FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum
Haenssler E, Mueller T, Jessberger N, Voelzke A, Plassmeier J, Kalinowski J, Kraemer R, Burkovski A (2007)
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 76(3): 625-632.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Haenssler, Eva;
Mueller, Tim;
Jessberger, Nadja;
Voelzke, Anja;
Plassmeier, Jens;
Kalinowski, JörnUniBi;
Kraemer, Reinhard;
Burkovski, Andreas
Einrichtung
Abstract / Bemerkung
With the publication of the Corynebacterium glutamicum genome sequence, a global characterization of genes controlled by functionally uncharacterized transcriptional regulators became possible. We used DNA microarrays in combination with gel retardation experiments to study gene regulation by FarR, a HutC/FarR-type regulator of the GntR family. Based on our results, FarR seems to be involved in the regulation of amino acid biosynthesis in C. glutamicum. Especially, transcript levels of the arg cluster and the gdh gene are influenced by deletion of farR.
Stichworte
arginine;
glutamate dehydrogenase;
Corynebacterium
Erscheinungsjahr
2007
Zeitschriftentitel
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
Band
76
Ausgabe
3
Seite(n)
625-632
ISSN
0175-7598
eISSN
1432-0614
Page URI
https://pub.uni-bielefeld.de/record/1632884
Zitieren
Haenssler E, Mueller T, Jessberger N, et al. FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. 2007;76(3):625-632.
Haenssler, E., Mueller, T., Jessberger, N., Voelzke, A., Plassmeier, J., Kalinowski, J., Kraemer, R., et al. (2007). FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 76(3), 625-632. https://doi.org/10.1007/s00253-007-0929-5
Haenssler, Eva, Mueller, Tim, Jessberger, Nadja, Voelzke, Anja, Plassmeier, Jens, Kalinowski, Jörn, Kraemer, Reinhard, and Burkovski, Andreas. 2007. “FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 76 (3): 625-632.
Haenssler, E., Mueller, T., Jessberger, N., Voelzke, A., Plassmeier, J., Kalinowski, J., Kraemer, R., and Burkovski, A. (2007). FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 76, 625-632.
Haenssler, E., et al., 2007. FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 76(3), p 625-632.
E. Haenssler, et al., “FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum”, APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, vol. 76, 2007, pp. 625-632.
Haenssler, E., Mueller, T., Jessberger, N., Voelzke, A., Plassmeier, J., Kalinowski, J., Kraemer, R., Burkovski, A.: FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. 76, 625-632 (2007).
Haenssler, Eva, Mueller, Tim, Jessberger, Nadja, Voelzke, Anja, Plassmeier, Jens, Kalinowski, Jörn, Kraemer, Reinhard, and Burkovski, Andreas. “FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum”. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY 76.3 (2007): 625-632.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
13 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Breeding of Methanol-Tolerant Methylobacterium extorquens AM1 by Atmospheric and Room Temperature Plasma Mutagenesis Combined With Adaptive Laboratory Evolution.
Cui LY, Wang SS, Guan CG, Liang WF, Xue ZL, Zhang C, Xing XH., Biotechnol J 13(6), 2018
PMID: 29729127
Cui LY, Wang SS, Guan CG, Liang WF, Xue ZL, Zhang C, Xing XH., Biotechnol J 13(6), 2018
PMID: 29729127
Transcriptional regulator GntR of Brucella abortus regulates cytotoxicity, induces the secretion of inflammatory cytokines and affects expression of the type IV secretion system and quorum sensing system in macrophages.
Li Z, Wang S, Zhang H, Zhang J, Xi L, Zhang J, Chen C., World J Microbiol Biotechnol 33(3), 2017
PMID: 28243986
Li Z, Wang S, Zhang H, Zhang J, Xi L, Zhang J, Chen C., World J Microbiol Biotechnol 33(3), 2017
PMID: 28243986
Implication of ornithine acetyltransferase activity on l-ornithine production in Corynebacterium glutamicum.
Hao N, Mu J, Hu N, Xu S, Shen P, Yan M, Li Y, Xu L., Biotechnol Appl Biochem 63(1), 2016
PMID: 25630515
Hao N, Mu J, Hu N, Xu S, Shen P, Yan M, Li Y, Xu L., Biotechnol Appl Biochem 63(1), 2016
PMID: 25630515
Controlling the transcription levels of argGH redistributed L-arginine metabolic flux in N-acetylglutamate kinase and ArgR-deregulated Corynebacterium crenatum.
Zhao Q, Luo Y, Dou W, Zhang X, Zhang X, Zhang W, Xu M, Geng Y, Rao Z, Xu Z., J Ind Microbiol Biotechnol 43(1), 2016
PMID: 26521658
Zhao Q, Luo Y, Dou W, Zhang X, Zhang X, Zhang W, Xu M, Geng Y, Rao Z, Xu Z., J Ind Microbiol Biotechnol 43(1), 2016
PMID: 26521658
Metabolic engineering of Corynebacterium glutamicum for L-arginine production.
Park SH, Kim HU, Kim TY, Park JS, Kim SS, Lee SY., Nat Commun 5(), 2014
PMID: 25091334
Park SH, Kim HU, Kim TY, Park JS, Kim SS, Lee SY., Nat Commun 5(), 2014
PMID: 25091334
Metabolic engineering of microorganisms for the production of L-arginine and its derivatives.
Shin JH, Lee SY., Microb Cell Fact 13(), 2014
PMID: 25467280
Shin JH, Lee SY., Microb Cell Fact 13(), 2014
PMID: 25467280
The role of ARGR repressor regulation on L-arginine production in Corynebacterium crenatum.
Xu M, Rao Z, Dou W, Xu Z., Appl Biochem Biotechnol 170(3), 2013
PMID: 23564434
Xu M, Rao Z, Dou W, Xu Z., Appl Biochem Biotechnol 170(3), 2013
PMID: 23564434
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032.
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24138339
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24138339
Heterologous and homologous expression of the arginine biosynthetic argC~H cluster from Corynebacterium crenatum for improvement of (L) -arginine production.
Xu M, Rao Z, Yang J, Xia H, Dou W, Jin J, Xu Z., J Ind Microbiol Biotechnol 39(3), 2012
PMID: 22009057
Xu M, Rao Z, Yang J, Xia H, Dou W, Jin J, Xu Z., J Ind Microbiol Biotechnol 39(3), 2012
PMID: 22009057
Proline reduces the binding of transcriptional regulator ArgR to upstream of argB in Corynebacterium glutamicum.
Lee SY, Shin HS, Park JS, Kim YH, Min J., Appl Microbiol Biotechnol 86(1), 2010
PMID: 19798496
Lee SY, Shin HS, Park JS, Kim YH, Min J., Appl Microbiol Biotechnol 86(1), 2010
PMID: 19798496
Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network.
Schröder J, Tauch A., FEMS Microbiol Rev 34(5), 2010
PMID: 20491930
Schröder J, Tauch A., FEMS Microbiol Rev 34(5), 2010
PMID: 20491930
A phylogenomic analysis of bacterial helix-turn-helix transcription factors.
Santos CL, Tavares F, Thioulouse J, Normand P., FEMS Microbiol Rev 33(2), 2009
PMID: 19076237
Santos CL, Tavares F, Thioulouse J, Normand P., FEMS Microbiol Rev 33(2), 2009
PMID: 19076237
A game with many players: control of gdh transcription in Corynebacterium glutamicum.
Hänssler E, Müller T, Palumbo K, Patek M, Brocker M, Krämer R, Burkovski A., J Biotechnol 142(2), 2009
PMID: 19394370
Hänssler E, Müller T, Palumbo K, Patek M, Brocker M, Krämer R, Burkovski A., J Biotechnol 142(2), 2009
PMID: 19394370
30 References
Daten bereitgestellt von Europe PubMed Central.
HutC/FarR-like bacterial transcription factors of the GntR family contain a small molecule-binding domain of the chorismate lyase fold.
Aravind L, Anantharaman V., FEMS Microbiol. Lett. 222(1), 2003
PMID: 12757941
Aravind L, Anantharaman V., FEMS Microbiol. Lett. 222(1), 2003
PMID: 12757941
Molecular analysis of the Corynebacterium glutamicum gdh gene encoding glutamate dehydrogenase.
Bormann ER, Eikmanns BJ, Sahm H., Mol. Microbiol. 6(3), 1992
PMID: 1552846
Bormann ER, Eikmanns BJ, Sahm H., Mol. Microbiol. 6(3), 1992
PMID: 1552846
The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences.
Brune I, Brinkrolf K, Kalinowski J, Puhler A, Tauch A., BMC Genomics 6(), 2005
PMID: 15938759
Brune I, Brinkrolf K, Kalinowski J, Puhler A, Tauch A., BMC Genomics 6(), 2005
PMID: 15938759
J, Mol Gen Genet 220(), 1990
EMMA: a platform for consistent storage and efficient analysis of microarray data.
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Puhler A, Meyer F., J. Biotechnol. 106(2-3), 2003
PMID: 14651856
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Puhler A, Meyer F., J. Biotechnol. 106(2-3), 2003
PMID: 14651856
Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants.
Grant SG, Jessee J, Bloom FR, Hanahan D., Proc. Natl. Acad. Sci. U.S.A. 87(12), 1990
PMID: 2162051
Grant SG, Jessee J, Bloom FR, Hanahan D., Proc. Natl. Acad. Sci. U.S.A. 87(12), 1990
PMID: 2162051
Development of a Corynebacterium glutamicum DNA microarray and validation by genome-wide expression profiling during growth with propionate as carbon source.
Huser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Puhler A, Wiegrabe I, Tauch A., J. Biotechnol. 106(2-3), 2003
PMID: 14651867
Huser AT, Becker A, Brune I, Dondrup M, Kalinowski J, Plassmeier J, Puhler A, Wiegrabe I, Tauch A., J. Biotechnol. 106(2-3), 2003
PMID: 14651867
The Corynebacterium glutamicum genome: features and impacts on biotechnological processes.
Ikeda M, Nakagawa S., Appl. Microbiol. Biotechnol. 62(2-3), 2003
PMID: 12743753
Ikeda M, Nakagawa S., Appl. Microbiol. Biotechnol. 62(2-3), 2003
PMID: 12743753
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
Isoleucine synthesis in Corynebacterium glutamicum: molecular analysis of the ilvB-ilvN-ilvC operon.
Keilhauer C, Eggeling L, Sahm H., J. Bacteriol. 175(17), 1993
PMID: 8366043
Keilhauer C, Eggeling L, Sahm H., J. Bacteriol. 175(17), 1993
PMID: 8366043
S, J Gen Appl Microbiol 3(), 1957
M, Methods Enzymol 10(), 1977
Biotechnological production of amino acids and derivatives: current status and prospects.
Leuchtenberger W, Huthmacher K, Drauz K., Appl. Microbiol. Biotechnol. 69(1), 2005
PMID: 16195792
Leuchtenberger W, Huthmacher K, Drauz K., Appl. Microbiol. Biotechnol. 69(1), 2005
PMID: 16195792
JH, 1972
Molecular analysis of the cytochrome bc1-aa3 branch of the Corynebacterium glutamicum respiratory chain containing an unusual diheme cytochrome c1.
Niebisch A, Bott M., Arch. Microbiol. 175(4), 2001
PMID: 11382224
Niebisch A, Bott M., Arch. Microbiol. 175(4), 2001
PMID: 11382224
AUTHOR UNKNOWN, 0
Genomewide expression analysis in amino acid-producing bacteria using DNA microarrays.
Polen T, Wendisch VF., Appl. Biochem. Biotechnol. 118(1-3), 2004
PMID: 15304751
Polen T, Wendisch VF., Appl. Biochem. Biotechnol. 118(1-3), 2004
PMID: 15304751
Identification of a fatty acyl responsive regulator (FarR) in Escherichia coli.
Quail MA, Dempsey CE, Guest JR., FEBS Lett. 356(2-3), 1994
PMID: 7805834
Quail MA, Dempsey CE, Guest JR., FEBS Lett. 356(2-3), 1994
PMID: 7805834
S, J Biol Chem 227(), 2002
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction.
Ruckert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Puhler A, Kalinowski J., BMC Genomics 6(), 2005
PMID: 16159395
Ruckert C, Koch DJ, Rey DA, Albersmeier A, Mormann S, Puhler A, Kalinowski J., BMC Genomics 6(), 2005
PMID: 16159395
Genes and enzymes of the acetyl cycle of arginine biosynthesis in Corynebacterium glutamicum: enzyme evolution in the early steps of the arginine pathway.
Sakanyan V, Petrosyan P, Lecocq M, Boyen A, Legrain C, Demarez M, Hallet JN, Glansdorff N., Microbiology (Reading, Engl.) 142 ( Pt 1)(), 1996
PMID: 8581175
Sakanyan V, Petrosyan P, Lecocq M, Boyen A, Legrain C, Demarez M, Hallet JN, Glansdorff N., Microbiology (Reading, Engl.) 142 ( Pt 1)(), 1996
PMID: 8581175
J, 1989
Phosphotransferase-mediated transport of the osmolyte 2-O-alpha-mannosyl-D-glycerate in Escherichia coli occurs by the product of the mngA (hrsA) gene and is regulated by the mngR (farR) gene product acting as repressor.
Sampaio MM, Chevance F, Dippel R, Eppler T, Schlegel A, Boos W, Lu YJ, Rock CO., J. Biol. Chem. 279(7), 2003
PMID: 14645248
Sampaio MM, Chevance F, Dippel R, Eppler T, Schlegel A, Boos W, Lu YJ, Rock CO., J. Biol. Chem. 279(7), 2003
PMID: 14645248
Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum.
Schafer A, Tauch A, Jager W, Kalinowski J, Thierbach G, Puhler A., Gene 145(1), 1994
PMID: 8045426
Schafer A, Tauch A, Jager W, Kalinowski J, Thierbach G, Puhler A., Gene 145(1), 1994
PMID: 8045426
DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum.
Silberbach M, Huser A, Kalinowski J, Puhler A, Walter B, Kramer R, Burkovski A., J. Biotechnol. 119(4), 2005
PMID: 15935503
Silberbach M, Huser A, Kalinowski J, Puhler A, Walter B, Kramer R, Burkovski A., J. Biotechnol. 119(4), 2005
PMID: 15935503
Efficient electrotransformation of corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1.
Tauch A, Kirchner O, Loffler B, Gotker S, Puhler A, Kalinowski J., Curr. Microbiol. 45(5), 2002
PMID: 12232668
Tauch A, Kirchner O, Loffler B, Gotker S, Puhler A, Kalinowski J., Curr. Microbiol. 45(5), 2002
PMID: 12232668
S, J Bacteriol 79(), 1960
The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.
Vieira J, Messing J., Gene 19(3), 1982
PMID: 6295879
Vieira J, Messing J., Gene 19(3), 1982
PMID: 6295879
R, 2000
Genome-wide expression analysis in Corynebacterium glutamicum using DNA microarrays.
Wendisch VF., J. Biotechnol. 104(1-3), 2003
PMID: 12948645
Wendisch VF., J. Biotechnol. 104(1-3), 2003
PMID: 12948645
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 17483938
PubMed | Europe PMC
Suchen in