PUB - Publikationen an der Universität Bielefeld

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• [44]
  

  2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912

  Rubiano Castellanos, C.C., Merkle, T. & Nattkemper, T.W. (In Press). Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana. Gehalten auf der BIOINFORMATICS Conf.

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• [43]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1994730

  Merkle, T. (2011). Nucleo-cytoplasmic transport of proteins and RNA in plants. Plant Cell Reports, 30(2), 153-176. Springer Science + Business Media. doi:10.1007/s00299-010-0928-3.

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• [42]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379960

  Pedersen, D.S., Coppens, F., Ma, L., Antosch, M., Marktl, B., Merkle, T., Beemster, G.T., Houben, A. & Grasser, K.D. (2011). The plant-specific family of DNA-binding proteins containing three HMG-box domains interacts with mitotic and meiotic chromosomes. New Phytologist, 192(3), 577-589. Wiley-Blackwell. doi:10.1111/j.1469-8137.2011.03828.x.

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• [41]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375640

  Merkle, T. & Grasser, K.D. (2011). Unexpected mobility of plant chromatin-associated HMGB proteins. Plant Signaling & Behavior, 6(6), 878-880. Informa UK Limited. doi:10.4161/psb.6.6.15255.

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• [40]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996275

  Niemeier, S., Alves jun., L. & Merkle, T. (2010). Improvement of the design and generation of highly specific plant knockdown lines using primary synthetic microRNAs (pri-smiRNAs). BMC Research Notes, 3(1): 59. Springer Science + Business Media. doi:10.1186/1756-0500-3-59.

  PUB | DOI | Download (ext.) | PubMed | Europe PMC
   
• [39]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968236

  Pedersen, D.S., Merkle, T., Marktl, B., Lildballe, D.L., Antosch, M., Bergmann, T., Tönsing, K., Anselmetti, D. & Grasser, K.D. (2010). Nucleocytoplasmic Distribution of the Arabidopsis Chromatin-Associated HMGB2/3 and HMGB4 Proteins. Plant Physiology, 154(4), 1831-1841. American Society of Plant Biologists (ASPB). doi:10.1104/pp.110.163055.

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• [38]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539

  Alves jun., L., Niemeier, S., Hauenschild, A., Rehmsmeier, M. & Merkle, T. (2009). Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research, 37(12), 4010-4021. Oxford University Press (OUP). doi:10.1093/nar/gkp272.

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• [37]
  

  2009 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1996271

  Merkle, T. (2009). Nuclear Export of Proteins and RNA. In I. Meier & D.G. Robinson (Hrsg.), Functional Organization of the Plant Nucleus (S. 55-57). Berlin, Heidelberg: Springer. doi:10.1007/978-3-540-71058-5-4.

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• [36]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635243

  Grasser, M., Kane, C.M., Merkle, T., Melzer, M., Emmersen, J. & Grasser, K.D. (2009). Transcript Elongation Factor TFIIS Is Involved in Arabidopsis Seed Dormancy. Journal of Molecular Biology, 386(3), 598-611. Elsevier BV. doi:10.1016/j.jmb.2008.12.066.

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• [35]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587614

  Hanano, S., Stracke, R., Jakoby, M., Merkle, T., Domagalska, M.A., Weisshaar, B. & Davis, S.J. (2008). A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters. BMC Genomics, 9(1): 182. BIOMED CENTRAL LTD. doi:10.1186/1471-2164-9-182.

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [34]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636583

  Hansen, F.T., Madsen, C.K., Nordland, A.M., Grasser, M., Merkle, T. & Grasser, K.D. (2008). A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains. Biochemistry, 47(50), 13207-13214. AMER CHEMICAL SOC. doi:10.1021/bi801772k.

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• [33]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592809

  Kiilerich, B., Stemmer, C., Merkle, T., Launholt, D., Gorr, G. & Grasser, K.D. (2008). Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens. Gene, 407(1-2), 86-97. ELSEVIER SCIENCE BV. doi:10.1016/j.gene.2007.09.025.

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• [32]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2316612

  Anselmetti, D., Hansmeier, N., Kalinowski, J., Martini, J., Merkle, T., Palmisano, R., Ros, R., Schmied, K., Sischka, A. & Tönsing, K. (2007). Analysis of Subcellular Surface Structure, Function and Dynamics. Analytical and Bioanalytical Chemistry, 387(1), 83-89. Springer Science and Business Media LLC. doi:10.1007/s00216-006-0789-3.

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• [31]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593589

  Martini, J., Schmied, K., Palmisano, R., Tönsing, K., Anselmetti, D. & Merkle, T. (2007). Multifocal two-photon laser scanning microscopy combined with photo-activatable GFP for in vivo monitoring of intracellular protein dynamics in real time. Journal of Structural Biology, 158(3), 401-409. ACADEMIC PRESS INC ELSEVIER SCIENCE. doi:10.1016/j.jsb.2006.12.012.

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• [30]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595711

  Gronlund, J.T., Stemmer, C., Lichota, J., Merkle, T. & Grasser, K.D. (2007). Functionality of the beta/six site-specific recombination system in tobacco and Arabidopsis: A novel tool for genetic engineering of plant genomes. Plant Molecular Biology, 63(4), 545-556. SPRINGER. doi:10.1007/s11103-006-9108-9.

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• [29]
  

  2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1946105

  Martini, J., Hellmich, W., Greif, D., Becker, A., Merkle, T., Ros, R., Ros, A., Tönsing, K. & Anselmetti, D. (2007). Systems nanobiology: from quantitative single molecule biophysics to microfluidic-based single cell analysis. In M. Faupel & E. Bertrand (Hrsg.), Subcellular Proteomics (S. 301-321). Heidelberg: Springer.

  PUB | PubMed | Europe PMC
   
• [28]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599537

  Grasser, M., Lentz, A., Lichota, J., Merkle, T. & Grasser, K.D. (2006). The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins. Journal of Molecular Biology, 358(3), 654-664. ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD. doi:10.1016/j.jmb.2006.02.068.

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• [27]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596329

  Launholt, D., Merkle, T., Houben, A., Schulz, A. & Grasser, K.D. (2006). Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus. The Plant Cell, 18(11), 2904-2918. AMER SOC PLANT BIOLOGISTS. doi:10.1105/tpc.106.047274.

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• [26]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598258

  Jakoby, M.J., Weinl, C., Pusch, S., Kuijt, S.J.H., Merkle, T., Dissmeyer, N. & Schnittger, A. (2006). Analysis of the subcellular localization, function, and proteolytic control of the Arabidopsis cyclin-dependent kinase inhibitor ICK1/KRP1. Plant Physiology, 141(4), 1293-1305. AMER SOC PLANT BIOLOGISTS. doi:10.1104/pp.106.081406.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [25]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597619

  Kaminaka, H., Naeke, C., Epple, P., Dittgen, J., Schuetze, K., Chaban, C., Holt, B.F., I.I.I., Merkle, T., Schaefer, E., Harter, K. & Dangl, J.L. (2006). bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection. The EMBO JOURNAL, 25(18), 4400-4411. NATURE PUBLISHING GROUP. doi:10.1038/sj.emboj.7601312.

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• [24]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996224

  Vetter, G., Hily, J.-M., Klein, E., Schmidlin, L., Haas, M., Merkle, T. & Gilmer, D. (2004). Nucleo-cytoplasmic shuttling of the beet necrotic yellow vein virus RNA-3-encoded p25 protein. The Journal of General Virology, 85(8), 2459-2469. Microbiology Society. doi:10.1099/vir.0.80142-0.

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• [23]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996206

  Grasser, K.D., Grill, S., Duroux, M., Launholt, D., Thomsen, M.S., Nielsen, B.V., Nielsen, H.K. & Merkle, T. (2004). HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein. Biochemistry, 43(5), 1309-1314. American Chemical Society (ACS). doi:10.1021/bi035931c.

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• [22]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2439047

  Ziemienowicz, A., Haasen, D., Staiger, D. & Merkle, T. (2003). Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7. Plant Molecular Biology, 53(1/2), 201-212. Springer. doi:10.1023/B:PLAN.0000009288.46713.1f.

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• [21]
  

  2003 | Zeitschriftenaufsatz | PUB-ID: 1867296

  Merkle, T. (2003). Nucleo-cytoplasmic partitioning of proteins in plants: implications for the regulation of environmental and developmental signalling. Current Genetics, 44(5), 231-260. Springer Science and Business Media LLC. doi:10.1007/s00294-003-0444-x.

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• [20]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867297

  Haasen, D. & Merkle, T. (2002). Characterisation of an Arabidopsis thaliana homologue of the nuclear export receptor CAS by its interaction with Importin alpha. Plant Biology, 4, 432-439. Wiley-V C H.

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• [19]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867299

  Huang, K., Merkle, T. & Beck, C.F. (2002). Isolation and characterization of a Chlamydomonas gene that encodes a putative blue-light photoreceptor of the phototropin family. Plant Physiology, 115(4), 613-622. Wiley. doi:10.1034/j.1399-3054.2002.1150416.x.

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• [18]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867302

  Karsies, A., Merkle, T., Szurek, B., Bonas, U., Hohn, T. & Leclerc, D. (2002). Regulated nuclear targeting of cauliflower mosaic virus. Journal of General Virology, 83(7), 1783-1790. Microbiology Society. doi:10.1099/0022-1317-83-7-1783.

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• [17]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867312

  Merkle, T. (2001). Nuclear import and export of proteins in plants: a tool for the regulation of signalling. Planta, 213(4), 499-517. Springer Science and Business Media LLC. doi:10.1007/s004250100621.

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• [16]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867317

  Ziemienowicz, A., Merkle, T., Schoumacher, F., Hohn, B. & Rossi, L. (2001). Import of agrobacterium T-DNA into plant nuclei: two distinct functions of VirD2 and VirE2 proteins. The Plant Cell, 13(2), 369-384. American Society of Plant Biologists (ASPB). doi:10.1105/tpc.13.2.369.

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• [15]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867313

  Köhler, C., Merkle, T., Roby, D. & Neuhaus, G. (2001). Developmentally regulated expression of a cyclic nucleotide-gated ion channel from Arabidopsis indicates its involvement in programmed cell death. Planta, 213(3), 327-332. Springer Science and Business Media LLC. doi:10.1007/s004250000510.

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• [14]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867322

  Röttgers, K., Krohn, N.M., Lichota, J., Stemmer, C., Merkle, T. & Grasser, K.D. (2000). DNA-interactions and nuclear localisation of the chromosomal HMG domain protein SSRP1 from maize. The Plant Journal, 23(3), 395-405. Wiley. doi:10.1046/j.1365-313x.2000.00801.x.

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• [13]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867328

  Obrdlik, P., Neuhaus, G. & Merkle, T. (2000). Plant heterotrimeric G protein beta subunit is associated with membranes via protein interactions involving coiled-coil formation. FEBS Letters, 476(3), 208-212. Wiley. doi:10.1016/S0014-5793(00)01706-3.

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• [12]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867331

  Haasen, D., Neuhaus, G. & Merkle, T. (1999). Isolaton and sequence analysis of a genomic clone of the nuclear export receptor AtXPO1 (AtCRM1) from Arabidopsis thaliana. Plant Physiology, 121, 311-311. Wiley.

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• [11]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867334

  Haasen, D., Köhler, C., Neuhaus, G. & Merkle, T. (1999). Nuclear export of proteins in plants: AtXPO1 is the export receptor for leucine-rich nuclear export signals in Arabidopsis thaliana. The Plant Journal, 20(6), 695-705. Wiley. doi:10.1046/j.1365-313X.1999.00644.x.

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• [10]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867338

  Köhler, C., Merkle, T. & Neuhaus, G. (1999). Characterisation of a novel gene family of putative cyclic nucleotide- and calmodulin-regulated ion channels in Arabidopsis thaliana. The Plant Journal, 18(1), 97-104. Wiley. doi:10.1046/j.1365-313X.1999.00422.x.

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• [9]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867341

  Schledz, M., Leclerc, D., Neuhaus, G. & Merkle, T. (1998). Characterization of four cDNAs encoding different Importin alpha homologues from Arabidopsis thaliana, designated AtIMPa1-4. Plant Physiology, 116, 868-868. Wiley.

  PUB | GenBank
   
• [8]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867345

  Nagy, F. & Merkle, T. (1997). Nuclear import of proteins: putative import factors and development of in vitro import systems in higher plants. Trends Plant Science, 2(12), 458-464. Elsevier.

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• [7]
  

  1997 | Zeitschriftenaufsatz | PUB-ID: 1867347

  Haizel, T., Merkle, T., Pay, A., Fejes, E. & Nagy, F. (1997). Characterization of proteins that interact with the GTP-bound form of the regulatory GTPase Ran in Arabidopsis. The Plant Journal, 11(1), 93-103. Wiley. doi:10.1046/j.1365-313X.1997.11010093.x.

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• [6]
  

  1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092358

  Merkle, T., Leclerc, D., Marshallsay, C. & Nagy, F. (1996). A plant in vitro system for the nuclear import of proteins. The Plant Journal, 10(6), 1177-1186. Wiley. doi:10.1046/j.1365-313X.1996.10061177.x.

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• [5]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867356

  Haizel, T., Merkle, T., Turck, F. & Nagy, F. (1995). Characterization of membrane-bound small GTP-binding proteins from Nicotiana tabacum. Plant Physiology, 108(1), 59-67. American Society of Plant Biologists (ASPB). doi:10.1104/pp.108.1.59.

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• [4]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092391

  Merkle, T., Haizel, T., Matsumoto, T., Harter, K., Dallmann, G. & Nagy, F. (1994). Phenotype of the fission yeast cell cycle regulatory mutant pim1-46 is suppressed by a tobacco cDNA encoding a small, Ran-like GTP-binding protein. The Plant Journal, 6(4), 555-565. Wiley. doi:10.1046/j.1365-313X.1994.6040555.x.

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• [3]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092408

  Merkle, T., Frohnmeyer, H.J., Schulze-Lefert, P., Dangl, J.L., Hahlbrock, K. & Schafer, E. (1994). Analysis of the parsley chalcone-synthase promoter in response to different light qualities. Planta, 193(2), 275-282. Springer-Verlag.

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• [2]
  

  1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092443

  Merkle, T., Krenz, M., Wenng, A. & Schafer, E. (1990). Nucleotide sequence and deduced amino acid sequence of a gene encoding the 23 kDa polypeptide of the oxygen-evolving complex from mustard (Sinapis alba L.). Plant Molecular Biology, 14(5), 889-890. Springer Science and Business Media LLC. doi:10.1007/BF00016526.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [1]
  

  1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2395115

  Kircher, S., Merkle, T., Schafer, E. & Nagy, F. (1988). Effect of cycloheximide on the inverse control by phytochrome of the expression of two nuclear genes in barley (Hordeum vulgare L.). Plant Cell Physiology, 29, 1251-1254. Oxford University Press.

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