PUB - Publikationen an der Universität Bielefeld

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• [55]
  

  2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2989114

  Baake, E., Cordero, F., & Di Gaspero, E., 2024. The mutation process on the ancestral line under selection. Theoretical population biology.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [54]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979037

  Baake, E., Esercito, L., & Hummel, S., 2023. Lines of descent in a Moran model with frequency-dependent selection and mutation. Stochastic Processes and their Applications, 160, p 409-457.

  PUB | DOI | WoS
   
• [53]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965524

  Baake, E., Cordero, F., & Hummel, S., 2022. Lines of descent in the deterministic mutation–selection model with pairwise interaction. Annals of Applied Probability, 32(4), p 2400-2447.

  PUB | DOI | WoS
   
• [52]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953579

  Alberti, F., et al., 2021. Solving the migration-recombination equation from a genealogical point of view. Journal of mathematical biology, 82(5): 41 .

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [51]
  

  2021 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2957507

  Alberti, F., Herrmann, C., & Baake, E., In Press. Selection, recombination, and the ancestral initiation graph. Theoretical population biology.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [50]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957017

  Alberti, F., & Baake, E., 2021. Solving the Selection-Recombination Equation: Ancestral Lines and Dual Processes. Documenta Mathematica , 26, p 743-793.

  PUB | DOI | WoS
   
• [49]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936339

  Baake, E., et al., 2019. Modelling and simulating Lenski's long-term evolution experiment. THEORETICAL POPULATION BIOLOGY, 127, p 58-74.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [48]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931242

  Baake, E., Cordero, F., & Hummel, S., 2018. A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent. JOURNAL OF MATHEMATICAL BIOLOGY, 77(3), p 795-820.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [47]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920936

  Baake, E., & Wakolbinger, A., 2018. Lines of Descent Under Selection. JOURNAL OF STATISTICAL PHYSICS, 172(1), p 156-174.

  PUB | DOI | WoS
   
• [46]
  

  2017 | Preprint | PUB-ID: 2908549

  Baake, E., & Esser, M., 2017. Fragmentation process, pruning poset for rooted forests, and Möbius inversion. arXiv:1702.03173.

  PUB | Download (ext.) | arXiv
   
• [45]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2780316

  Baake, E., Baake, M., & Salamat, M., 2016. The general recombination equation in continuous time and its solution. Discrete and Continuous Dynamical Systems, 36(1), p 63-95.

  PUB | DOI | WoS
   
• [44]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908021

  Baake, E., & Baake, M., 2016. Haldane linearisation done right: Solving the nonlinear recombination equation the easy way. Discrete and Continuous Dynamical Systems. A, 36(12), p 6645-6656.

  PUB | DOI | WoS | arXiv
   
• [43]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908405

  Baake, E., Lenz, U., & Wakolbinger, A., 2016. The common ancestor type distribution of a $\Lambda$-Wright-Fisher process with selection and mutation. Electronic Communications in Probability, 21: 59.

  PUB | DOI | WoS
   
• [42]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904686

  Esser, M., Probst, S., & Baake, E., 2016. Partitioning, duality, and linkage disequilibria in the Moran model with recombination. JOURNAL OF MATHEMATICAL BIOLOGY, 73(1), p 161-197.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [41]
  

  2015 | Preprint | PUB-ID: 2908408

  Baake, E., & Wakolbinger, A., 2015. Feller's Contributions to Mathematical Biology. arXiv:1501.05278.

  PUB | arXiv
   
• [40]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766816

  Lenz, U., et al., 2015. Looking down in the ancestral selection graph: A probabilistic approach to the common ancestor type distribution. Theoretical Population Biology, 103, p 27-37.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [39]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677355

  Baake, E., & von Wangenheim, U., 2014. Single-crossover recombination and ancestral recombination trees. Journal of Mathematical Biology, 68(6), p 1371-1402.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [38]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635471

  Kluth, S., Hustedt, T., & Baake, E., 2013. The Common Ancestor Process Revisited. Bulletin Of Mathematical Biology, 75(11), p 2003-2027.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [37]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645211

  Kluth, S., & Baake, E., 2013. The Moran model with selection: Fixation probabilities, ancestral lines, and an alternative particle representation. Theoretical Population Biology, 90, p 104-112.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [36]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377270

  Baake, E., & Hustedt, T., 2011. Moment closure in a Moran model with recombination. Markov Processes Relat. Fields, 17(3), p 429-446.

  PUB | arXiv
   
• [35]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796454

  von Wangenheim, U., Baake, E., & Baake, M., 2010. Single-crossover recombination in discrete time. JOURNAL OF MATHEMATICAL BIOLOGY, 60(5), p 727-760.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [34]
  

  2010 | Konferenzbeitrag | PUB-ID: 2377283

  Baake, E., 2010. Deterministic and stochastic aspects of single-crossover recombination. In Proceedings of the International Congress of Mathematicians, Hyderabad 2010, ed. R. Bhatia, Hindustan Book Agency, New Delhi, Vol. IV, pp. 3038--3053.

  PUB | arXiv
   
• [33]
  

  2009 | Zeitschriftenaufsatz | PUB-ID: 2378093

  Baake, E., 2009. Deterministic and stochastic aspects of recombination. Oberwolfach Reports, 6, p 1366.

  PUB
   
• [32]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635450

  Lipsmeier, F., & Baake, E., 2009. Rare Event Simulation for T-cell Activation. JOURNAL OF STATISTICAL PHYSICS, 134(3), p 537-566.

  PUB | DOI | WoS
   
• [31]
  

  2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378061

  Baake, E., & Lipsmeier, F., 2008. Rare event simulation in immunobiology. In Proceedings of the 7th International Workshop on Rare Event Simulation RESIM 2008, Rennes, France.

  PUB
   
• [30]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630777

  Baake, E., & Herms, I., 2008. Single-crossover dynamics: Finite versus infinite populations. BULLETIN OF MATHEMATICAL BIOLOGY, 70(2), p 603-624.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [29]
  

  2008 | Zeitschriftenaufsatz | PUB-ID: 1927750

  Bialowons, R., & Baake, E., 2008. Ancestral processes with selection: Branching and Moran models. Banach Center Publications, 80, p 33-52.

  PUB | DOI | arXiv
   
• [28]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586423

  Zint, N., Baake, E., & den Hollander, F., 2008. How T-cells use large deviations to recognize foreign antigens. JOURNAL OF MATHEMATICAL BIOLOGY, 57(6), p 841-861.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [27]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378105

  Baake, E., 2007. Are mutations spontaneous or directed. Nieuw Archief voor Wiskunde, 5/8(3), p 171-174.

  PUB
   
• [26]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595869

  Baake, E., & Georgii, H.-O., 2007. Mutation, selection, and ancestry in branching models: a variational approach. JOURNAL OF MATHEMATICAL BIOLOGY, 54(2), p 257-303.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [25]
  

  2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604953

  Baake, E., et al., 2005. An asymptotic maximum principle for essentially linear evolution models. JOURNAL OF MATHEMATICAL BIOLOGY, 50(1), p 83-114.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377274

  Georgii, H.-O., & Baake, E., 2003. Supercritical multitype branching processes: the ancestral types of typical individuals. Adv. Appl. Prob. 35 (2003), 1090-1110.

  PUB | arXiv
   
• [23]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1927781

  Baake, M., & Baake, E., 2003. An exactly solved model for mutation, recombination and selection. Canadian Journal of Mathematics, 55(1), p 3-41.

  PUB | DOI | WoS | arXiv
   
• [22]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613803

  Hermisson, J., et al., 2002. Mutation-selection balance: Ancestry, load, and maximum principle. THEORETICAL POPULATION BIOLOGY, 62(1), p 9-46.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377995

  Baake, E., & Wagner, H., 2001. Mutation-selection models solved exactly with methods of statistical mechanics. GENETICS RESEARCH, 78, p 93-117.

  PUB
   
• [20]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378040

  Baake, E., 2001. Mutation and recombination with tight linkage. JOURNAL OF MATHEMATICAL BIOLOGY, 42, p 455-488.

  PUB
   
• [19]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378046

  Baake, E., & von Haeseler, A., 1999. Distance measures in terms of substitution processes. THEORETICAL POPULATION BIOLOGY, 55, p 166-175.

  PUB
   
• [18]
  

  1999 | Sammelwerksbeitrag | PUB-ID: 1927777

  Gabriel, W., & Baake, E., 1999. Biological evolution through mutation, selection, and drift: An introductory review. In in: Ann. Rev. Comp. Phys. VII (D. Stauffer, ed.), pp. 203-264 (World Scientific, Singapore, 2000).

  PUB | arXiv
   
• [17]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378116

  Baake, E., 1998. What can and what cannot be inferred from pairwise sequence comparisons? MATHEMATICAL BIOSCIENCES, 154, p 1-21.

  PUB
   
• [16]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378123

  Wagner, H., Baake, E., & Gerisch, T., 1998. Ising quantum chain and sequence evolution. JOURNAL OF STATISTICAL PHYSICS, 92(5/6), p 1017-1052.

  PUB
   
• [15]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378127

  Baake, E., Baake, M., & Wagner, H., 1998. Quantum mechanics versus classical probabilities in biological evolution. PHYSICAL REVIEW E, 57(1), p 1191-1192.

  PUB
   
• [14]
  

  1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378442

  Wagner, H., & Baake, E., 1997. Ising quantum chain and biological evolution. In H. - D. Doebner, P. Nattermann, & W. Scherer, eds. Physical Applications and Mathematical Aspects of Geometry, Groups and Algebras. no.II Singapore: World Scientific, pp. 821-825.

  PUB
   
• [13]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378376

  Baake, E., Baake, M., & Wagner, H., 1997. Ising quantum chain is equivalent to a model of biological evolution. PHYSICAL REVIEW LETTERS, 78, p 559-562.

  PUB
   
• [12]
  

  1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378438

  Baake, E., 1997. Diploid sequence space, dominance, and evolution. In O. Arino, D. Axelrod, & M. Kimmel, eds. Advances in Mathematical Population Dynamics - Molecules, Cells and Man. Singapore: World Scientific, pp. 1-15.

  PUB
   
• [11]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378139

  Baake, E., & Wiehe, T., 1997. Bifurcations in haploid and diploid sequence space models. JOURNAL OF MATHEMATICAL BIOLOGY, 35(3), p 321-343.

  PUB
   
• [10]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378431

  Baake, E., 1995. Diploid models on sequence space. JOURNAL OF BIOLOGICAL SYSTEMS, 3, p 343-349.

  PUB
   
• [9]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378422

  Wiehe, T., Baake, E., & Schuster, P., 1995. Error propagation in reproduction of diploid organisms. A case study on single peaked landscapes. JOURNAL OF THEORETICAL BIOLOGY, 177, p 1-15.

  PUB
   
• [8]
  

  1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775603

  Baake, M., Baake, E., & Eich, E., 1993. On the role of invariants for the parameter estimation problem in Hamiltonian systems. Physics letters, 180(1-2), p 74-82.

  PUB | PDF | DOI | WoS
   
• [7]
  

  1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775599

  Baake, E., et al., 1992. Fitting ordinary differential equations to chaotic data. Physical Review A, 45(8), p 5524-5529.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [6]
  

  1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775596

  Baake, E., & Schlöder, J.P., 1992. Modelling the fast fluorescence rise of photosynthesis. Bulletin of mathematical biology, 54(6), p 999-1021.

  PUB | PDF | DOI | WoS
   
• [5]
  

  1990 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378459

  Baake, E., & Strasser, R.J., 1990. A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves. In M. Baltscheffsky, ed. Current Research in Photosynthesis. Dordrecht: Kluwer, pp. 443-449.

  PUB
   
• [4]
  

  1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775593

  Pfündel, E., & Baake, E., 1990. A quantitative description of fluorescence excitation spectra in intact bean leaves greened under intermittent light. Photosynthesis Research, 26(1), p 19-28.

  PUB | PDF | DOI
   
• [3]
  

  1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378482

  Baake, E., & Strasser, R.J., 1989. A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves. PHYSIOLOGIA PLANTARUM, 76.

  PUB
   
• [2]
  

  1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785358

  Buff, E., Baake, M., & Sievers, A., 1987. An Empirical Function for the Description of Root Growth. Plant Physiology, 83(3), p 685-690.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785355

  Baake, M., & Buff, E., 1986. From cell growth to root growth. Journal of Theoretical Biology, 123(3), p 347-365.

  PUB | PDF | DOI | WoS