PUB - Publikationen an der Universität Bielefeld

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• [44]
  

  2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912

  Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana
  Rubiano Castellanos CC, Merkle T, Nattkemper TW (In Press)
  Presented at the BIOINFORMATICS Conf., Barcelona, Spain.

  PUB
   
• [43]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1994730

  Nucleo-cytoplasmic transport of proteins and RNA in plants
  Merkle T (2011)
  Plant Cell Reports 30(2): 153-176.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [42]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379960

  The plant-specific family of DNA-binding proteins containing three HMG-box domains interacts with mitotic and meiotic chromosomes
  Pedersen DS, Coppens F, Ma L, Antosch M, Marktl B, Merkle T, Beemster GT, Houben A, Grasser KD (2011)
  New Phytologist 192(3): 577-589.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [41]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375640

  Unexpected mobility of plant chromatin-associated HMGB proteins
  Merkle T, Grasser KD (2011)
  Plant Signaling & Behavior 6(6): 878-880.

  PUB | DOI | PubMed | Europe PMC
   
• [40]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996275

  Improvement of the design and generation of highly specific plant knockdown lines using primary synthetic microRNAs (pri-smiRNAs)
  Niemeier S, Alves jun. L, Merkle T (2010)
  BMC Research Notes 3(1): 59.

  PUB | DOI | Download (ext.) | PubMed | Europe PMC
   
• [39]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968236

  Nucleocytoplasmic Distribution of the Arabidopsis Chromatin-Associated HMGB2/3 and HMGB4 Proteins
  Pedersen DS, Merkle T, Marktl B, Lildballe DL, Antosch M, Bergmann T, Tönsing K, Anselmetti D, Grasser KD (2010)
  Plant Physiology 154(4): 1831-1841.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [38]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539

  Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana
  Alves jun. L, Niemeier S, Hauenschild A, Rehmsmeier M, Merkle T (2009)
  Nucleic Acids Research 37(12): 4010-4021.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [37]
  

  2009 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1996271

  Nuclear Export of Proteins and RNA
  Merkle T (2009)
  In: Functional Organization of the Plant Nucleus. Meier I, Robinson DG (Eds); , 14. Berlin, Heidelberg: Springer: 55-57.

  PUB | DOI
   
• [36]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635243

  Transcript Elongation Factor TFIIS Is Involved in Arabidopsis Seed Dormancy
  Grasser M, Kane CM, Merkle T, Melzer M, Emmersen J, Grasser KD (2009)
  Journal of Molecular Biology 386(3): 598-611.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [35]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587614

  A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters
  Hanano S, Stracke R, Jakoby M, Merkle T, Domagalska MA, Weisshaar B, Davis SJ (2008)
  BMC Genomics 9(1): 182.

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [34]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636583

  A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains
  Hansen FT, Madsen CK, Nordland AM, Grasser M, Merkle T, Grasser KD (2008)
  Biochemistry 47(50): 13207-13214.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [33]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592809

  Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens
  Kiilerich B, Stemmer C, Merkle T, Launholt D, Gorr G, Grasser KD (2008)
  Gene 407(1-2): 86-97.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [32]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2316612

  Analysis of Subcellular Surface Structure, Function and Dynamics
  Anselmetti D, Hansmeier N, Kalinowski J, Martini J, Merkle T, Palmisano R, Ros R, Schmied K, Sischka A, Tönsing K (2007)
  Analytical and Bioanalytical Chemistry 387(1): 83-89.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [31]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593589

  Multifocal two-photon laser scanning microscopy combined with photo-activatable GFP for in vivo monitoring of intracellular protein dynamics in real time
  Martini J, Schmied K, Palmisano R, Tönsing K, Anselmetti D, Merkle T (2007)
  Journal of Structural Biology 158(3): 401-409.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [30]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595711

  Functionality of the beta/six site-specific recombination system in tobacco and Arabidopsis: A novel tool for genetic engineering of plant genomes
  Gronlund JT, Stemmer C, Lichota J, Merkle T, Grasser KD (2007)
  Plant Molecular Biology 63(4): 545-556.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [29]
  

  2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1946105

  Systems nanobiology: from quantitative single molecule biophysics to microfluidic-based single cell analysis
  Martini J, Hellmich W, Greif D, Becker A, Merkle T, Ros R, Ros A, Tönsing K, Anselmetti D (2007)
  In: Subcellular Proteomics. Faupel M, Bertrand E (Eds); , 43. Heidelberg: Springer: 301-321.

  PUB | PubMed | Europe PMC
   
• [28]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599537

  The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins
  Grasser M, Lentz A, Lichota J, Merkle T, Grasser KD (2006)
  Journal of Molecular Biology 358(3): 654-664.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [27]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596329

  Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus
  Launholt D, Merkle T, Houben A, Schulz A, Grasser KD (2006)
  The Plant Cell 18(11): 2904-2918.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [26]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598258

  Analysis of the subcellular localization, function, and proteolytic control of the Arabidopsis cyclin-dependent kinase inhibitor ICK1/KRP1
  Jakoby MJ, Weinl C, Pusch S, Kuijt SJH, Merkle T, Dissmeyer N, Schnittger A (2006)
  Plant Physiology 141(4): 1293-1305.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [25]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597619

  bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection
  Kaminaka H, Naeke C, Epple P, Dittgen J, Schuetze K, Chaban C, Holt BF, III, Merkle T, Schaefer E, Harter K, Dangl JL (2006)
  The EMBO JOURNAL 25(18): 4400-4411.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996224

  Nucleo-cytoplasmic shuttling of the beet necrotic yellow vein virus RNA-3-encoded p25 protein
  Vetter G, Hily J-M, Klein E, Schmidlin L, Haas M, Merkle T, Gilmer D (2004)
  The Journal of General Virology 85(8): 2459-2469.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [23]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996206

  HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein
  Grasser KD, Grill S, Duroux M, Launholt D, Thomsen MS, Nielsen BV, Nielsen HK, Merkle T (2004)
  Biochemistry 43(5): 1309-1314.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [22]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2439047

  Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7
  Ziemienowicz A, Haasen D, Staiger D, Merkle T (2003)
  Plant Molecular Biology 53(1/2): 201-212.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2003 | Zeitschriftenaufsatz | PUB-ID: 1867296

  Nucleo-cytoplasmic partitioning of proteins in plants: implications for the regulation of environmental and developmental signalling
  Merkle T (2003)
  Current Genetics 44(5): 231-260.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [20]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867297

  Characterisation of an Arabidopsis thaliana homologue of the nuclear export receptor CAS by its interaction with Importin alpha.
  Haasen D, Merkle T (2002)
  Plant Biology 4: 432-439.

  PUB
   
• [19]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867299

  Isolation and characterization of a Chlamydomonas gene that encodes a putative blue-light photoreceptor of the phototropin family.
  Huang K, Merkle T, Beck CF (2002)
  Plant Physiology 115(4): 613-622.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [18]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867302

  Regulated nuclear targeting of cauliflower mosaic virus
  Karsies A, Merkle T, Szurek B, Bonas U, Hohn T, Leclerc D (2002)
  Journal of General Virology 83(7): 1783-1790.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [17]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867312

  Nuclear import and export of proteins in plants: a tool for the regulation of signalling
  Merkle T (2001)
  Planta 213(4): 499-517.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [16]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867317

  Import of agrobacterium T-DNA into plant nuclei: two distinct functions of VirD2 and VirE2 proteins
  Ziemienowicz A, Merkle T, Schoumacher F, Hohn B, Rossi L (2001)
  The Plant Cell 13(2): 369-384.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867313

  Developmentally regulated expression of a cyclic nucleotide-gated ion channel from Arabidopsis indicates its involvement in programmed cell death
  Köhler C, Merkle T, Roby D, Neuhaus G (2001)
  Planta 213(3): 327-332.

  PUB | DOI | PubMed | Europe PMC
   
• [14]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867322

  DNA-interactions and nuclear localisation of the chromosomal HMG domain protein SSRP1 from maize.
  Röttgers K, Krohn NM, Lichota J, Stemmer C, Merkle T, Grasser KD (2000)
  The Plant Journal 23(3): 395-405.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867328

  Plant heterotrimeric G protein beta subunit is associated with membranes via protein interactions involving coiled-coil formation.
  Obrdlik P, Neuhaus G, Merkle T (2000)
  FEBS Letters 476(3): 208-212.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [12]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867331

  Isolaton and sequence analysis of a genomic clone of the nuclear export receptor AtXPO1 (AtCRM1) from Arabidopsis thaliana
  Haasen D, Neuhaus G, Merkle T (1999)
  Plant Physiology 121: 311-311.

  PUB
   
• [11]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867334

  Nuclear export of proteins in plants: AtXPO1 is the export receptor for leucine-rich nuclear export signals in Arabidopsis thaliana
  Haasen D, Köhler C, Neuhaus G, Merkle T (1999)
  The Plant Journal 20(6): 695-705.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [10]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867338

  Characterisation of a novel gene family of putative cyclic nucleotide- and calmodulin-regulated ion channels in Arabidopsis thaliana
  Köhler C, Merkle T, Neuhaus G (1999)
  The Plant Journal 18(1): 97-104.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [9]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867341

  Characterization of four cDNAs encoding different Importin alpha homologues from Arabidopsis thaliana, designated AtIMPa1-4.
  Schledz M, Leclerc D, Neuhaus G, Merkle T (1998)
  Plant Physiology 116: 868-868.

  PUB | GenBank
   
• [8]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867345

  Nuclear import of proteins: putative import factors and development of in vitro import systems in higher plants
  Nagy F, Merkle T (1997)
  Trends Plant Science 2(12): 458-464.

  PUB
   
• [7]
  

  1997 | Zeitschriftenaufsatz | PUB-ID: 1867347

  Characterization of proteins that interact with the GTP-bound form of the regulatory GTPase Ran in Arabidopsis.
  Haizel T, Merkle T, Pay A, Fejes E, Nagy F (1997)
  The Plant Journal 11(1): 93-103.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [6]
  

  1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092358

  A plant in vitro system for the nuclear import of proteins
  Merkle T, Leclerc D, Marshallsay C, Nagy F (1996)
  The Plant Journal 10(6): 1177-1186.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [5]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867356

  Characterization of membrane-bound small GTP-binding proteins from Nicotiana tabacum
  Haizel T, Merkle T, Turck F, Nagy F (1995)
  Plant Physiology 108(1): 59-67.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [4]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092391

  Phenotype of the fission yeast cell cycle regulatory mutant pim1-46 is suppressed by a tobacco cDNA encoding a small, Ran-like GTP-binding protein
  Merkle T, Haizel T, Matsumoto T, Harter K, Dallmann G, Nagy F (1994)
  The Plant Journal 6(4): 555-565.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [3]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092408

  Analysis of the parsley chalcone-synthase promoter in response to different light qualities
  Merkle T, Frohnmeyer HJ, Schulze-Lefert P, Dangl JL, Hahlbrock K, Schafer E (1994)
  Planta 193(2): 275-282.

  PUB | WoS | PubMed | Europe PMC
   
• [2]
  

  1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092443

  Nucleotide sequence and deduced amino acid sequence of a gene encoding the 23 kDa polypeptide of the oxygen-evolving complex from mustard (Sinapis alba L.)
  Merkle T, Krenz M, Wenng A, Schafer E (1990)
  Plant Molecular Biology 14(5): 889-890.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [1]
  

  1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2395115

  Effect of cycloheximide on the inverse control by phytochrome of the expression of two nuclear genes in barley (Hordeum vulgare L.)
  Kircher S, Merkle T, Schafer E, Nagy F (1988)
  Plant Cell Physiology 29: 1251-1254.

  PUB