75 Publikationen

Alle markieren

[75]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
J. Nelkner, et al., “Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes”, Genes, vol. 10, 2019, : 424.
PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
 
[74]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
H. Pankoke, et al., “F5Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota.”, FEMS microbiology letters, 2019.
PUB | DOI | PubMed | Europe PMC
 
[73]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933767
A. Fritz, et al., “CAMISIM: simulating metagenomes and microbial communities”, Microbiome, vol. 7, 2019, : 17.
PUB | DOI | WoS | PubMed | Europe PMC
 
[72]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Y. Stolze, et al., “Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants”, Microbial Biotechnology, vol. 11, 2018, pp. 667-679.
PUB | DOI | WoS | PubMed | Europe PMC
 
[71]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777
J.S. Celis, et al., “Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts”, GigaScience, vol. 7, 2018, : giy075.
PUB | DOI | WoS | PubMed | Europe PMC
 
[70]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920723
F. Meyer, et al., “AMBER: Assessment of Metagenome BinnERs”, GigaScience, 2018, : giy069.
PUB | DOI | WoS | PubMed | Europe PMC
 
[69]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930593
M. Linden, et al., “Common ELIXIR Service for Researcher Authentication and Authorisation”, F1000Research, vol. 7, 2018, : 1199.
PUB | DOI | Download (ext.) | PubMed | Europe PMC
 
[68]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
L. Huang, J. Krüger, and A. Sczyrba, “Analyzing large scale genomic data on the cloud with Sparkhit”, Bioinformatics, vol. 34, 2018, pp. 1457-1465.
PUB | DOI | WoS | PubMed | Europe PMC
 
[67]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
I. Maus, et al., “Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors”, Biotechnology for Biofuels, vol. 11, 2018, : 167.
PUB | DOI | WoS | PubMed | Europe PMC
 
[66]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918275
E.J. Fleming, et al., “Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea”, Applied and Environmental Microbiology, vol. 84, 2018, : e02239-17.
PUB | DOI | WoS | PubMed | Europe PMC
 
[65]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914959
P. da Schoren Costa, et al., “Invasion ecology applied to inoculation of plant growth promoting bacteria through a novel SIMPER-PCA approach”, Plant and Soil, vol. 422, 2018, pp. 467-478.
PUB | DOI | WoS
 
[64]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909153
J. Yu, et al., “Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism”, Journal of Biotechnology, vol. 257, 2017, pp. 58-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[63]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
S. Jünemann, et al., “Bioinformatics for NGS-based metagenomics and the application to biogas research”, Journal of Biotechnology, vol. 261, 2017, pp. 10-23.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
[62]
2017 | Datenpublikation | PUB-ID: 2914921
L. Huang, J. Krüger, and A. Sczyrba, Sparkhit evaluation data set. Bielefeld University, 2017. doi:10.4119/unibi/2914921.
PUB | Dateien verfügbar | DOI
 
[61]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516
I. Maus, et al., “Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes”, Biotechnology for Biofuels, vol. 10, 2017, : 264.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[60]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
A. Sczyrba, et al., “Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software”, Nature Methods, vol. 14, 2017, pp. 1063-1071.
PUB | DOI | WoS | PubMed | Europe PMC
 
[59]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Y. Stolze, et al., “Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants”, Biotechnology for Biofuels, vol. 9, 2016, : 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[58]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
M. Lux, et al., “acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data”, BMC Bioinformatics, vol. 17, 2016, : 543.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[57]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904836
R. Heyer, et al., “Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type”, Biotechnology for Biofuels, vol. 9, 2016, : 155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[56]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
I. Maus, et al., “Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment”, Journal of Biotechnology, vol. 232, 2016, pp. 50-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[55]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
D. Wibberg, et al., “Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing”, Journal of Biotechnology, vol. 232, 2016, pp. 61-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[54]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902190
F. Stiefel, et al., “miRNA profiling of high, low and non-producing CHO cells during biphasic fed-batch cultivation reveals process relevant targets for host cell engineering”, Journal of Biotechnology, vol. 225, 2016, pp. 31-43.
PUB | DOI | WoS | PubMed | Europe PMC
 
[53]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901418
S.B. Campos, et al., “Soil suppressiveness and its relations with the microbial community in a Brazilian subtropical agroecosystem under different management systems”, Soil Biology and Biochemistry, vol. 96, 2016, pp. 191-197.
PUB | DOI | WoS
 
[52]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
A. Bremges, et al., “MeCorS: Metagenome-enabled error correction of single cell sequencing reads”, Bioinformatics, vol. 32, 2016, pp. 2199-2201.
PUB | DOI | WoS | PubMed | Europe PMC
 
[51]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900928
J. Nesme, et al., “Back to the future of soil metagenomics”, Frontiers in Microbiology, vol. 7, 2016, : 73.
PUB | DOI | WoS | PubMed | Europe PMC
 
[50]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675
T. Krahn, et al., “Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene.”, Antimicrobial Agents and Chemotherapy, vol. 60, 2016, pp. 3032-3040.
PUB | DOI | WoS | PubMed | Europe PMC
 
[49]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
I. Maus, et al., “Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates”, Biotechnology for Biofuels, vol. 9, 2016, : 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[48]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
V. Ortseifen, et al., “An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant”, Journal of Biotechnology, vol. 231, 2016, pp. 268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[47]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906
A. Bremges, et al., “Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant”, GigaScience, vol. 4, 2015, : 33.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[46]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
F. Kohrs, et al., “Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities”, Proteomics, vol. 15, 2015, pp. 3585-3589.
PUB | DOI | WoS | PubMed | Europe PMC
 
[45]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726183
E.K. Field, et al., “Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount”, The ISME journal, vol. 9, 2015, pp. 857-870.
PUB | DOI | WoS | PubMed | Europe PMC
 
[44]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501
P. Belmann, et al., “Bioboxes: standardised containers for interchangeable bioinformatics software”, GigaScience, vol. 4, 2015, : 47.
PUB | DOI | WoS | PubMed | Europe PMC
 
[43]
2015 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2901612
M. Lux, A. Sczyrba, and B. Hammer, “Automatic discovery of metagenomic structure”, 2015 International Joint Conference on Neural Networks (IJCNN), Institute of Electrical & Electronics Engineers (IEEE), 2015.
PUB | DOI
 
[42]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726156
B.G. Paul, et al., “Targeted diversity generation by intraterrestrial archaea and archaeal viruses”, Nature Communications, vol. 6, 2015, pp. 6585.
PUB | DOI | WoS | PubMed | Europe PMC
 
[41]
2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2901466
B. Osterholz, et al., “A Bioinformatics Pipeline for the Detection of β-lactamase Genes in Metagenome Sequence Data and its Application to Production-Scale Biogas Plants”, Presented at the 3rd International Symposium on the environmental Dimension of Antibiotic Resistance, Wernigerode, 2015.
PUB
 
[40]
2015 | Report | Veröffentlicht | PUB-ID: 2901613
M. Lux, B. Hammer, and A. Sczyrba, Automated Contamination Detection in Single-Cell Sequencing, Cold Spring Harbor Laboratory Press, 2015.
PUB | DOI
 
[39]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685992
H. Piao, et al., “Temporal dynamics of fibrolytic and methanogenic rumen microorganisms during in situ incubation of switchgrass determined by 16S rRNA gene profiling”, Frontiers in Microbiology, vol. 5, 2014.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
[38]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2654433
J. Kamke, et al., “The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features”, PLoS ONE, vol. 9, 2014, : e87353.
PUB | DOI | WoS | PubMed | Europe PMC
 
[37]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689051
T.W. Ghylin, et al., “Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage”, The ISME Journal, vol. 8, 2014, pp. 2503-2516.
PUB | DOI | WoS | PubMed | Europe PMC
 
[36]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2698163
R.A. Heins, et al., “Phylogenomically Guided Identification of Industrially Relevant GH1 β-Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry”, ACS chemical biology, vol. 9, 2014, pp. 2082-2091.
PUB | DOI | WoS | PubMed | Europe PMC
 
[35]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672695
B.K. Swan, et al., “Genomic and metabolic diversity of marine group I thaumarchaeota in the mesopelagic of two subtropical gyres”, PloS one, vol. 9, 2014, pp. 95380.
PUB | DOI | WoS | PubMed | Europe PMC
 
[34]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
B. Henrich, et al., “Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma”, PLoS ONE, vol. 9, 2014, pp. e92297.
PUB | DOI | WoS | PubMed | Europe PMC
 
[33]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
D. Wibberg, et al., “Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344”, Journal of biotechnology, vol. 175, 2014, pp. 67-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[32]
2013 | Konferenzbeitrag | PUB-ID: 2909357
A. Gisbrecht, et al., “Nonlinear dimensionality reduction for cluster identification in metagenomic samples”, IV, 2013, pp.174-179.
PUB
 
[31]
2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2623500
A. Gisbrecht, et al., “Nonlinear dimensionality reduction for cluster identification in metagenomic samples”, 17th International Conference on Information Visualisation IV 2013, E. Banissi, ed., 2013, pp.174-179.
PUB
 
[30]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613567
C. Rinke, et al., “Insights into the phylogeny and coding potential of microbial dark matter”, Nature, vol. 499, 2013, pp. 431-437.
PUB | DOI | WoS | PubMed | Europe PMC
 
[29]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563424
J.H. Campbell, et al., “UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota”, Proceedings of the National Academy of Sciences of the United States of America, vol. 110, 2013, pp. 5540-5545.
PUB | DOI | WoS | PubMed | Europe PMC
 
[28]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2638234
K. Zaremba-Niedzwiedzka, et al., “Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade”, Genome biology, vol. 14, 2013, pp. R130.
PUB | DOI | WoS | PubMed | Europe PMC
 
[27]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641352
J. Kamke, et al., “Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges”, The ISME journal, vol. 7, 2013, pp. 2287-2300.
PUB | DOI | WoS | PubMed | Europe PMC
 
[26]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563543
A.G. Campbell, et al., “Multiple Single-Cell Genomes Provide Insight into Functions of Uncultured Deltaproteobacteria in the Human Oral Cavity”, PLoS ONE, vol. 8, 2013, : e59361.
PUB | DOI | WoS | PubMed | Europe PMC
 
[25]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613623
B.K. Swan, et al., “Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean”, Proceedings of the National Academy of Sciences of the United States of America, vol. 110, 2013, pp. 11463-11468.
PUB | DOI | WoS | PubMed | Europe PMC
 
[24]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2518330
S.L. Garcia, et al., “Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton”, The ISME journal, vol. 7, 2012, pp. 137-147.
PUB | DOI | WoS | PubMed | Europe PMC
 
[23]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2547307
M. El-Kalioby, et al., “Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package”, BMC Bioinformatics, vol. 13, 2012, pp. S22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[22]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2329885
B.K. Swan, et al., “Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean”, Science, vol. 333, 2011, pp. 1296-1300.
PUB | DOI | WoS | PubMed | Europe PMC
 
[21]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2351462
T.-W. Kim, et al., “High-Throughput In Vitro Glycoside Hydrolase (HIGH) Screening for Enzyme Discovery”, Angewandte Chemie, vol. 123, 2011, pp. 11411-11414.
PUB | DOI | PubMed | Europe PMC
 
[20]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2789582
C.M. Sales, et al., “Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190”, Journal of Bacteriology, vol. 193, 2011, pp. 4549-4550.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | GenBank
 
[19]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410148
T. Woyke, et al., “Decontamination of MDA Reagents for Single Cell Whole Genome Amplification”, PLoS ONE, vol. 6, 2011, pp. e26161.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991643
M. Hess, et al., “Metagenomic discovery of biomass-degrading genes and genomes from cow rumen”, Science, vol. 331, 2011, pp. 463-467.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991615
J.A. Gilbert, et al., “Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project”, Stand Genomic Sci, vol. 3, 2010, pp. 243-248.
PUB | DOI | PubMed | Europe PMC
 
[16]
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784020
A.-L. Lamprecht, et al., “GeneFisher-P: variations of GeneFisher as processes in Bio-jETI”, BMC Bioinformatics, vol. 9, 2008, pp. S13.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[15]
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588303
A. Sczyrba, S. Konermann, and R. Giegerich, “Two interactive bioinformatics courses at the bielefeld university bioinformatics server”, BRIEFINGS IN BIOINFORMATICS, vol. 9, 2008, pp. 243-249.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599756
M. Spitzer, et al., “IsoSVM - Distinguishing isoforms and paralogs on the protein level”, BMC Bioinformatics, vol. 7, 2006, pp. 110.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[13]
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773613
A. Sczyrba, et al., “XenDB: Full length cDNA prediction and cross species mapping in Xenopus laevis”, BMC Genomics, vol. 6, 2005, pp. 123.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383529
M. Beckstette, et al., “Genlight: Interactive high-throughput sequence analysis and comparative genomics”, Journal of Integrative Bioinformatics, vol. 1, 2004, pp. 0008.
PUB | DOI
 
[11]
2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2383536
M. Beckstette, A. Sczyrba, and P.M. Selzer, “Genlight: Interactive high-throughput sequence analysis and comparative genomics”, Proceedings of the German Conference on Bioinformatics, Lecture Notes in Informatics: GI, 2004, pp.179-186.
PUB
 
[10]
2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2383561
A. Sczyrba, et al., “Identification of 10,500 Xenopus laevis Full Length Clones through EST Clustering and Sequence Analysis”, Proceedings of the German Conference on Bioinformatics, Lecture Notes in Informatics: GI, 2004.
PUB
 
[9]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607400
L. Taher, et al., “AGenDA: gene prediction by cross-species sequence comparison”, Nucleic Acids Research, vol. 32, 2004, pp. W305-W308.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[8]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607394
J. Krüger, et al., “e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences”, NUCLEIC ACIDS RESEARCH, vol. 32, 2004, pp. W301-W304.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[7]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260
M. Dondrup, et al., “EMMA: a platform for consistent storage and efficient analysis of microarray data”, JOURNAL OF BIOTECHNOLOGY, vol. 106, 2003, pp. 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612470
B. Morgenstern, et al., “AltAVisT: Comparing alternative multiple sequence alignments”, BIOINFORMATICS, vol. 19, 2003, pp. 425-426.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773844
A. Sczyrba, et al., “RNA-related tools on the Bielefeld Bioinformatics Server”, Nucleic Acids Research, vol. 31, 2003, pp. 3767-3770.
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
[4]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610494
L. Taher, et al., “AGenDA: homology-based gene prediction”, BIOINFORMATICS, vol. 19, 2003, pp. 1575-1577.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897716
S. Gopal, et al., “Homology-based annotation yields 1,042 new candidate genes in the Drosophila melanogaster genome”, Nat Genet, vol. 27, 2001, pp. 337-340.
PUB
 
[2]
2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616752
C.R. Altmann, et al., “Microarray-based analysis of early development in Xenopus laevis”, DEVELOPMENTAL BIOLOGY, vol. 236, 2001, pp. 64-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
[1]
2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897767
T. Gaasterland, et al., “MAGPIE/EGRET annotation of the 2.9-Mb Drosophila melanogaster Adh region”, Genome Res, vol. 10, 2000, pp. 502-510.
PUB
 

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75 Publikationen

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[75]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
J. Nelkner, et al., “Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes”, Genes, vol. 10, 2019, : 424.
PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
 
[74]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
H. Pankoke, et al., “F5Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota.”, FEMS microbiology letters, 2019.
PUB | DOI | PubMed | Europe PMC
 
[73]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933767
A. Fritz, et al., “CAMISIM: simulating metagenomes and microbial communities”, Microbiome, vol. 7, 2019, : 17.
PUB | DOI | WoS | PubMed | Europe PMC
 
[72]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Y. Stolze, et al., “Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants”, Microbial Biotechnology, vol. 11, 2018, pp. 667-679.
PUB | DOI | WoS | PubMed | Europe PMC
 
[71]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777
J.S. Celis, et al., “Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts”, GigaScience, vol. 7, 2018, : giy075.
PUB | DOI | WoS | PubMed | Europe PMC
 
[70]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920723
F. Meyer, et al., “AMBER: Assessment of Metagenome BinnERs”, GigaScience, 2018, : giy069.
PUB | DOI | WoS | PubMed | Europe PMC
 
[69]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930593
M. Linden, et al., “Common ELIXIR Service for Researcher Authentication and Authorisation”, F1000Research, vol. 7, 2018, : 1199.
PUB | DOI | Download (ext.) | PubMed | Europe PMC
 
[68]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
L. Huang, J. Krüger, and A. Sczyrba, “Analyzing large scale genomic data on the cloud with Sparkhit”, Bioinformatics, vol. 34, 2018, pp. 1457-1465.
PUB | DOI | WoS | PubMed | Europe PMC
 
[67]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
I. Maus, et al., “Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors”, Biotechnology for Biofuels, vol. 11, 2018, : 167.
PUB | DOI | WoS | PubMed | Europe PMC
 
[66]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918275
E.J. Fleming, et al., “Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea”, Applied and Environmental Microbiology, vol. 84, 2018, : e02239-17.
PUB | DOI | WoS | PubMed | Europe PMC
 
[65]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914959
P. da Schoren Costa, et al., “Invasion ecology applied to inoculation of plant growth promoting bacteria through a novel SIMPER-PCA approach”, Plant and Soil, vol. 422, 2018, pp. 467-478.
PUB | DOI | WoS
 
[64]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909153
J. Yu, et al., “Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism”, Journal of Biotechnology, vol. 257, 2017, pp. 58-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[63]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
S. Jünemann, et al., “Bioinformatics for NGS-based metagenomics and the application to biogas research”, Journal of Biotechnology, vol. 261, 2017, pp. 10-23.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
[62]
2017 | Datenpublikation | PUB-ID: 2914921
L. Huang, J. Krüger, and A. Sczyrba, Sparkhit evaluation data set. Bielefeld University, 2017. doi:10.4119/unibi/2914921.
PUB | Dateien verfügbar | DOI
 
[61]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516
I. Maus, et al., “Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes”, Biotechnology for Biofuels, vol. 10, 2017, : 264.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[60]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
A. Sczyrba, et al., “Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software”, Nature Methods, vol. 14, 2017, pp. 1063-1071.
PUB | DOI | WoS | PubMed | Europe PMC
 
[59]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Y. Stolze, et al., “Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants”, Biotechnology for Biofuels, vol. 9, 2016, : 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[58]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
M. Lux, et al., “acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data”, BMC Bioinformatics, vol. 17, 2016, : 543.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[57]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904836
R. Heyer, et al., “Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type”, Biotechnology for Biofuels, vol. 9, 2016, : 155.
PUB | DOI | WoS | PubMed | Europe PMC
 
[56]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
I. Maus, et al., “Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment”, Journal of Biotechnology, vol. 232, 2016, pp. 50-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[55]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
D. Wibberg, et al., “Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing”, Journal of Biotechnology, vol. 232, 2016, pp. 61-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[54]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902190
F. Stiefel, et al., “miRNA profiling of high, low and non-producing CHO cells during biphasic fed-batch cultivation reveals process relevant targets for host cell engineering”, Journal of Biotechnology, vol. 225, 2016, pp. 31-43.
PUB | DOI | WoS | PubMed | Europe PMC
 
[53]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901418
S.B. Campos, et al., “Soil suppressiveness and its relations with the microbial community in a Brazilian subtropical agroecosystem under different management systems”, Soil Biology and Biochemistry, vol. 96, 2016, pp. 191-197.
PUB | DOI | WoS
 
[52]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
A. Bremges, et al., “MeCorS: Metagenome-enabled error correction of single cell sequencing reads”, Bioinformatics, vol. 32, 2016, pp. 2199-2201.
PUB | DOI | WoS | PubMed | Europe PMC
 
[51]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900928
J. Nesme, et al., “Back to the future of soil metagenomics”, Frontiers in Microbiology, vol. 7, 2016, : 73.
PUB | DOI | WoS | PubMed | Europe PMC
 
[50]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675
T. Krahn, et al., “Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene.”, Antimicrobial Agents and Chemotherapy, vol. 60, 2016, pp. 3032-3040.
PUB | DOI | WoS | PubMed | Europe PMC
 
[49]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
I. Maus, et al., “Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates”, Biotechnology for Biofuels, vol. 9, 2016, : 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[48]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
V. Ortseifen, et al., “An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant”, Journal of Biotechnology, vol. 231, 2016, pp. 268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[47]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906
A. Bremges, et al., “Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant”, GigaScience, vol. 4, 2015, : 33.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[46]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
F. Kohrs, et al., “Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities”, Proteomics, vol. 15, 2015, pp. 3585-3589.
PUB | DOI | WoS | PubMed | Europe PMC
 
[45]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726183
E.K. Field, et al., “Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount”, The ISME journal, vol. 9, 2015, pp. 857-870.
PUB | DOI | WoS | PubMed | Europe PMC
 
[44]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501
P. Belmann, et al., “Bioboxes: standardised containers for interchangeable bioinformatics software”, GigaScience, vol. 4, 2015, : 47.
PUB | DOI | WoS | PubMed | Europe PMC
 
[43]
2015 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2901612
M. Lux, A. Sczyrba, and B. Hammer, “Automatic discovery of metagenomic structure”, 2015 International Joint Conference on Neural Networks (IJCNN), Institute of Electrical & Electronics Engineers (IEEE), 2015.
PUB | DOI
 
[42]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726156
B.G. Paul, et al., “Targeted diversity generation by intraterrestrial archaea and archaeal viruses”, Nature Communications, vol. 6, 2015, pp. 6585.
PUB | DOI | WoS | PubMed | Europe PMC
 
[41]
2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2901466
B. Osterholz, et al., “A Bioinformatics Pipeline for the Detection of β-lactamase Genes in Metagenome Sequence Data and its Application to Production-Scale Biogas Plants”, Presented at the 3rd International Symposium on the environmental Dimension of Antibiotic Resistance, Wernigerode, 2015.
PUB
 
[40]
2015 | Report | Veröffentlicht | PUB-ID: 2901613
M. Lux, B. Hammer, and A. Sczyrba, Automated Contamination Detection in Single-Cell Sequencing, Cold Spring Harbor Laboratory Press, 2015.
PUB | DOI
 
[39]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685992
H. Piao, et al., “Temporal dynamics of fibrolytic and methanogenic rumen microorganisms during in situ incubation of switchgrass determined by 16S rRNA gene profiling”, Frontiers in Microbiology, vol. 5, 2014.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
[38]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2654433
J. Kamke, et al., “The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features”, PLoS ONE, vol. 9, 2014, : e87353.
PUB | DOI | WoS | PubMed | Europe PMC
 
[37]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689051
T.W. Ghylin, et al., “Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage”, The ISME Journal, vol. 8, 2014, pp. 2503-2516.
PUB | DOI | WoS | PubMed | Europe PMC
 
[36]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2698163
R.A. Heins, et al., “Phylogenomically Guided Identification of Industrially Relevant GH1 β-Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry”, ACS chemical biology, vol. 9, 2014, pp. 2082-2091.
PUB | DOI | WoS | PubMed | Europe PMC
 
[35]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672695
B.K. Swan, et al., “Genomic and metabolic diversity of marine group I thaumarchaeota in the mesopelagic of two subtropical gyres”, PloS one, vol. 9, 2014, pp. 95380.
PUB | DOI | WoS | PubMed | Europe PMC
 
[34]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
B. Henrich, et al., “Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma”, PLoS ONE, vol. 9, 2014, pp. e92297.
PUB | DOI | WoS | PubMed | Europe PMC
 
[33]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
D. Wibberg, et al., “Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344”, Journal of biotechnology, vol. 175, 2014, pp. 67-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[32]
2013 | Konferenzbeitrag | PUB-ID: 2909357
A. Gisbrecht, et al., “Nonlinear dimensionality reduction for cluster identification in metagenomic samples”, IV, 2013, pp.174-179.
PUB
 
[31]
2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2623500
A. Gisbrecht, et al., “Nonlinear dimensionality reduction for cluster identification in metagenomic samples”, 17th International Conference on Information Visualisation IV 2013, E. Banissi, ed., 2013, pp.174-179.
PUB
 
[30]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613567
C. Rinke, et al., “Insights into the phylogeny and coding potential of microbial dark matter”, Nature, vol. 499, 2013, pp. 431-437.
PUB | DOI | WoS | PubMed | Europe PMC
 
[29]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563424
J.H. Campbell, et al., “UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota”, Proceedings of the National Academy of Sciences of the United States of America, vol. 110, 2013, pp. 5540-5545.
PUB | DOI | WoS | PubMed | Europe PMC
 
[28]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2638234
K. Zaremba-Niedzwiedzka, et al., “Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade”, Genome biology, vol. 14, 2013, pp. R130.
PUB | DOI | WoS | PubMed | Europe PMC
 
[27]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641352
J. Kamke, et al., “Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges”, The ISME journal, vol. 7, 2013, pp. 2287-2300.
PUB | DOI | WoS | PubMed | Europe PMC
 
[26]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563543
A.G. Campbell, et al., “Multiple Single-Cell Genomes Provide Insight into Functions of Uncultured Deltaproteobacteria in the Human Oral Cavity”, PLoS ONE, vol. 8, 2013, : e59361.
PUB | DOI | WoS | PubMed | Europe PMC
 
[25]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613623
B.K. Swan, et al., “Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean”, Proceedings of the National Academy of Sciences of the United States of America, vol. 110, 2013, pp. 11463-11468.
PUB | DOI | WoS | PubMed | Europe PMC
 
[24]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2518330
S.L. Garcia, et al., “Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton”, The ISME journal, vol. 7, 2012, pp. 137-147.
PUB | DOI | WoS | PubMed | Europe PMC
 
[23]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2547307
M. El-Kalioby, et al., “Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package”, BMC Bioinformatics, vol. 13, 2012, pp. S22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[22]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2329885
B.K. Swan, et al., “Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean”, Science, vol. 333, 2011, pp. 1296-1300.
PUB | DOI | WoS | PubMed | Europe PMC
 
[21]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2351462
T.-W. Kim, et al., “High-Throughput In Vitro Glycoside Hydrolase (HIGH) Screening for Enzyme Discovery”, Angewandte Chemie, vol. 123, 2011, pp. 11411-11414.
PUB | DOI | PubMed | Europe PMC
 
[20]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2789582
C.M. Sales, et al., “Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190”, Journal of Bacteriology, vol. 193, 2011, pp. 4549-4550.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | GenBank
 
[19]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410148
T. Woyke, et al., “Decontamination of MDA Reagents for Single Cell Whole Genome Amplification”, PLoS ONE, vol. 6, 2011, pp. e26161.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991643
M. Hess, et al., “Metagenomic discovery of biomass-degrading genes and genomes from cow rumen”, Science, vol. 331, 2011, pp. 463-467.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991615
J.A. Gilbert, et al., “Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project”, Stand Genomic Sci, vol. 3, 2010, pp. 243-248.
PUB | DOI | PubMed | Europe PMC
 
[16]
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784020
A.-L. Lamprecht, et al., “GeneFisher-P: variations of GeneFisher as processes in Bio-jETI”, BMC Bioinformatics, vol. 9, 2008, pp. S13.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[15]
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588303
A. Sczyrba, S. Konermann, and R. Giegerich, “Two interactive bioinformatics courses at the bielefeld university bioinformatics server”, BRIEFINGS IN BIOINFORMATICS, vol. 9, 2008, pp. 243-249.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599756
M. Spitzer, et al., “IsoSVM - Distinguishing isoforms and paralogs on the protein level”, BMC Bioinformatics, vol. 7, 2006, pp. 110.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[13]
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773613
A. Sczyrba, et al., “XenDB: Full length cDNA prediction and cross species mapping in Xenopus laevis”, BMC Genomics, vol. 6, 2005, pp. 123.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383529
M. Beckstette, et al., “Genlight: Interactive high-throughput sequence analysis and comparative genomics”, Journal of Integrative Bioinformatics, vol. 1, 2004, pp. 0008.
PUB | DOI
 
[11]
2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2383536
M. Beckstette, A. Sczyrba, and P.M. Selzer, “Genlight: Interactive high-throughput sequence analysis and comparative genomics”, Proceedings of the German Conference on Bioinformatics, Lecture Notes in Informatics: GI, 2004, pp.179-186.
PUB
 
[10]
2004 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2383561
A. Sczyrba, et al., “Identification of 10,500 Xenopus laevis Full Length Clones through EST Clustering and Sequence Analysis”, Proceedings of the German Conference on Bioinformatics, Lecture Notes in Informatics: GI, 2004.
PUB
 
[9]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607400
L. Taher, et al., “AGenDA: gene prediction by cross-species sequence comparison”, Nucleic Acids Research, vol. 32, 2004, pp. W305-W308.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[8]
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607394
J. Krüger, et al., “e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences”, NUCLEIC ACIDS RESEARCH, vol. 32, 2004, pp. W301-W304.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[7]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260
M. Dondrup, et al., “EMMA: a platform for consistent storage and efficient analysis of microarray data”, JOURNAL OF BIOTECHNOLOGY, vol. 106, 2003, pp. 135-146.
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612470
B. Morgenstern, et al., “AltAVisT: Comparing alternative multiple sequence alignments”, BIOINFORMATICS, vol. 19, 2003, pp. 425-426.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773844
A. Sczyrba, et al., “RNA-related tools on the Bielefeld Bioinformatics Server”, Nucleic Acids Research, vol. 31, 2003, pp. 3767-3770.
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
[4]
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610494
L. Taher, et al., “AGenDA: homology-based gene prediction”, BIOINFORMATICS, vol. 19, 2003, pp. 1575-1577.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897716
S. Gopal, et al., “Homology-based annotation yields 1,042 new candidate genes in the Drosophila melanogaster genome”, Nat Genet, vol. 27, 2001, pp. 337-340.
PUB
 
[2]
2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616752
C.R. Altmann, et al., “Microarray-based analysis of early development in Xenopus laevis”, DEVELOPMENTAL BIOLOGY, vol. 236, 2001, pp. 64-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
[1]
2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897767
T. Gaasterland, et al., “MAGPIE/EGRET annotation of the 2.9-Mb Drosophila melanogaster Adh region”, Genome Res, vol. 10, 2000, pp. 502-510.
PUB
 

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