Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana
Al-Dilaimi A, Bednarz H, Lömker A, Niehaus K, Kalinowski J, Rückert C (2015)
International journal of systematic and evolutionary microbiology 65(Pt 1): 177-182.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Abstract / Bemerkung
: A corynebacterium, designated AJ 3170(T), was isolated in the eighties from putrefied bananas. Since then, no further updates concerning the strain description or phylogenetic classification of this species were made. However, phylogenetic analysis of this strain using 16S rRNA and in silico DNA-DNA hybridization confirms the membership to the genus Corynebacterium and clusters AJ 3170(T) with Corynebacterium variabile DSM 44702(T), Corynebacterium terpenotabidum IFO 14764(T) and Corynebacterium nuruki S6-4(T) in one subgroup. Furthermore, a combination of enzymatic, chemical, and morphological characterization technics was applied to describe the strain AJ 3170(T). The strain grows well at pH 6-10 and at 30-41 °C. The predominant major fatty acids were C16:0 (42.15 %), C18:1 ω9c (41.6 %) and C18:0 10-methyl (TBSA) (8.56 %). Cell wall and whole-cell sugar composition could be determined. On the basis of phenotypic, chemotaxonomic and phylogenetic characterization, it is proposed that the strain AJ 3170(T) represents a novel species, for which the name Corynebacterium glyciniphilum sp. nov. is proposed. The type strain is AJ 3170(T) (=DSM 45795(T) =ATCC 21341(T)).
Erscheinungsjahr
2015
Zeitschriftentitel
International journal of systematic and evolutionary microbiology
Band
65
Ausgabe
Pt 1
Seite(n)
177-182
ISSN
1466-5034
Page URI
https://pub.uni-bielefeld.de/record/2700185
Zitieren
Al-Dilaimi A, Bednarz H, Lömker A, Niehaus K, Kalinowski J, Rückert C. Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana. International journal of systematic and evolutionary microbiology. 2015;65(Pt 1):177-182.
Al-Dilaimi, A., Bednarz, H., Lömker, A., Niehaus, K., Kalinowski, J., & Rückert, C. (2015). Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana. International journal of systematic and evolutionary microbiology, 65(Pt 1), 177-182. doi:10.1099/ijs.0.065102-0
Al-Dilaimi, Arwa, Bednarz, Hanna, Lömker, Alexander, Niehaus, Karsten, Kalinowski, Jörn, and Rückert, Christian. 2015. “Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana”. International journal of systematic and evolutionary microbiology 65 (Pt 1): 177-182.
Al-Dilaimi, A., Bednarz, H., Lömker, A., Niehaus, K., Kalinowski, J., and Rückert, C. (2015). Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana. International journal of systematic and evolutionary microbiology 65, 177-182.
Al-Dilaimi, A., et al., 2015. Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana. International journal of systematic and evolutionary microbiology, 65(Pt 1), p 177-182.
A. Al-Dilaimi, et al., “Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana”, International journal of systematic and evolutionary microbiology, vol. 65, 2015, pp. 177-182.
Al-Dilaimi, A., Bednarz, H., Lömker, A., Niehaus, K., Kalinowski, J., Rückert, C.: Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana. International journal of systematic and evolutionary microbiology. 65, 177-182 (2015).
Al-Dilaimi, Arwa, Bednarz, Hanna, Lömker, Alexander, Niehaus, Karsten, Kalinowski, Jörn, and Rückert, Christian. “Revisiting Corynebacterium glyciniphilum (ex Kubota et al. 1972) sp. nov., nom. rev., isolated from putrefied banana”. International journal of systematic and evolutionary microbiology 65.Pt 1 (2015): 177-182.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
UNIPROT
3270 Einträge gefunden, die diesen Artikel zitieren von denen 10 angezeigt werden
Transcriptional regulator, PadR-family (UNIPROT: X5DT80)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Translation initiation factor IF-1 (UNIPROT: X5DPM0)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Dihydrolipoyl dehydrogenase (UNIPROT: X5E8P1)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Uncharacterized protein (UNIPROT: X5DML0)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Uncharacterized protein (UNIPROT: X5DQ23)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Uncharacterized protein (UNIPROT: X5E8B2)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Uncharacterized protein (UNIPROT: X5E9Z5)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Uncharacterized protein (UNIPROT: X5DVT0)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Uncharacterized protein (UNIPROT: X5ECI9)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Glutamyl-tRNA reductase (UNIPROT: X5DP67)
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
Organism: Corynebacterium glyciniphilum AJ 3170
Download in FASTA format
EMBL
2 Einträge gefunden, die diesen Artikel zitieren
Corynebacterium glyciniphilum AJ 3170, complete genome. (EMBL: CP006842)
Sequence length: 3509786
Download in FASTA format
Sequence length: 3509786
Download in FASTA format
2 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Honeydew-associated microbes elicit defense responses against brown planthopper in rice.
Wari D, Kabir MA, Mujiono K, Hojo Y, Shinya T, Tani A, Nakatani H, Galis I., J Exp Bot 70(5), 2019
PMID: 30715410
Wari D, Kabir MA, Mujiono K, Hojo Y, Shinya T, Tani A, Nakatani H, Galis I., J Exp Bot 70(5), 2019
PMID: 30715410
Complete Genome Sequence of the Type Strain Corynebacterium epidermidicanis DSM 45586, Isolated from the Skin of a Dog Suffering from Pruritus.
Rückert C, Eimer J, Winkler A, Tauch A., Genome Announc 3(4), 2015
PMID: 26294641
Rückert C, Eimer J, Winkler A, Tauch A., Genome Announc 3(4), 2015
PMID: 26294641
26 References
Daten bereitgestellt von Europe PubMed Central.
Barksdale, Microbiol. Mol. Biol. Rev. 34(4), 1970
Corynebacterium maris sp. nov., a marine bacterium isolated from the mucus of the coral Fungia granulosa.
Ben-Dov E, Ben Yosef DZ, Pavlov V, Kushmaro A., Int. J. Syst. Evol. Microbiol. 59(Pt 10), 2009
PMID: 19622641
Ben-Dov E, Ben Yosef DZ, Pavlov V, Kushmaro A., Int. J. Syst. Evol. Microbiol. 59(Pt 10), 2009
PMID: 19622641
AUTHOR UNKNOWN, BERGEYS MANUAL OF SYSTEMATIC BACTERIOLOGY 5(), 2012
Weighted neighbor joining: a likelihood-based approach to distance-based phylogeny reconstruction.
Bruno WJ, Socci ND, Halpern AL., Mol. Biol. Evol. 17(1), 2000
PMID: 10666718
Bruno WJ, Socci ND, Halpern AL., Mol. Biol. Evol. 17(1), 2000
PMID: 10666718
Ribosomal Database Project: data and tools for high throughput rRNA analysis.
Cole JR, Wang Q, Fish JA, Chai B, McGarrell DM, Sun Y, Brown CT, Porras-Alfaro A, Kuske CR, Tiedje JM., Nucleic Acids Res. 42(Database issue), 2013
PMID: 24288368
Cole JR, Wang Q, Fish JA, Chai B, McGarrell DM, Sun Y, Brown CT, Porras-Alfaro A, Kuske CR, Tiedje JM., Nucleic Acids Res. 42(Database issue), 2013
PMID: 24288368
Laboratory guidelines for the diagnosis of infections caused by Corynebacterium diphtheriae and C. ulcerans. World Health Organization.
Efstratiou A, George RC., Commun Dis Public Health 2(4), 1999
PMID: 10598381
Efstratiou A, George RC., Commun Dis Public Health 2(4), 1999
PMID: 10598381
Corynebacterium efficiens sp. nov., a glutamic-acid-producing species from soil and vegetables.
Fudou R, Jojima Y, Seto A, Yamada K, Kimura E, Nakamatsu T, Hiraishi A, Yamanaka S., Int. J. Syst. Evol. Microbiol. 52(Pt 4), 2002
PMID: 12148616
Fudou R, Jojima Y, Seto A, Yamada K, Kimura E, Nakamatsu T, Hiraishi A, Yamanaka S., Int. J. Syst. Evol. Microbiol. 52(Pt 4), 2002
PMID: 12148616
AUTHOR UNKNOWN, Can. J. Microbiol. 42(), 1996
AUTHOR UNKNOWN, Syst. Appl. Microbiol. 17(), 1994
AUTHOR UNKNOWN, Agric. Biol. Chem. 49(), 1985
AUTHOR UNKNOWN, J FERMENT BIOENG 67(), 1989
AUTHOR UNKNOWN, J GEN APPL MICROBIOL 18(), 1972
Genome sequence-based species delimitation with confidence intervals and improved distance functions.
Meier-Kolthoff JP, Auch AF, Klenk HP, Goker M., BMC Bioinformatics 14(), 2013
PMID: 23432962
Meier-Kolthoff JP, Auch AF, Klenk HP, Goker M., BMC Bioinformatics 14(), 2013
PMID: 23432962
Single derivatization method for routine analysis of bacterial whole-cell fatty acid methyl esters, including hydroxy acids.
Miller LT., J. Clin. Microbiol. 16(3), 1982
PMID: 7130373
Miller LT., J. Clin. Microbiol. 16(3), 1982
PMID: 7130373
AUTHOR UNKNOWN, Stand Genomic Sci 9(), 2014
Schleifer, Microbiol. Mol. Biol. Rev. 36(4), 1972
Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation.
Schroder J, Maus I, Trost E, Tauch A., BMC Genomics 12(), 2011
PMID: 22053731
Schroder J, Maus I, Trost E, Tauch A., BMC Genomics 12(), 2011
PMID: 22053731
AUTHOR UNKNOWN, METHODS MICROBIOL 38(), 2011
Corynebacterium nuruki sp. nov., isolated from an alcohol fermentation starter.
Shin NR, Jung MJ, Kim MS, Roh SW, Nam YD, Bae JW., Int. J. Syst. Evol. Microbiol. 61(Pt 10), 2010
PMID: 21075904
Shin NR, Jung MJ, Kim MS, Roh SW, Nam YD, Bae JW., Int. J. Syst. Evol. Microbiol. 61(Pt 10), 2010
PMID: 21075904
Genome sequence of Corynebacterium nuruki S6-4 T, isolated from alcohol fermentation starter.
Shin NR, Whon TW, Roh SW, Kim MS, Jung MJ, Lee J, Bae JW., J. Bacteriol. 193(16), 2011
PMID: 21685278
Shin NR, Whon TW, Roh SW, Kim MS, Jung MJ, Lee J, Bae JW., J. Bacteriol. 193(16), 2011
PMID: 21685278
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
Tamura K, Dudley J, Nei M, Kumar S., Mol. Biol. Evol. 24(8), 2007
PMID: 17488738
Tamura K, Dudley J, Nei M, Kumar S., Mol. Biol. Evol. 24(8), 2007
PMID: 17488738
Corynebacterium terpenotabidum sp. nov., a bacterium capable of degrading squalene.
Takeuchi M, Sakane T, Nihira T, Yamada Y, Imai K., Int. J. Syst. Bacteriol. 49 Pt 1(), 1999
PMID: 10028267
Takeuchi M, Sakane T, Nihira T, Yamada Y, Imai K., Int. J. Syst. Bacteriol. 49 Pt 1(), 1999
PMID: 10028267
AUTHOR UNKNOWN, FEMS Microbiol. Lett. 66(1-3), 1990
AUTHOR UNKNOWN, Syst. Appl. Microbiol. 13(), 1990
Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.
Ventura M, Canchaya C, Tauch A, Chandra G, Fitzgerald GF, Chater KF, van Sinderen D., Microbiol. Mol. Biol. Rev. 71(3), 2007
PMID: 17804669
Ventura M, Canchaya C, Tauch A, Chandra G, Fitzgerald GF, Chater KF, van Sinderen D., Microbiol. Mol. Biol. Rev. 71(3), 2007
PMID: 17804669
Acetylornithinase of Escherichia coli: partial purification and some properties.
VOGEL HJ, BONNER DM., J. Biol. Chem. 218(1), 1956
PMID: 13278318
VOGEL HJ, BONNER DM., J. Biol. Chem. 218(1), 1956
PMID: 13278318
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 25323597
PubMed | Europe PMC
Suchen in