Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin

Busche T, Novakova R, Al'Dilaimi A, Homerova D, Feckova L, Rezuchova B, Mingyar E, Csolleiova D, Bekeova C, Winkler A, Sevcikova B, et al. (2018)
Genome Announcements 6(9): e00103-18.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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URN
urn:nbn:de:0070-pub-29189692
Autor*in
Busche, TobiasUniBi; Novakova, Renata; Al'Dilaimi, Arwa; Homerova, Dagmar; Feckova, Lubomira; Rezuchova, Bronislava; Mingyar, Erik; Csolleiova, Dominika; Bekeova, Carmen; Winkler, AnikaUniBi; Sevcikova, Beatrica; Kalinowski, JörnUniBi
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Einrichtung
Centrum für Biotechnologie
Abstract / Bemerkung
Streptomyces lavendulae subsp. lavendulae CCM 3239 produces the angucycline antibiotic auricin and was thought to be the type strain of Streptomyces aureofaciens. We report the complete genome sequence of this strain, which consists of a linear chromosome and the linear plasmid pSA3239, and demonstrate it to be S. lavendulae subsp. lavendulae.
Erscheinungsjahr
2018
Zeitschriftentitel
Genome Announcements
Band
6
Ausgabe
9
Art.-Nr.
e00103-18
Urheberrecht / Lizenzen
Creative Commons Namensnennung 4.0 International Public License (CC-BY 4.0)
ISSN
2169-8287
eISSN
2169-8287
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Open-Access-Publikationskosten wurden durch die Deutsche Forschungsgemeinschaft und die Universität Bielefeld gefördert.
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https://pub.uni-bielefeld.de/record/2918969

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Busche T, Novakova R, Al'Dilaimi A, et al. Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin. Genome Announcements. 2018;6(9): e00103-18.
Busche, T., Novakova, R., Al'Dilaimi, A., Homerova, D., Feckova, L., Rezuchova, B., Mingyar, E., et al. (2018). Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin. Genome Announcements, 6(9), e00103-18. doi:10.1128/genomea.00103-18
Busche, Tobias, Novakova, Renata, Al'Dilaimi, Arwa, Homerova, Dagmar, Feckova, Lubomira, Rezuchova, Bronislava, Mingyar, Erik, et al. 2018. “Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin”. Genome Announcements 6 (9): e00103-18.
Busche, T., Novakova, R., Al'Dilaimi, A., Homerova, D., Feckova, L., Rezuchova, B., Mingyar, E., Csolleiova, D., Bekeova, C., Winkler, A., et al. (2018). Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin. Genome Announcements 6:e00103-18.
Busche, T., et al., 2018. Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin. Genome Announcements, 6(9): e00103-18.
T. Busche, et al., “Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin”, Genome Announcements, vol. 6, 2018, : e00103-18.
Busche, T., Novakova, R., Al'Dilaimi, A., Homerova, D., Feckova, L., Rezuchova, B., Mingyar, E., Csolleiova, D., Bekeova, C., Winkler, A., Sevcikova, B., Kalinowski, J., Kormanec, J., Rückert, C.: Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin. Genome Announcements. 6, : e00103-18 (2018).
Busche, Tobias, Novakova, Renata, Al'Dilaimi, Arwa, Homerova, Dagmar, Feckova, Lubomira, Rezuchova, Bronislava, Mingyar, Erik, Csolleiova, Dominika, Bekeova, Carmen, Winkler, Anika, Sevcikova, Beatrica, Kalinowski, Jörn, Kormanec, Jan, and Rückert, Christian. “Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin”. Genome Announcements 6.9 (2018): e00103-18.
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12 References

Daten bereitgestellt von Europe PubMed Central.

Prokka: rapid prokaryotic genome annotation.
Seemann T., Bioinformatics 30(14), 2014
PMID: 24642063
Intriguing properties of the angucycline antibiotic auricin and complex regulation of its biosynthesis.
Kormanec J, Novakova R, Mingyar E, Feckova L., Appl. Microbiol. Biotechnol. 98(1), 2013
PMID: 24265028
Recent advances in understanding Streptomyces.
Chater KF., F1000Res 5(), 2016
PMID: 27990276
A method for the identification of promoters recognized by RNA polymerase containing a particular sigma factor: cloning of a developmentally regulated promoter and corresponding gene directed by the Streptomyces aureofaciens sigma factor RpoZ.
Novakova R, Sevcikova B, Kormanec J., Gene 208(1), 1998
PMID: 9479043
Disruption of a sigma factor gene, sigF, affects an intermediate stage of spore pigment production in Streptomyces aureofaciens.
Rezuchova B, Barak I, Kormanec J., FEMS Microbiol. Lett. 153(2), 1997
PMID: 9271865
antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification.
Blin K, Wolf T, Chevrette MG, Lu X, Schwalen CJ, Kautsar SA, Suarez Duran HG, de Los Santos ELC, Kim HU, Nave M, Dickschat JS, Mitchell DA, Shelest E, Breitling R, Takano E, Lee SY, Weber T, Medema MH., Nucleic Acids Res. 45(W1), 2017
PMID: 28460038
Differential expression of two sporulation specific sigma factors of Streptomyces aureofaciens correlates with the developmental stage.
Kormanec J, Homerova D, Potuckova L, Novakova R, Rezuchova B., Gene 181(1-2), 1996
PMID: 8973303
Four genes in Streptomyces aureofaciens containing a domain characteristic of principal sigma factors.
Kormanec J, Farkasovsky M, Potuckova L., Gene 122(1), 1992
PMID: 1452038
The Streptomyces aureofaciens homologue of the whiB gene is essential for sporulation; its expression correlates with the developmental stage.
Kormanec J, Sevcikova B, Sprusansky O, Benada O, Kofronova O, Novakova R, Rezuchova B, Potuckova L, Homerova D., Folia Microbiol. (Praha) 43(6), 1998
PMID: 10069009
Characterization of the polyketide spore pigment cluster whiESa in Streptomyces aureofaciens CCM3239.
Novakova R, Bistakova J, Kormanec J., Arch. Microbiol. 182(5), 2004
PMID: 15365693
Differential expression of principal sigma factor homologues of Streptomyces aureofaciens correlates with the developmental stage.
Kormanec J, Farkasovsky M., Nucleic Acids Res. 21(16), 1993
PMID: 8367281
Consed: a graphical editor for next-generation sequencing.
Gordon D, Green P., Bioinformatics 29(22), 2013
PMID: 23995391
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