Daniel Wibberg

PEVZ-ID
19653681

179 Publikationen

Alle markieren

  • [179]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 3000113
    Hellwig P, Kautzner D, Heyer R, Dittrich A, Wibberg D, Busche T, Winkler A, Reichl U, Benndorf D (2024)
    Tracing active members in microbial communities by BONCAT and click chemistry-based enrichment of newly synthesized proteins.
    ISME Communications: New Developments in Microbial Ecology 4(1): ycae153.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [178]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2999937
    Dianat M, Straaten S, Maritato A, Wibberg D, Busche T, Blank LM, Ebert BE (2024)
    Exploration of InSitu Extraction for Enhanced Triterpenoid Production by Saccharomyces cerevisiae.
    Microbial Biotechnology 17(12): e70061.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [177]
    2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2994036
    Pawlowski K, Wibberg D, Mehrabi S, Obaid NB, Patyi A, Berckx F, Nguyen H, Hagen M, Lundin D, Brachmann A, Blom J, Herrera-Belaroussi A, Abrouk D, Pujic P, Hahlin A-S, Kalinowski J, Normand P, Sellstedt A (2024)
    Frankia [NiFe] uptake hydrogenases and genome reduction: different lineages of loss.
    FEMS Microbiology Ecology : fiae147.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [176]
    2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2994435
    Berckx F, Van Nguyen T, Hilker R, Wibberg D, Battenberg K, Kalinowski J, Berry A, Pawlowski K (2024)
    Host dependent specialized metabolism of nitrogen export in actinorhizal nodules induced by Frankia cluster-2.
    Journal of Experimental Botany: erae446.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [175]
    2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2994029
    Yeap CSY, Nguyen NHA, Busche T, Wibberg D, Riha J, Kruse O, Cernik M, Blifernez-Klassen O, Sevcu A (2024)
    Transcriptomic analysis and cellular responses to nanoscale zero-valent iron in green microalga Raphidocelis subcapitata.
    Ecotoxicology and Environmental Safety 286: 117194.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [174]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2992795
    Abdel-Glil MY, Solle J, Wibberg D, Neubauer H, Sprague LD (2024)
    Chromosome-level genome assembly of Tritrichomonas foetus, the causative agent of Bovine Trichomonosis.
    Scientific Data 11(1): 1030 .
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [173]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2992114
    Dielentheis-Frenken MRE, Wibberg D, Blank LM, Tiso T (2024)
    Draft genome sequence and annotation of the polyextremotolerant polyol lipid-producing fungus aureobasidium pullulans NRRL 62042.
    BMC genomic data 25(1): 75.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [172]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2988657
    Lick S, Wibberg D, Busche T, Blom J, Grimmler C, Goesmann A, Kalinowski J (2024)
    Pseudomonas kulmbachensis sp. nov. and Pseudomonas paraveronii sp. nov., originating from chilled beef and chicken breast.
    International Journal of Systematic and Evolutionary Microbiology 74(4).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [171]
    2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2988344
    Berckx F, Wibberg D, Brachmann A, Morrison C, Obaid NB, Blom J, Kalinowski J, Wall LG, Pawlowski K (2024)
    Genome analysis and biogeographic distribution of the earliest divergent Frankia clade in the southern hemisphere.
    FEMS Microbiology Ecology: fiae042.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [170]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2986496
    Helm T, Stausberg T, Previati M, Ernst P, Klein B, Busche T, Kalinowski J, Wibberg D, Wiechert W, Claerhout L, Wierckx N, Noack S (2024)
    Itaconate Production from Crude Substrates with U. maydis: Scale-up of an Industrially Relevant Bioprocess.
    Microbial Cell Factories 23(1): 29.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [169]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985596
    Lecaudey LA, Netzer R, Wibberg D, Busche T, Bloecher N (2024)
    Metatranscriptome analysis reveals the putative venom toxin repertoire of the biofouling hydroid Ectopleura larynx.
    Toxicon 237: 107556.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [168]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2982191
    Stanelle-Bertram S, Beck S, Mounogou NK, Schaumburg B, Stoll F, Al Jawazneh A, Schmal Z, Bai T, Zickler M, Beythien G, Becker K, de la Roi M, Heinrich F, Schulz C, Sauter M, Krasemann S, Lange P, Heinemann A, van Riel D, Leijten L, Bauer L, van den Bosch TPP, Lopuhaä B, Busche T, Wibberg D, Schaudien D, Goldmann T, Lüttjohann A, Ruschinski J, Jania H, Müller Z, Pinho Dos Reis V, Krupp-Buzimkic V, Wolff M, Fallerini C, Baldassarri M, Furini S, Norwood K, Käufer C, Schützenmeister N, von Köckritz-Blickwede M, Schroeder M, Jarczak D, Nierhaus A, Welte T, Kluge S, McHardy AC, Sommer F, Kalinowski J, Krauss-Etschmann S, Richter F, von der Thüsen J, Baumgärtner W, Klingel K, Ondruschka B, Renieri A, Gabriel G (2023)
    CYP19A1 mediates severe SARS-CoV-2 disease outcome in males.
    Cell Reports Medicine 4(9): 101152.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [167]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984313
    Zimmermann A, Nouioui I, Pötter G, Neumann-Schaal M, Wolf J, Wibberg D, Mast Y (2023)
    Kitasatospora fiedleri sp. nov., a novel antibiotic-producing member of the genus Kitasatospora.
    International Journal of Systematic and Evolutionary Microbiology 73(11).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [166]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2986284
    Sun Y, Gerke J, Becker K, Kuhnert E, Verwaaijen B, Wibberg D, Kalinowski J, Stadler M, Cox RJ (2023)
    Rapid discovery of terpene tailoring enzymes for total biosynthesis.
    Chemical Science 14(46): 13463-13467.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [165]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981747
    Kurpejovic E, Wibberg D, Bastem G, Burgardt A, Busche T, Altinisik Kaya FE, Dräger A, Wendisch VF, Sariyar Akbulut B (2023)
    Can Genome Sequencing Coupled to Flux Balance Analyses Offer Precision Guidance for Industrial Strain Development? The Lessons from Carbon Trafficking in Corynebacterium glutamicum ATCC 21573.
    OMICS: A Journal of Integrative Biology 27(9): 434-443.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [164]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967793 OA
    Köller N, Hahnke S, Zverlov V, Wibberg D, Klingl A, Busche T, Klocke M, Pühler A, Schlüter A, Liebl W, Maus I (2022)
    Anaeropeptidivorans aminofermentans gen. nov., sp. nov., a mesophilic proteolytic salt-tolerant bacterium isolated from a laboratory-scale biogas fermenter, and emended description of Clostridium colinum.
    International Journal of Systematic and Evolutionary Microbiology 72(12).
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [163]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2968933
    Berckx F, Bandong CM, Wibberg D, Kalinowski J, Willemse J, Brachmann A, Simbahan J, Pawlowski K (2022)
    Streptomyces coriariae sp. nov., a novel streptomycete isolated from actinorhizal nodules of Coriaria intermedia.
    International Journal of Systematic and Evolutionary Microbiology 72(12).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [162]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966901 OA
    Maus I, Wibberg D, Belmann P, Hahnke S, Huang L, Spröer C, Bunk B, Blom J, Sczyrba A, Pühler A, Klocke M, Schlüter A (2022)
    The novel oligopeptide utilizing species Anaeropeptidivorans aminofermentans M3/9T, its role in anaerobic digestion and occurrence as deduced from large-scale fragment recruitment analyses.
    Frontiers in Microbiology 13: 1032515.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [161]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961071 OA
    Willenbücher K, Wibberg D, Huang L, Conrady M, Ramm P, Gätcke J, Busche T, Brandt C, Szewzyk U, Schlüter A, Barrero Canosa J, Maus I (2022)
    Phage Genome Diversity in a Biogas-Producing Microbiome Analyzed by Illumina and Nanopore GridION Sequencing.
    Microorganisms 10(2): 368.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [160]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965159 OA
    Schafhauser T, Wibberg D, Binder A, Rückert C, Busche T, Wohlleben W, Kalinowski J (2022)
    Genome Assembly and Genetic Traits of the Pleuromutilin-Producer Clitopilus passeckerianus DSM1602.
    Journal of Fungi 8(8): 862.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [159]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965454
    Berckx F, Nguyen TV, Bandong CM, Lin H-H, Yamanaka T, Katayama S, Wibberg D, Blom J, Kalinowski J, Tateno M, Simbahan J, Liu C-T, Brachmann A, Pawlowski K (2022)
    A tale of two lineages: how the strains of the earliest divergent symbiotic Frankia clade spread over the world.
    BMC Genomics 23(1): 602.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [158]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965146 OA
    Díaz M, Bach T, González Anta G, Agaras B, Wibberg D, Noguera F, Canciani W, Valverde C (2022)
    Agronomic efficiency and genome mining analysis of the wheat-biostimulant rhizospheric bacterium Pseudomonas pergaminensis sp. nov. strain 1008T.
    Frontiers in Plant Science 13: 894985.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [157]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964659
    Handel F, Kulik A, Wex KW, Berscheid A, Saur JS, Winkler A, Wibberg D, Kalinowski J, Broetz-Oesterhelt H, Mast Y (2022)
    psi-Footprinting approach for the identification of protein synthesis inhibitor producers.
    NAR: Genomics and Bioinformatics 4(3): lqac055.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [156]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2963695 OA
    Liebal UW, Ullmann L, Lieven C, Kohl P, Wibberg D, Zambanini T, Blank LM (2022)
    Ustilago maydis Metabolic Characterization and Growth Quantification with a Genome-Scale Metabolic Model.
    Journal of Fungi 8(5): 524.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [155]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961676 OA
    Ullmann L, Wibberg D, Busche T, Rückert C, Müsgens A, Kalinowski J, Blank LM (2022)
    Seventeen Ustilaginaceae High-Quality Genome Sequences Allow Phylogenomic Analysis and Provide Insights into Secondary Metabolite Synthesis.
    Journal of Fungi 8(3): 269.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [154]
    2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2961214
    Oberhofer M, Malfent F, Zehl M, Urban E, Wackerlig J, Reznicek G, Vignolle GA, Rückert C, Busche T, Wibberg D, Zotchev SB (2022)
    Biosynthetic potential of the endophytic fungus Helotiales sp. BL73 revealed via compound identification and genome mining.
    Applied and Environmental Microbiology : aem0251021.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [153]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961099 OA
    Klaus T, Ninck S, Albersmeier A, Busche T, Wibberg D, Jiang J, Elcheninov AG, Zayulina KS, Kaschani F, Braesen C, Overkleeft HS, Kalinowski J, Kublanov IV, Kaiser M, Siebers B (2022)
    Activity-Based Protein Profiling for the Identification of Novel Carbohydrate-Active Enzymes Involved in Xylan Degradation in the Hyperthermophilic Euryarchaeon Thermococcus sp. Strain 2319x1E.
    Frontiers in Microbiology 12: 734039.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [152]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950292 OA
    Blifernez-Klassen O, Klassen V, Wibberg D, Cebeci E, Henke C, Rückert C, Chaudhari S, Rupp O, Blom J, Winkler A, Al-Dilaimi A, Goesmann A, Sczyrba A, Kalinowski J, Bräutigam A, Kruse O (2021)
    Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia.
    Scientific Reports 11(1): 1726.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
     
  • [151]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953016 OA
    Haupka C, Fernandes de Brito L, Busche T, Wibberg D, Wendisch VF (2021)
    Genomic and transcriptomic investigation of the physiological response of the methylotroph Bacillus methanolicus to 5-aminovalerate.
    Frontiers in Microbiology 12: 664598.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [150]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956428 OA
    Mingyar E, Muhling L, Kulik A, Winkler A, Wibberg D, Kalinowski J, Blin K, Weber T, Wohlleben W, Stegmann E (2021)
    A Regulator Based "Semi-Targeted" Approach to Activate Silent Biosynthetic Gene Clusters.
    International journal of molecular sciences 22(14): 7567.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [149]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957996 OA
    Wibberg D, Genzel F, Verwaaijen B, Blom J, Rupp O, Goesmann A, Zrenner R, Grosch R, Pühler A, Schlüter A (2021)
    Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14.
    Journal of Fungi 7(10): 832.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [148]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958416 OA
    Luttermann T, Rückert C, Wibberg D, Busche T, Schwarzhans J-P, Friehs K, Kalinowski J (2021)
    Establishment of a near-contiguous genome sequence of the citric acid producing yeast DSM 3286 with resolution of rDNA clusters and telomeres.
    NAR Genomics and Bioinformatics 3(4): 13.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [147]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951540
    Mayer G, Muller W, Schork K, Uszkoreit J, Weidemann A, Wittig U, Rey M, Quast C, Felden J, Glockner FO, Lange M, Arend D, Beier S, Junker A, Scholz U, Schuler D, Kestler HA, Wibberg D, Pühler A, Twardziok S, Eils J, Eils R, Hoffmann S, Eisenacher M, Turewicz M (2021)
    Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
    Briefings in Bioinformatics.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [146]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957237
    Secic E, Zanini S, Wibberg D, Jelonek L, Busche T, Kalinowski J, Nasfi S, Thielmann J, Imani J, Steinbrenner J, Kogel K-H (2021)
    A novel plant-fungal association reveals fundamental sRNA and gene expression reprogramming at the onset of symbiosis.
    BMC Biology 19(1): 171 .
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [145]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955526
    Lick S, Wibberg D, Winkler A, Blom J, Grimmler C, Goesmann A, Kalinowski J, Krockel L (2021)
    Pseudomonas paraversuta sp. nov. isolated from refrigerated dry-aged beef.
    International journal of systematic and evolutionary microbiology 71(6).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [144]
    2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2954389
    Oberbeckmann S, Bartosik D, Huang S, Werner J, Hirschfeld C, Wibberg D, Heiden SE, Bunk B, Overmann J, Becher D, Kalinowski J, Schweder T, Labrenz M, Markert S (Accepted)
    Genomic and proteomic profiles of biofilms on microplastics are decoupled from artificial surface properties.
    Environmental microbiology.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [143]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949923 OA
    Wibberg D, Price-Carter M, Rückert C, Blom J, Möbius P (2021)
    Complete Genome Sequence of Ovine Mycobacterium avium subsp. paratuberculosis Strain JIII-386 (MAP-S/type III) and Its Comparison to MAP-S/type I, MAP-C, and M. avium Complex Genomes.
    Microorganisms 9(1): 70.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [142]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949961
    Nilsson JF, Castellani LG, Draghi WO, Mogro EG, Wibberg D, Winkler A, Hansen LH, Schlüter A, Pühler A, Kalinowski J, Torres Tejerizo GA, Pistorio M (2021)
    Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress.
    FEMS Microbiology Ecology 97(1): fiaa235.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [141]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939840 OA
    Hassa J, Wibberg D, Maus I, Pühler A, Schlüter A (2020)
    Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter.
    Microorganisms 8(1): 13.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [140]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941608 OA
    Stadler M, Lambert C, Wibberg D, Kalinowski J, Cox RJ, Kolarik M, Kuhnert E (2020)
    Intragenomic polymorphisms in the ITS region of high-quality genomes of the Hypoxylaceae (Xylariales, Ascomycota).
    MYCOLOGICAL PROGRESS 19(3): 235-245.
    PUB | PDF | DOI | WoS
     
  • [139]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943800 OA
    Wibberg D, Stadler M, Lambert C, Bunk B, Sproer C, Rückert C, Kalinowski J, Cox RJ, Kuhnert E (2020)
    High quality genome sequences of thirteen Hypoxylaceae (Ascomycota) strengthen the phylogenetic family backbone and enable the discovery of new taxa.
    FUNGAL DIVERSITY.
    PUB | PDF | DOI | WoS
     
  • [138]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941645 OA
    Maus I, Klocke M, Derenkó J, Stolze Y, Beckstette M, Jost C, Wibberg D, Blom J, Henke C, Willenbücher K, Rumming M, Rademacher A, Pühler A, Sczyrba A, Schlüter A (2020)
    Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics.
    Environmental Microbiome 15(1): 7.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [137]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950214
    Tian D-S, Kuhnert E, Ouazzani J, Wibberg D, Kalinowski J, Cox RJ (2020)
    The sporothriolides. A new biosynthetic family of fungal secondary metabolites.
    Chemical Science 11(46): 12477-12484.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [136]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949597 OA
    Maus I, Tubbesing TJ, Wibberg D, Heyer R, Hassa J, Tomazetto G, Huang L, Bunk B, Spröer C, Benndorf D, Zverlov V, Pühler A, Klocke M, Sczyrba A, Schlüter A (2020)
    The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses.
    Microorganisms 8(12): 2024.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [135]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945217 OA
    Gurwitz KT, Singh Gaur P, Bellis LJ, Larcombe L, Alloza E, Balint BL, Botzki A, Dimec J, Dominguez Del Angel V, Fernandes PL, Korpelainen E, Krause R, Kuzak M, Le Pera L, Leskosek B, Lindvall JM, Marek D, Martinez PA, Muyldermans T, Nygard S, Palagi PM, Peterson H, Psomopoulos F, Spiwok V, van Gelder CWG, Via A, Vidak M, Wibberg D, Morgan SL, Rustici G (2020)
    A framework to assess the quality and impact of bioinformatics training across ELIXIR.
    PLoS computational biology 16(7): e1007976.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [134]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948423
    Herrera-Belaroussi A, Normand P, Pawlowski K, Fernandez MP, Wibberg D, Kalinowski J, Brachmann A, Berckx F, Lee N, Blom J, Pozzi AC, Fournier P, Bethencourt L, Dubost A, Abrouk D, Sellstedt A (2020)
    Candidatus Frankia nodulisporulans sp. nov., an Alnus glutinosa-infective Frankia species unable to grow in pure culture and able to sporulate in-planta.
    Systematic and applied microbiology 43(6): 126134.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [133]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945213
    Zrenner R, Genzel F, Verwaaijen B, Wibberg D, Grosch R (2020)
    Necrotrophic lifestyle of Rhizoctonia solani AG3-PT during interaction with its host plant potato as revealed by transcriptome analysis.
    Scientific reports 10: 12574.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [132]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945458
    Allers K, Stahl-Hennig C, Fiedler T, Wibberg D, Hofmann J, Kunkel D, Moos V, Kreikemeyer B, Kalinowski J, Schneider T (2020)
    The colonic mucosa-associated microbiome in SIV infection: shift towards Bacteroidetes coincides with mucosal CD4(+) T cell depletion and enterocyte damage.
    SCIENTIFIC REPORTS 10(1).
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [131]
    2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2944989
    Tomazetto G, Pimentel AC, Wibberg D, Dixon N, Squina FM (2020)
    Multi-omic directed discovery of cellulosomes, polysaccharide utilization loci, and lignocellulases from an enriched rumen anaerobic consortium.
    Applied and environmental microbiology.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [130]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943896 OA
    Ayed A, Wibberg D, Zendah El Euch I, Frese M, Limam F, Sewald N (2020)
    Draft genome sequence of Streptomyces tunisialbus DSM 105760T.
    Archives of microbiology 202: 2013-2017.
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    Biosynthetic reconstitution of deoxysugar phosphoramidate metalloprotease inhibitors using an N-P-bond-forming kinase.
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    Bioactive secondary metabolites from new endophytic fungus Curvularia. sp isolated from Rauwolfia macrophylla.
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    Scientific reports 9(1): 11223.
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    Frankia-enriched metagenomes from the earliest diverging symbiotic Frankia cluster: They come in teams.
    Genome biology and evolution 11(8): 2273–2291.
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    Application of a Reverse Genetic System for Beet Necrotic Yellow Vein Virus to Study Rz1 Resistance Response in Sugar Beet.
    Frontiers in plant science 10: 1703.
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    Pseudomonas bubulae sp. nov., isolated from beef.
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    Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry.
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    A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani.
    Scientific Reports 9(1): 7221.
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    Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83.
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    PLoS ONE 13(5): e0196797.
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    Proteiniphilum saccharofermentans str. M3/6 T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions.
    Biotechnology Reports 18: e00254.
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    N-Acetylborrelidin B: a new bioactive metabolite from Streptomyces mutabilis sp MII.
    Zeitschrift für Naturforschung C 73(1-2): 49-57.
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    Harvest of the Oleaginous Microalgae Scenedesmus obtusiusculus by Flocculation From Culture Based on Natural Water Sources.
    FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY 6: 200.
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    Genome Sequence of the Bile Salt-Degrading Bacterium Novosphingobium sp. Strain Chol11, a Model Organism for Bacterial Steroid Catabolism.
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS 6(1): UNSP e01372-17.
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    Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats.
    Scientific Reports 8(1): 7783.
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    Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts.
    GigaScience 7(7): giy075.
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    Adamek M, Alanjary M, Sales-Ortells H, Goodfellow M, Bull AT, Winkler A, Wibberg D, Kalinowski J, Ziemert N (2018)
    Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species.
    BMC GENOMICS 19(1): 15.
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    Senges CHR, Al-Dilaimi A, Marchbank DH, Wibberg D, Winkler A, Haltli B, Nowrousian M, Kalinowski J, Kerr RG, Bandow JE (2018)
    The secreted metabolome of Streptomyces chartreusis and implications for bacterial chemistry.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 115(10): 2490-2495.
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    Engel K, Sauer J, Jünemann S, Winkler A, Wibberg D, Kalinowski J, Tauch A, Caspers B (2018)
    Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing.
    Microbial Ecology 76(2): 518-529.
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    The genus Borrelia reloaded.
    PLOS ONE 13(12): e0208432.
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    Fungal community profiles in agricultural soils of a long-term field trial under different tillage, fertilization and crop rotation conditions analyzed by high-throughput ITS-amplicon sequencing.
    PLOS ONE 13(4): e0195345.
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    Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome.
    Journal of Biotechology 267: 12-18.
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    Hellauer K, Uhl J, Lucio M, Schmitt-Kopplin P, Wibberg D, Huebner U, Drewes JE (2018)
    Microbiome-Triggered Transformations of Trace Organic Chemicals in the Presence of Effluent Organic Matter in Managed Aquifer Recharge (MAR) Systems.
    ENVIRONMENTAL SCIENCE & TECHNOLOGY 52(24): 14342-14351.
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    Netzer R, Henry IA, Ribicic D, Wibberg D, Broenner U, Brakstad OG (2018)
    Petroleum hydrocarbon and microbial community structure successions in marine oil-related aggregates associated with diatoms relevant for Arctic conditions.
    MARINE POLLUTION BULLETIN 135: 759-768.
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    Complete Genome Sequencing of Acinetobacter baumannii Strain K50 Discloses the Large Conjugative Plasmid pK50a Encoding Carbapenemase OXA-23 and Extended-Spectrum β-Lactamase GES-11.
    Antimicrobial Agents and Chemotherapy 62(5): e00212-18.
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    Optimization of Delta(9)-tetrahydrocannabinolic acid synthase production in Komagataella phaffii via post-translational bottleneck identification.
    JOURNAL OF BIOTECHNOLOGY 272: 40-47.
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    Characterization of the Actinonin Biosynthetic Gene Cluster.
    CHEMBIOCHEM 19(11): 1189-1195.
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    Single-bacterial genomics validates rich and varied specialized metabolism of uncultivated Entotheonella sponge symbionts.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 115(8): 1718-1723.
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    Identification of a novel aminopolycarboxylic acid siderophore gene cluster encoding the biosynthesis of ethylenediaminesuccinic acid hydroxyarginine (EDHA).
    METALLOMICS 10(5): 722-734.
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    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915518 OA
    Klein B, Wibberg D, Hallmann A (2017)
    Whole transcriptome RNA-Seq analysis reveals extensive cell type-specific compartmentalization in Volvox carteri.
    BMC Biology 15(1): 111.
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    Eliwa EM, Abdel-Razek AS, Frese M, Wibberg D, Halawa AH, El-Agrody AM, Bedair AH, Kalinowski J, Sewald N, Shaaban M (2017)
    New bioactive compounds from the marine-derived actinomycete Nocardiopsis lucentensis sp. ASMR2.
    Zeitschrift für Naturforschung B 72(5): 351-360.
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    Hersemann L, Wibberg D, Blom J, Goesmann A, Widmer F, Vorhölter F-J, Koelliker R (2017)
    Comparative genomics of host adaptive traits in Xanthomonas translucens pv. graminis.
    BMC GENOMICS 18(1): 35.
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    Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.
    Biotechnology for Biofuels 10(1): 264.
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    The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.).
    PLOS ONE 12(5): e0177278.
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    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913038 OA
    Klassen V, Blifernez-Klassen O, Wibberg D, Winkler A, Kalinowski J, Posten C, Kruse O (2017)
    Highly efficient methane generation from untreated microalgae biomass.
    Biotechnology for Biofuels 10(1): 186.
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    Evolutionary and biogeographical implications of degraded LAGLIDADG endonuclease functionality and group I intron occurrence in stony corals (Scleractinia) and mushroom corals (Corallimorpharia).
    PLOS ONE 12(3): e0173734.
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    Friehs K, Schwarzhans JP, Luttermann T, Wibberg D, Winkler A, Hübner W, Huser T, Kalinowski J (2017)
    A Mitochondrial Autonomously Replicating Sequence from Pichia pastoris for Uniform High Level Recombinant Protein Production.
    Frontiers in Microbiology 8: 780.
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    Wibberg D, Genzel F, Verwaaijen B, Blom J, Rupp O, Goesmann A, Zrenner R, Grosch R, Pühler A, Schlüter A (2017)
    Draft genome sequence of the potato pathogen Rhizoctonia solani AG3-PT isolate Ben3.
    Archives of Microbiology 199(7): 1065-1068.
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    Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis.
    Journal of Microbiology and Biotechnology 27(2): 321-334.
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    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908419 OA
    Torres Tejerizo GA, Wibberg D, Winkler A, Ormeño-Orrillo E, Martínez-Romero E, Niehaus K, Pühler A, Kalinowski J, Lagares A, Schlüter A, Pistorio M (2017)
    Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T.
    Genome Announcements 5(4): e01513-16.
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    Transcriptome profiling of the Australian arid-land plant Eremophila serrulata (A.DC.) Druce (Scrophulariaceae) for the identification of monoterpene synthases.
    PHYTOCHEMISTRY 136: 15-22.
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    Tomazetto G, Hahnke S, Langer T, Wibberg D, Blom J, Maus I, Pühler A, Klocke M, Schlüter A (2017)
    The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor.
    Journal of Biotechnology 257: 178-186.
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    Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales.
    Archives of Virology 162(2): 555-559.
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    Hamed A, Abdel-Razek AS, Frese M, Wibberg D, El-Haddad AF, Ibrahim TMA, Kalinowski J, Sewald N, Shaaban M (2017)
    New oxaphenalene derivative from marine-derived Streptomyces griseorubens sp ASMR4.
    Zeitschrift für Naturforschung B 72(1): 53-62.
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    Genome content, metabolic pathways and biotechnological potential of the psychrophilic Arctic bacterium Psychrobacter sp DAB_AL43B, a source and a host of novel Psychrobacter-specific vectors.
    Journal of Biotechnology 263: 64-74.
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    Kalinowski J, Ahrens B, Al-Dilaimi A, Winkler A, Wibberg D, Schleenbecker U, Rückert C, Wölfel R, Grass G (2017)
    Isolation and whole genome analysis of endospore-forming bacteria from heroin.
    Forensic Sci Int Genet 32: 1-6.
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    Lifestyle-determining extrachromosomal replicon pAMV1 and its contribution to the carbon metabolism of the methylotrophic bacterium Paracoccus aminovorans JCM 7685.
    Environmental Microbiology 19(11): 4536-4550.
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    Linking secondary metabolites to biosynthesis genes in the fungal endophyte Cyanodermella asteris: The anti-cancer bisanthraquinone skyrin.
    Journal of Biotechnology 257: 233-239.
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    Torres Tejerizo GA, Kim YS, Maus I, Wibberg D, Winkler A, Off S, Pühler A, Scherer P, Schlüter A (2017)
    Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste.
    Journal of Biotechnology 247: 1-5.
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    Alkhateeb R, Rückert C, Rupp O, Pucker B, Hublik G, Wibberg D, Niehaus K, Pühler A, Vorhölter F-J (2017)
    Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data.
    Journal of Biotechnology 253: 55-61.
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    Wibberg D, Andersson L, Tzelepis G, Rupp O, Blom J, Jelonek L, Pühler A, Fogelqvist J, Varrelmann M, Schlüter A, Dixelius C (2016)
    Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes.
    BMC Genomics 17(1): 245.
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    Lenta BN, Ngatchou J, Frese M, Ladoh-Yemeda F, Voundi S, Nardella F, Michalek C, Wibberg D, Ngouela S, Tsamo E, Kaiser M, Kalinowski J, Sewald N (2016)
    Purpureone, an antileishmanial ergochrome from the endophytic fungus Purpureocillium lilacinum.
    Zeitschrift für Naturforschung B 71(11): 1159-1167.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907431
    Bartholomaeus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
    Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV.
    PLOS ONE 11(11): e0165965.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908585
    Zuñiga-Bahamon A, Tobar-Tosse F, Guillermo-Ortega J, Wibberg D, Tauch A (2016)
    Draft Genome Sequence of Streptococcus anginosus BVI, a New Vaginal Pathogen Candidate.
    Genome Announcements 4(6): e01417-16.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906720
    Nguyen TV, Wibberg D, Battenberg K, Blom J, Vanden Heuvel B, Berry AM, Kalinowski J, Pawlowski K (2016)
    An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH.
    BMC Genomics 17(1): 796.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
    Martini MC, Wibberg D, Lozano M, Torres Tejerizo G, Albicoro FJ, Jaenicke S, van Elsas JD, Petroni A, Garcillan-Barcia MP, de la Cruz F, Schlüter A, Pühler A, Pistorio M, Lagares A, Del Papa MF (2016)
    Genomics of high molecular weight plasmids isolated from an on-farm biopurification system.
    Scientific Reports 6(1): 28284.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655 OA
    Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K (2016)
    Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization.
    Microbial Cell Factories 15(1): 84.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993 OA
    Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
    Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor.
    Genome Announcements 4(4): e00687-16.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970 OA
    Maus I, Wibberg D, Winkler A, Pühler A, Schnürer A, Schlüter A (2016)
    Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor.
    Genome Announcements 4(3): e00568-16.
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    Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
    Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor.
    Genome Announcements 4(3): e00609-16.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907676 OA
    Jaenicke S, Bunk B, Wibberg D, Spröer C, Hersemann L, Blom J, Winkler A, Schatschneider S, Albaum S, Kölliker R, Goesmann A, Pühler A, Overmann J, Vorhölter F-J (2016)
    Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T).
    Genome Announcements 4(6): e01334-16.
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    Schwarzhans JP, Wibberg D, Winkler A, Luttermann T, Kalinowski J, Friehs K (2016)
    Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing.
    Scientific Reports 6(1): 38952.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976 OA
    Blifernez-Klassen O, Wibberg D, Winkler A, Blom J, Goesmann A, Kalinowski J, Kruse O (2016)
    Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa).
    Genome Announcements 4(3): e00524-16.
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    Wibberg D, Al-Dilaimi A, Busche T, Wedderhoff I, Schrempf H, Kalinowski J, Lucana DO de O (2016)
    Complete genome sequence of Streptomyces reticuli, an efficient degrader of crystalline cellulose.
    JOURNAL OF BIOTECHNOLOGY 222: 13-14.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
    Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
    Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")".
    Journal of Biotechnology 237: 35.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905630
    Gren T, Ortseifen V, Wibberg D, Schneiker-Bekel S, Bednarz H, Niehaus K, Zemke T, Persicke M, Pühler A, Kalinowski J (2016)
    Genetic engineering in Actinoplanes sp SE50/110-development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors.
    Journal of Biotechnology 232: 79-88.
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    Wibberg D, Andersson L, Rupp O, Goesmann A, Pühler A, Varrelmann M, Dixelius C, Schlüter A (2016)
    Draft genome sequence of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB strain BBA69670.
    Journal of Biotechnology 222: 11-12.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704
    Celis JS, Wibberg D, Winkler A, Wilke T, Kalinowski J (2016)
    Complete mitochondrial genome of the scleractinian coral Porites rus.
    Mitochondrial DNA 27(5): 3695-3696.
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    Maus I, Cibis KG, Bremges A, Stolze Y, Wibberg D, Tomazetto G, Blom J, Sczyrba A, König H, Pühler A, Schlüter A (2016)
    Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment.
    Journal of Biotechnology 232: 50-60.
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    Wibberg D, Bremges A, Dammann-Kalinowski T, Maus I, Igeño MI, Vogelsang R, König C, Luque-Almagro VM, Roldán MD, Sczyrba A, Moreno-Vivián C, Blasco R, Pühler A, Schlüter A (2016)
    Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing.
    Journal of Biotechnology 232: 61-68.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
    Liebe S, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
    Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes.
    FEMS Microbiology Ecology 92(2): fiw004.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905505
    Wolf T, Gren T, Thieme E, Wibberg D, Zemke T, Pühler A, Kalinowski J (2016)
    Targeted genome editing in the rare actinomycete Actinoplanes sp SE50/110 by using the CRISPR/Cas9 System.
    Journal of Biotechnology 231: 122-128.
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    Krahn T, Wibberg D, Maus I, Winkler A, Bontron S, Sczyrba A, Nordmann P, Pühler A, Poirel L, Schlüter A (2016)
    Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene.
    Antimicrobial Agents and Chemotherapy 60(5): 3032-3040.
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    Alkhateeb R, Vorhölter F-J, Rückert C, Mentz A, Wibberg D, Hublik G, Niehaus K, Pühler A (2016)
    Genome wide transcription start sites analysis of the Xanthomonas campestris pv. campestris B100 with insights into the gum gene cluster directing the biosynthesis of the exopolysaccharide xanthan.
    J Biotechnol 225: 18-28.
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    Kröber M, Verwaaijen B, Wibberg D, Winkler A, Pühler A, Schlüter A (2016)
    Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing.
    Journal of Biotechnology 231: 212-223.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905629
    Tomazetto G, Hahnke S, Koeck DE, Wibberg D, Maus I, Pühler A, Klocke M, Schlüter A (2016)
    Complete genome analysis of Clostridium bornimense strain M2/40(T). A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor.
    Journal of Biotechnology 232: 38-49.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946456
    Theuerl S, Kohrs F, Benndorf D, Maus I, Wibberg D, Schlüter A, Kausmann R, Heiermann M, Rapp E, Reichl U, Pühler A, Klocke M (2015)
    Community shifts in a well-operating agricultural biogas plant: how process variations are handled by the microbiome.
    Applied Microbiology and Biotechnology 99(18): 7791-7803.
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    Krahn T, Wibberg D, Maus I, Winkler A, Pühler A, Poirel L, Schlüter A (2015)
    Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses.
    Genome Announcements 3(4): e00850-15.
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    Dziewit L, Pyzik A, Szuplewska M, Matlakowska R, Mielnicki S, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
    Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals.
    Frontiers in Microbiology 6: 152.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035
    Arnold M, Wibberg D, Blom J, Schatschneider S, Winkler A, Kutter Y, Rückert C, Albersmeier A, Albaum S, Goesmann A, Zange S, Heesemann J, Pühler A, Hogardt M, Vorhölter F-J (2015)
    Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum.
    Genome announcements 3(4): e00680-15.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2778477
    Dziewit L, Czarnecki J, Prochwicz E, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
    Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686.
    Frontiers in Microbiology 6: 852.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901297 OA
    Wibberg D, Rupp O, Blom J, Jelonek L, Kröber M, Verwaaijen B, Goesmann A, Albaum S, Grosch R, Pühler A, Schlüter A (2015)
    Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates.
    Plos One 10(12): e0144769.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2785064 OA
    Krahn T, Wibberg D, Maus I, Winkler A, Nordmann P, Pühler A, Poirel L, Schlüter A (2015)
    Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1.
    Genome Announcements 3(5): e01008-15.
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    Wibberg D, Rupp O, Jelonek L, Kröber M, Verwaaijen B, Blom J, Winkler A, Goesmann A, Grosch R, Pühler A, Schlüter A (2015)
    Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system.
    Journal of Biotechnology 203: 19-21.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733521
    Stoeveken J, Singh R, Kolkenbrock S, Zakrzewski M, Wibberg D, Eikmeyer FG, Pühler A, Schlüter A, Moerschbacher BM (2015)
    Successful heterologous expression of a novel chitinase identified by sequence analyses of the metagenome from a chitin-enriched soil sample.
    Journal of Biotechnology 201: 60-68.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717648
    Hahnke S, Maus I, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2015)
    Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor.
    Journal of Biotechnology 193: 34-36.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758122
    Wibberg D, Alkhateeb R, Winkler A, Albersmeier A, Schatschneider S, Albaum S, Niehaus K, Hublik G, Pühler A, Vorhölter F-J (2015)
    Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951).
    Journal of Biotechnology 204: 45-46.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758134
    Maus I, Cibis KG, Wibberg D, Winkler A, Stolze Y, König H, Pühler A, Schlüter A (2015)
    Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant.
    Journal of Biotechnology 203: 17-18.
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    Maus I, Wibberg D, Stantscheff R, Stolze Y, Blom J, Eikmeyer FG, Fracowiak J, König H, Pühler A, Schlüter A (2015)
    Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants.
    Journal of Biotechnology 201: 43-53.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901214
    Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2015)
    Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor.
    Journal of Biotechnology 214: 59-60.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764185
    Schafhauser T, Wibberg D, Rückert C, Winkler A, Flor L, van Pée K-H, Fewer DP, Sivonen K, Jahn L, Ludwig-Müller J, Caradec T, Jacques P, Huijbers MME, van Berkel WJH, Weber T, Wohlleben W, Kalinowski J (2015)
    Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential.
    Journal of Biotechnology 211: 101-102.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731292
    Tomazetto G, Wibberg D, Schlüter A, Oliveira VM (2015)
    New FeFe-hydrogenase genes identified in a metagenomic fosmid library from a municipal wastewater treatment plant as revealed by high-throughput sequencing.
    Research in Microbiology 166(1): 9-19.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2732884
    Fernandes de Brito L, Bach E, Kalinowski J, Rückert C, Wibberg D, Passaglia L, Wendisch VF (2015)
    Complete genome sequence of Paenibacillus riograndensis SBR5T, a Gram-positive diazotrophic rhizobacterium.
    Journal of Biotechnology 207: 30-31.
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2651944
    Tielen P, Wibberg D, Blom J, Rosin N, Meyer A-K, Bunk B, Schobert M, Tüpker R, Schatschneider S, Rückert C, Albersmeier A, Goesmann A, Vorhölter F-J, Jahn D, Pühler A (2014)
    Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection.
    Genome announcements 2(1).
    PUB | DOI | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2658490
    Dziewit L, Czarnecki J, Wibberg D, Radlinska M, Mrozek P, Szymczak M, Schlüter A, Pühler A, Bartosik D (2014)
    Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids.
    BMC Genomics 15(1): 124.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678800 OA
    Kröber M, Wibberg D, Grosch R, Eikmeyer FG, Verwaaijen B, Chowdhury SP, Hartmann A, Pühler A, Schlüter A (2014)
    Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing.
    Frontiers in Microbiology 5: 252.
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672926 OA
    Wibberg D, Tielen P, Blom J, Rosin N, Schobert M, Tüpker R, Schatschneider S, Spilker D, Albersmeier A, Goesmann A, Vorhölter F-J, Pühler A, Jahn D (2014)
    Genome Sequence of the Acute Urethral Catheter Isolate Pseudomonas aeruginosa MH38.
    Genome announcements 2(2): e00161-14.
    PUB | PDF | DOI | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717549
    Geizecler T, Hahnke S, Maus I, Wibberg D, Pühler A, Schlüter A, Klocke M (2014)
    Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation.
    Journal of Biotechnology 192: 59-61.
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694915
    Hahnke S, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2014)
    Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw.
    Journal of Biotechnology 184: 199-200.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693310
    Wibberg D, Jelonek L, Rupp O, Kröber M, Goesmann A, Grosch R, Pühler A, Schlüter A (2014)
    Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs).
    Fungal Biology 118(9-10): 800-813.
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685861
    Torres Tejerizo G, Pistorio M, Althabegoiti MJ, Cervantes L, Wibberg D, Schlüter A, Pühler A, Lagares A, Romero D, Brom S (2014)
    Rhizobial plasmid pLPU83a is able to switch between different transfer machineries depending on its genomic background.
    FEMS Microbiology Ecology 88(3): 565-578.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2675608
    Wibberg D, Torres Tejerizo G, Florencia Del Papa M, Martini C, Pühler A, Lagares A, Schlüter A, Pistorio M (2014)
    Genome sequence of the acid-tolerant strain Rhizobium sp LPU83.
    Journal of Biotechnology 176: 40-41.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717539
    Maus I, Stantscheff R, Wibberg D, Stolze Y, Winkler A, Pühler A, König H, Schlüter A (2014)
    Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT.
    Journal of Biotechnology 192: 40-41.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717558
    Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Liebl W, Schlüter A (2014)
    First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant.
    Journal of Biotechnology 192: 154-155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2707731
    Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2014)
    Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant.
    Journal of Biotechnology 188: 136-137.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676049
    Schlüter A, Nordmann P, Bonnin RA, Millemann Y, Eikmeyer FG, Wibberg D, Pühler A, Poirel L (2014)
    IncH-type plasmid harboring the blaCTX-M-15, blaDHA-1, and qnrB4 genes recovered from animal isolates.
    Antimicrobial Agents and Chemotherapy 58(7): 3768-3773.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
    Wibberg D, Luque-Almagro VM, Igeño MI, Bremges A, Roldán MD, Merchán F, Sáez LP, Guijo MI, Manso MI, Macías D, Cabello P, Becerra G, Ibáñez MI, Carmona MI, Escribano MP, Castillo F, Sczyrba A, Moreno-Vivián C, Blasco R, Pühler A, Schlüter A (2014)
    Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.
    Journal of biotechnology 175: 67-68.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605193 OA
    Eikmeyer FG, Rademacher A, Hanreich A, Hennig M, Jaenicke S, Maus I, Wibberg D, Zakrzewski M, Pühler A, Klocke M, Schlüter A (2013)
    Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms.
    Biotechnology for Biofuels 6(1): 49.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2549908
    Wibberg D, Jelonek L, Rupp O, Kröber M, Eikmeyer FG, Goesmann A, Hartmann A, Borriss R, Grosch R, Pühler A, Schlüter A (2013)
    Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.
    Journal of Biotechnology 167(2): 142-155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633427
    Wibberg D, Blom J, Rückert C, Winkler A, Albersmeier A, Pühler A, Schlüter A, Scharf BE (2013)
    Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis.
    Journal of Biotechnology 168(4): 731-733.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645247
    Maus I, Wibberg D, Stantscheff R, Cibis K, Eikmeyer FG, König H, Pühler A, Schlüter A (2013)
    Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp Mb1 isolated from a production-scale biogas plant.
    Journal of Biotechnology 168(4): 734-736.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [13]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2609868
    Shah V, Zakrzewski M, Wibberg D, Eikmeyer FG, Schlüter A, Madamwar D (2013)
    Taxonomic Profiling and Metagenome Analysis of a Microbial Community from a Habitat Contaminated with Industrial Discharges.
    Microbial Ecology 66(3): 533-550.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635526
    Koeck DE, Wibberg D, Koellmeier T, Blom J, Jaenicke S, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Schlüter A (2013)
    Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation.
    Journal of Biotechnology 168(1): 62-63.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557080
    Bonnin RA, Poirel L, Nordmann P, Eikmeyer FG, Wibberg D, Pühler A, Schlüter A (2013)
    Complete sequence of broad-host-range plasmid pNOR-2000 harbouring the metallo-beta-lactamase gene blaVIM-2 from Pseudomonas aeruginosa.
    Journal of Antimicrobial Chemotherapy 68(5): 1060-1065.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
    Luque-Almagro VM, Acera F, Igeño MI, Wibberg D, Roldán MD, Sáez LP, Hennig M, Quesada A, Huertas MJ, Blom J, Merchán F, Escribano MP, Jaenicke S, Estepa J, Guijo MI, Martínez-Luque M, Macías D, Szczepanowski R, Becerra G, Ramirez S, Carmona MI, Gutiérrez O, Manso I, Pühler A, Castillo F, Moreno-Vivián C, Schlüter A, Blasco R (2013)
    Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.
    Environmental Microbiology 15(1): 253-270.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2546244
    Wibberg D, Szczepanowski R, Eikmeyer FG, Pühler A, Schlüter A (2013)
    The IncF plasmid pRSB225 isolated from a municipal wastewater treatment plant’s on-site preflooder combining antibiotic resistance and putative virulence functions is highly related to virulence plasmids identified in pathogenic E. coli isolates.
    Plasmid 69(2): 127-137.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472279
    Eikmeyer FG, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CB, Top EM, Pühler A, Schlüter A (2012)
    The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution.
    Plasmid 68(1): 13-24.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535
    Heinl S, Wibberg D, Eikmeyer FG, Szczepanowski R, Blom J, Linke B, Goesmann A, Grabherr R, Schwab H, Pühler A, Schlüter A (2012)
    Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage.
    Journal of Biotechnology 161(2): 153-166.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530446
    Stolze Y, Eikmeyer FG, Wibberg D, Brandis G, Karsten C, Krahn I, Schneiker-Bekel S, Viehöver P, Barsch A, Keck M, Top EM, Niehaus K, Schlüter A (2012)
    IncP-1 beta plasmids of Comamonas sp and Delftia sp strains isolated from a wastewater treatment plant mediate resistance to and decolorization of the triphenylmethane dye crystal violet.
    Microbiology 158(Pt_8): 2060-2072.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
    Maus I, Wibberg D, Stantscheff R, Eikmeyer FG, Seffner A, Boelter J, Szczepanowski R, Blom J, Jaenicke S, König H, Pühler A, Schlüter A (2012)
    Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester.
    Journal of Bacteriology 194(19): 5487-5488.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [4]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
    Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Szczepanowski R, Goesmann A, Setubal JC, Schmitt R, Pühler A, Schlüter A (2011)
    Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.
    Journal of Biotechnology 155(1): 50-62.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [3]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
    Küberl A, Schneider J, Thallinger GG, Anderl I, Wibberg D, Hajek T, Jaenicke S, Brinkrolf K, Goesmann A, Szczepanowski R, Pühler A, Schwab H, Glieder A, Pichler H (2011)
    High-quality genome sequence of Pichia pastoris CBS7435.
    Journal of Biotechnology 154(4): 312-320.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [2]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326465
    Torres Tejerizo G, Florencia Del Papa M, Draghi W, Lozano M, de los Angeles Giusti M, Martini C, Eugenia Salas M, Salto I, Wibberg D, Szczepanowski R, Weidner S, Schlüter A, Lagares A, Pistorio M (2011)
    First genomic analysis of the broad-host-range Rhizobium sp LPU83 strain, a member of the low-genetic diversity Oregon-like Rhizobium sp group.
    Journal of Biotechnology 155(1): 3-10.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
    Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorhölter F-J, Weidner S, Goesmann A, Pühler A, Schlüter A (In Press)
    The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.
    Journal of Biotechnology 155(1): 20-33.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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