler S, Kalinowski J, et al. (2017)
SCIENTIFIC REPORTS 7: 42382.
PUB | DOI | WoS | PubMed | Europe PMC
 
[224]
2017 | Journal Article | PUB-ID: 2911273
Fast and reliable strain characterization of Streptomyces lividans through micro-scale cultivation.
Koepff J, Keller M, Tsolis CK, Busche T, Rückert C, Hamed MB, Anné J, Kalinowski J, Wiechert W, Economou A, Oldiges M (2017)
Biotechnol Bioeng.
PUB | DOI | PubMed | Europe PMC
 
[223]
2017 | Journal Article | PUB-ID: 2911274 PUB | DOI | PubMed | Europe PMC
 
[222]
2017 | Journal Article | PUB-ID: 2911272
Monitoring global protein thiol-oxidation and protein S-mycothiolation in Mycobacterium smegmatis under hypochlorite stress.
Hillion M, Bernhardt J, Busche T, Rossius M, Maaß S, Becher D, Rawat M, Wirtz M, Hell R, Rückert C, Kalinowski J, et al. (2017)
Sci Rep 7(1): 1195.
PUB | DOI | PubMed | Europe PMC
 
[221]
2017 | Journal Article | PUB-ID: 2911017
Transcriptome profiling of the Australian arid-land plant Eremophila serrulata (A.DC.) Druce (Scrophulariaceae) for the identification of monoterpene synthases
Kracht ON, Ammann A-C, Stockmann J, Wibberg D, Kalinowski J, Piotrowski M, Kerr R, Brueck T, Kourist R (2017)
PHYTOCHEMISTRY 136: 15-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[220]
2017 | Journal Article | PUB-ID: 2910668
A Mitochondrial Autonomously Replicating Sequence from Pichia pastoris for Uniform High Level Recombinant Protein Production
Friehs K, Schwarzhans JP, Luttermann T, Wibberg D, Winkler A, Hübner W, Huser T, Kalinowski J (2017)
Frontiers in Microbiology 8: 780.
PUB | PDF | DOI
 
[219]
2017 | Journal Article | PUB-ID: 2910380
New oxaphenalene derivative from marine-derived Streptomyces griseorubens sp ASMR4
Hamed A, Abdel-Razek AS, Frese M, Wibberg D, El-Haddad AF, Ibrahim TMA, Kalinowski J, Sewald N, Shaaban M (2017)
ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES 72(1): 53-62.
PUB | DOI | WoS
 
[218]
2017 | Journal Article | PUB-ID: 2909432 PUB | DOI | WoS
 
[217]
2017 | Journal Article | PUB-ID: 2908076
Whole Genome Sequencing of 39 Invasive Streptococcus pneumoniae Sequence Type 199 Isolates Revealed Switches from Serotype 19A to 15B
Makarewicz O, Lucas M, Brandt C, Herrmann L, Albersmeier A, Rückert C, Blom J, Goesmann A, van der Linden M, Kalinowski J, Pletz MW (2017)
PLoS One 12(1): e0169370.
PUB | DOI | WoS | PubMed | Europe PMC
 
[216]
2017 | Journal Article | PUB-ID: 2908419
Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T
Torres Tejerizo GA, Wibberg D, Winkler A, Ormeño-Orrillo E, Martínez-Romero E, Niehaus K, Pühler A, Kalinowski J, Lagares A, Schlüter A, Pistorio M (2017)
Genome Announcements 5(4): e01513-16.
PUB | PDF | DOI
 
[215]
2016 | Journal Article | PUB-ID: 2904976
Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa)
Blifernez-Klassen O, Wibberg D, Winkler A, Blom J, Goesmann A, Kalinowski J, Kruse O (2016)
Genome Announcements 4(3): e00524-16.
PUB | PDF | DOI
 
[214]
2016 | Journal Article | PUB-ID: 2905947
Corynebacterium crudilactis sp. nov., a new Corynebacterium species isolated from raw cow´s milk.
Zimmermann J, Rückert C, Kalinowski J, Lipski A (2016)
Int J Syst Evol Microbiol 66: 5288-5293.
PUB | DOI | WoS | PubMed | Europe PMC
 
[213]
2016 | Journal Article | PUB-ID: 2907685
Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177T isolated from a marine sponge
Schaffert L, Albersmeier A, Winkler A, Kalinowski J, Zotchev SB, Rückert C (2016)
Standards in Genomic Sciences 11: 91.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[212]
2016 | Journal Article | PUB-ID: 2904989
High-throughput sequencing and graph-based cluster analysis facilitate microsatellite development from a highly complex genome
Shah A, Schielzeth H, Albersmeier A, Kalinowski J, Hoffman J (2016)
Ecology and Evolution 16(6): 5718-5727.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[211]
2016 | Journal Article | PUB-ID: 2907679
Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing
Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K (2016)
Scientific Reports 6: 38952.
PUB | PDF | DOI | WoS
 
[210]
2016 | Conference Abstract | PUB-ID: 2907640
Chassis organism from Corynebacterium glutamicum – Genome reduction as a tool toward improved strains for synthetic biology and industrial biotechnology
Baumgart M, Unthan S, Radek A, Herbst M, Siebert D, Brühl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, et al. (2016)
New Biotechnology 33: S25.
PUB | DOI
 
[209]
2016 | Journal Article | PUB-ID: 2907722
A systems biology approach reveals major metabolic changes in the thermoacidophilic archaeon Sulfolobus solfataricus in response to the carbon source L-fucose versus D-glucose
Wolf J, Stark H, Fafenrot K, Albersmeier A, Pham TK, Mueller KB, Meyer BH, Hoffmann L, Shen L, Albaum SP, Kouril T, et al. (2016)
MOLECULAR MICROBIOLOGY 102(5): 882-908.
PUB | DOI | WoS
 
[208]
2016 | Journal Article | PUB-ID: 2907748 PUB | DOI | WoS | PubMed | Europe PMC
 
[207]
2016 | Journal Article | PUB-ID: 2904704
Complete mitochondrial genome of the scleractinian coral Porites rus
Celis JS, Wibberg D, Winkler A, Wilke T, Kalinowski J (2016)
Mitochondrial DNA 27(5): 3695-3696.
PUB | DOI | WoS | PubMed | Europe PMC
 
[206]
2016 | Journal Article | PUB-ID: 2906720
An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH
Nguyen TV, Wibberg D, Battenberg K, Blom J, Vanden Heuvel B, Berry AM, Kalinowski J, Pawlowski K (2016)
BMC Genomics 17: 796.
PUB | DOI | WoS | PubMed | Europe PMC
 
[205]
2016 | Journal Article | PUB-ID: 2903655
Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization
Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K (2016)
Microbial Cell Factories 15: 84.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[204]
2016 | Journal Article | PUB-ID: 2905632
Corynebacterium glutamicum ggtB encodes a functional gamma-glutamyl transpeptidase with gamma-glutamyl dipeptide synthetic and hydrolytic activity
Walter F, Grenz S, Ortseifen V, Persicke M, Kalinowski J (2016)
Journal of Biotechnology 232: 99-109.
PUB | DOI | WoS | PubMed | Europe PMC
 
[203]
2016 | Journal Article | PUB-ID: 2901243
Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Wolf T, Zemke T, Wehmeier UF, Hecker M, Kalinowski J, et al. (2016)
Journal of Proteomics 131: 140-148.
PUB | DOI | WoS | PubMed | Europe PMC
 
[202]
2016 | Journal Article | PUB-ID: 2905630
Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors
Gren T, Ortseifen V, Wibberg D, Schneiker-Bekel S, Bednarz H, Niehaus K, Zemke T, Persicke M, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 232: 79-88.
PUB | DOI | WoS | PubMed | Europe PMC
 
[201]
2016 | Journal Article | PUB-ID: 2905505
Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System
Wolf T, Gren T, Thieme E, Wibberg D, Zemke T, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 231: 122-128.
PUB | DOI | WoS | PubMed | Europe PMC
 
[200]
2016 | Journal Article | PUB-ID: 2905959
A gene cluster for the biosynthesis of moenomycin family antibiotics in the genome of teicoplanin producer Actinoplanes teichomyceticus
Horbal L, Ostash B, Luzhetskyy A, Walker S, Kalinowski J, Fedorenko V (2016)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 100(17): 7629-7638.
PUB | DOI | WoS | PubMed | Europe PMC
 
[199]
2016 | Journal Article | PUB-ID: 2905634
Deciphering the Transcriptional Response Mediated by the Redox-Sensing System HbpS-SenS-SenR from Streptomycetes
Busche T, Winkler A, Wedderhoff I, Rückert C, Kalinowski J, Lucana DO de O (2016)
PLOS ONE 11(8): e0159873.
PUB | DOI | WoS | PubMed | Europe PMC
 
[198]
2016 | Journal Article | PUB-ID: 2905633
An influence of the copy number of biosynthetic gene clusters on the production level of antibiotics in a heterologous host
Manderscheid N, Bilyk B, Busche T, Kalinowski J, Paululat T, Bechthold A, Petzke L, Luzhetskyy A (2016)
JOURNAL OF BIOTECHNOLOGY 232: 110-117.
PUB | DOI | WoS | PubMed | Europe PMC
 
[197]
2016 | Journal Article | PUB-ID: 2901418
Soil suppressiveness and its relations with the microbial community in a Brazilian subtropical agroecosystem under different management systems
Campos SB, Lisboa BB, Camargo FAO, Bayer C, Sczyrba A, Dirksen P, Albersmeier A, Kalinowski J, Beneduzi A, Costa PB, Passaglia LMP, et al. (2016)
Soil Biology and Biochemistry 96: 191-197.
PUB | DOI | WoS
 
[196]
2016 | Journal Article | PUB-ID: 2901383
Isolation and genome sequencing of four Arctic marine Psychrobacter strains exhibiting multicopper oxidase activity.
Moghadam MS, Albersmeier A, Winkler A, Cimmino L, Rise K, Hohmann-Marriott MF, Kalinowski J, Rückert C, Wentzel A, Lale R (2016)
BMC Genomics 17(1): 117.
PUB | DOI | WoS | PubMed | Europe PMC
 
[195]
2015 | Conference Abstract | PUB-ID: 2902782
Multi-level omics analysis of combination effects of (tri-)azoles in a set of different cell lines
Knebel C, Marx-Stoelting P, Pfeil R, Seeger B, Steinberg P, Mentz A, Bednarz H, Niehaus K, Kalinowski J, Noll T, Heise T (2015)
Toxicology Letters 238(2): S355.
PUB | DOI | WoS
 
[194]
2015 | Journal Article | PUB-ID: 2764185
Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential
Schafhauser T, Wibberg D, Rückert C, Winkler A, Flor L, van Pée K-H, Fewer DP, Sivonen K, Jahn L, Ludwig-Müller J, Caradec T, et al. (2015)
Journal of Biotechnology 211: 101-102.
PUB | DOI | WoS | PubMed | Europe PMC
 
[193]
2015 | Journal Article | PUB-ID: 2732884
Complete genome sequence of Paenibacillus riograndensis SBR5T, a Gram-positive diazotrophic rhizobacterium
Fernandes de Brito L, Bach E, Kalinowski J, Rückert C, Wibberg D, Passaglia L, Wendisch VF (2015)
Journal of Biotechnology 207: 30-31.
PUB | DOI | WoS | PubMed | Europe PMC
 
[192]
2015 | Journal Article | PUB-ID: 2709783
Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid
Ortseifen V, Winkler A, Albersmeier A, Wendler S, Pühler A, Kalinowski J, Rückert C (2015)
Journal of Biotechnology 194: 81-83.
PUB | DOI | WoS | PubMed | Europe PMC
 
[191]
2015 | Journal Article | PUB-ID: 2764307
Comprehensive proteome analysis of Actinoplanes sp SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Walter F, Wolf T, Zemke T, Wehmeier UF, Hecker M, et al. (2015)
Journal of Proteomics 125: 1-16.
PUB | DOI | WoS | PubMed | Europe PMC
 
[190]
2015 | Journal Article | PUB-ID: 2759737 PUB | DOI | WoS | PubMed | Europe PMC
 
[189]
2015 | Journal Article | PUB-ID: 2706344 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[188]
2015 | Journal Article | PUB-ID: 2901251
Diversity of ABBA Prenyltransferases in Marine Streptomyces sp CNQ-509: Promiscuous Enzymes for the Biosynthesis of Mixed Terpenoid Compounds
Leipoldt F, Zeyhle P, Kulik A, Kalinowski J, Heide L, Kaysser L (2015)
Plos One 10(12): e0143237.
PUB | DOI | WoS | PubMed | Europe PMC
 
[187]
2015 | Journal Article | PUB-ID: 2900131
De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite
Pauli M, Chakarov N, Rupp O, Kalinowski J, Goesmann A, Sorenson M, Krüger O, Hoffman J (2015)
BMC Genomics 16: 1038.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[186]
2015 | Journal Article | PUB-ID: 2771746
Complete Genome Sequence of Streptomyces sp. CNQ-509, a Prolific Producer of Meroterpenoid Chemistry
Rückert C, Leipoldt F, Zeyhle P, Fenical W, Jensen PR, Kalinowski J, Heide L, Kaysser L (2015)
Journal of Biotechnology 216: 140-141.
PUB | DOI | WoS | PubMed | Europe PMC
 
[185]
2015 | Journal Article | PUB-ID: 2721868
Genome sequence of the soil bacterium Corynebacterium callunae type strain DSM 20147T
Persicke M, Albersmeier A, Bednarz H, Niehaus K, Kalinowski J, Rückert C (2015)
Standards in Genomic Sciences 10: 5.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[184]
2015 | Journal Article | PUB-ID: 2901032
Biosensor-driven adaptive laboratory evolution of L-valine production in Corynebacterium glutamicum
Mahr R, Gaetgens C, Gaetgens J, Polen T, Kalinowski J, Frunzke J (2015)
Metabolic Engineering 32: 184-194.
PUB | DOI | WoS | PubMed | Europe PMC
 
[183]
2015 | Journal Article | PUB-ID: 2719877
Complete genome sequence of Streptomyces lividans TK24
Rückert C, Albersmeier A, Busche T, Jaenicke S, Winkler A, Friðjónsson ÓH, Hreggviðsson GÓ, Lambert C, Badcock D, Bernaerts K, Anne J, et al. (2015)
Journal of Biotechnology 199: 21-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[182]
2015 | Journal Article | PUB-ID: 2700185
Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana
Al-Dilaimi A, Bednarz H, Lömker A, Niehaus K, Kalinowski J, Rückert C (2015)
International journal of systematic and evolutionary microbiology 65(Pt 1): 177-182.
PUB | DOI | WoS | PubMed | Europe PMC
 
[181]
2015 | Journal Article | PUB-ID: 2689771
Chassis organism from Corynebacterium glutamicum – a top-down approach to identify and delete irrelevant gene clusters
Unthan S, Baumgart M, Radek A, Herbst M, Siebert D, Brühl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, et al. (2015)
Biotechnology Journal 10(2): 290-301.
PUB | DOI | WoS | PubMed | Europe PMC
 
[180]
2015 | Journal Article | PUB-ID: 2764512
Complete genome sequence of Rhodococcus erythropolis BG43 (DSM 46869), a degrader of Pseudomonas aeruginosa quorum sensing signal molecules
Rückert C, Birmes FS, Müller C, Niewerth H, Winkler A, Fetzner S, Kalinowski J (2015)
Journal of biotechnology 211: 99-100.
PUB | DOI | WoS | PubMed | Europe PMC
 
[179]
2015 | Journal Article | PUB-ID: 2771555
Rhodococcus erythropolis BG43 genes mediating Pseudomonas aeruginosa quinolone signal degradation and virulence factor attenuation
Müller C, Birmes FS, Rückert C, Kalinowski J, Fetzner S (2015)
Applied and Environmental Microbiology 81(22): 7720-7729.
PUB | DOI | WoS | PubMed | Europe PMC
 
[178]
2015 | Journal Article | PUB-ID: 2756434
Sphingopyxis fribergensis sp. nov., a soil bacterium with the ability to degrade styrene and phenylacetic acid
Oelschlägel M, Rückert C, Kalinowski J, Schmidt G, Schlömann M, Tischler D (2015)
International journal of systematic and evolutionary microbiology 65(Part 9): 3008-3015.
PUB | DOI | WoS | PubMed | Europe PMC
 
[177]
2015 | Journal Article | PUB-ID: 2735160
Engineering L-arabinose metabolism in triacylglycerol-producing Rhodococcus opacus for lignocellulosic fuel production
Kurosawa K, Plassmeier J, Kalinowski J, Rückert C, Sinskey AJ (2015)
Metabolic engineering.
PUB | DOI | WoS | PubMed | Europe PMC
 
[176]
2015 | Journal Article | PUB-ID: 2764291
The adpA-like regulatory gene from Actinoplanes teichomyceticus: in silico analysis and heterologous expression
Ostash B, Yushchuk O, Tistechok S, Mutenko H, Horbal L, Muryn A, Dacyuk Y, Kalinowski J, Luzhetskyy A, Fedorenko V (2015)
World Journal of Microbiology and Biotechnology 31(8): 1297-1301.
PUB | DOI | WoS | PubMed | Europe PMC
 
[175]
2015 | Journal Article | PUB-ID: 2758666
The Intraperitoneal Transcriptome of the Opportunistic Pathogen Enterococcus faecalis in Mice
Muller C, Cacaci M, Sauvageot N, Sanguinetti M, Rattei T, Eder T, Giard J-C, Kalinowski J, Hain T, Hartke A (2015)
PLoS ONE 10(5).
PUB | DOI | WoS | PubMed | Europe PMC
 
[174]
2015 | Journal Article | PUB-ID: 2723776
Transcriptional Regulation of the Vanillate Utilization Genes (vanABK Operon) of Corynebacterium glutamicum by VanR, a PadR-Like Repressor
Heravi KM, Lange J, Watzlawick H, Kalinowski J, Altenbuchner J (2015)
Journal of Bacteriology 197(5): 959-972.
PUB | DOI | WoS
 
 
[172]
2014 | Journal Article | PUB-ID: 2662843
Genome rearrangements of Streptomyces albus J1074 lead to the carotenoid gene cluster activation
Myronovskyi M, Tokovenko B, Brötz E, Rückert C, Kalinowski J, Luzhetskyy A (2014)
Applied microbiology and biotechnology 98(2): 795-806.
PUB | DOI | WoS | PubMed | Europe PMC
 
[171]
2014 | Journal Article | PUB-ID: 2693296
Complete Genome Sequence of Corynebacterium casei LMG S-19264T (=DSM 44701T), isolated from a smear-ripened cheese
Walter F, Albersmeier A, Kalinowski J, Rückert C (2014)
Journal of Biotechnology 189: 76-77.
PUB | DOI | WoS | PubMed | Europe PMC
 
[170]
2014 | Journal Article | PUB-ID: 2674387
ReadXplorer - Visualization and Analysis of Mapped Sequences
Hilker R, Stadermann KB, Doppmeier D, Kalinowski J, Stoye J, Straube J, Winnebald J, Goesmann A (2014)
Bioinformatics 30(16): 2247-2254.
PUB | DOI | WoS | PubMed | Europe PMC
 
[169]
2014 | Journal Article | PUB-ID: 2676806
Identifizierung von Promotoren in Corynebacterium glutamicum
Busche T, Pfeifer-Sancar K, Rückert C, Kalinowski J (2014)
BIOspektrum 20(3): 284-287.
PUB | DOI
 
[168]
2014 | Journal Article | PUB-ID: 2710431
Carbon source dependent biosynthesis of acarviose metabolites in Actinoplanes sp SE50/110
Wendler S, Ortseifen V, Persicke M, Klein A, Neshat A, Niehaus K, Schneiker-Bekel S, Walter F, Wehmeier UF, Kalinowski J, Pühler A (2014)
Journal of Biotechnology 191: 113-120.
PUB | DOI | WoS | PubMed | Europe PMC
 
[167]
2014 | Journal Article | PUB-ID: 2665038
Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts
Schwientek P, Neshat A, Kalinowski J, Klein A, Rückert C, Schneiker-Bekel S, Wendler S, Stoye J, Pühler A (2014)
Journal of Biotechnology 190: 85-95.
PUB | DOI | WoS | PubMed | Europe PMC
 
[166]
2014 | Journal Article | PUB-ID: 2682811
Vom Schärfesensor zur mikrobiellen Brennstoffzelle
Lübke N-C, Wolf T, Braun R, Rückert C, Kalinowski J (2014)
BIOspektrum 20(4): 468-469.
PUB | DOI
 
[165]
2014 | Journal Article | PUB-ID: 2645148
Histidine biosynthesis, its regulation and biotechnological application in Corynebacterium glutamicum
Kulis-Horn R, Persicke M, Kalinowski J (2014)
Microbial Biotechnology 7(1): 5-25.
PUB | DOI | WoS | PubMed | Europe PMC
 
[164]
2014 | Journal Article | PUB-ID: 2706029
ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis
Kessler N, Walter F, Persicke M, Albaum S, Kalinowski J, Goesmann A, Niehaus K, Nattkemper TW (2014)
PLoS ONE 9(11): e113909.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[163]
2014 | Journal Article | PUB-ID: 2689746
Complete genome sequence of *Bacillus methanolicus* MGA3, a thermotolerant amino acid producing methylotroph
Irla M, Neshat A, Winkler A, Albersmeier A, Heggeset TM, Brautaset T, Kalinowski J, Wendisch VF, Rückert C (2014)
Journal of Biotechnology 188: 110-111.
PUB | DOI | WoS | PubMed | Europe PMC
 
[162]
2014 | Journal Article | PUB-ID: 2689773
GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers
Jünemann S, Prior K, Albersmeier A, Albaum S, Kalinowski J, Goesmann A, Stoye J, Harmsen D (2014)
PLOS ONE 9(9): e107014.
PUB | DOI | WoS | PubMed | Europe PMC
 
[161]
2014 | Journal Article | PUB-ID: 2664976
Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkämper A, Pühler A, Biener R, Schwartz D, Kalinowski J (2014)
Journal of biotechnology 178: 41-42.
PUB | DOI | WoS | PubMed | Europe PMC
 
[160]
2014 | Journal Article | PUB-ID: 2689749 PUB | DOI | WoS | PubMed | Europe PMC
 
[159]
2014 | Journal Article | PUB-ID: 2676082
Genomics of Sponge-Associated Streptomyces spp. Closely Related to Streptomyces albus J1074: Insights into Marine Adaptation and Secondary Metabolite Biosynthesis Potential
Ian E, Malko DB, Sekurova ON, Bredholt H, Rückert C, Borisova ME, Albersmeier A, Kalinowski J, Gelfand MS, Zotchev SB (2014)
PloS one 9(5): 96719.
PUB | DOI | WoS | PubMed | Europe PMC
 
[158]
2014 | Journal Article | PUB-ID: 2693289
Complete Genome Sequence of Corynebacterium vitaeruminis DSM 20294T, isolated from the cow rumen as a vitamin B producer
Al-Dilaimi A, Albersmeier A, Kalinowski J, Rückert C (2014)
Journal of Biotechnology 189: 70-71.
PUB | DOI | WoS | PubMed | Europe PMC
 
[157]
2014 | Journal Article | PUB-ID: 2693535
Complete Genome Sequence of the Actinobacterium Amycolatopsis japonica MG417-CF17T (=DSM 44213T) producing (S,S)-N,N'-ethylenediaminedisuccinic acid
Stegmann E, Albersmeier A, Spohn M, Gert H, Weber T, Wohlleben W, Kalinowski J, Rückert C (2014)
Journal of biotechnology 189: 46-47.
PUB | DOI | WoS | PubMed | Europe PMC
 
[156]
2014 | Journal Article | PUB-ID: 2647986
Draft Genome Sequence of Streptomyces roseochromogenes subsp. oscitans DS 12.976, Producer of the Aminocoumarin Antibiotic Clorobiocin
Rückert C, Kalinowski J, Heide L, Apel AK (2014)
Genome announcements 2(1): e01147-13.
PUB | DOI | PubMed | Europe PMC
 
[155]
2014 | Journal Article | PUB-ID: 2647992
Draft Genome Sequence of Streptomyces niveus NCIMB 11891, Producer of the Aminocoumarin Antibiotic Novobiocin
Flinspach K, Rückert C, Kalinowski J, Heide L, Apel AK (2014)
Genome announcements 2(1): e01146-13.
PUB | DOI | PubMed | Europe PMC
 
[154]
2014 | Journal Article | PUB-ID: 2653196
An environmental bacterial taxon with a large and distinct metabolic repertoire
Wilson MC, Mori T, Rückert C, Uria AR, Helf MJ, Takada K, Gernert C, Steffens UAE, Heycke N, Schmitt S, Rinke C, et al. (2014)
Nature 506(7486): 58-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[153]
2014 | Journal Article | PUB-ID: 2699107
Complete genome sequence of producer of the glycopeptide antibiotic Aculeximycin Kutzneria albida DSM 43870T, a representative of minor genus of Pseudonocardiaceae
Rebets Y, Tokovenko B, Lushchyk I, Rückert C, Zaburannyi N, Bechthold A, Kalinowski J, Luzhetskyy A (2014)
BMC genomics 15(1): 885.
PUB | DOI | WoS | PubMed | Europe PMC
 
[152]
2014 | Journal Article | PUB-ID: 2707667
A Membrane-Bound Prenyltransferase Catalyzes the O-Prenylation of 1,6-Dihydroxyphenazine in the Marine Bacterium Streptomyces sp CNQ-509
Zeyhle P, Bauer JS, Steimle M, Leipoldt F, Roesch M, Kalinowski J, Gross H, Heide L (2014)
ChemBioChem 15(16): 2385-2392.
PUB | DOI | WoS | PubMed | Europe PMC
 
[151]
2014 | Journal Article | PUB-ID: 2685853
Genome-Based Discovery of a Novel Membrane-Bound 1,6-Dihydroxyphenazine Prenyltransferase from a Marine Actinomycete
Zeyhle P, Bauer JS, Kalinowski J, Shin-ya K, Gross H, Heide L (2014)
PLoS ONE 9(6).
PUB | DOI | WoS | PubMed | Europe PMC
 
[150]
2014 | Journal Article | PUB-ID: 2656728
Protein S-Mycothiolation Functions as Redox-Switch and Thiol Protection Mechanism in Corynebacterium glutamicum Under Hypochlorite Stress
Chi BK, Busche T, Van Laer K, Baesell K, Becher D, Clermont L, Seibold GM, Persicke M, Kalinowski J, Messens J, Antelmann H (2014)
Antioxidants & Redox Signaling 20(4): 589-605.
PUB | DOI | WoS | PubMed | Europe PMC
 
[149]
2013 | Journal Article | PUB-ID: 2614036
Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 - a platform strain for basic research and industrial biotechnology
Baumgart M, Unthan S, Rückert C, Sivalingam J, Grünberger A, Kalinowski J, Bott M, Noack S, Frunzke J (2013)
Applied and environmental microbiology 79(19): 6006-6015.
PUB | DOI | WoS | PubMed | Europe PMC
 
[148]
2013 | Journal Article | PUB-ID: 2643373
Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique
Pfeifer-Sancar K, Mentz A, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 888.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[147]
2013 | Journal Article | PUB-ID: 2631969
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 714.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[146]
2013 | Journal Article | PUB-ID: 2631977
A novel type of N-acetylglutamate synthase is involved in the first step of arginine biosynthesis in Corynebacterium glutamicum
Petri K, Walter F, Persicke M, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 713.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[145]
2013 | Journal Article | PUB-ID: 2614906
The cytosolic and extracellular proteomes of Actinoplanes sp. SE50/110 led to the identification of gene products involved in acarbose metabolism
Wendler S, Hürtgen D, Kalinowski J, Klein A, Niehaus K, Schulte F, Schwientek P, Wehlmann H, Wehmeier UF, Pühler A (2013)
Journal of Biotechnology 167(2): 178-189.
PUB | DOI | WoS | PubMed | Europe PMC
 
[144]
2013 | Journal Article | PUB-ID: 2632946
Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil
Köhler KAK, Rückert C, Schatschneider S, Vorhölter F-J, Szczepanowski R, Blank LM, Niehaus K, Goesmann A, Pühler A, Kalinowski J, Schmid A (2013)
Journal of Biotechnology 168(4): 729-730.
PUB | DOI | WoS | PubMed | Europe PMC
 
[143]
2013 | Journal Article | PUB-ID: 2548236
Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media
Schwientek P, Wendler S, Neshat A, Eirich C, Rückert C, Klein A, Wehmeier UF, Kalinowski J, Stoye J, Pühler A (2013)
Journal of Biotechnology 167(2): 166-177.
PUB | DOI | WoS | PubMed | Europe PMC
 
[142]
2013 | Journal Article | PUB-ID: 2645668
Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production
Bogen C, Al-Dilaimi A, Albersmeier A, Wichmann J, Grundmann M, Rupp O, Lauersen KJ, Blifernez-Klassen O, Kalinowski J, Goesmann A, Mussgnug JH, et al. (2013)
BMC Genomics 14(1): 926.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[141]
2013 | Journal Article | PUB-ID: 2631956
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Iftime D, Musiol EM, Blin K, Wohlleben W, Pühler A, Kalinowski J, Weber T (2013)
Journal of Biotechnology 168(4): 739-740.
PUB | DOI | WoS | PubMed | Europe PMC
 
[140]
2013 | Journal Article | PUB-ID: 2566922
Updating benchtop sequencing performance comparison
Jünemann S, Sedlazeck FJ, Prior K, Albersmeier A, John U, Kalinowski J, Mellmann A, Goesmann A, von Haeseler A, Stoye J, Harmsen D (2013)
Nature Biotechnology 31(4): 294-296.
PUB | DOI | WoS | PubMed | Europe PMC
 
[139]
2013 | Journal Article | PUB-ID: 2641228
Corrigendum: Updating benchtop sequencing performance comparison
Jünemann S, Sedlazeck FJ, Prior K, Albersmeier A, John U, Kalinowski J, Mellmann A, Goesmann A, von Haeseler A, Stoye J, Harmsen D (2013)
Nature biotechnology 31(12): 1148.
PUB | DOI | WoS | PubMed | Europe PMC
 
[138]
2013 | Journal Article | PUB-ID: 2644101
Genome sequence of the marine bacterium Corynebacterium maris type strain Coryn-1T (= DSM 45190T)
Schaffert L, Albersmeier A, Bednarz H, Niehaus K, Kalinowski J, Rückert C (2013)
Standards in Genomic Sciences 8(3): 516-524.
PUB | DOI | WoS | PubMed | Europe PMC
 
[137]
2013 | Journal Article | PUB-ID: 2648007
Genome sequence of the squalene-degrading bacterium Corynebacterium terpenotabidum type strain Y-11T (= DSM 44721T)
Rückert C, Albersmeier A, Al-Dilaimi A, Bednarz H, Niehaus K, Szczepanowski R, Kalinowski J (2013)
Standards in Genomic Sciences 9(3): 505-513.
PUB | DOI | WoS | PubMed | Europe PMC
 
[136]
2013 | Journal Article | PUB-ID: 2555355
A propionate-inducible expression system based on the Corynebacterium glutamicum prpD2 promoter and PrpR activator and its application for the redirection of amino acid biosynthesis pathways
Plassmeier J, Busche T, Molck S, Persicke M, Pühler A, Rückert C, Kalinowski J (2013)
Journal of Biotechnology 163(2): 225-232.
PUB | DOI | WoS | PubMed | Europe PMC
 
[135]
2013 | Journal Article | PUB-ID: 2558460
Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study
Roetzer A, Diel R, Kohl TA, Rückert C, Nübel U, Blom J, Wirth T, Jaenicke S, Schuback S, Rüsch-Gerdes S, Supply P, et al. (2013)
PLoS medicine 10(2): e1001387.
PUB | DOI | WoS | PubMed | Europe PMC
 
[134]
2013 | Journal Article | PUB-ID: 2625606 PUB | DOI | WoS | PubMed | Europe PMC
 
[133]
2013 | Journal Article | PUB-ID: 2555771
Corynebacterium glutamicum promoters: a practical approach
Pátek M, Holátko J, Busche T, Kalinowski J, Nešvera J (2013)
Microbial Biotechnology 6(2): 103-117.
PUB | DOI | WoS | PubMed | Europe PMC
 
[132]
2012 | Journal Article | PUB-ID: 2486060
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A (2012)
BMC Genomics 13(1): 112.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[131]
2012 | Journal Article | PUB-ID: 2405255
MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example
Persicke M, Rückert C, Plassmeier J, Stutz L, Kessler N, Kalinowski J, Goesmann A, Neuweger H (2012)
Metabolomics 8(2): 310-322.
PUB | DOI | WoS
 
[130]
2012 | Journal Article | PUB-ID: 2526269
Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
Strobel T, Al-Dilaimi A, Blom J, Gessner A, Kalinowski J, Luzhetska M, Pühler A, Szczepanowski R, Bechthold A, Rückert C (2012)
BMC Genomics 13(1): 465.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[129]
2012 | Conference Abstract | PUB-ID: 2530508
Chemical surprises from an uncultivated sponge symbiont
Piel J, Freeman MF, Gurgui C, Helf M, Morinaka B, Wilson MC, Mori T, Rückert C, Steffens U, Takada K, Gernert C, et al. (2012)
Planta Medica 78(11): 1040-+.
PUB | WoS
 
[128]
2012 | Journal Article | PUB-ID: 2551038
Genome sequence of the halotolerant bacterium Corynebacterium halotolerans type strain YIM 70093T (= DSM 44683T)
Rückert C, Albersmeier A, Al-Dilaimi A, Niehaus K, Szczepanowski R, Kalinowski J (2012)
Standards in Genomic Sciences 7(2): 284-293.
PUB | DOI | WoS | PubMed | Europe PMC
 
[127]
2012 | Journal Article | PUB-ID: 2530221
The genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin
Jankowitsch F, Schwarz J, Rückert C, Gust B, Szczepanowski R, Blom J, Pelzer S, Kalinowski J, Mack M (2012)
Journal of bacteriology 194(24): 6818-6827.
PUB | DOI | WoS | PubMed | Europe PMC
 
[126]
2012 | Journal Article | PUB-ID: 2486027
Arabitol metabolism of Corynebacterium glutamicum and its regulation by AtlR
Laslo T, von Zaluskowski P, Gabris C, Lodd E, Rückert C, Dangel P, Kalinowski J, Auchter M, Seibold G, Eikmanns BJ (2012)
Journal of bacteriology 194(5): 941-955.
PUB | DOI | WoS | PubMed | Europe PMC
 
[125]
2012 | Journal Article | PUB-ID: 2530872
Draft Genome Sequence of Bacillus anthracis UR-1, Isolated from a German Heroin User
Rückert C, Licht K, Kalinowski J, Espírito Santo C, Antwerpen M, Hanczaruk M, Reischl U, Holzmann T, Gessner A, Tiemann C, Grass G (2012)
Journal of bacteriology 194(21): 5997-5998.
PUB | DOI | WoS | PubMed | Europe PMC
 
[124]
2012 | Journal Article | PUB-ID: 2548248
Draft genome sequence of Bacillus anthracis BF-1, Isolated from Bavarian cattle
Antwerpen M, Proença DN, Rückert C, Licht K, Kalinowski J, Hanczaruk M, Tiemann C, Grass G (2012)
Journal of bacteriology 194(22): 6360-6361.
PUB | DOI | WoS | PubMed | Europe PMC
 
[123]
2012 | Journal Article | PUB-ID: 2520163
Phenylacetic Acid Catabolism and Its Transcriptional Regulation in Corynebacterium glutamicum
Chen X, Kohl TA, Rückert C, Rodionov DA, Li L-H, Ding J-Y, Kalinowski J, Liu S-J (2012)
Applied and environmental microbiology 78(16): 5796-5804.
PUB | DOI | WoS | PubMed | Europe PMC
 
[122]
2012 | Journal Article | PUB-ID: 2528277 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[121]
2012 | Journal Article | PUB-ID: 2560259
The two-component system ChrSA is crucial for haem tolerance and interferes with HrrSA in haem-dependent gene regulation in Corynebacterium glutamicum
Heyer A, Gaetgens C, Hentschel E, Kalinowski J, Bott M, Frunzke J (2012)
Microbiology 158(Pt_12): 3020-3031.
PUB | DOI | WoS | PubMed | Europe PMC
 
[120]
2012 | Journal Article | PUB-ID: 2545867
Identification of Novel Cholesteatoma-related Gene Expression Signatures Using Full-genome Microarrays
Klenke C, Janowski SJ, Borck D, Widera D, Ebmeyer J, Kalinowski J, Leichtle A, Hofestädt R, Upile T, Kaltschmidt C, Kaltschmidt B, et al. (2012)
PLoS One 7(12): e52718.
PUB | DOI | WoS | PubMed | Europe PMC
 
[119]
2012 | Journal Article | PUB-ID: 2501701
rplC T460C Identified as a Dominant Mutation in Linezolid-Resistant Mycobacterium tuberculosis Strains
Beckert P, Hillemann D, Kohl T, Kalinowski J, Richter E, Niemann S, Feuerriegel S (2012)
Antimicrobial Agents and Chemotherapy 56(5): 2743-2745.
PUB | DOI | WoS | PubMed | Europe PMC
 
[118]
2011 | Conference Abstract | PUB-ID: 2289887
Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis
Hinse D, Vollmer T, Rückert C, Blom J, Kalinowski J, Knabbe C, Dreier J (2011)
Clinical Chemistry and Laboratory Medicine 49: S837.
PUB | WoS
 
[117]
2011 | Journal Article | PUB-ID: 2289952
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming
Blom J, Jakobi T, Doppmeier D, Jaenicke S, Kalinowski J, Stoye J, Goesmann A (2011)
Bioinformatics 27(10): 1351-1358.
PUB | DOI | WoS | PubMed | Europe PMC
 
[116]
2011 | Journal Article | PUB-ID: 1896635
RamA and RamB are global transcriptional regulators in Corynebacterium glutamicum and control genes for enzymes of the central metabolism
Auchter M, Cramer A, Hüser A, Rückert C, Emer D, Schwarz P, Arndt A, Lange C, Kalinowski J, Wendisch VF, Eikmanns BJ (2011)
J Biotechnol 154(2-3): 126-139.
PUB | DOI | WoS | PubMed | Europe PMC
 
[115]
2011 | Journal Article | PUB-ID: 2404808
Molecular characterization of PrpR, the transcriptional activator of propionate catabolism in Corynebacterium glutamicum
Plassmeier J, Persicke M, Pühler A, Sterthoff C, Rückert C, Kalinowski J (2011)
Journal of Biotechnology 159(1-2): 1-11.
PUB | DOI | WoS | PubMed | Europe PMC
 
[114]
2011 | Journal Article | PUB-ID: 2289494
Size exclusion chromatography-An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites
Persicke M, Plassmeier J, Neuweger H, Rückert C, Pühler A, Kalinowski J (2011)
Journal of Biotechnology 154(2-3): 171-178.
PUB | DOI | WoS | PubMed | Europe PMC
 
[113]
2011 | Journal Article | PUB-ID: 2394493
Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis
Hinse D, Vollmer T, Rückert C, Blom J, Kalinowski J, Knabbe C, Dreier J (2011)
BMC Genomics 12(1): 400.
PUB | DOI | WoS | PubMed | Europe PMC
 
[112]
2011 | Journal Article | PUB-ID: 2440558
A Novel N,N-8-Amino-8-demethyl-D-riboflavin Dimethyltransferase (RosA) Catalyzing the Two Terminal Steps of Roseoflavin Biosynthesis in Streptomyces davawensis
Jankowitsch F, Kuehm C, Kellner R, Kalinowski J, Pelzer S, Macheroux P, Mack M (2011)
Journal of Biological Chemistry 286(44): 38275-38285.
PUB | DOI | WoS | PubMed | Europe PMC
 
[111]
2011 | Journal Article | PUB-ID: 2289491
Regulatory and Metabolic Networks for Amino Acid Production by Corynebacterium glutamicum
Kalinowski J (2011)
Journal of Biotechnology 154(2-3): 99-100.
PUB | DOI | WoS | PubMed | Europe PMC
 
[110]
2011 | Journal Article | PUB-ID: 2093546
Control of adhA and sucR expression by the SucR regulator in Corynebacterium glutamicum
Auchter M, Laslo T, Fleischer C, Schiller L, Arndt A, Gaigalat L, Kalinowski J, Eikmanns BJ (2011)
Journal of Biotechnology 152(3): 77-86.
PUB | DOI | WoS | PubMed | Europe PMC
 
[109]
2010 | Journal Article | PUB-ID: 2486400
Advanced Genomics and Transcriptomics of Industrial Microorganisms
Kalinowski J, Rückert C, Szczepanowski R, Pühler A (2010)
Chemie Ingenieur Technik 82(9): 1518-1519.
PUB | DOI
 
[108]
2010 | Journal Article | PUB-ID: 1796753
Adaptation of Corynebacterium glutamicum to salt-stress conditions
Fraenzel B, Troetschel C, Rückert C, Kalinowski J, Poetsch A, Wolters DA (2010)
PROTEOMICS 10(3): 445-457.
PUB | DOI | WoS | PubMed | Europe PMC
 
[107]
2010 | Journal Article | PUB-ID: 1968272
Quantitative proteomic overview on the Corynebacterium glutamicum L-lysine producing strain DM1730
Fraenzel B, Poetsch A, Troetschel C, Persicke M, Kalinowski J, Wolters DA (2010)
Journal of Proteomics 73(12): 2336-2353.
PUB | DOI | WoS | PubMed | Europe PMC
 
[106]
2010 | Journal Article | PUB-ID: 1795939 PUB | DOI | WoS | PubMed | Europe PMC
 
[105]
2009 | Journal Article | PUB-ID: 1783813
Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example
Neuweger H, Persicke M, Albaum S, Bekel T, Dondrup M, Hüser AT, Winnebald J, Schneider J, Kalinowski J, Goesmann A (2009)
BMC Systems Biology 3(1): 82.
PUB | PDF | DOI | PubMed | Europe PMC
 
[104]
2009 | Journal Article | PUB-ID: 1588891
Functional genomics of pH homeostasis in Corynebacterium glutamicum revealed novel links between pH response, oxidative stress, iron homeostasis and methionine synthesis
Follmann M, Ochrombel I, Kraemer R, Troetschel C, Poetsch A, Rückert C, Hueser A, Persicke M, Seiferling D, Kalinowski J, Marin K (2009)
BMC Genomics 10(1): 621.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[103]
2009 | Journal Article | PUB-ID: 1635951
Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032
Nentwich SS, Brinkrolf K, Gaigalat L, Hueser AT, Rey DA, Mohrbach T, Marin K, Pühler A, Tauch A, Kalinowski J (2009)
MICROBIOLOGY 155(1): 150-164.
PUB | DOI | WoS | PubMed | Europe PMC
 
[102]
2009 | Journal Article | PUB-ID: 1589531
Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments
Albaum S, Neuweger H, Fraenzel B, Lange S, Mertens D, Troetschel C, Wolters D, Kalinowski J, Nattkemper TW, Goesmann A (2009)
Bioinformatics 25(23): 3128-3134.
PUB | DOI | WoS | PubMed | Europe PMC
 
[101]
2009 | Journal Article | PUB-ID: 1591178
From Corynebacterium glutamicum to Mycobacterium tuberculosis-towards transfers of gene regulatory networks and integrated data analyses with MycoRegNet
Krawczyk J, Kohl TA, Goesmann A, Kalinowski J, Baumbach J (2009)
NUCLEIC ACIDS RESEARCH 37(14): e97.
PUB | DOI | WoS | PubMed | Europe PMC
 
[100]
2009 | Journal Article | PUB-ID: 1635517
Microarray studies reveal a 'differential response' to moderate or severe heat shock of the HrcA- and HspR-dependent systems in Corynebacterium glutamicum
Barreiro C, Nakunst D, Hueser AT, de Paz HD, Kalinowski J, Martin JF (2009)
MICROBIOLOGY-SGM 155(2): 359-372.
PUB | DOI | WoS | PubMed | Europe PMC
 
[99]
2008 | Conference Abstract | PUB-ID: 1587496
Looking for non-coding RNAs in Corynebacterium glutamicum
Gkogkoglou K, Mentz A, Albersmeier A, Kalinowski J, Giegerich R (2008)
FEBS JOURNAL 275(Suppl. 1): 153.
PUB | WoS
 
[98]
2008 | Journal Article | PUB-ID: 1585918
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker-Bekel S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Goetker S, et al. (2008)
Journal of Biotechnology 136(1-2): 11-21.
PUB | DOI | WoS | PubMed | Europe PMC
 
[97]
2008 | Journal Article | PUB-ID: 1592345
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity
Gartemann K-H, Abt B, Bekel T, Burger A, Engemann J, Fluegel M, Gaigalat L, Goesmann A, Graefen I, Kalinowski J, Kaup O, et al. (2008)
JOURNAL OF BACTERIOLOGY 190(6): 2138-2149.
PUB | DOI | WoS | PubMed | Europe PMC
 
[96]
2008 | Journal Article | PUB-ID: 1585560 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[95]
2008 | Book Chapter | PUB-ID: 2397428
Sulfur Metabolism in Corynebacterium glutamicum
Rückert C, Kalinowski J (2008)
In: Corynebacteria: Genomics and Molecular Biology. Burkovski A (Ed); Norfolk, UK: Caister Academic Press: 217-240.
PUB
 
[94]
2008 | Journal Article | PUB-ID: 1588078
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences
Brinkrolf K, Ploeger S, Solle S, Brune I, Nentwich SS, Hueser AT, Kalinowski J, Pühler A, Tauch A (2008)
MICROBIOLOGY 154(4): 1068-1081.
PUB | DOI | WoS | PubMed | Europe PMC
 
[93]
2008 | Conference Paper | PUB-ID: 2018381
ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract)
Albaum S, Neuweger H, Lange S, Mertens D, Runte K, Kalinowski J, Nattkemper TW, Goesmann A (2008)
In: HUPO 7th Annual World Congress.
PUB
 
[92]
2007 | Journal Article | PUB-ID: 1631327
Complete genome sequence of the myxobacterium Sorangium cellulosum
Schneiker-Bekel S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer MO, Bartels D, Bekel T, Beyer S, Bode E, Bode HB, et al. (2007)
Nature Biotechnology 25(11): 1281-1289.
PUB | DOI | WoS | PubMed | Europe PMC
 
[91]
2007 | Journal Article | PUB-ID: 1594426
A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411
Hansmeier N, Chao T-C, Daschkey S, Muesken M, Kalinowski J, Pühler A, Tauch A (2007)
PROTEOMICS 7(7): 1076-1096.
PUB | DOI | WoS | PubMed | Europe PMC
 
[90]
2007 | Journal Article | PUB-ID: 1593371
The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes
Nakunst D, Larisch C, Hueser AT, Tauch A, Pühler A, Kalinowski J (2007)
JOURNAL OF BACTERIOLOGY 189(13): 4696-4707.
PUB | DOI | WoS | PubMed | Europe PMC
 
[89]
2007 | Journal Article | PUB-ID: 1596102 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[88]
2007 | Journal Article | PUB-ID: 1593292 PUB | DOI | WoS | PubMed | Europe PMC
 
[87]
2007 | Journal Article | PUB-ID: 1594087
The Ic1R-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum
Brune I, Jochmann N, Brinkrolf K, Hueser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Pühler A, Tauch A (2007)
JOURNAL OF BACTERIOLOGY 189(7): 2720-2733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[86]
2007 | Journal Article | PUB-ID: 1783754
CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data
Neuweger H, Baumbach J, Albaum S, Bekel T, Dondrup M, Hüser AT, Kalinowski J, Oehm S, Pühler A, Rahmann S, Weile J, et al. (2007)
BMC Systems Biology 1(1): 55.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[85]
2007 | Journal Article | PUB-ID: 1783727
The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in Corynebacterium glutamicum
Gaigalat L, Schlüter J-P, Hartmann M, Mormann S, Tauch A, Pühler A, Kalinowski J (2007)
BMC Molecular Biology 8(1): 104.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[84]
2007 | Journal Article | PUB-ID: 1632884
FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum
Haenssler E, Mueller T, Jessberger N, Voelzke A, Plassmeier J, Kalinowski J, Kraemer R, Burkovski A (2007)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 76(3): 625-632.
PUB | DOI | WoS | PubMed | Europe PMC
 
[83]
2007 | Journal Article | PUB-ID: 1596355
Nitrogen metabolism and nitrogen control in corynebacteria: Variations of a common theme
Walter B, Haenssler E, Kalinowski J, Burkovski A (2007)
JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY 12(1-2): 131-138.
PUB | DOI | WoS | PubMed | Europe PMC
 
[82]
2006 | Journal Article | PUB-ID: 1598225
Morphological changes and proteome response of Corynebacterium glutamicum to a partial depletion of Ftsl
Valbuena N, Letek M, Ramos A, Ayala J, Nakunst D, Kalinowski J, Mateos LM, Gil JA (2006)
MICROBIOLOGY-SGM 152(8): 2491-2503.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[80]
2006 | Journal Article | PUB-ID: 1599402
Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae
Hansmeier N, Chao TC, Kalinowski J, Pühler A, Tauch A (2006)
PROTEOMICS 6(8): 2465-2476.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[78]
2006 | Journal Article | PUB-ID: 1773628 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[77]
2006 | Journal Article | PUB-ID: 1773853 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[76]
2006 | Journal Article | PUB-ID: 1599618
The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032
Hansmeier N, Albersmeier A, Tauch A, Damberg T, Ros R, Anselmetti D, Pühler A, Kalinowski J (2006)
Microbiology 152(4): 923-935.
PUB | DOI | WoS | PubMed | Europe PMC
 
[75]
2006 | Journal Article | PUB-ID: 2405187
The Gene ncgl2918 Encodes a Novel Maleylpyruvate Isomerase That Needs Mycothiol as Cofactor and Links Mycothiol Biosynthesis and Gentisate Assimilation in Corynebacterium glutamicum
Feng J, Che Y, Milse J, Yin Y-J, Liu L, Rückert C, Shen X-H, Qi S-W, Kalinowski J, Liu S-J (2006)
Journal of Biological Chemistry 281(16): 10778-10785.
PUB | DOI | WoS | PubMed | Europe PMC
 
[74]
2006 | Journal Article | PUB-ID: 1895365
Emerging Corynebacterium glutamicum systems biology
Wendisch VF, Bott M, Kalinowski J, Oldiges M, Wiechert W (2006)
Journal of Biotechnology 124(1): 74-92.
PUB | DOI | WoS | PubMed | Europe PMC
 
[73]
2006 | Journal Article | PUB-ID: 1597814 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[72]
2006 | Journal Article | PUB-ID: 1946381 PUB | DOI | WoS | PubMed | Europe PMC
 
[71]
2006 | Journal Article | PUB-ID: 1599645
The gene ncgl2918 encodes a novel maleylpyruvate isomerase that needs mycothiol as cofactor and links mycothiol biosynthesis and gentisate assimilation in Corynebacterium glutamicum
Feng J, Che YS, Milse J, Yin YJ, Liu L, Ruckert C, Shen XH, Qi SW, Kalinowski J, Liu SJ (2006)
JOURNAL OF BIOLOGICAL CHEMISTRY 281(16): 10778-10785.
PUB | DOI | WoS | PubMed | Europe PMC
 
[70]
2006 | Journal Article | PUB-ID: 1598610
Utilization of soluble starch by a recombinant Corynebacterium glutamicum strain: Growth and lysine production
Seibold G, Auchter M, Berens S, Kalinowski J, Eikmanns BJ (2006)
JOURNAL OF BIOTECHNOLOGY 124(2): 381-391.
PUB | DOI | WoS | PubMed | Europe PMC
 
[69]
2005 | Book Chapter | PUB-ID: 2906740
The Transparent Cell
Heinz D, Bott M, Kalinowski J, Niefind K, Rakors R, Wendisch VF (2005)
In: BIOTECHNOLOGY 2020 – From the Transparent Cell to the Custom-designed Process. European Commision: 8-15.
PUB
 
[68]
2005 | Journal Article | PUB-ID: 1601955
DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum
Silberbach M, Hüser AT, Kalinowski J, Pühler A, Walter B, Kramer R, Burkovski A (2005)
JOURNAL OF BIOTECHNOLOGY 119(4): 357-367.
PUB | DOI | WoS | PubMed | Europe PMC
 
[67]
2005 | Journal Article | PUB-ID: 1603889
Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques
Silberbach M, Schafer M, Hüser AT, Kalinowski J, Pühler A, Kramer R, Burkovski A (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(5): 2391-2402.
PUB | DOI | WoS | PubMed | Europe PMC
 
[66]
2005 | Journal Article | PUB-ID: 1603458
Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling
Hüser AT, Chassagnole C, Lindley ND, Merkamm M, Guyonvarch A, Elisakova V, Patek M, Kalinowski J, Brune I, Pühler A, Tauch A (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(6): 3255-3268.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[64]
2005 | Journal Article | PUB-ID: 1601771
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction
Rückert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Pühler A, Kalinowski J (2005)
BMC Genomics 6(1): 121.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
[63]
2005 | Journal Article | PUB-ID: 1603821 PUB | DOI | WoS | PubMed | Europe PMC
 
[62]
2005 | Journal Article | PUB-ID: 1602137
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate
Koch DJ, Rückert C, Albersmeier A, Hüser AT, Tauch A, Pühler A, Kalinowski J (2005)
Mol Microbiol 58(2): 480-494.
PUB | DOI | WoS | PubMed | Europe PMC
 
[61]
2005 | Journal Article | PUB-ID: 1603317
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, et al. (2005)
Journal of Bacteriology 187(13): 4671-4682.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[60]
2005 | Journal Article | PUB-ID: 1602017
Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources
Koch DJ, Rückert C, Rey DA, Mix A, Pühler A, Kalinowski J (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(10): 6104-6114.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[59]
2005 | Journal Article | PUB-ID: 1602146
Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon
Beckers G, Strosser J, Hildebrandt U, Kalinowski J, Farwick M, Kramer R, Burkovski A (2005)
MOLECULAR MICROBIOLOGY 58(2): 580-595.
PUB | DOI | WoS | PubMed | Europe PMC
 
[58]
2004 | Book Chapter | PUB-ID: 2906741
Die gläserne Zelle
Heinz D, Bott M, Kalinowski J, Niefind K, Takors R, Wendisch VF (2004)
In: BIOTECHNOLOGIE 2020 - Von der gläsernen Zelle zum maßgeschneiderten Prozess. DECHEMA: 6-13.
PUB
 
[57]
2004 | Journal Article | PUB-ID: 1608839 PUB | DOI | WoS | PubMed | Europe PMC
 
[56]
2004 | Journal Article | PUB-ID: 1606270
The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum
Hartmann M, Barsch A, Niehaus K, Pühler A, Tauch A, Kalinowski J (2004)
ARCHIVES OF MICROBIOLOGY 182(4): 299-312.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[54]
2004 | Journal Article | PUB-ID: 1608687
Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula
Küster H, Hohnjec N, Krajinski F, El Yahyaoui F, Manthey K, Gouzy J, Dondrup M, Meyer F, Kalinowski J, Brechenmacher L, van Tuinen D, et al. (2004)
JOURNAL OF BIOTECHNOLOGY 108(2): 95-113.
PUB | DOI | WoS | PubMed | Europe PMC
 
[53]
2004 | Journal Article | PUB-ID: 1773130
Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy
Hansmeier N, Bartels FW, Ros R, Anselmetti D, Tauch A, Pühler A, Kalinowski J (2004)
J Biotechnol 112(1-2): 177-193.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
[52]
2003 | Journal Article | PUB-ID: 1610260
Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum
Hartmann M, Tauch A, Eggeling L, Bathe B, Mockel B, Pühler A, Kalinowski J (2003)
J Biotechnol 104(1-3): 199-211.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[51]
2003 | Journal Article | PUB-ID: 1609339
Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source
Hüser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Pühler A, Wiegräbe I, Tauch A (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 269-286.
PUB | DOI | WoS | PubMed | Europe PMC
 
[50]
2003 | Journal Article | PUB-ID: 1609260
EMMA: a platform for consistent storage and efficient analysis of microarray data
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Pühler A, Meyer F (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[48]
2003 | Journal Article | PUB-ID: 1610254
Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics
Tauch A, Pühler A, Kalinowski J, Thierbach G (2003)
JOURNAL OF BIOTECHNOLOGY 104(1-3): 27-40.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[47]
2003 | Journal Article | PUB-ID: 1773880
GenDB - an open source genome annotation system for prokaryote genomes
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Pühler A (2003)
Nucleic Acids Research 31(8): 2187-2195.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[46]
2003 | Journal Article | PUB-ID: 1610269 PUB | DOI | WoS | PubMed | Europe PMC
 
[45]
2003 | Journal Article | PUB-ID: 1610274
Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum
McHardy AC, Tauch A, Rückert C, Pühler A, Kalinowski J (2003)
J Biotechnol 104(1-3): 229-240.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[44]
2003 | Journal Article | PUB-ID: 1895035
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, et al. (2003)
Journal of Biotechnology 104(1-3): 5-25.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[42]
2003 | Journal Article | PUB-ID: 1609350
Qualitative and quantitative proteomics by two-dimensional gel electrophoresis, peptide mass fingerprint and a chemically-coded affinity tag (CCAT)
Watt SA, Patschkowski T, Kalinowski J, Niehaus K (2003)
Journal of Biotechnology 106(2-3): 287-300.
PUB | DOI | WoS | PubMed | Europe PMC
 
[41]
2003 | Journal Article | PUB-ID: 1612397 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[40]
2003 | Journal Article | PUB-ID: 1612500
An interferon-gamma-binding protein of novel structure encoded by the fowlpox virus
Puehler F, Schwarz H, Waidner B, Kalinowski J, Kaspers B, Bereswill S, Staeheli P (2003)
JOURNAL OF BIOLOGICAL CHEMISTRY 278(9): 6905-6911.
PUB | DOI | WoS | PubMed | Europe PMC
 
[39]
2002 | Journal Article | PUB-ID: 1614539 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[37]
2002 | Journal Article | PUB-ID: 1615366
PathFinder: reconstruction and dynamic visualization of metabolic pathways
Goesmann A, Haubrock M, Meyer F, Kalinowski J, Giegerich R (2002)
BIOINFORMATICS 18(1): 124-129.
PUB | DOI | WoS | PubMed | Europe PMC
 
[36]
2002 | Journal Article | PUB-ID: 1613598
Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1
Tauch A, Kirchner O, Löffler B, Götker S, Pühler A, Kalinowski J (2002)
CURRENT MICROBIOLOGY 45(5): 362-367.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[35]
2002 | Journal Article | PUB-ID: 1613526
The alanine racemase gene alr is an alternative to antibiotic resistance genes in cloning systems for industrial Corynebacterium glutamicum strains
Tauch A, Götker S, Pühler A, Kalinowski J, Thierbach G (2002)
JOURNAL OF BIOTECHNOLOGY 99(1): 79-91.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[34]
2001 | Journal Article | PUB-ID: 1616804
Relaxed rrn expression and amino acid requirement of a Corynebacterium glutamicum rel mutant defective in (p)ppGpp metabolism
Tauch A, Wehmeier L, Gotker S, Pühler A, Kalinowski J (2001)
FEMS Microbiol Lett 201(1): 53-58.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[33]
2001 | Journal Article | PUB-ID: 1617736
A Corynebacterium glutamicum mutant with a defined deletion within the rpIK gene is impaired in (p)ppGpp accumulation upon amino acid starvation
Wehmeier L, Brockmann-Gretza O, Pisabarro A, Tauch A, Pühler A, Martin JF, Kalinowski J (2001)
Microbiology 147: 691-700.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[32]
2001 | Journal Article | PUB-ID: 1616981
Proteome analysis of Corynebacterium glutamicum
Hermann T, Pfefferle W, Baumann C, Busker E, Schaffer S, Bott M, Sahm H, Dusch N, Kalinowski J, Pühler A, Bendt AK, et al. (2001)
ELECTROPHORESIS 22(9): 1712-1723.
PUB | DOI | WoS | PubMed | Europe PMC
 
[31]
2000 | Journal Article | PUB-ID: 1618501 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[29]
1999 | Journal Article | PUB-ID: 1621156 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[28]
1999 | Journal Article | PUB-ID: 1623329 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[27]
1999 | Journal Article | PUB-ID: 1623284 PUB | WoS | PubMed | Europe PMC | GenBank
 
[26]
1999 | Journal Article | PUB-ID: 1621449
Pantothenate production in Escherichia coli K12 by enhanced expression of the panE gene encoding ketopantoate reductase
Elischewski F, Pühler A, Kalinowski J (1999)
JOURNAL OF BIOTECHNOLOGY 75(2-3): 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
[25]
1998 | Journal Article | PUB-ID: 1624721 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[24]
1998 | Journal Article | PUB-ID: 1625135
The role of the Corynebacterium glutamicum rel gene in (p)ppGpp metabolism
Wehmeier L, Schafer A, Burkovski A, Kramer R, Mechold U, Malke H, Pühler A, Kalinowski J (1998)
Microbiology 144(7): 1853-1862.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[23]
1998 | Journal Article | PUB-ID: 1626331
Versatile low-copy-number plasmids for temperature-inducible overexpression of bacterial genes in Escherichia coli
Götting C, Thierbach G, Pühler A, Kalinowski J (1998)
BIOTECHNIQUES 24(3): 362-+.
PUB | WoS | PubMed | Europe PMC
 
[22]
1998 | Journal Article | PUB-ID: 1904807
Pyruvate carboxylase from Corynebacterium glutamicum: characterization, expression and inactivation of the pyc gene.
Peters-Wendisch P, Kreutzer C, Kalinowski J, Pátek M, Sahm H, Eikmanns BJ (1998)
Microbiology-Sgm 144(4): 915-927.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[21]
1998 | Journal Article | PUB-ID: 1625704
Isoleucine uptake in Corynebacterium glutamicum ATCC 13032 is directed by the brnQ gene product
Tauch A, Hermann T, Burkovski A, Kramer R, Pühler A, Kalinowski J (1998)
ARCHIVES OF MICROBIOLOGY 169(4): 303-312.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[20]
1997 | Journal Article | PUB-ID: 1626635 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[19]
1997 | Journal Article | PUB-ID: 1637471
A Corynebacterium glutamicum gene conferring multidrug resistance in the heterologous host Escherichia coli
Jäger W, Kalinowski J, Pühler A (1997)
J Bacteriol 179(7): 2449-2451.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[18]
1996 | Journal Article | PUB-ID: 1638621
A Corynebacterium glutamicum gene encoding a two-domain protein similar to biotin carboxylases and biotin-carboxyl-carrier proteins
Jäger W, Peters-Wendisch P, Kalinowski J, Pühler A (1996)
Arch Microbiol 166(2): 76-82.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[17]
1996 | Journal Article | PUB-ID: 1637976
Construction of L-lysine-overproducing strains of Brevibacterium lactofermentum by targeted disruption of the hom and thrB genes
Fernandez-Gonzalez C, Gil JA, Mateos LM, Schwarzer A, Schafer A, Kalinowski J, Pühler A, Martin JF (1996)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 46(5-6): 554-558.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
1996 | Journal Article | PUB-ID: 1638415
Integration of narrow-host-range vectors from Escherichia coli into the genomes of amino acid-producing corynebacteria after intergeneric conjugation
Mateos LM, Schäfer A, Kalinowski J, Martin JF, Pühler A (1996)
JOURNAL OF BACTERIOLOGY 178(19): 5768-5775.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
1996 | Journal Article | PUB-ID: 1638387
A physical and genetic map of the Corynebacterium glutamicum ATCC 13032 chromosome
Bathe B, Kalinowski J, Pühler A (1996)
MOLECULAR & GENERAL GENETICS 252(3): 255-265.
PUB | WoS | PubMed | Europe PMC
 
[14]
1995 | Journal Article | PUB-ID: 1639972 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[12]
1995 | Journal Article | PUB-ID: 1641658 PUB | WoS | PubMed | Europe PMC
 
[11]
1994 | Journal Article | PUB-ID: 1643046 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[9]
1994 | Journal Article | PUB-ID: 1642272
Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli
Tauch A, Kirchner O, Wehmeier L, Kalinowski J, Pühler A (1994)
FEMS MICROBIOLOGY LETTERS 123(3): 343-347.
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
1994 | Journal Article | PUB-ID: 1644393
Increased fertility of Corynebacterium glutamicum recipients in intergeneric matings with Escherichia coli after stress exposure
Schäfer A, Kalinowski J, Pühler A (1994)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 60(2): 756-759.
PUB | WoS | PubMed | Europe PMC
 
[7]
1991 | Journal Article | PUB-ID: 1649702
A functionally split pathway for lysine synthesis in Corynebacterium glutamicium
Schrumpf B, Schwarzer A, Kalinowski J, Pühler A, Eggeling L, Sahm H (1991)
Journal of Bacteriology 173(14): 4510-4516.
PUB | WoS | PubMed | Europe PMC
 
[6]
1991 | Journal Article | PUB-ID: 1648831
Molecular analysis of the Corynebacterium glutamicum lysl gene involved in lysine uptake
Seep-Feldhaus AH, Kalinowski J, Pühler A (1991)
MOLECULAR MICROBIOLOGY 5(12): 2995-3005.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
1991 | Journal Article | PUB-ID: 1649978
Genetic and biochemical analysis of the aspartokinase from Corynebacterium glutamicum
Kalinowski J, Cremer J, Bachmann B, Eggeling L, Sahm H, Pühler A (1991)
MOLECULAR MICROBIOLOGY 5(5): 1197-1204.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[4]
1990 | Journal Article | PUB-ID: 1652001
Cloning of a DNA fragment from Corynebacterium glutamicum conferring aminoethyl cysteine resistance and feedback resistance to aspartokinase.
Thierbach G, Kalinowski J, Bachmann B, Pühler A (1990)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 32(4): 443-448.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
1990 | Journal Article | PUB-ID: 1651883
High-frequency conjugal plasmid transfer from gram-negative Escherichia coli to various gram-positive coryneform bacteria.
Schäfer A, Kalinowski J, Simon R, Seep-Feldhaus AH, Pühler A (1990)
JOURNAL OF BACTERIOLOGY 172(3): 1663-1666.
PUB | DOI | WoS | PubMed | Europe PMC
 
[2]
1990 | Journal Article | PUB-ID: 1629917 PUB | WoS | PubMed | Europe PMC | GenBank
 
[1]
1989 | Journal Article | PUB-ID: 1652907 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 

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[242]
2017 | Journal Article | PUB-ID: 2914537
Isolation and whole genome analysis of endospore-forming bacteria from heroin.
Kalinowski J, Ahrens B, Al-Dilaimi A, Winkler A, Wibberg D, Schleenbecker U, Rückert C, Wölfel R, Grass G (2017)
Forensic Sci Int Genet 32: 1-6.
PUB | DOI | PubMed | Europe PMC
 
[241]
2017 | Journal Article | PUB-ID: 2913386 PUB | PDF | DOI
 
[240]
2017 | Journal Article | PUB-ID: 2913401
Streptomyces phaeopurpureus Shinobu 1957 (Approved Lists 1980) and Streptomyces griseorubiginosus (Ryabova and Preobrazhenskaya 1957) Pridham et al. 1958 (Approved Lists 1980) are heterotypic subjective synonyms
Kämpfer P, Rückert C, Blom J, Goesmann A, Wink J, Kalinowski J, Glaeser SP (2017)
International Journal of Systematic and Evolutionary Microbiology.
PUB | DOI | WoS | PubMed | Europe PMC
 
[239]
2017 | Journal Article | PUB-ID: 2913406
Genome-wide determination of transcription start sites reveals new insights into promoter structures in the actinomycete Corynebacterium glutamicum.
Albersmeier A, Pfeifer-Sancar K, Rückert C, Kalinowski J (2017)
Journal of Biotechnology 257: 99-109.
PUB | DOI | WoS | PubMed | Europe PMC
 
[238]
2017 | Journal Article | PUB-ID: 2913403
Linking secondary metabolites to biosynthesis genes in the fungal endophyte Cyanodermella asteris: The anti-cancer bisanthraquinone skyrin.
Jahn L, Schafhauser T, Wibberg D, Rückert C, Winkler A, Kulik A, Weber T, Flor L, van Pée K-H, Kalinowski J, Ludwig-Müller J, et al. (2017)
Journal of Biotechnology 257: 233-239.
PUB | DOI | WoS | PubMed | Europe PMC
 
[237]
2017 | Journal Article | PUB-ID: 2913963
Identification and Functional Characterization of Small Alarmone Synthetases in Corynebacterium glutamicum
Ruwe M, Kalinowski J, Persicke M (2017)
Frontiers in Microbiology 8: 1601.
PUB | PDF | DOI
 
[236]
2017 | Journal Article | PUB-ID: 2913400
Actinoalloteichus fjordicus sp. nov. isolated from marine sponges: phenotypic, chemotaxonomic and genomic characterisation.
Nouioui I, Rückert C, Willemse J, van Wezel GP, Klenk H-P, Busche T, Kalinowski J, Bredholt H, Zotchev SB (2017)
Antonie Van Leeuwenhoek. Journal of Microbiology.
PUB | DOI | PubMed | Europe PMC
 
[235]
2017 | Journal Article | PUB-ID: 2913404
Complete Genome Sequence of the Streptococcus gallolyticus subsp. gallolyticus Strain DSM 16831
Grimm I, Dumke J, Vollmer T, Hinse D, Rückert C, Kalinowski J, Knabbe C, Dreier J (2017)
Genome Announcements 5(16).
PUB | DOI | PubMed | Europe PMC
 
[234]
2017 | Journal Article | PUB-ID: 2913367
Corynebacterium glutamicum chassis C1*: Building and testing a novel platform host for synthetic biology and industrial biotechnology
Baumgart M, Unthan S, Kloss R, Radek A, Polen T, Tenhaef N, Müller MF, Küberl A, Siebert D, Brühl N, Marin K, et al. (2017)
ACS Synthetic Biology.
PUB | DOI | PubMed | Europe PMC
 
[233]
2017 | Journal Article | PUB-ID: 2913038
Highly efficient methane generation from untreated microalgae biomass
Klassen V, Blifernez-Klassen O, Wibberg D, Winkler A, Kalinowski J, Posten C, Kruse O (2017)
Biotechnology for Biofuels 10(1): 186.
PUB | PDF | DOI
 
[232]
2017 | Journal Article | PUB-ID: 2913116
The MalR type regulator AcrC is a transcriptional repressor of acarbose biosynthetic genes in Actinoplanes sp. SE50/110
Wolf T, Droste J, Gren T, Ortseifen V, Schneiker-Bekel S, Zemke T, Pühler A, Kalinowski J (2017)
BMC Genomics 18: 62.
PUB | PDF | DOI
 
[231]
2017 | Journal Article | PUB-ID: 2912419
Physiological roles of sigma factor SigD in Corynebacterium glutamicum
Taniguchi H, Busche T, Patschkowski T, Niehaus K, Patek M, Kalinowski J, Wendisch VF (2017)
BMC Microbiology 17: 158.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[230]
2017 | Journal Article | PUB-ID: 2913110 PUB | PDF | DOI
 
[229]
2017 | Journal Article | PUB-ID: 2912973
Oxidative Stickland reactions in an obligate aerobic organism - amino acid catabolism in the Crenarchaeon Sulfolobus solfataricus
Stark H, Wolf J, Albersmeier A, Pham TK, Hofmann JD, Siebers B, Kalinowski J, Wright PC, Neumann-Schaal M, Schomburg D (2017)
FEBS JOURNAL 284(13): 2078-2095.
PUB | DOI | WoS
 
[228]
2017 | Journal Article | PUB-ID: 2912983
Novel Chromosome Organization Pattern in Actinomycetales-Overlapping Replication Cycles Combined with Diploidy
Boehm K, Meyer F, Rhomberg A, Kalinowski J, Donovan C, Bramkamp M (2017)
MBIO 8(3): e00511-17.
PUB | DOI | WoS
 
[227]
2017 | Journal Article | PUB-ID: 2912103
Complete Draft Genome Sequence of the Actinobacterium Nocardiopsis sinuspersici UTMC102 (DSM 45277T), Which Produces Serine Protease.
Tokovenko B, Rückert C, Kalinowski J, Mohammadipanah F, Wink J, Rosenkränzer B, Myronovskyi M, Luzhetskyy A (2017)
Genome Announc 5(20).
PUB | DOI | PubMed | Europe PMC
 
[226]
2017 | Journal Article | PUB-ID: 2911994
Biosynthesis of the beta-Lactone Proteasome Inhibitors Belactosin and Cystargolide
Wolf F, Bauer JS, Bendel TM, Kulik A, Kalinowski J, Gross H, Kaysser L (2017)
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 56(23): 6665-6668.
PUB | DOI | WoS | PubMed | Europe PMC
 
[225]
2017 | Journal Article | PUB-ID: 2909070
New natural products identified by combined genomics-metabolomics profiling of marine Streptomyces sp MP131-18
Paulus C, Rebets Y, Tokovenko B, Nadmid S, Terekhova LP, Myronovskyi M, Zotchev SB, Rückert C, Braig S, Zahler S, Kalinowski J, et al. (2017)
SCIENTIFIC REPORTS 7: 42382.
PUB | DOI | WoS | PubMed | Europe PMC
 
[224]
2017 | Journal Article | PUB-ID: 2911273
Fast and reliable strain characterization of Streptomyces lividans through micro-scale cultivation.
Koepff J, Keller M, Tsolis CK, Busche T, Rückert C, Hamed MB, Anné J, Kalinowski J, Wiechert W, Economou A, Oldiges M (2017)
Biotechnol Bioeng.
PUB | DOI | PubMed | Europe PMC
 
[223]
2017 | Journal Article | PUB-ID: 2911274 PUB | DOI | PubMed | Europe PMC
 
[222]
2017 | Journal Article | PUB-ID: 2911272
Monitoring global protein thiol-oxidation and protein S-mycothiolation in Mycobacterium smegmatis under hypochlorite stress.
Hillion M, Bernhardt J, Busche T, Rossius M, Maaß S, Becher D, Rawat M, Wirtz M, Hell R, Rückert C, Kalinowski J, et al. (2017)
Sci Rep 7(1): 1195.
PUB | DOI | PubMed | Europe PMC
 
[221]
2017 | Journal Article | PUB-ID: 2911017
Transcriptome profiling of the Australian arid-land plant Eremophila serrulata (A.DC.) Druce (Scrophulariaceae) for the identification of monoterpene synthases
Kracht ON, Ammann A-C, Stockmann J, Wibberg D, Kalinowski J, Piotrowski M, Kerr R, Brueck T, Kourist R (2017)
PHYTOCHEMISTRY 136: 15-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[220]
2017 | Journal Article | PUB-ID: 2910668
A Mitochondrial Autonomously Replicating Sequence from Pichia pastoris for Uniform High Level Recombinant Protein Production
Friehs K, Schwarzhans JP, Luttermann T, Wibberg D, Winkler A, Hübner W, Huser T, Kalinowski J (2017)
Frontiers in Microbiology 8: 780.
PUB | PDF | DOI
 
[219]
2017 | Journal Article | PUB-ID: 2910380
New oxaphenalene derivative from marine-derived Streptomyces griseorubens sp ASMR4
Hamed A, Abdel-Razek AS, Frese M, Wibberg D, El-Haddad AF, Ibrahim TMA, Kalinowski J, Sewald N, Shaaban M (2017)
ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES 72(1): 53-62.
PUB | DOI | WoS
 
[218]
2017 | Journal Article | PUB-ID: 2909432 PUB | DOI | WoS
 
[217]
2017 | Journal Article | PUB-ID: 2908076
Whole Genome Sequencing of 39 Invasive Streptococcus pneumoniae Sequence Type 199 Isolates Revealed Switches from Serotype 19A to 15B
Makarewicz O, Lucas M, Brandt C, Herrmann L, Albersmeier A, Rückert C, Blom J, Goesmann A, van der Linden M, Kalinowski J, Pletz MW (2017)
PLoS One 12(1): e0169370.
PUB | DOI | WoS | PubMed | Europe PMC
 
[216]
2017 | Journal Article | PUB-ID: 2908419
Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T
Torres Tejerizo GA, Wibberg D, Winkler A, Ormeño-Orrillo E, Martínez-Romero E, Niehaus K, Pühler A, Kalinowski J, Lagares A, Schlüter A, Pistorio M (2017)
Genome Announcements 5(4): e01513-16.
PUB | PDF | DOI
 
[215]
2016 | Journal Article | PUB-ID: 2904976
Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa)
Blifernez-Klassen O, Wibberg D, Winkler A, Blom J, Goesmann A, Kalinowski J, Kruse O (2016)
Genome Announcements 4(3): e00524-16.
PUB | PDF | DOI
 
[214]
2016 | Journal Article | PUB-ID: 2905947
Corynebacterium crudilactis sp. nov., a new Corynebacterium species isolated from raw cow´s milk.
Zimmermann J, Rückert C, Kalinowski J, Lipski A (2016)
Int J Syst Evol Microbiol 66: 5288-5293.
PUB | DOI | WoS | PubMed | Europe PMC
 
[213]
2016 | Journal Article | PUB-ID: 2907685
Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177T isolated from a marine sponge
Schaffert L, Albersmeier A, Winkler A, Kalinowski J, Zotchev SB, Rückert C (2016)
Standards in Genomic Sciences 11: 91.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[212]
2016 | Journal Article | PUB-ID: 2904989
High-throughput sequencing and graph-based cluster analysis facilitate microsatellite development from a highly complex genome
Shah A, Schielzeth H, Albersmeier A, Kalinowski J, Hoffman J (2016)
Ecology and Evolution 16(6): 5718-5727.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[211]
2016 | Journal Article | PUB-ID: 2907679
Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing
Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K (2016)
Scientific Reports 6: 38952.
PUB | PDF | DOI | WoS
 
[210]
2016 | Conference Abstract | PUB-ID: 2907640
Chassis organism from Corynebacterium glutamicum – Genome reduction as a tool toward improved strains for synthetic biology and industrial biotechnology
Baumgart M, Unthan S, Radek A, Herbst M, Siebert D, Brühl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, et al. (2016)
New Biotechnology 33: S25.
PUB | DOI
 
[209]
2016 | Journal Article | PUB-ID: 2907722
A systems biology approach reveals major metabolic changes in the thermoacidophilic archaeon Sulfolobus solfataricus in response to the carbon source L-fucose versus D-glucose
Wolf J, Stark H, Fafenrot K, Albersmeier A, Pham TK, Mueller KB, Meyer BH, Hoffmann L, Shen L, Albaum SP, Kouril T, et al. (2016)
MOLECULAR MICROBIOLOGY 102(5): 882-908.
PUB | DOI | WoS
 
[208]
2016 | Journal Article | PUB-ID: 2907748 PUB | DOI | WoS | PubMed | Europe PMC
 
[207]
2016 | Journal Article | PUB-ID: 2904704
Complete mitochondrial genome of the scleractinian coral Porites rus
Celis JS, Wibberg D, Winkler A, Wilke T, Kalinowski J (2016)
Mitochondrial DNA 27(5): 3695-3696.
PUB | DOI | WoS | PubMed | Europe PMC
 
[206]
2016 | Journal Article | PUB-ID: 2906720
An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH
Nguyen TV, Wibberg D, Battenberg K, Blom J, Vanden Heuvel B, Berry AM, Kalinowski J, Pawlowski K (2016)
BMC Genomics 17: 796.
PUB | DOI | WoS | PubMed | Europe PMC
 
[205]
2016 | Journal Article | PUB-ID: 2903655
Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization
Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K (2016)
Microbial Cell Factories 15: 84.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[204]
2016 | Journal Article | PUB-ID: 2905632
Corynebacterium glutamicum ggtB encodes a functional gamma-glutamyl transpeptidase with gamma-glutamyl dipeptide synthetic and hydrolytic activity
Walter F, Grenz S, Ortseifen V, Persicke M, Kalinowski J (2016)
Journal of Biotechnology 232: 99-109.
PUB | DOI | WoS | PubMed | Europe PMC
 
[203]
2016 | Journal Article | PUB-ID: 2901243
Comparative proteome analysis of Actinoplanes sp SE50/110 grown with maltose or glucose shows Minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Wolf T, Zemke T, Wehmeier UF, Hecker M, Kalinowski J, et al. (2016)
Journal of Proteomics 131: 140-148.
PUB | DOI | WoS | PubMed | Europe PMC
 
[202]
2016 | Journal Article | PUB-ID: 2905630
Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors
Gren T, Ortseifen V, Wibberg D, Schneiker-Bekel S, Bednarz H, Niehaus K, Zemke T, Persicke M, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 232: 79-88.
PUB | DOI | WoS | PubMed | Europe PMC
 
[201]
2016 | Journal Article | PUB-ID: 2905505
Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System
Wolf T, Gren T, Thieme E, Wibberg D, Zemke T, Pühler A, Kalinowski J (2016)
Journal of Biotechnology 231: 122-128.
PUB | DOI | WoS | PubMed | Europe PMC
 
[200]
2016 | Journal Article | PUB-ID: 2905959
A gene cluster for the biosynthesis of moenomycin family antibiotics in the genome of teicoplanin producer Actinoplanes teichomyceticus
Horbal L, Ostash B, Luzhetskyy A, Walker S, Kalinowski J, Fedorenko V (2016)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 100(17): 7629-7638.
PUB | DOI | WoS | PubMed | Europe PMC
 
[199]
2016 | Journal Article | PUB-ID: 2905634
Deciphering the Transcriptional Response Mediated by the Redox-Sensing System HbpS-SenS-SenR from Streptomycetes
Busche T, Winkler A, Wedderhoff I, Rückert C, Kalinowski J, Lucana DO de O (2016)
PLOS ONE 11(8): e0159873.
PUB | DOI | WoS | PubMed | Europe PMC
 
[198]
2016 | Journal Article | PUB-ID: 2905633
An influence of the copy number of biosynthetic gene clusters on the production level of antibiotics in a heterologous host
Manderscheid N, Bilyk B, Busche T, Kalinowski J, Paululat T, Bechthold A, Petzke L, Luzhetskyy A (2016)
JOURNAL OF BIOTECHNOLOGY 232: 110-117.
PUB | DOI | WoS | PubMed | Europe PMC
 
[197]
2016 | Journal Article | PUB-ID: 2901418
Soil suppressiveness and its relations with the microbial community in a Brazilian subtropical agroecosystem under different management systems
Campos SB, Lisboa BB, Camargo FAO, Bayer C, Sczyrba A, Dirksen P, Albersmeier A, Kalinowski J, Beneduzi A, Costa PB, Passaglia LMP, et al. (2016)
Soil Biology and Biochemistry 96: 191-197.
PUB | DOI | WoS
 
[196]
2016 | Journal Article | PUB-ID: 2901383
Isolation and genome sequencing of four Arctic marine Psychrobacter strains exhibiting multicopper oxidase activity.
Moghadam MS, Albersmeier A, Winkler A, Cimmino L, Rise K, Hohmann-Marriott MF, Kalinowski J, Rückert C, Wentzel A, Lale R (2016)
BMC Genomics 17(1): 117.
PUB | DOI | WoS | PubMed | Europe PMC
 
[195]
2015 | Conference Abstract | PUB-ID: 2902782
Multi-level omics analysis of combination effects of (tri-)azoles in a set of different cell lines
Knebel C, Marx-Stoelting P, Pfeil R, Seeger B, Steinberg P, Mentz A, Bednarz H, Niehaus K, Kalinowski J, Noll T, Heise T (2015)
Toxicology Letters 238(2): S355.
PUB | DOI | WoS
 
[194]
2015 | Journal Article | PUB-ID: 2764185
Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential
Schafhauser T, Wibberg D, Rückert C, Winkler A, Flor L, van Pée K-H, Fewer DP, Sivonen K, Jahn L, Ludwig-Müller J, Caradec T, et al. (2015)
Journal of Biotechnology 211: 101-102.
PUB | DOI | WoS | PubMed | Europe PMC
 
[193]
2015 | Journal Article | PUB-ID: 2732884
Complete genome sequence of Paenibacillus riograndensis SBR5T, a Gram-positive diazotrophic rhizobacterium
Fernandes de Brito L, Bach E, Kalinowski J, Rückert C, Wibberg D, Passaglia L, Wendisch VF (2015)
Journal of Biotechnology 207: 30-31.
PUB | DOI | WoS | PubMed | Europe PMC
 
[192]
2015 | Journal Article | PUB-ID: 2709783
Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid
Ortseifen V, Winkler A, Albersmeier A, Wendler S, Pühler A, Kalinowski J, Rückert C (2015)
Journal of Biotechnology 194: 81-83.
PUB | DOI | WoS | PubMed | Europe PMC
 
[191]
2015 | Journal Article | PUB-ID: 2764307
Comprehensive proteome analysis of Actinoplanes sp SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster
Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Walter F, Wolf T, Zemke T, Wehmeier UF, Hecker M, et al. (2015)
Journal of Proteomics 125: 1-16.
PUB | DOI | WoS | PubMed | Europe PMC
 
[190]
2015 | Journal Article | PUB-ID: 2759737 PUB | DOI | WoS | PubMed | Europe PMC
 
[189]
2015 | Journal Article | PUB-ID: 2706344 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[188]
2015 | Journal Article | PUB-ID: 2901251
Diversity of ABBA Prenyltransferases in Marine Streptomyces sp CNQ-509: Promiscuous Enzymes for the Biosynthesis of Mixed Terpenoid Compounds
Leipoldt F, Zeyhle P, Kulik A, Kalinowski J, Heide L, Kaysser L (2015)
Plos One 10(12): e0143237.
PUB | DOI | WoS | PubMed | Europe PMC
 
[187]
2015 | Journal Article | PUB-ID: 2900131
De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite
Pauli M, Chakarov N, Rupp O, Kalinowski J, Goesmann A, Sorenson M, Krüger O, Hoffman J (2015)
BMC Genomics 16: 1038.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[186]
2015 | Journal Article | PUB-ID: 2771746
Complete Genome Sequence of Streptomyces sp. CNQ-509, a Prolific Producer of Meroterpenoid Chemistry
Rückert C, Leipoldt F, Zeyhle P, Fenical W, Jensen PR, Kalinowski J, Heide L, Kaysser L (2015)
Journal of Biotechnology 216: 140-141.
PUB | DOI | WoS | PubMed | Europe PMC
 
[185]
2015 | Journal Article | PUB-ID: 2721868
Genome sequence of the soil bacterium Corynebacterium callunae type strain DSM 20147T
Persicke M, Albersmeier A, Bednarz H, Niehaus K, Kalinowski J, Rückert C (2015)
Standards in Genomic Sciences 10: 5.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[184]
2015 | Journal Article | PUB-ID: 2901032
Biosensor-driven adaptive laboratory evolution of L-valine production in Corynebacterium glutamicum
Mahr R, Gaetgens C, Gaetgens J, Polen T, Kalinowski J, Frunzke J (2015)
Metabolic Engineering 32: 184-194.
PUB | DOI | WoS | PubMed | Europe PMC
 
[183]
2015 | Journal Article | PUB-ID: 2719877
Complete genome sequence of Streptomyces lividans TK24
Rückert C, Albersmeier A, Busche T, Jaenicke S, Winkler A, Friðjónsson ÓH, Hreggviðsson GÓ, Lambert C, Badcock D, Bernaerts K, Anne J, et al. (2015)
Journal of Biotechnology 199: 21-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[182]
2015 | Journal Article | PUB-ID: 2700185
Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana
Al-Dilaimi A, Bednarz H, Lömker A, Niehaus K, Kalinowski J, Rückert C (2015)
International journal of systematic and evolutionary microbiology 65(Pt 1): 177-182.
PUB | DOI | WoS | PubMed | Europe PMC
 
[181]
2015 | Journal Article | PUB-ID: 2689771
Chassis organism from Corynebacterium glutamicum – a top-down approach to identify and delete irrelevant gene clusters
Unthan S, Baumgart M, Radek A, Herbst M, Siebert D, Brühl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, et al. (2015)
Biotechnology Journal 10(2): 290-301.
PUB | DOI | WoS | PubMed | Europe PMC
 
[180]
2015 | Journal Article | PUB-ID: 2764512
Complete genome sequence of Rhodococcus erythropolis BG43 (DSM 46869), a degrader of Pseudomonas aeruginosa quorum sensing signal molecules
Rückert C, Birmes FS, Müller C, Niewerth H, Winkler A, Fetzner S, Kalinowski J (2015)
Journal of biotechnology 211: 99-100.
PUB | DOI | WoS | PubMed | Europe PMC
 
[179]
2015 | Journal Article | PUB-ID: 2771555
Rhodococcus erythropolis BG43 genes mediating Pseudomonas aeruginosa quinolone signal degradation and virulence factor attenuation
Müller C, Birmes FS, Rückert C, Kalinowski J, Fetzner S (2015)
Applied and Environmental Microbiology 81(22): 7720-7729.
PUB | DOI | WoS | PubMed | Europe PMC
 
[178]
2015 | Journal Article | PUB-ID: 2756434
Sphingopyxis fribergensis sp. nov., a soil bacterium with the ability to degrade styrene and phenylacetic acid
Oelschlägel M, Rückert C, Kalinowski J, Schmidt G, Schlömann M, Tischler D (2015)
International journal of systematic and evolutionary microbiology 65(Part 9): 3008-3015.
PUB | DOI | WoS | PubMed | Europe PMC
 
[177]
2015 | Journal Article | PUB-ID: 2735160
Engineering L-arabinose metabolism in triacylglycerol-producing Rhodococcus opacus for lignocellulosic fuel production
Kurosawa K, Plassmeier J, Kalinowski J, Rückert C, Sinskey AJ (2015)
Metabolic engineering.
PUB | DOI | WoS | PubMed | Europe PMC
 
[176]
2015 | Journal Article | PUB-ID: 2764291
The adpA-like regulatory gene from Actinoplanes teichomyceticus: in silico analysis and heterologous expression
Ostash B, Yushchuk O, Tistechok S, Mutenko H, Horbal L, Muryn A, Dacyuk Y, Kalinowski J, Luzhetskyy A, Fedorenko V (2015)
World Journal of Microbiology and Biotechnology 31(8): 1297-1301.
PUB | DOI | WoS | PubMed | Europe PMC
 
[175]
2015 | Journal Article | PUB-ID: 2758666
The Intraperitoneal Transcriptome of the Opportunistic Pathogen Enterococcus faecalis in Mice
Muller C, Cacaci M, Sauvageot N, Sanguinetti M, Rattei T, Eder T, Giard J-C, Kalinowski J, Hain T, Hartke A (2015)
PLoS ONE 10(5).
PUB | DOI | WoS | PubMed | Europe PMC
 
[174]
2015 | Journal Article | PUB-ID: 2723776
Transcriptional Regulation of the Vanillate Utilization Genes (vanABK Operon) of Corynebacterium glutamicum by VanR, a PadR-Like Repressor
Heravi KM, Lange J, Watzlawick H, Kalinowski J, Altenbuchner J (2015)
Journal of Bacteriology 197(5): 959-972.
PUB | DOI | WoS
 
 
[172]
2014 | Journal Article | PUB-ID: 2662843
Genome rearrangements of Streptomyces albus J1074 lead to the carotenoid gene cluster activation
Myronovskyi M, Tokovenko B, Brötz E, Rückert C, Kalinowski J, Luzhetskyy A (2014)
Applied microbiology and biotechnology 98(2): 795-806.
PUB | DOI | WoS | PubMed | Europe PMC
 
[171]
2014 | Journal Article | PUB-ID: 2693296
Complete Genome Sequence of Corynebacterium casei LMG S-19264T (=DSM 44701T), isolated from a smear-ripened cheese
Walter F, Albersmeier A, Kalinowski J, Rückert C (2014)
Journal of Biotechnology 189: 76-77.
PUB | DOI | WoS | PubMed | Europe PMC
 
[170]
2014 | Journal Article | PUB-ID: 2674387
ReadXplorer - Visualization and Analysis of Mapped Sequences
Hilker R, Stadermann KB, Doppmeier D, Kalinowski J, Stoye J, Straube J, Winnebald J, Goesmann A (2014)
Bioinformatics 30(16): 2247-2254.
PUB | DOI | WoS | PubMed | Europe PMC
 
[169]
2014 | Journal Article | PUB-ID: 2676806
Identifizierung von Promotoren in Corynebacterium glutamicum
Busche T, Pfeifer-Sancar K, Rückert C, Kalinowski J (2014)
BIOspektrum 20(3): 284-287.
PUB | DOI
 
[168]
2014 | Journal Article | PUB-ID: 2710431
Carbon source dependent biosynthesis of acarviose metabolites in Actinoplanes sp SE50/110
Wendler S, Ortseifen V, Persicke M, Klein A, Neshat A, Niehaus K, Schneiker-Bekel S, Walter F, Wehmeier UF, Kalinowski J, Pühler A (2014)
Journal of Biotechnology 191: 113-120.
PUB | DOI | WoS | PubMed | Europe PMC
 
[167]
2014 | Journal Article | PUB-ID: 2665038
Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts
Schwientek P, Neshat A, Kalinowski J, Klein A, Rückert C, Schneiker-Bekel S, Wendler S, Stoye J, Pühler A (2014)
Journal of Biotechnology 190: 85-95.
PUB | DOI | WoS | PubMed | Europe PMC
 
[166]
2014 | Journal Article | PUB-ID: 2682811
Vom Schärfesensor zur mikrobiellen Brennstoffzelle
Lübke N-C, Wolf T, Braun R, Rückert C, Kalinowski J (2014)
BIOspektrum 20(4): 468-469.
PUB | DOI
 
[165]
2014 | Journal Article | PUB-ID: 2645148
Histidine biosynthesis, its regulation and biotechnological application in Corynebacterium glutamicum
Kulis-Horn R, Persicke M, Kalinowski J (2014)
Microbial Biotechnology 7(1): 5-25.
PUB | DOI | WoS | PubMed | Europe PMC
 
[164]
2014 | Journal Article | PUB-ID: 2706029
ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis
Kessler N, Walter F, Persicke M, Albaum S, Kalinowski J, Goesmann A, Niehaus K, Nattkemper TW (2014)
PLoS ONE 9(11): e113909.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[163]
2014 | Journal Article | PUB-ID: 2689746
Complete genome sequence of *Bacillus methanolicus* MGA3, a thermotolerant amino acid producing methylotroph
Irla M, Neshat A, Winkler A, Albersmeier A, Heggeset TM, Brautaset T, Kalinowski J, Wendisch VF, Rückert C (2014)
Journal of Biotechnology 188: 110-111.
PUB | DOI | WoS | PubMed | Europe PMC
 
[162]
2014 | Journal Article | PUB-ID: 2689773
GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers
Jünemann S, Prior K, Albersmeier A, Albaum S, Kalinowski J, Goesmann A, Stoye J, Harmsen D (2014)
PLOS ONE 9(9): e107014.
PUB | DOI | WoS | PubMed | Europe PMC
 
[161]
2014 | Journal Article | PUB-ID: 2664976
Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkämper A, Pühler A, Biener R, Schwartz D, Kalinowski J (2014)
Journal of biotechnology 178: 41-42.
PUB | DOI | WoS | PubMed | Europe PMC
 
[160]
2014 | Journal Article | PUB-ID: 2689749 PUB | DOI | WoS | PubMed | Europe PMC
 
[159]
2014 | Journal Article | PUB-ID: 2676082
Genomics of Sponge-Associated Streptomyces spp. Closely Related to Streptomyces albus J1074: Insights into Marine Adaptation and Secondary Metabolite Biosynthesis Potential
Ian E, Malko DB, Sekurova ON, Bredholt H, Rückert C, Borisova ME, Albersmeier A, Kalinowski J, Gelfand MS, Zotchev SB (2014)
PloS one 9(5): 96719.
PUB | DOI | WoS | PubMed | Europe PMC
 
[158]
2014 | Journal Article | PUB-ID: 2693289
Complete Genome Sequence of Corynebacterium vitaeruminis DSM 20294T, isolated from the cow rumen as a vitamin B producer
Al-Dilaimi A, Albersmeier A, Kalinowski J, Rückert C (2014)
Journal of Biotechnology 189: 70-71.
PUB | DOI | WoS | PubMed | Europe PMC
 
[157]
2014 | Journal Article | PUB-ID: 2693535
Complete Genome Sequence of the Actinobacterium Amycolatopsis japonica MG417-CF17T (=DSM 44213T) producing (S,S)-N,N'-ethylenediaminedisuccinic acid
Stegmann E, Albersmeier A, Spohn M, Gert H, Weber T, Wohlleben W, Kalinowski J, Rückert C (2014)
Journal of biotechnology 189: 46-47.
PUB | DOI | WoS | PubMed | Europe PMC
 
[156]
2014 | Journal Article | PUB-ID: 2647986
Draft Genome Sequence of Streptomyces roseochromogenes subsp. oscitans DS 12.976, Producer of the Aminocoumarin Antibiotic Clorobiocin
Rückert C, Kalinowski J, Heide L, Apel AK (2014)
Genome announcements 2(1): e01147-13.
PUB | DOI | PubMed | Europe PMC
 
[155]
2014 | Journal Article | PUB-ID: 2647992
Draft Genome Sequence of Streptomyces niveus NCIMB 11891, Producer of the Aminocoumarin Antibiotic Novobiocin
Flinspach K, Rückert C, Kalinowski J, Heide L, Apel AK (2014)
Genome announcements 2(1): e01146-13.
PUB | DOI | PubMed | Europe PMC
 
[154]
2014 | Journal Article | PUB-ID: 2653196
An environmental bacterial taxon with a large and distinct metabolic repertoire
Wilson MC, Mori T, Rückert C, Uria AR, Helf MJ, Takada K, Gernert C, Steffens UAE, Heycke N, Schmitt S, Rinke C, et al. (2014)
Nature 506(7486): 58-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[153]
2014 | Journal Article | PUB-ID: 2699107
Complete genome sequence of producer of the glycopeptide antibiotic Aculeximycin Kutzneria albida DSM 43870T, a representative of minor genus of Pseudonocardiaceae
Rebets Y, Tokovenko B, Lushchyk I, Rückert C, Zaburannyi N, Bechthold A, Kalinowski J, Luzhetskyy A (2014)
BMC genomics 15(1): 885.
PUB | DOI | WoS | PubMed | Europe PMC
 
[152]
2014 | Journal Article | PUB-ID: 2707667
A Membrane-Bound Prenyltransferase Catalyzes the O-Prenylation of 1,6-Dihydroxyphenazine in the Marine Bacterium Streptomyces sp CNQ-509
Zeyhle P, Bauer JS, Steimle M, Leipoldt F, Roesch M, Kalinowski J, Gross H, Heide L (2014)
ChemBioChem 15(16): 2385-2392.
PUB | DOI | WoS | PubMed | Europe PMC
 
[151]
2014 | Journal Article | PUB-ID: 2685853
Genome-Based Discovery of a Novel Membrane-Bound 1,6-Dihydroxyphenazine Prenyltransferase from a Marine Actinomycete
Zeyhle P, Bauer JS, Kalinowski J, Shin-ya K, Gross H, Heide L (2014)
PLoS ONE 9(6).
PUB | DOI | WoS | PubMed | Europe PMC
 
[150]
2014 | Journal Article | PUB-ID: 2656728
Protein S-Mycothiolation Functions as Redox-Switch and Thiol Protection Mechanism in Corynebacterium glutamicum Under Hypochlorite Stress
Chi BK, Busche T, Van Laer K, Baesell K, Becher D, Clermont L, Seibold GM, Persicke M, Kalinowski J, Messens J, Antelmann H (2014)
Antioxidants & Redox Signaling 20(4): 589-605.
PUB | DOI | WoS | PubMed | Europe PMC
 
[149]
2013 | Journal Article | PUB-ID: 2614036
Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 - a platform strain for basic research and industrial biotechnology
Baumgart M, Unthan S, Rückert C, Sivalingam J, Grünberger A, Kalinowski J, Bott M, Noack S, Frunzke J (2013)
Applied and environmental microbiology 79(19): 6006-6015.
PUB | DOI | WoS | PubMed | Europe PMC
 
[148]
2013 | Journal Article | PUB-ID: 2643373
Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique
Pfeifer-Sancar K, Mentz A, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 888.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[147]
2013 | Journal Article | PUB-ID: 2631969
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 714.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[146]
2013 | Journal Article | PUB-ID: 2631977
A novel type of N-acetylglutamate synthase is involved in the first step of arginine biosynthesis in Corynebacterium glutamicum
Petri K, Walter F, Persicke M, Rückert C, Kalinowski J (2013)
BMC Genomics 14(1): 713.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[145]
2013 | Journal Article | PUB-ID: 2614906
The cytosolic and extracellular proteomes of Actinoplanes sp. SE50/110 led to the identification of gene products involved in acarbose metabolism
Wendler S, Hürtgen D, Kalinowski J, Klein A, Niehaus K, Schulte F, Schwientek P, Wehlmann H, Wehmeier UF, Pühler A (2013)
Journal of Biotechnology 167(2): 178-189.
PUB | DOI | WoS | PubMed | Europe PMC
 
[144]
2013 | Journal Article | PUB-ID: 2632946
Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil
Köhler KAK, Rückert C, Schatschneider S, Vorhölter F-J, Szczepanowski R, Blank LM, Niehaus K, Goesmann A, Pühler A, Kalinowski J, Schmid A (2013)
Journal of Biotechnology 168(4): 729-730.
PUB | DOI | WoS | PubMed | Europe PMC
 
[143]
2013 | Journal Article | PUB-ID: 2548236
Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media
Schwientek P, Wendler S, Neshat A, Eirich C, Rückert C, Klein A, Wehmeier UF, Kalinowski J, Stoye J, Pühler A (2013)
Journal of Biotechnology 167(2): 166-177.
PUB | DOI | WoS | PubMed | Europe PMC
 
[142]
2013 | Journal Article | PUB-ID: 2645668
Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production
Bogen C, Al-Dilaimi A, Albersmeier A, Wichmann J, Grundmann M, Rupp O, Lauersen KJ, Blifernez-Klassen O, Kalinowski J, Goesmann A, Mussgnug JH, et al. (2013)
BMC Genomics 14(1): 926.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[141]
2013 | Journal Article | PUB-ID: 2631956
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Iftime D, Musiol EM, Blin K, Wohlleben W, Pühler A, Kalinowski J, Weber T (2013)
Journal of Biotechnology 168(4): 739-740.
PUB | DOI | WoS | PubMed | Europe PMC
 
[140]
2013 | Journal Article | PUB-ID: 2566922
Updating benchtop sequencing performance comparison
Jünemann S, Sedlazeck FJ, Prior K, Albersmeier A, John U, Kalinowski J, Mellmann A, Goesmann A, von Haeseler A, Stoye J, Harmsen D (2013)
Nature Biotechnology 31(4): 294-296.
PUB | DOI | WoS | PubMed | Europe PMC
 
[139]
2013 | Journal Article | PUB-ID: 2641228
Corrigendum: Updating benchtop sequencing performance comparison
Jünemann S, Sedlazeck FJ, Prior K, Albersmeier A, John U, Kalinowski J, Mellmann A, Goesmann A, von Haeseler A, Stoye J, Harmsen D (2013)
Nature biotechnology 31(12): 1148.
PUB | DOI | WoS | PubMed | Europe PMC
 
[138]
2013 | Journal Article | PUB-ID: 2644101
Genome sequence of the marine bacterium Corynebacterium maris type strain Coryn-1T (= DSM 45190T)
Schaffert L, Albersmeier A, Bednarz H, Niehaus K, Kalinowski J, Rückert C (2013)
Standards in Genomic Sciences 8(3): 516-524.
PUB | DOI | WoS | PubMed | Europe PMC
 
[137]
2013 | Journal Article | PUB-ID: 2648007
Genome sequence of the squalene-degrading bacterium Corynebacterium terpenotabidum type strain Y-11T (= DSM 44721T)
Rückert C, Albersmeier A, Al-Dilaimi A, Bednarz H, Niehaus K, Szczepanowski R, Kalinowski J (2013)
Standards in Genomic Sciences 9(3): 505-513.
PUB | DOI | WoS | PubMed | Europe PMC
 
[136]
2013 | Journal Article | PUB-ID: 2555355
A propionate-inducible expression system based on the Corynebacterium glutamicum prpD2 promoter and PrpR activator and its application for the redirection of amino acid biosynthesis pathways
Plassmeier J, Busche T, Molck S, Persicke M, Pühler A, Rückert C, Kalinowski J (2013)
Journal of Biotechnology 163(2): 225-232.
PUB | DOI | WoS | PubMed | Europe PMC
 
[135]
2013 | Journal Article | PUB-ID: 2558460
Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study
Roetzer A, Diel R, Kohl TA, Rückert C, Nübel U, Blom J, Wirth T, Jaenicke S, Schuback S, Rüsch-Gerdes S, Supply P, et al. (2013)
PLoS medicine 10(2): e1001387.
PUB | DOI | WoS | PubMed | Europe PMC
 
[134]
2013 | Journal Article | PUB-ID: 2625606 PUB | DOI | WoS | PubMed | Europe PMC
 
[133]
2013 | Journal Article | PUB-ID: 2555771
Corynebacterium glutamicum promoters: a practical approach
Pátek M, Holátko J, Busche T, Kalinowski J, Nešvera J (2013)
Microbial Biotechnology 6(2): 103-117.
PUB | DOI | WoS | PubMed | Europe PMC
 
[132]
2012 | Journal Article | PUB-ID: 2486060
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
Schwientek P, Szczepanowski R, Rückert C, Kalinowski J, Klein A, Selber K, Wehmeier UF, Stoye J, Pühler A (2012)
BMC Genomics 13(1): 112.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[131]
2012 | Journal Article | PUB-ID: 2405255
MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example
Persicke M, Rückert C, Plassmeier J, Stutz L, Kessler N, Kalinowski J, Goesmann A, Neuweger H (2012)
Metabolomics 8(2): 310-322.
PUB | DOI | WoS
 
[130]
2012 | Journal Article | PUB-ID: 2526269
Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
Strobel T, Al-Dilaimi A, Blom J, Gessner A, Kalinowski J, Luzhetska M, Pühler A, Szczepanowski R, Bechthold A, Rückert C (2012)
BMC Genomics 13(1): 465.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[129]
2012 | Conference Abstract | PUB-ID: 2530508
Chemical surprises from an uncultivated sponge symbiont
Piel J, Freeman MF, Gurgui C, Helf M, Morinaka B, Wilson MC, Mori T, Rückert C, Steffens U, Takada K, Gernert C, et al. (2012)
Planta Medica 78(11): 1040-+.
PUB | WoS
 
[128]
2012 | Journal Article | PUB-ID: 2551038
Genome sequence of the halotolerant bacterium Corynebacterium halotolerans type strain YIM 70093T (= DSM 44683T)
Rückert C, Albersmeier A, Al-Dilaimi A, Niehaus K, Szczepanowski R, Kalinowski J (2012)
Standards in Genomic Sciences 7(2): 284-293.
PUB | DOI | WoS | PubMed | Europe PMC
 
[127]
2012 | Journal Article | PUB-ID: 2530221
The genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin
Jankowitsch F, Schwarz J, Rückert C, Gust B, Szczepanowski R, Blom J, Pelzer S, Kalinowski J, Mack M (2012)
Journal of bacteriology 194(24): 6818-6827.
PUB | DOI | WoS | PubMed | Europe PMC
 
[126]
2012 | Journal Article | PUB-ID: 2486027
Arabitol metabolism of Corynebacterium glutamicum and its regulation by AtlR
Laslo T, von Zaluskowski P, Gabris C, Lodd E, Rückert C, Dangel P, Kalinowski J, Auchter M, Seibold G, Eikmanns BJ (2012)
Journal of bacteriology 194(5): 941-955.
PUB | DOI | WoS | PubMed | Europe PMC
 
[125]
2012 | Journal Article | PUB-ID: 2530872
Draft Genome Sequence of Bacillus anthracis UR-1, Isolated from a German Heroin User
Rückert C, Licht K, Kalinowski J, Espírito Santo C, Antwerpen M, Hanczaruk M, Reischl U, Holzmann T, Gessner A, Tiemann C, Grass G (2012)
Journal of bacteriology 194(21): 5997-5998.
PUB | DOI | WoS | PubMed | Europe PMC
 
[124]
2012 | Journal Article | PUB-ID: 2548248
Draft genome sequence of Bacillus anthracis BF-1, Isolated from Bavarian cattle
Antwerpen M, Proença DN, Rückert C, Licht K, Kalinowski J, Hanczaruk M, Tiemann C, Grass G (2012)
Journal of bacteriology 194(22): 6360-6361.
PUB | DOI | WoS | PubMed | Europe PMC
 
[123]
2012 | Journal Article | PUB-ID: 2520163
Phenylacetic Acid Catabolism and Its Transcriptional Regulation in Corynebacterium glutamicum
Chen X, Kohl TA, Rückert C, Rodionov DA, Li L-H, Ding J-Y, Kalinowski J, Liu S-J (2012)
Applied and environmental microbiology 78(16): 5796-5804.
PUB | DOI | WoS | PubMed | Europe PMC
 
[122]
2012 | Journal Article | PUB-ID: 2528277 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[121]
2012 | Journal Article | PUB-ID: 2560259
The two-component system ChrSA is crucial for haem tolerance and interferes with HrrSA in haem-dependent gene regulation in Corynebacterium glutamicum
Heyer A, Gaetgens C, Hentschel E, Kalinowski J, Bott M, Frunzke J (2012)
Microbiology 158(Pt_12): 3020-3031.
PUB | DOI | WoS | PubMed | Europe PMC
 
[120]
2012 | Journal Article | PUB-ID: 2545867
Identification of Novel Cholesteatoma-related Gene Expression Signatures Using Full-genome Microarrays
Klenke C, Janowski SJ, Borck D, Widera D, Ebmeyer J, Kalinowski J, Leichtle A, Hofestädt R, Upile T, Kaltschmidt C, Kaltschmidt B, et al. (2012)
PLoS One 7(12): e52718.
PUB | DOI | WoS | PubMed | Europe PMC
 
[119]
2012 | Journal Article | PUB-ID: 2501701
rplC T460C Identified as a Dominant Mutation in Linezolid-Resistant Mycobacterium tuberculosis Strains
Beckert P, Hillemann D, Kohl T, Kalinowski J, Richter E, Niemann S, Feuerriegel S (2012)
Antimicrobial Agents and Chemotherapy 56(5): 2743-2745.
PUB | DOI | WoS | PubMed | Europe PMC
 
[118]
2011 | Conference Abstract | PUB-ID: 2289887
Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis
Hinse D, Vollmer T, Rückert C, Blom J, Kalinowski J, Knabbe C, Dreier J (2011)
Clinical Chemistry and Laboratory Medicine 49: S837.
PUB | WoS
 
[117]
2011 | Journal Article | PUB-ID: 2289952
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming
Blom J, Jakobi T, Doppmeier D, Jaenicke S, Kalinowski J, Stoye J, Goesmann A (2011)
Bioinformatics 27(10): 1351-1358.
PUB | DOI | WoS | PubMed | Europe PMC
 
[116]
2011 | Journal Article | PUB-ID: 1896635
RamA and RamB are global transcriptional regulators in Corynebacterium glutamicum and control genes for enzymes of the central metabolism
Auchter M, Cramer A, Hüser A, Rückert C, Emer D, Schwarz P, Arndt A, Lange C, Kalinowski J, Wendisch VF, Eikmanns BJ (2011)
J Biotechnol 154(2-3): 126-139.
PUB | DOI | WoS | PubMed | Europe PMC
 
[115]
2011 | Journal Article | PUB-ID: 2404808
Molecular characterization of PrpR, the transcriptional activator of propionate catabolism in Corynebacterium glutamicum
Plassmeier J, Persicke M, Pühler A, Sterthoff C, Rückert C, Kalinowski J (2011)
Journal of Biotechnology 159(1-2): 1-11.
PUB | DOI | WoS | PubMed | Europe PMC
 
[114]
2011 | Journal Article | PUB-ID: 2289494
Size exclusion chromatography-An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites
Persicke M, Plassmeier J, Neuweger H, Rückert C, Pühler A, Kalinowski J (2011)
Journal of Biotechnology 154(2-3): 171-178.
PUB | DOI | WoS | PubMed | Europe PMC
 
[113]
2011 | Journal Article | PUB-ID: 2394493
Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis
Hinse D, Vollmer T, Rückert C, Blom J, Kalinowski J, Knabbe C, Dreier J (2011)
BMC Genomics 12(1): 400.
PUB | DOI | WoS | PubMed | Europe PMC
 
[112]
2011 | Journal Article | PUB-ID: 2440558
A Novel N,N-8-Amino-8-demethyl-D-riboflavin Dimethyltransferase (RosA) Catalyzing the Two Terminal Steps of Roseoflavin Biosynthesis in Streptomyces davawensis
Jankowitsch F, Kuehm C, Kellner R, Kalinowski J, Pelzer S, Macheroux P, Mack M (2011)
Journal of Biological Chemistry 286(44): 38275-38285.
PUB | DOI | WoS | PubMed | Europe PMC
 
[111]
2011 | Journal Article | PUB-ID: 2289491
Regulatory and Metabolic Networks for Amino Acid Production by Corynebacterium glutamicum
Kalinowski J (2011)
Journal of Biotechnology 154(2-3): 99-100.
PUB | DOI | WoS | PubMed | Europe PMC
 
[110]
2011 | Journal Article | PUB-ID: 2093546
Control of adhA and sucR expression by the SucR regulator in Corynebacterium glutamicum
Auchter M, Laslo T, Fleischer C, Schiller L, Arndt A, Gaigalat L, Kalinowski J, Eikmanns BJ (2011)
Journal of Biotechnology 152(3): 77-86.
PUB | DOI | WoS | PubMed | Europe PMC
 
[109]
2010 | Journal Article | PUB-ID: 2486400
Advanced Genomics and Transcriptomics of Industrial Microorganisms
Kalinowski J, Rückert C, Szczepanowski R, Pühler A (2010)
Chemie Ingenieur Technik 82(9): 1518-1519.
PUB | DOI
 
[108]
2010 | Journal Article | PUB-ID: 1796753
Adaptation of Corynebacterium glutamicum to salt-stress conditions
Fraenzel B, Troetschel C, Rückert C, Kalinowski J, Poetsch A, Wolters DA (2010)
PROTEOMICS 10(3): 445-457.
PUB | DOI | WoS | PubMed | Europe PMC
 
[107]
2010 | Journal Article | PUB-ID: 1968272
Quantitative proteomic overview on the Corynebacterium glutamicum L-lysine producing strain DM1730
Fraenzel B, Poetsch A, Troetschel C, Persicke M, Kalinowski J, Wolters DA (2010)
Journal of Proteomics 73(12): 2336-2353.
PUB | DOI | WoS | PubMed | Europe PMC
 
[106]
2010 | Journal Article | PUB-ID: 1795939 PUB | DOI | WoS | PubMed | Europe PMC
 
[105]
2009 | Journal Article | PUB-ID: 1783813
Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example
Neuweger H, Persicke M, Albaum S, Bekel T, Dondrup M, Hüser AT, Winnebald J, Schneider J, Kalinowski J, Goesmann A (2009)
BMC Systems Biology 3(1): 82.
PUB | PDF | DOI | PubMed | Europe PMC
 
[104]
2009 | Journal Article | PUB-ID: 1588891
Functional genomics of pH homeostasis in Corynebacterium glutamicum revealed novel links between pH response, oxidative stress, iron homeostasis and methionine synthesis
Follmann M, Ochrombel I, Kraemer R, Troetschel C, Poetsch A, Rückert C, Hueser A, Persicke M, Seiferling D, Kalinowski J, Marin K (2009)
BMC Genomics 10(1): 621.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[103]
2009 | Journal Article | PUB-ID: 1635951
Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032
Nentwich SS, Brinkrolf K, Gaigalat L, Hueser AT, Rey DA, Mohrbach T, Marin K, Pühler A, Tauch A, Kalinowski J (2009)
MICROBIOLOGY 155(1): 150-164.
PUB | DOI | WoS | PubMed | Europe PMC
 
[102]
2009 | Journal Article | PUB-ID: 1589531
Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments
Albaum S, Neuweger H, Fraenzel B, Lange S, Mertens D, Troetschel C, Wolters D, Kalinowski J, Nattkemper TW, Goesmann A (2009)
Bioinformatics 25(23): 3128-3134.
PUB | DOI | WoS | PubMed | Europe PMC
 
[101]
2009 | Journal Article | PUB-ID: 1591178
From Corynebacterium glutamicum to Mycobacterium tuberculosis-towards transfers of gene regulatory networks and integrated data analyses with MycoRegNet
Krawczyk J, Kohl TA, Goesmann A, Kalinowski J, Baumbach J (2009)
NUCLEIC ACIDS RESEARCH 37(14): e97.
PUB | DOI | WoS | PubMed | Europe PMC
 
[100]
2009 | Journal Article | PUB-ID: 1635517
Microarray studies reveal a 'differential response' to moderate or severe heat shock of the HrcA- and HspR-dependent systems in Corynebacterium glutamicum
Barreiro C, Nakunst D, Hueser AT, de Paz HD, Kalinowski J, Martin JF (2009)
MICROBIOLOGY-SGM 155(2): 359-372.
PUB | DOI | WoS | PubMed | Europe PMC
 
[99]
2008 | Conference Abstract | PUB-ID: 1587496
Looking for non-coding RNAs in Corynebacterium glutamicum
Gkogkoglou K, Mentz A, Albersmeier A, Kalinowski J, Giegerich R (2008)
FEBS JOURNAL 275(Suppl. 1): 153.
PUB | WoS
 
[98]
2008 | Journal Article | PUB-ID: 1585918
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker-Bekel S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Goetker S, et al. (2008)
Journal of Biotechnology 136(1-2): 11-21.
PUB | DOI | WoS | PubMed | Europe PMC
 
[97]
2008 | Journal Article | PUB-ID: 1592345
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp michiganensis NCPPB382 reveals a large island involved in pathogenicity
Gartemann K-H, Abt B, Bekel T, Burger A, Engemann J, Fluegel M, Gaigalat L, Goesmann A, Graefen I, Kalinowski J, Kaup O, et al. (2008)
JOURNAL OF BACTERIOLOGY 190(6): 2138-2149.
PUB | DOI | WoS | PubMed | Europe PMC
 
[96]
2008 | Journal Article | PUB-ID: 1585560 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[95]
2008 | Book Chapter | PUB-ID: 2397428
Sulfur Metabolism in Corynebacterium glutamicum
Rückert C, Kalinowski J (2008)
In: Corynebacteria: Genomics and Molecular Biology. Burkovski A (Ed); Norfolk, UK: Caister Academic Press: 217-240.
PUB
 
[94]
2008 | Journal Article | PUB-ID: 1588078
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences
Brinkrolf K, Ploeger S, Solle S, Brune I, Nentwich SS, Hueser AT, Kalinowski J, Pühler A, Tauch A (2008)
MICROBIOLOGY 154(4): 1068-1081.
PUB | DOI | WoS | PubMed | Europe PMC
 
[93]
2008 | Conference Paper | PUB-ID: 2018381
ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract)
Albaum S, Neuweger H, Lange S, Mertens D, Runte K, Kalinowski J, Nattkemper TW, Goesmann A (2008)
In: HUPO 7th Annual World Congress.
PUB
 
[92]
2007 | Journal Article | PUB-ID: 1631327
Complete genome sequence of the myxobacterium Sorangium cellulosum
Schneiker-Bekel S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer MO, Bartels D, Bekel T, Beyer S, Bode E, Bode HB, et al. (2007)
Nature Biotechnology 25(11): 1281-1289.
PUB | DOI | WoS | PubMed | Europe PMC
 
[91]
2007 | Journal Article | PUB-ID: 1594426
A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411
Hansmeier N, Chao T-C, Daschkey S, Muesken M, Kalinowski J, Pühler A, Tauch A (2007)
PROTEOMICS 7(7): 1076-1096.
PUB | DOI | WoS | PubMed | Europe PMC
 
[90]
2007 | Journal Article | PUB-ID: 1593371
The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes
Nakunst D, Larisch C, Hueser AT, Tauch A, Pühler A, Kalinowski J (2007)
JOURNAL OF BACTERIOLOGY 189(13): 4696-4707.
PUB | DOI | WoS | PubMed | Europe PMC
 
[89]
2007 | Journal Article | PUB-ID: 1596102 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[88]
2007 | Journal Article | PUB-ID: 1593292 PUB | DOI | WoS | PubMed | Europe PMC
 
[87]
2007 | Journal Article | PUB-ID: 1594087
The Ic1R-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum
Brune I, Jochmann N, Brinkrolf K, Hueser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Pühler A, Tauch A (2007)
JOURNAL OF BACTERIOLOGY 189(7): 2720-2733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[86]
2007 | Journal Article | PUB-ID: 1783754
CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data
Neuweger H, Baumbach J, Albaum S, Bekel T, Dondrup M, Hüser AT, Kalinowski J, Oehm S, Pühler A, Rahmann S, Weile J, et al. (2007)
BMC Systems Biology 1(1): 55.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[85]
2007 | Journal Article | PUB-ID: 1783727
The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate: sugar phosphotransferase system (PTS) in Corynebacterium glutamicum
Gaigalat L, Schlüter J-P, Hartmann M, Mormann S, Tauch A, Pühler A, Kalinowski J (2007)
BMC Molecular Biology 8(1): 104.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[84]
2007 | Journal Article | PUB-ID: 1632884
FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum
Haenssler E, Mueller T, Jessberger N, Voelzke A, Plassmeier J, Kalinowski J, Kraemer R, Burkovski A (2007)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 76(3): 625-632.
PUB | DOI | WoS | PubMed | Europe PMC
 
[83]
2007 | Journal Article | PUB-ID: 1596355
Nitrogen metabolism and nitrogen control in corynebacteria: Variations of a common theme
Walter B, Haenssler E, Kalinowski J, Burkovski A (2007)
JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY 12(1-2): 131-138.
PUB | DOI | WoS | PubMed | Europe PMC
 
[82]
2006 | Journal Article | PUB-ID: 1598225
Morphological changes and proteome response of Corynebacterium glutamicum to a partial depletion of Ftsl
Valbuena N, Letek M, Ramos A, Ayala J, Nakunst D, Kalinowski J, Mateos LM, Gil JA (2006)
MICROBIOLOGY-SGM 152(8): 2491-2503.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[80]
2006 | Journal Article | PUB-ID: 1599402
Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae
Hansmeier N, Chao TC, Kalinowski J, Pühler A, Tauch A (2006)
PROTEOMICS 6(8): 2465-2476.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[78]
2006 | Journal Article | PUB-ID: 1773628 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[77]
2006 | Journal Article | PUB-ID: 1773853 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[76]
2006 | Journal Article | PUB-ID: 1599618
The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032
Hansmeier N, Albersmeier A, Tauch A, Damberg T, Ros R, Anselmetti D, Pühler A, Kalinowski J (2006)
Microbiology 152(4): 923-935.
PUB | DOI | WoS | PubMed | Europe PMC
 
[75]
2006 | Journal Article | PUB-ID: 2405187
The Gene ncgl2918 Encodes a Novel Maleylpyruvate Isomerase That Needs Mycothiol as Cofactor and Links Mycothiol Biosynthesis and Gentisate Assimilation in Corynebacterium glutamicum
Feng J, Che Y, Milse J, Yin Y-J, Liu L, Rückert C, Shen X-H, Qi S-W, Kalinowski J, Liu S-J (2006)
Journal of Biological Chemistry 281(16): 10778-10785.
PUB | DOI | WoS | PubMed | Europe PMC
 
[74]
2006 | Journal Article | PUB-ID: 1895365
Emerging Corynebacterium glutamicum systems biology
Wendisch VF, Bott M, Kalinowski J, Oldiges M, Wiechert W (2006)
Journal of Biotechnology 124(1): 74-92.
PUB | DOI | WoS | PubMed | Europe PMC
 
[73]
2006 | Journal Article | PUB-ID: 1597814 PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[72]
2006 | Journal Article | PUB-ID: 1946381 PUB | DOI | WoS | PubMed | Europe PMC
 
[71]
2006 | Journal Article | PUB-ID: 1599645
The gene ncgl2918 encodes a novel maleylpyruvate isomerase that needs mycothiol as cofactor and links mycothiol biosynthesis and gentisate assimilation in Corynebacterium glutamicum
Feng J, Che YS, Milse J, Yin YJ, Liu L, Ruckert C, Shen XH, Qi SW, Kalinowski J, Liu SJ (2006)
JOURNAL OF BIOLOGICAL CHEMISTRY 281(16): 10778-10785.
PUB | DOI | WoS | PubMed | Europe PMC
 
[70]
2006 | Journal Article | PUB-ID: 1598610
Utilization of soluble starch by a recombinant Corynebacterium glutamicum strain: Growth and lysine production
Seibold G, Auchter M, Berens S, Kalinowski J, Eikmanns BJ (2006)
JOURNAL OF BIOTECHNOLOGY 124(2): 381-391.
PUB | DOI | WoS | PubMed | Europe PMC
 
[69]
2005 | Book Chapter | PUB-ID: 2906740
The Transparent Cell
Heinz D, Bott M, Kalinowski J, Niefind K, Rakors R, Wendisch VF (2005)
In: BIOTECHNOLOGY 2020 – From the Transparent Cell to the Custom-designed Process. European Commision: 8-15.
PUB
 
[68]
2005 | Journal Article | PUB-ID: 1601955
DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum
Silberbach M, Hüser AT, Kalinowski J, Pühler A, Walter B, Kramer R, Burkovski A (2005)
JOURNAL OF BIOTECHNOLOGY 119(4): 357-367.
PUB | DOI | WoS | PubMed | Europe PMC
 
[67]
2005 | Journal Article | PUB-ID: 1603889
Adaptation of Corynebacterium glutamicum to ammonium limitation: A global analysis using transcriptome and proteome techniques
Silberbach M, Schafer M, Hüser AT, Kalinowski J, Pühler A, Kramer R, Burkovski A (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(5): 2391-2402.
PUB | DOI | WoS | PubMed | Europe PMC
 
[66]
2005 | Journal Article | PUB-ID: 1603458
Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genorne-wide transcriptional profiling
Hüser AT, Chassagnole C, Lindley ND, Merkamm M, Guyonvarch A, Elisakova V, Patek M, Kalinowski J, Brune I, Pühler A, Tauch A (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(6): 3255-3268.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[64]
2005 | Journal Article | PUB-ID: 1601771
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction
Rückert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Pühler A, Kalinowski J (2005)
BMC Genomics 6(1): 121.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
[63]
2005 | Journal Article | PUB-ID: 1603821 PUB | DOI | WoS | PubMed | Europe PMC
 
[62]
2005 | Journal Article | PUB-ID: 1602137
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate
Koch DJ, Rückert C, Albersmeier A, Hüser AT, Tauch A, Pühler A, Kalinowski J (2005)
Mol Microbiol 58(2): 480-494.
PUB | DOI | WoS | PubMed | Europe PMC
 
[61]
2005 | Journal Article | PUB-ID: 1603317
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, et al. (2005)
Journal of Bacteriology 187(13): 4671-4682.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[60]
2005 | Journal Article | PUB-ID: 1602017
Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources
Koch DJ, Rückert C, Rey DA, Mix A, Pühler A, Kalinowski J (2005)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 71(10): 6104-6114.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[59]
2005 | Journal Article | PUB-ID: 1602146
Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon
Beckers G, Strosser J, Hildebrandt U, Kalinowski J, Farwick M, Kramer R, Burkovski A (2005)
MOLECULAR MICROBIOLOGY 58(2): 580-595.
PUB | DOI | WoS | PubMed | Europe PMC
 
[58]
2004 | Book Chapter | PUB-ID: 2906741
Die gläserne Zelle
Heinz D, Bott M, Kalinowski J, Niefind K, Takors R, Wendisch VF (2004)
In: BIOTECHNOLOGIE 2020 - Von der gläsernen Zelle zum maßgeschneiderten Prozess. DECHEMA: 6-13.
PUB
 
[57]
2004 | Journal Article | PUB-ID: 1608839 PUB | DOI | WoS | PubMed | Europe PMC
 
[56]
2004 | Journal Article | PUB-ID: 1606270
The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum
Hartmann M, Barsch A, Niehaus K, Pühler A, Tauch A, Kalinowski J (2004)
ARCHIVES OF MICROBIOLOGY 182(4): 299-312.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[54]
2004 | Journal Article | PUB-ID: 1608687
Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula
Küster H, Hohnjec N, Krajinski F, El Yahyaoui F, Manthey K, Gouzy J, Dondrup M, Meyer F, Kalinowski J, Brechenmacher L, van Tuinen D, et al. (2004)
JOURNAL OF BIOTECHNOLOGY 108(2): 95-113.
PUB | DOI | WoS | PubMed | Europe PMC
 
[53]
2004 | Journal Article | PUB-ID: 1773130
Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy
Hansmeier N, Bartels FW, Ros R, Anselmetti D, Tauch A, Pühler A, Kalinowski J (2004)
J Biotechnol 112(1-2): 177-193.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
[52]
2003 | Journal Article | PUB-ID: 1610260
Identification and characterization of the last two unknown genes, dapC and dapF, in the succinylase branch of the L-lysine biosynthesis of Corynebacterium glutamicum
Hartmann M, Tauch A, Eggeling L, Bathe B, Mockel B, Pühler A, Kalinowski J (2003)
J Biotechnol 104(1-3): 199-211.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[51]
2003 | Journal Article | PUB-ID: 1609339
Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source
Hüser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Pühler A, Wiegräbe I, Tauch A (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 269-286.
PUB | DOI | WoS | PubMed | Europe PMC
 
[50]
2003 | Journal Article | PUB-ID: 1609260
EMMA: a platform for consistent storage and efficient analysis of microarray data
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Pühler A, Meyer F (2003)
JOURNAL OF BIOTECHNOLOGY 106(2-3): 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
 
[48]
2003 | Journal Article | PUB-ID: 1610254
Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics
Tauch A, Pühler A, Kalinowski J, Thierbach G (2003)
JOURNAL OF BIOTECHNOLOGY 104(1-3): 27-40.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[47]
2003 | Journal Article | PUB-ID: 1773880
GenDB - an open source genome annotation system for prokaryote genomes
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Pühler A (2003)
Nucleic Acids Research 31(8): 2187-2195.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[46]
2003 | Journal Article | PUB-ID: 1610269 PUB | DOI | WoS | PubMed | Europe PMC
 
[45]
2003 | Journal Article | PUB-ID: 1610274
Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum
McHardy AC, Tauch A, Rückert C, Pühler A, Kalinowski J (2003)
J Biotechnol 104(1-3): 229-240.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[44]
2003 | Journal Article | PUB-ID: 1895035
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, et al. (2003)
Journal of Biotechnology 104(1-3): 5-25.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[42]
2003 | Journal Article | PUB-ID: 1609350
Qualitative and quantitative proteomics by two-dimensional gel electrophoresis, peptide mass fingerprint and a chemically-coded affinity tag (CCAT)
Watt SA, Patschkowski T, Kalinowski J, Niehaus K (2003)
Journal of Biotechnology 106(2-3): 287-300.
PUB | DOI | WoS | PubMed | Europe PMC
 
[41]
2003 | Journal Article | PUB-ID: 1612397 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[40]
2003 | Journal Article | PUB-ID: 1612500
An interferon-gamma-binding protein of novel structure encoded by the fowlpox virus
Puehler F, Schwarz H, Waidner B, Kalinowski J, Kaspers B, Bereswill S, Staeheli P (2003)
JOURNAL OF BIOLOGICAL CHEMISTRY 278(9): 6905-6911.
PUB | DOI | WoS | PubMed | Europe PMC
 
[39]
2002 | Journal Article | PUB-ID: 1614539 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[37]
2002 | Journal Article | PUB-ID: 1615366
PathFinder: reconstruction and dynamic visualization of metabolic pathways
Goesmann A, Haubrock M, Meyer F, Kalinowski J, Giegerich R (2002)
BIOINFORMATICS 18(1): 124-129.
PUB | DOI | WoS | PubMed | Europe PMC
 
[36]
2002 | Journal Article | PUB-ID: 1613598
Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1
Tauch A, Kirchner O, Löffler B, Götker S, Pühler A, Kalinowski J (2002)
CURRENT MICROBIOLOGY 45(5): 362-367.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[35]
2002 | Journal Article | PUB-ID: 1613526
The alanine racemase gene alr is an alternative to antibiotic resistance genes in cloning systems for industrial Corynebacterium glutamicum strains
Tauch A, Götker S, Pühler A, Kalinowski J, Thierbach G (2002)
JOURNAL OF BIOTECHNOLOGY 99(1): 79-91.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[34]
2001 | Journal Article | PUB-ID: 1616804
Relaxed rrn expression and amino acid requirement of a Corynebacterium glutamicum rel mutant defective in (p)ppGpp metabolism
Tauch A, Wehmeier L, Gotker S, Pühler A, Kalinowski J (2001)
FEMS Microbiol Lett 201(1): 53-58.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[33]
2001 | Journal Article | PUB-ID: 1617736
A Corynebacterium glutamicum mutant with a defined deletion within the rpIK gene is impaired in (p)ppGpp accumulation upon amino acid starvation
Wehmeier L, Brockmann-Gretza O, Pisabarro A, Tauch A, Pühler A, Martin JF, Kalinowski J (2001)
Microbiology 147: 691-700.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[32]
2001 | Journal Article | PUB-ID: 1616981
Proteome analysis of Corynebacterium glutamicum
Hermann T, Pfefferle W, Baumann C, Busker E, Schaffer S, Bott M, Sahm H, Dusch N, Kalinowski J, Pühler A, Bendt AK, et al. (2001)
ELECTROPHORESIS 22(9): 1712-1723.
PUB | DOI | WoS | PubMed | Europe PMC
 
[31]
2000 | Journal Article | PUB-ID: 1618501 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[29]
1999 | Journal Article | PUB-ID: 1621156 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[28]
1999 | Journal Article | PUB-ID: 1623329 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[27]
1999 | Journal Article | PUB-ID: 1623284 PUB | WoS | PubMed | Europe PMC | GenBank
 
[26]
1999 | Journal Article | PUB-ID: 1621449
Pantothenate production in Escherichia coli K12 by enhanced expression of the panE gene encoding ketopantoate reductase
Elischewski F, Pühler A, Kalinowski J (1999)
JOURNAL OF BIOTECHNOLOGY 75(2-3): 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
[25]
1998 | Journal Article | PUB-ID: 1624721 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[24]
1998 | Journal Article | PUB-ID: 1625135
The role of the Corynebacterium glutamicum rel gene in (p)ppGpp metabolism
Wehmeier L, Schafer A, Burkovski A, Kramer R, Mechold U, Malke H, Pühler A, Kalinowski J (1998)
Microbiology 144(7): 1853-1862.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[23]
1998 | Journal Article | PUB-ID: 1626331
Versatile low-copy-number plasmids for temperature-inducible overexpression of bacterial genes in Escherichia coli
Götting C, Thierbach G, Pühler A, Kalinowski J (1998)
BIOTECHNIQUES 24(3): 362-+.
PUB | WoS | PubMed | Europe PMC
 
[22]
1998 | Journal Article | PUB-ID: 1904807
Pyruvate carboxylase from Corynebacterium glutamicum: characterization, expression and inactivation of the pyc gene.
Peters-Wendisch P, Kreutzer C, Kalinowski J, Pátek M, Sahm H, Eikmanns BJ (1998)
Microbiology-Sgm 144(4): 915-927.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[21]
1998 | Journal Article | PUB-ID: 1625704
Isoleucine uptake in Corynebacterium glutamicum ATCC 13032 is directed by the brnQ gene product
Tauch A, Hermann T, Burkovski A, Kramer R, Pühler A, Kalinowski J (1998)
ARCHIVES OF MICROBIOLOGY 169(4): 303-312.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[20]
1997 | Journal Article | PUB-ID: 1626635 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[19]
1997 | Journal Article | PUB-ID: 1637471
A Corynebacterium glutamicum gene conferring multidrug resistance in the heterologous host Escherichia coli
Jäger W, Kalinowski J, Pühler A (1997)
J Bacteriol 179(7): 2449-2451.
PUB | WoS | PubMed | Europe PMC | GenBank
 
[18]
1996 | Journal Article | PUB-ID: 1638621
A Corynebacterium glutamicum gene encoding a two-domain protein similar to biotin carboxylases and biotin-carboxyl-carrier proteins
Jäger W, Peters-Wendisch P, Kalinowski J, Pühler A (1996)
Arch Microbiol 166(2): 76-82.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[17]
1996 | Journal Article | PUB-ID: 1637976
Construction of L-lysine-overproducing strains of Brevibacterium lactofermentum by targeted disruption of the hom and thrB genes
Fernandez-Gonzalez C, Gil JA, Mateos LM, Schwarzer A, Schafer A, Kalinowski J, Pühler A, Martin JF (1996)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 46(5-6): 554-558.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
1996 | Journal Article | PUB-ID: 1638415
Integration of narrow-host-range vectors from Escherichia coli into the genomes of amino acid-producing corynebacteria after intergeneric conjugation
Mateos LM, Schäfer A, Kalinowski J, Martin JF, Pühler A (1996)
JOURNAL OF BACTERIOLOGY 178(19): 5768-5775.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
1996 | Journal Article | PUB-ID: 1638387
A physical and genetic map of the Corynebacterium glutamicum ATCC 13032 chromosome
Bathe B, Kalinowski J, Pühler A (1996)
MOLECULAR & GENERAL GENETICS 252(3): 255-265.
PUB | WoS | PubMed | Europe PMC
 
[14]
1995 | Journal Article | PUB-ID: 1639972 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[12]
1995 | Journal Article | PUB-ID: 1641658 PUB | WoS | PubMed | Europe PMC
 
[11]
1994 | Journal Article | PUB-ID: 1643046 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
 
[9]
1994 | Journal Article | PUB-ID: 1642272
Corynebacterium glutamicum DNA is subjected to methylation-restriction in Escherichia coli
Tauch A, Kirchner O, Wehmeier L, Kalinowski J, Pühler A (1994)
FEMS MICROBIOLOGY LETTERS 123(3): 343-347.
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
1994 | Journal Article | PUB-ID: 1644393
Increased fertility of Corynebacterium glutamicum recipients in intergeneric matings with Escherichia coli after stress exposure
Schäfer A, Kalinowski J, Pühler A (1994)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 60(2): 756-759.
PUB | WoS | PubMed | Europe PMC
 
[7]
1991 | Journal Article | PUB-ID: 1649702
A functionally split pathway for lysine synthesis in Corynebacterium glutamicium
Schrumpf B, Schwarzer A, Kalinowski J, Pühler A, Eggeling L, Sahm H (1991)
Journal of Bacteriology 173(14): 4510-4516.
PUB | WoS | PubMed | Europe PMC
 
[6]
1991 | Journal Article | PUB-ID: 1648831
Molecular analysis of the Corynebacterium glutamicum lysl gene involved in lysine uptake
Seep-Feldhaus AH, Kalinowski J, Pühler A (1991)
MOLECULAR MICROBIOLOGY 5(12): 2995-3005.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
1991 | Journal Article | PUB-ID: 1649978
Genetic and biochemical analysis of the aspartokinase from Corynebacterium glutamicum
Kalinowski J, Cremer J, Bachmann B, Eggeling L, Sahm H, Pühler A (1991)
MOLECULAR MICROBIOLOGY 5(5): 1197-1204.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[4]
1990 | Journal Article | PUB-ID: 1652001
Cloning of a DNA fragment from Corynebacterium glutamicum conferring aminoethyl cysteine resistance and feedback resistance to aspartokinase.
Thierbach G, Kalinowski J, Bachmann B, Pühler A (1990)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 32(4): 443-448.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
1990 | Journal Article | PUB-ID: 1651883
High-frequency conjugal plasmid transfer from gram-negative Escherichia coli to various gram-positive coryneform bacteria.
Schäfer A, Kalinowski J, Simon R, Seep-Feldhaus AH, Pühler A (1990)
JOURNAL OF BACTERIOLOGY 172(3): 1663-1666.
PUB | DOI | WoS | PubMed | Europe PMC
 
[2]
1990 | Journal Article | PUB-ID: 1629917 PUB | WoS | PubMed | Europe PMC | GenBank
 
[1]
1989 | Journal Article | PUB-ID: 1652907 PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 

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