Alexander Sczyrba

asczyrba@techfak.uni-bielefeld.de
ORCID logo https://orcid.org/0000-0002-4405-3847

PEVZ-ID
17894

107 Publikationen

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  • [107]
    2024 | Preprint | Veröffentlicht | PUB-ID: 2993878
    Belmann, P., et al., 2024. Metagenomics-Toolkit: The Flexible and Efficient Cloud-Based Metagenomics Workflow featuring Machine Learning-Enabled Resource Allocation. bioRxiv.
    PUB | DOI
     
  • [106]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985402
    Heyer, R., et al., 2024. Breakdown of hardly degradable carbohydrates (lignocellulose) in a two-stage anaerobic digestion plant is favored in the main fermenter. Water Research, 250: 121020.
    PUB | DOI
     
  • [105]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2977923 OA
    Nelkner, J., et al., 2023. Abundance, classification and genetic potential of Thaumarchaeota in metagenomes of European agricultural soils: a meta-analysis. Environmental Microbiome, 18(1): 26.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [104]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2983209 OA
    Hassa, J., et al., 2023. Uncovering Microbiome Adaptations in a Full-Scale Biogas Plant: Insights from MAG-Centric Metagenomics and Metaproteomics. Microorganisms, 11(10): 2412.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [103]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984553
    Schimmler, S., et al., 2023. Base4NFDI - Basic Services for NFDI. Proceedings of the Conference on Research Data Infrastructure, 1.
    PUB | DOI
     
  • [102]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984552
    Hoffmann, N., et al., 2023. Embedding the de.NBI Cloud in the National Research Data Infrastructure Activities. Proceedings of the Conference on Research Data Infrastructure, 1.
    PUB | DOI
     
  • [101]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2984551
    Förstner, K.U., et al., 2023. NFDI4Microbiota – national research data infrastructure for microbiota research. Research Ideas and Outcomes, 9.
    PUB | DOI
     
  • [100]
    2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2979860
    Wolf, M., et al., 2023. Advances in the clinical use of metaproteomics. Expert review of proteomics.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [99]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2968667
    Olo Ndela, E., et al., 2023. Reekeekee- and roodoodooviruses, two different Microviridae clades constituted by the smallest DNA phages. Virus Evolution , 9(1): veac123.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [98]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969509
    Neri, U., et al., 2022. Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell, 185(21), p 4023-4037.e18.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [97]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2969511
    Fremin, B.J., et al., 2022. Thousands of small, novel genes predicted in global phage genomes. Cell Reports, 39(12): 110984.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [96]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967098
    Khesali Aghtaei, H., et al., 2022. Adaptation of a microbial community to demand-oriented biological methanation. Biotechnology for Biofuels and Bioproducts, 15(1): 125.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [95]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966901 OA
    Maus, I., et al., 2022. The novel oligopeptide utilizing species Anaeropeptidivorans aminofermentans M3/9T, its role in anaerobic digestion and occurrence as deduced from large-scale fragment recruitment analyses. Frontiers in Microbiology, 13: 1032515.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [94]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966286 OA
    Joshi, A., et al., 2022. Effect of Growth Media on the Diversity of Neocallimastigomycetes from Non-Rumen Habitats. Microorganisms, 10(10): 1972.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [93]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965465 OA
    Young, D., et al., 2022. Simultaneous Metabarcoding and Quantification of Neocallimastigomycetes from Environmental Samples: Insights into Community Composition and Novel Lineages. Microorganisms, 10(9): 1749.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [92]
    2022 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2963745 OA
    A. Sczyrba & German Network for Bioinformatics Infrastructure (de.NBI), eds., 2022. Development and Operation of the Federated de.NBI Cloud: Contributions of the German Network for Bioinformatics Infrastructure, Bielefeld: Center for Biotechnology, de.NBI Administration Office.
    PUB | PDF | DOI
     
  • [91]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962388
    Meyer, F., et al., 2022. Critical Assessment of Metagenome Interpretation: the second round of challenges. Nature Methods, 19, p 429-440.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
     
  • [90]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950292 OA
    Blifernez-Klassen, O., et al., 2021. Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia. Scientific Reports, 11(1): 1726.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
     
  • [89]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501 OA
    Brandt, D., et al., 2021. Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines. Viruses, 13(9): 1870.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [88]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956369
    Fritz, A., et al., 2021. Haploflow: strain-resolved de novo assembly of viral genomes. Genome Biology, 22(1): 212.
    PUB | DOI | WoS | PubMed | Europe PMC | Preprint
     
  • [87]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2960171
    Van Den Bossche, T., et al., 2021. Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows. Nature Communications, 12(1): 7305.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [86]
    2021 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2960900
    Leitner, F., et al., 2021. EOSC-Life Report on the work of the initial demonstrators.
    PUB | DOI
     
  • [85]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2955512
    Aevarsson, A., et al., 2021. Going to extremes - a metagenomic journey into the dark matter of life. FEMS microbiology letters, : fnab067.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [84]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952275
    Meyer, F., et al., 2021. Tutorial: assessing metagenomics software with the CAMI benchmarking toolkit. Nature Protocols, 16(4), p 1785–1801.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [83]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951537 OA
    Tabacchioni, S., et al., 2021. Identification of Beneficial Microbial Consortia and Bioactive Compounds with Potential as Plant Biostimulants for a Sustainable Agriculture. Microorganisms, 9(2): 426.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [82]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941645 OA
    Maus, I., et al., 2020. Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics. Environmental Microbiome, 15(1): 7.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [81]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953267
    Schulte-Schrepping, J., et al., 2020. Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment. Cell, 182(6), p 1419-1440.e23.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [80]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944226 OA
    Rettenmaier, R., et al., 2020. Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum. Microorganisms, 8(6): 915.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [79]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949597 OA
    Maus, I., et al., 2020. The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses. Microorganisms, 8(12): 2024.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [78]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948401 OA
    Moore, M., et al., 2020. ConCysFind: a pipeline tool to predict conserved amino acids of protein sequences across the plant kingdom. BMC Bioinformatics, 21(1): 490.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [77]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941704
    Lesker, T.R., et al., 2020. An Integrated Metagenome Catalog Reveals New Insights into the Murine Gut Microbiome. Cell reports, 30(9), p 2909-2922.e6.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [76]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923 OA
    Nelkner, J., et al., 2019. Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes. Genes, 10(6): 424.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [75]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933767
    Fritz, A., et al., 2019. CAMISIM: simulating metagenomes and microbial communities. Microbiome, 7(1): 17.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [74]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
    Pankoke, H., et al., 2019. Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota. FEMS microbiology letters.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [73]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936223 OA
    Belmann, P., et al., 2019. de.NBI Cloud federation through ELIXIR AAI. F1000Research, 8: 842.
    PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
     
  • [72]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930593
    Linden, M., et al., 2018. Common ELIXIR Service for Researcher Authentication and Authorisation. F1000Research, 7: 1199.
    PUB | DOI | Download (ext.) | PubMed | Europe PMC
     
  • [71]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920723
    Meyer, F., et al., 2018. AMBER: Assessment of Metagenome BinnERs. GigaScience, 7(6): giy069.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [70]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777
    Celis, J.S., et al., 2018. Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts. GigaScience, 7(7): giy075.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [69]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
    Maus, I., et al., 2018. Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors. Biotechnology for Biofuels, 11(1): 167.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [68]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
    Huang, L., Krüger, J., & Sczyrba, A., 2018. Analyzing large scale genomic data on the cloud with Sparkhit. Bioinformatics, 34(9), p 1457-1465.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [67]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
    Stolze, Y., et al., 2018. Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microbial Biotechnology, 11(4), p 667-679.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [66]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914959
    da Schoren Costa, P., et al., 2018. Invasion ecology applied to inoculation of plant growth promoting bacteria through a novel SIMPER-PCA approach. Plant and Soil, 422(1-2), p 467-478.
    PUB | DOI | WoS
     
  • [65]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918275
    Fleming, E.J., et al., 2018. Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea. Applied and Environmental Microbiology, 84(9): e02239-17.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [64]
    2017 | Zeitschriftenaufsatz | PUB-ID: 2913876
    Sczyrba, A., et al., 2017. Benchmark data sets, software results and reference data for the first CAMI challenge. GigaScience Database.
    PUB | DOI
     
  • [63]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
    Sczyrba, A., et al., 2017. Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods, 14(11), p 1063-1071.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [62]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909153 OA
    Yu, J., et al., 2017. Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism. Journal of Biotechnology, 257, p 58-60.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [61]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516 OA
    Maus, I., et al., 2017. Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes. Biotechnology for Biofuels, 10(1): 264.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [60]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
    Jünemann, S., et al., 2017. Bioinformatics for NGS-based metagenomics and the application to biogas research. Journal of Biotechnology, 261(SI), p 10-23.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [59]
    2017 | Datenpublikation | PUB-ID: 2914921 OA
    Huang, L., Krüger, J., & Sczyrba, A., 2017. Sparkhit evaluation data set, Bielefeld University.
    PUB | Dateien verfügbar | DOI
     
  • [58]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904836
    Heyer, R., et al., 2016. Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type. Biotechnology for Biofuels, 9(1): 155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [57]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
    Maus, I., et al., 2016. Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates. Biotechnology for Biofuels, 9(1): 171.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [56]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
    Bremges, A., et al., 2016. MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics, 32(14), p 2199-2201.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [55]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900928
    Nesme, J., et al., 2016. Back to the future of soil metagenomics. Frontiers in Microbiology, 7: 73.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [54]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815 OA
    Stolze, Y., et al., 2016. Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels, 9(1): 156.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [53]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633 OA
    Lux, M., et al., 2016. acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data. BMC Bioinformatics, 17(1): 543.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [52]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
    Maus, I., et al., 2016. Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology, 232, p 50-60.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [51]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
    Wibberg, D., et al., 2016. Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology, 232, p 61-68.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [50]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901418
    Campos, S.B., et al., 2016. Soil suppressiveness and its relations with the microbial community in a Brazilian subtropical agroecosystem under different management systems. Soil Biology and Biochemistry, 96, p 191-197.
    PUB | DOI | WoS
     
  • [49]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902190
    Stiefel, F., et al., 2016. miRNA profiling of high, low and non-producing CHO cells during biphasic fed-batch cultivation reveals process relevant targets for host cell engineering. Journal of Biotechnology, 225, p 31-43.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [48]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675
    Krahn, T., et al., 2016. Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene. Antimicrobial Agents and Chemotherapy, 60(5), p 3032-3040.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [47]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
    Ortseifen, V., et al., 2016. An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant. Journal of Biotechnology, 231, p 268-279.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [46]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906 OA
    Bremges, A., et al., 2015. Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant. GigaScience, 4(1): 33.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [45]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501
    Belmann, P., et al., 2015. Bioboxes: standardised containers for interchangeable bioinformatics software. GigaScience, 4(1): 47.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [44]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726156
    Paul, B.G., et al., 2015. Targeted diversity generation by intraterrestrial archaea and archaeal viruses. Nature Communications, 6(1): 6585.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [43]
    2015 | Preprint | Veröffentlicht | PUB-ID: 2901613
    Lux, M., Hammer, B., & Sczyrba, A., 2015. Automated Contamination Detection in Single-Cell Sequencing. bioRxiv.
    PUB
     
  • [42]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
    Kohrs, F., et al., 2015. Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities. Proteomics, 15(20), p 3585-3589.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [41]
    2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2901466
    Osterholz, B., et al., 2015. A Bioinformatics Pipeline for the Detection of β-lactamase Genes in Metagenome Sequence Data and its Application to Production-Scale Biogas Plants. Presented at the 3rd International Symposium on the environmental Dimension of Antibiotic Resistance, Wernigerode.
    PUB
     
  • [40]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726183
    Field, E.K., et al., 2015. Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount. The ISME journal, 9(4), p 857-870.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [39]
    2015 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2901612
    Lux, M., Sczyrba, A., & Hammer, B., 2015. Automatic discovery of metagenomic structure. In 2015 International Joint Conference on Neural Networks (IJCNN). Institute of Electrical & Electronics Engineers (IEEE).
    PUB | DOI
     
  • [38]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685992
    Piao, H., et al., 2014. Temporal dynamics of fibrolytic and methanogenic rumen microorganisms during in situ incubation of switchgrass determined by 16S rRNA gene profiling. Frontiers in Microbiology, 5(307), p 307.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [37]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2698163
    Heins, R.A., et al., 2014. Phylogenomically Guided Identification of Industrially Relevant GH1 β-Glucosidases through DNA Synthesis and Nanostructure-Initiator Mass Spectrometry. ACS chemical biology, 9(9), p 2082-2091.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [36]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2654433
    Kamke, J., et al., 2014. The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features. PLoS ONE, 9(1): e87353.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [35]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689051
    Ghylin, T.W., et al., 2014. Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage. The ISME Journal, 8(12), p 2503-2516.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [34]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672695
    Swan, B.K., et al., 2014. Genomic and metabolic diversity of marine group I thaumarchaeota in the mesopelagic of two subtropical gyres. PloS one, 9(4): e95380.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [33]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
    Henrich, B., et al., 2014. Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma. PLoS ONE, 9(3): e92297.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [32]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
    Wibberg, D., et al., 2014. Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Journal of biotechnology, 175, p 67-68.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [31]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2638234
    Zaremba-Niedzwiedzka, K., et al., 2013. Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade. Genome biology, 14(11): R130.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613567
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563543
    Campbell, A.G., et al., 2013. Multiple Single-Cell Genomes Provide Insight into Functions of Uncultured Deltaproteobacteria in the Human Oral Cavity. PLoS ONE, 8(3): e59361.
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563424
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641352
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613623
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2518330
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410148
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2351462
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2329885
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2789582
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991643
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    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1991615
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588303
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    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599756 OA
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    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773613 OA
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    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383529 OA
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    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607400 OA
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    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610494
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    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773844 OA
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    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612470
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    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609260
    Dondrup, M., et al., 2003. EMMA: a platform for consistent storage and efficient analysis of microarray data. JOURNAL OF BIOTECHNOLOGY, 106(2-3), p 135-146.
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    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897716
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    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1616752
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    2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897767
    Gaasterland, T., et al., 2000. MAGPIE/EGRET annotation of the 2.9-Mb Drosophila melanogaster Adh region. Genome Res, 10(4), p 502-510.
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