PUB - Publikationen an der Universität Bielefeld

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• [44]
  

  2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912

  C.C. Rubiano Castellanos, T. Merkle, and T.W. Nattkemper, “Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana”, Presented at the BIOINFORMATICS Conf., Barcelona, Spain, In Press.

  PUB
   
• [43]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1994730

  T. Merkle, “Nucleo-cytoplasmic transport of proteins and RNA in plants”, Plant Cell Reports, vol. 30, 2011, pp. 153-176.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [42]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379960

  D.S. Pedersen, et al., “The plant-specific family of DNA-binding proteins containing three HMG-box domains interacts with mitotic and meiotic chromosomes”, New Phytologist, vol. 192, 2011, pp. 577-589.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [41]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375640

  T. Merkle and K.D. Grasser, “Unexpected mobility of plant chromatin-associated HMGB proteins”, Plant Signaling & Behavior, vol. 6, 2011, pp. 878-880.

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• [40]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996275

  S. Niemeier, L. Alves jun., and T. Merkle, “Improvement of the design and generation of highly specific plant knockdown lines using primary synthetic microRNAs (pri-smiRNAs)”, BMC Research Notes, vol. 3, 2010, : 59.

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• [39]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968236

  D.S. Pedersen, et al., “Nucleocytoplasmic Distribution of the Arabidopsis Chromatin-Associated HMGB2/3 and HMGB4 Proteins”, Plant Physiology, vol. 154, 2010, pp. 1831-1841.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [38]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539

  L. Alves jun., et al., “Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana”, Nucleic Acids Research, vol. 37, 2009, pp. 4010-4021.

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• [37]
  

  2009 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1996271

  T. Merkle, “Nuclear Export of Proteins and RNA”, Functional Organization of the Plant Nucleus, I. Meier and D.G. Robinson, eds., vol. 14, Berlin, Heidelberg: Springer, 2009, pp.55-57.

  PUB | DOI
   
• [36]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635243

  M. Grasser, et al., “Transcript Elongation Factor TFIIS Is Involved in Arabidopsis Seed Dormancy”, Journal of Molecular Biology, vol. 386, 2009, pp. 598-611.

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• [35]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587614

  S. Hanano, et al., “A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters”, BMC Genomics, vol. 9, 2008, : 182.

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• [34]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636583

  F.T. Hansen, et al., “A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains”, Biochemistry, vol. 47, 2008, pp. 13207-13214.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [33]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592809

  B. Kiilerich, et al., “Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens”, Gene, vol. 407, 2008, pp. 86-97.

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• [32]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2316612

  D. Anselmetti, et al., “Analysis of Subcellular Surface Structure, Function and Dynamics”, Analytical and Bioanalytical Chemistry, vol. 387, 2007, pp. 83-89.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [31]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593589

  J. Martini, et al., “Multifocal two-photon laser scanning microscopy combined with photo-activatable GFP for in vivo monitoring of intracellular protein dynamics in real time”, Journal of Structural Biology, vol. 158, 2007, pp. 401-409.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [30]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595711

  J.T. Gronlund, et al., “Functionality of the beta/six site-specific recombination system in tobacco and Arabidopsis: A novel tool for genetic engineering of plant genomes”, Plant Molecular Biology, vol. 63, 2007, pp. 545-556.

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• [29]
  

  2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1946105

  J. Martini, et al., “Systems nanobiology: from quantitative single molecule biophysics to microfluidic-based single cell analysis”, Subcellular Proteomics, M. Faupel and E. Bertrand, eds., vol. 43, Heidelberg: Springer, 2007, pp.301-321.

  PUB | PubMed | Europe PMC
   
• [28]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599537

  M. Grasser, et al., “The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins”, Journal of Molecular Biology, vol. 358, 2006, pp. 654-664.

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• [27]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596329

  D. Launholt, et al., “Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus”, The Plant Cell, vol. 18, 2006, pp. 2904-2918.

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• [26]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598258

  M.J. Jakoby, et al., “Analysis of the subcellular localization, function, and proteolytic control of the Arabidopsis cyclin-dependent kinase inhibitor ICK1/KRP1”, Plant Physiology, vol. 141, 2006, pp. 1293-1305.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [25]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597619

  H. Kaminaka, et al., “bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection”, The EMBO JOURNAL, vol. 25, 2006, pp. 4400-4411.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996224

  G. Vetter, et al., “Nucleo-cytoplasmic shuttling of the beet necrotic yellow vein virus RNA-3-encoded p25 protein”, The Journal of General Virology, vol. 85, 2004, pp. 2459-2469.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [23]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996206

  K.D. Grasser, et al., “HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein”, Biochemistry, vol. 43, 2004, pp. 1309-1314.

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• [22]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2439047

  A. Ziemienowicz, et al., “Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7”, Plant Molecular Biology, vol. 53, 2003, pp. 201-212.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2003 | Zeitschriftenaufsatz | PUB-ID: 1867296

  T. Merkle, “Nucleo-cytoplasmic partitioning of proteins in plants: implications for the regulation of environmental and developmental signalling”, Current Genetics, vol. 44, 2003, pp. 231-260.

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• [20]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867297

  D. Haasen and T. Merkle, “Characterisation of an Arabidopsis thaliana homologue of the nuclear export receptor CAS by its interaction with Importin alpha.”, Plant Biology, vol. 4, 2002, pp. 432-439.

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• [19]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867299

  K. Huang, T. Merkle, and C.F. Beck, “Isolation and characterization of a Chlamydomonas gene that encodes a putative blue-light photoreceptor of the phototropin family.”, Plant Physiology, vol. 115, 2002, pp. 613-622.

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• [18]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867302

  A. Karsies, et al., “Regulated nuclear targeting of cauliflower mosaic virus”, Journal of General Virology, vol. 83, 2002, pp. 1783-1790.

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• [17]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867312

  T. Merkle, “Nuclear import and export of proteins in plants: a tool for the regulation of signalling”, Planta, vol. 213, 2001, pp. 499-517.

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• [16]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867317

  A. Ziemienowicz, et al., “Import of agrobacterium T-DNA into plant nuclei: two distinct functions of VirD2 and VirE2 proteins”, The Plant Cell, vol. 13, 2001, pp. 369-384.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867313

  C. Köhler, et al., “Developmentally regulated expression of a cyclic nucleotide-gated ion channel from Arabidopsis indicates its involvement in programmed cell death”, Planta, vol. 213, 2001, pp. 327-332.

  PUB | DOI | PubMed | Europe PMC
   
• [14]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867322

  K. Röttgers, et al., “DNA-interactions and nuclear localisation of the chromosomal HMG domain protein SSRP1 from maize.”, The Plant Journal, vol. 23, 2000, pp. 395-405.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867328

  P. Obrdlik, G. Neuhaus, and T. Merkle, “Plant heterotrimeric G protein beta subunit is associated with membranes via protein interactions involving coiled-coil formation.”, FEBS Letters, vol. 476, 2000, pp. 208-212.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [12]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867331

  D. Haasen, G. Neuhaus, and T. Merkle, “Isolaton and sequence analysis of a genomic clone of the nuclear export receptor AtXPO1 (AtCRM1) from Arabidopsis thaliana”, Plant Physiology, vol. 121, 1999, pp. 311-311.

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• [11]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867334

  D. Haasen, et al., “Nuclear export of proteins in plants: AtXPO1 is the export receptor for leucine-rich nuclear export signals in Arabidopsis thaliana”, The Plant Journal, vol. 20, 1999, pp. 695-705.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [10]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867338

  C. Köhler, T. Merkle, and G. Neuhaus, “Characterisation of a novel gene family of putative cyclic nucleotide- and calmodulin-regulated ion channels in Arabidopsis thaliana”, The Plant Journal, vol. 18, 1999, pp. 97-104.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [9]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867341

  M. Schledz, et al., “Characterization of four cDNAs encoding different Importin alpha homologues from Arabidopsis thaliana, designated AtIMPa1-4.”, Plant Physiology, vol. 116, 1998, pp. 868-868.

  PUB | GenBank
   
• [8]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867345

  F. Nagy and T. Merkle, “Nuclear import of proteins: putative import factors and development of in vitro import systems in higher plants”, Trends Plant Science, vol. 2, 1997, pp. 458-464.

  PUB
   
• [7]
  

  1997 | Zeitschriftenaufsatz | PUB-ID: 1867347

  T. Haizel, et al., “Characterization of proteins that interact with the GTP-bound form of the regulatory GTPase Ran in Arabidopsis.”, The Plant Journal, vol. 11, 1997, pp. 93-103.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [6]
  

  1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092358

  T. Merkle, et al., “A plant in vitro system for the nuclear import of proteins”, The Plant Journal, vol. 10, 1996, pp. 1177-1186.

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• [5]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867356

  T. Haizel, et al., “Characterization of membrane-bound small GTP-binding proteins from Nicotiana tabacum”, Plant Physiology, vol. 108, 1995, pp. 59-67.

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• [4]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092391

  T. Merkle, et al., “Phenotype of the fission yeast cell cycle regulatory mutant pim1-46 is suppressed by a tobacco cDNA encoding a small, Ran-like GTP-binding protein”, The Plant Journal, vol. 6, 1994, pp. 555-565.

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• [3]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092408

  T. Merkle, et al., “Analysis of the parsley chalcone-synthase promoter in response to different light qualities”, Planta, vol. 193, 1994, pp. 275-282.

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• [2]
  

  1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092443

  T. Merkle, et al., “Nucleotide sequence and deduced amino acid sequence of a gene encoding the 23 kDa polypeptide of the oxygen-evolving complex from mustard (Sinapis alba L.)”, Plant Molecular Biology, vol. 14, 1990, pp. 889-890.

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• [1]
  

  1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2395115

  S. Kircher, et al., “Effect of cycloheximide on the inverse control by phytochrome of the expression of two nuclear genes in barley (Hordeum vulgare L.)”, Plant Cell Physiology, vol. 29, 1988, pp. 1251-1254.

  PUB