PUB - Publikationen an der Universität Bielefeld

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• [44]
  

  2013 | Konferenzbeitrag | Im Druck | PUB-ID: 2537912

  Rubiano Castellanos, C. C.; Merkle, T.; Nattkemper, T. W. (In Press): Using random forest to find Nuclear Export Signals (NESs) in proteins of Arabidopsis thaliana.

  PUB
   
• [43]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1994730

  Merkle, T. (2011): Nucleo-cytoplasmic transport of proteins and RNA in plants Plant Cell Reports,30:(2): 153-176.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [42]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379960

  Pedersen, D. S.; Coppens, F.; Ma, L.; Antosch, M.; Marktl, B.; Merkle, T.; Beemster, G. T.; Houben, A.; Grasser, K. D. (2011): The plant-specific family of DNA-binding proteins containing three HMG-box domains interacts with mitotic and meiotic chromosomes New Phytologist,192:(3): 577-589.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [41]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375640

  Merkle, T.; Grasser, K. D. (2011): Unexpected mobility of plant chromatin-associated HMGB proteins Plant Signaling & Behavior,6:(6): 878-880.

  PUB | DOI | PubMed | Europe PMC
   
• [40]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996275

  Niemeier, S.; Alves jun., L.; Merkle, T. (2010): Improvement of the design and generation of highly specific plant knockdown lines using primary synthetic microRNAs (pri-smiRNAs) BMC Research Notes,3:(1):59

  PUB | DOI | Download (ext.) | PubMed | Europe PMC
   
• [39]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968236

  Pedersen, D. S.; Merkle, T.; Marktl, B.; Lildballe, D. L.; Antosch, M.; Bergmann, T.; Tönsing, K.; Anselmetti, D.; Grasser, K. D. (2010): Nucleocytoplasmic Distribution of the Arabidopsis Chromatin-Associated HMGB2/3 and HMGB4 Proteins Plant Physiology,154:(4): 1831-1841.

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• [38]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539

  Alves jun., L.; Niemeier, S.; Hauenschild, A.; Rehmsmeier, M.; Merkle, T. (2009): Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana Nucleic Acids Research,37:(12): 4010-4021.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [37]
  

  2009 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1996271

  Merkle, T. (2009): Nuclear Export of Proteins and RNA. In: Iris Meier; DG Robinson (Hrsg.): Functional Organization of the Plant Nucleus. Berlin, Heidelberg: Springer. (14). S. 55-57.

  PUB | DOI
   
• [36]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635243

  Grasser, M.; Kane, C. M.; Merkle, T.; Melzer, M.; Emmersen, J.; Grasser, K. D. (2009): Transcript Elongation Factor TFIIS Is Involved in Arabidopsis Seed Dormancy Journal of Molecular Biology,386:(3): 598-611.

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• [35]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587614

  Hanano, S.; Stracke, R.; Jakoby, M.; Merkle, T.; Domagalska, M. A.; Weisshaar, B.; Davis, S. J. (2008): A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters BMC Genomics,9:(1):182

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• [34]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636583

  Hansen, F. T.; Madsen, C. K.; Nordland, A. M.; Grasser, M.; Merkle, T.; Grasser, K. D. (2008): A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains Biochemistry,47:(50): 13207-13214.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [33]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592809

  Kiilerich, B.; Stemmer, C.; Merkle, T.; Launholt, D.; Gorr, G.; Grasser, K. D. (2008): Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens Gene,407:(1-2): 86-97.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [32]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2316612

  Anselmetti, D.; Hansmeier, N.; Kalinowski, J.; Martini, J.; Merkle, T.; Palmisano, R.; Ros, R.; Schmied, K.; Sischka, A.; Tönsing, K. (2007): Analysis of Subcellular Surface Structure, Function and Dynamics Analytical and Bioanalytical Chemistry,387:(1): 83-89.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [31]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593589

  Martini, J.; Schmied, K.; Palmisano, R.; Tönsing, K.; Anselmetti, D.; Merkle, T. (2007): Multifocal two-photon laser scanning microscopy combined with photo-activatable GFP for in vivo monitoring of intracellular protein dynamics in real time Journal of Structural Biology,158:(3): 401-409.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [30]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595711

  Gronlund, J. T.; Stemmer, C.; Lichota, J.; Merkle, T.; Grasser, K. D. (2007): Functionality of the beta/six site-specific recombination system in tobacco and Arabidopsis: A novel tool for genetic engineering of plant genomes Plant Molecular Biology,63:(4): 545-556.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [29]
  

  2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1946105

  Martini, J.; Hellmich, W.; Greif, D.; Becker, A.; Merkle, T.; Ros, R.; Ros, A.; Tönsing, K.; Anselmetti, D. (2007): Systems nanobiology: from quantitative single molecule biophysics to microfluidic-based single cell analysis. In: Michel Faupel; Eric Bertrand (Hrsg.): Subcellular Proteomics. Heidelberg: Springer. (43). S. 301-321.

  PUB | PubMed | Europe PMC
   
• [28]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599537

  Grasser, M.; Lentz, A.; Lichota, J.; Merkle, T.; Grasser, K. D. (2006): The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins Journal of Molecular Biology,358:(3): 654-664.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [27]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596329

  Launholt, D.; Merkle, T.; Houben, A.; Schulz, A.; Grasser, K. D. (2006): Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus The Plant Cell,18:(11): 2904-2918.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [26]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598258

  Jakoby, M. J.; Weinl, C.; Pusch, S.; Kuijt, S. J. H.; Merkle, T.; Dissmeyer, N.; Schnittger, A. (2006): Analysis of the subcellular localization, function, and proteolytic control of the Arabidopsis cyclin-dependent kinase inhibitor ICK1/KRP1 Plant Physiology,141:(4): 1293-1305.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [25]
  

  2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597619

  Kaminaka, H.; Naeke, C.; Epple, P.; Dittgen, J.; Schuetze, K.; Chaban, C.; Holt, B. F. , I. I. I.; Merkle, T.; Schaefer, E.; Harter, K.; Dangl, J. L. (2006): bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection The EMBO JOURNAL,25:(18): 4400-4411.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996224

  Vetter, G.; Hily, J. - M.; Klein, E.; Schmidlin, L.; Haas, M.; Merkle, T.; Gilmer, D. (2004): Nucleo-cytoplasmic shuttling of the beet necrotic yellow vein virus RNA-3-encoded p25 protein The Journal of General Virology,85:(8): 2459-2469.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [23]
  

  2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996206

  Grasser, K. D.; Grill, S.; Duroux, M.; Launholt, D.; Thomsen, M. S.; Nielsen, B. V.; Nielsen, H. K.; Merkle, T. (2004): HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein Biochemistry,43:(5): 1309-1314.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [22]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2439047

  Ziemienowicz, A.; Haasen, D.; Staiger, D.; Merkle, T. (2003): Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7 Plant Molecular Biology,53:(1/2): 201-212.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2003 | Zeitschriftenaufsatz | PUB-ID: 1867296

  Merkle, T. (2003): Nucleo-cytoplasmic partitioning of proteins in plants: implications for the regulation of environmental and developmental signalling Current Genetics,44:(5): 231-260.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [20]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867297

  Haasen, D.; Merkle, T. (2002): Characterisation of an Arabidopsis thaliana homologue of the nuclear export receptor CAS by its interaction with Importin alpha. Plant Biology,4: 432-439.

  PUB
   
• [19]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867299

  Huang, K.; Merkle, T.; Beck, C. F. (2002): Isolation and characterization of a Chlamydomonas gene that encodes a putative blue-light photoreceptor of the phototropin family. Plant Physiology,115:(4): 613-622.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [18]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867302

  Karsies, A.; Merkle, T.; Szurek, B.; Bonas, U.; Hohn, T.; Leclerc, D. (2002): Regulated nuclear targeting of cauliflower mosaic virus Journal of General Virology,83:(7): 1783-1790.

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• [17]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867312

  Merkle, T. (2001): Nuclear import and export of proteins in plants: a tool for the regulation of signalling Planta,213:(4): 499-517.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [16]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867317

  Ziemienowicz, A.; Merkle, T.; Schoumacher, F.; Hohn, B.; Rossi, L. (2001): Import of agrobacterium T-DNA into plant nuclei: two distinct functions of VirD2 and VirE2 proteins The Plant Cell,13:(2): 369-384.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867313

  Köhler, C.; Merkle, T.; Roby, D.; Neuhaus, G. (2001): Developmentally regulated expression of a cyclic nucleotide-gated ion channel from Arabidopsis indicates its involvement in programmed cell death Planta,213:(3): 327-332.

  PUB | DOI | PubMed | Europe PMC
   
• [14]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867322

  Röttgers, K.; Krohn, N. M.; Lichota, J.; Stemmer, C.; Merkle, T.; Grasser, K. D. (2000): DNA-interactions and nuclear localisation of the chromosomal HMG domain protein SSRP1 from maize. The Plant Journal,23:(3): 395-405.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867328

  Obrdlik, P.; Neuhaus, G.; Merkle, T. (2000): Plant heterotrimeric G protein beta subunit is associated with membranes via protein interactions involving coiled-coil formation. FEBS Letters,476:(3): 208-212.

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• [12]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867331

  Haasen, D.; Neuhaus, G.; Merkle, T. (1999): Isolaton and sequence analysis of a genomic clone of the nuclear export receptor AtXPO1 (AtCRM1) from Arabidopsis thaliana Plant Physiology,121: 311-311.

  PUB
   
• [11]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867334

  Haasen, D.; Köhler, C.; Neuhaus, G.; Merkle, T. (1999): Nuclear export of proteins in plants: AtXPO1 is the export receptor for leucine-rich nuclear export signals in Arabidopsis thaliana The Plant Journal,20:(6): 695-705.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [10]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867338

  Köhler, C.; Merkle, T.; Neuhaus, G. (1999): Characterisation of a novel gene family of putative cyclic nucleotide- and calmodulin-regulated ion channels in Arabidopsis thaliana The Plant Journal,18:(1): 97-104.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [9]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867341

  Schledz, M.; Leclerc, D.; Neuhaus, G.; Merkle, T. (1998): Characterization of four cDNAs encoding different Importin alpha homologues from Arabidopsis thaliana, designated AtIMPa1-4. Plant Physiology,116: 868-868.

  PUB | GenBank
   
• [8]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867345

  Nagy, F.; Merkle, T. (1997): Nuclear import of proteins: putative import factors and development of in vitro import systems in higher plants Trends Plant Science,2:(12): 458-464.

  PUB
   
• [7]
  

  1997 | Zeitschriftenaufsatz | PUB-ID: 1867347

  Haizel, T.; Merkle, T.; Pay, A.; Fejes, E.; Nagy, F. (1997): Characterization of proteins that interact with the GTP-bound form of the regulatory GTPase Ran in Arabidopsis. The Plant Journal,11:(1): 93-103.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [6]
  

  1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092358

  Merkle, T.; Leclerc, D.; Marshallsay, C.; Nagy, F. (1996): A plant in vitro system for the nuclear import of proteins The Plant Journal,10:(6): 1177-1186.

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• [5]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867356

  Haizel, T.; Merkle, T.; Turck, F.; Nagy, F. (1995): Characterization of membrane-bound small GTP-binding proteins from Nicotiana tabacum Plant Physiology,108:(1): 59-67.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [4]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092391

  Merkle, T.; Haizel, T.; Matsumoto, T.; Harter, K.; Dallmann, G.; Nagy, F. (1994): Phenotype of the fission yeast cell cycle regulatory mutant pim1-46 is suppressed by a tobacco cDNA encoding a small, Ran-like GTP-binding protein The Plant Journal,6:(4): 555-565.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [3]
  

  1994 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092408

  Merkle, T.; Frohnmeyer, H. J.; Schulze-Lefert, P.; Dangl, J. L.; Hahlbrock, K.; Schafer, E. (1994): Analysis of the parsley chalcone-synthase promoter in response to different light qualities Planta,193:(2): 275-282.

  PUB | WoS | PubMed | Europe PMC
   
• [2]
  

  1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092443

  Merkle, T.; Krenz, M.; Wenng, A.; Schafer, E. (1990): Nucleotide sequence and deduced amino acid sequence of a gene encoding the 23 kDa polypeptide of the oxygen-evolving complex from mustard (Sinapis alba L.) Plant Molecular Biology,14:(5): 889-890.

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [1]
  

  1988 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2395115

  Kircher, S.; Merkle, T.; Schafer, E.; Nagy, F. (1988): Effect of cycloheximide on the inverse control by phytochrome of the expression of two nuclear genes in barley (Hordeum vulgare L.) Plant Cell Physiology,29: 1251-1254.

  PUB