54 Publikationen

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  • [54]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979037
    Baake E, Esercito L, Hummel S (2023)
    Lines of descent in a Moran model with frequency-dependent selection and mutation.
    Stochastic Processes and their Applications 160: 409-457.
    PUB | DOI | WoS
     
  • [53]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965524
    Baake E, Cordero F, Hummel S (2022)
    Lines of descent in the deterministic mutation–selection model with pairwise interaction.
    Annals of Applied Probability 32(4): 2400-2447.
    PUB | DOI | WoS
     
  • [52]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953579 OA
    Alberti F, Baake E, Letter I, Martinez S (2021)
    Solving the migration-recombination equation from a genealogical point of view.
    Journal of mathematical biology 82(5): 41 .
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [51]
    2021 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2957507
    Alberti F, Herrmann C, Baake E (In Press)
    Selection, recombination, and the ancestral initiation graph.
    Theoretical population biology.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [50]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957017
    Alberti F, Baake E (2021)
    Solving the Selection-Recombination Equation: Ancestral Lines and Dual Processes.
    Documenta Mathematica 26: 743-793.
    PUB | DOI | WoS
     
  • [49]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936339
    Baake E, Gonzalez Casanova A, Probst S, Wakolbinger A (2019)
    Modelling and simulating Lenski's long-term evolution experiment.
    THEORETICAL POPULATION BIOLOGY 127: 58-74.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [48]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931242
    Baake E, Cordero F, Hummel S (2018)
    A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent.
    JOURNAL OF MATHEMATICAL BIOLOGY 77(3): 795-820.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [47]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920936
    Baake E, Wakolbinger A (2018)
    Lines of Descent Under Selection.
    JOURNAL OF STATISTICAL PHYSICS 172(1): 156-174.
    PUB | DOI | WoS
     
  • [46]
    2017 | Preprint | PUB-ID: 2908549
    Baake E, Esser M (2017)
    Fragmentation process, pruning poset for rooted forests, and Möbius inversion.
    arXiv:1702.03173.
    PUB | Download (ext.) | arXiv
     
  • [45]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2780316
    Baake E, Baake M, Salamat M (2016)
    The general recombination equation in continuous time and its solution.
    Discrete and Continuous Dynamical Systems 36(1): 63-95.
    PUB | DOI | WoS
     
  • [44]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908021
    Baake E, Baake M (2016)
    Haldane linearisation done right: Solving the nonlinear recombination equation the easy way.
    Discrete and Continuous Dynamical Systems. A 36(12): 6645-6656.
    PUB | DOI | WoS | arXiv
     
  • [43]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908405
    Baake E, Lenz U, Wakolbinger A (2016)
    The common ancestor type distribution of a $\Lambda$-Wright-Fisher process with selection and mutation.
    Electronic Communications in Probability 21: 59.
    PUB | DOI | WoS
     
  • [42]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904686
    Esser M, Probst S, Baake E (2016)
    Partitioning, duality, and linkage disequilibria in the Moran model with recombination.
    JOURNAL OF MATHEMATICAL BIOLOGY 73(1): 161-197.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [41]
    2015 | Preprint | PUB-ID: 2908408
    Baake E, Wakolbinger A (2015)
    Feller's Contributions to Mathematical Biology.
    arXiv:1501.05278.
    PUB | arXiv
     
  • [40]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766816
    Lenz U, Kluth S, Baake E, Wakolbinger A (2015)
    Looking down in the ancestral selection graph: A probabilistic approach to the common ancestor type distribution.
    Theoretical Population Biology 103: 27-37.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [39]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677355
    Baake E, von Wangenheim U (2014)
    Single-crossover recombination and ancestral recombination trees.
    Journal of Mathematical Biology 68(6): 1371-1402.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [38]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635471
    Kluth S, Hustedt T, Baake E (2013)
    The Common Ancestor Process Revisited.
    Bulletin Of Mathematical Biology 75(11): 2003-2027.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [37]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645211
    Kluth S, Baake E (2013)
    The Moran model with selection: Fixation probabilities, ancestral lines, and an alternative particle representation.
    Theoretical Population Biology 90: 104-112.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [36]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377270
    Baake E, Hustedt T (2011)
    Moment closure in a Moran model with recombination.
    Markov Processes Relat. Fields 17(3): 429-446.
    PUB | arXiv
     
  • [35]
    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796454
    von Wangenheim U, Baake E, Baake M (2010)
    Single-crossover recombination in discrete time.
    JOURNAL OF MATHEMATICAL BIOLOGY 60(5): 727-760.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [34]
    2010 | Konferenzbeitrag | PUB-ID: 2377283
    Baake E (2010)
    Deterministic and stochastic aspects of single-crossover recombination.
    In: Proceedings of the International Congress of Mathematicians, Hyderabad 2010, ed. R. Bhatia, Hindustan Book Agency, New Delhi, Vol. IV, pp. 3038--3053. .
    PUB | arXiv
     
  • [33]
    2009 | Zeitschriftenaufsatz | PUB-ID: 2378093
    Baake E (2009)
    Deterministic and stochastic aspects of recombination.
    Oberwolfach Reports 6: 1366.
    PUB
     
  • [32]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635450
    Lipsmeier F, Baake E (2009)
    Rare Event Simulation for T-cell Activation.
    JOURNAL OF STATISTICAL PHYSICS 134(3): 537-566.
    PUB | DOI | WoS
     
  • [31]
    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378061
    Baake E, Lipsmeier F (2008)
    Rare event simulation in immunobiology.
    In: Proceedings of the 7th International Workshop on Rare Event Simulation RESIM 2008, Rennes, France. .
    PUB
     
  • [30]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630777
    Baake E, Herms I (2008)
    Single-crossover dynamics: Finite versus infinite populations.
    BULLETIN OF MATHEMATICAL BIOLOGY 70(2): 603-624.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [29]
    2008 | Zeitschriftenaufsatz | PUB-ID: 1927750
    Bialowons R, Baake E (2008)
    Ancestral processes with selection: Branching and Moran models.
    Banach Center Publications 80: 33-52.
    PUB | DOI | arXiv
     
  • [28]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586423
    Zint N, Baake E, den Hollander F (2008)
    How T-cells use large deviations to recognize foreign antigens.
    JOURNAL OF MATHEMATICAL BIOLOGY 57(6): 841-861.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [27]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378105
    Baake E (2007)
    Are mutations spontaneous or directed.
    Nieuw Archief voor Wiskunde 5/8(3): 171-174.
    PUB
     
  • [26]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595869
    Baake E, Georgii H-O (2007)
    Mutation, selection, and ancestry in branching models: a variational approach.
    JOURNAL OF MATHEMATICAL BIOLOGY 54(2): 257-303.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [25]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604953
    Baake E, Baake M, Bovier A, Klein M (2005)
    An asymptotic maximum principle for essentially linear evolution models.
    JOURNAL OF MATHEMATICAL BIOLOGY 50(1): 83-114.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [24]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377274
    Georgii H-O, Baake E (2003)
    Supercritical multitype branching processes: the ancestral types of typical individuals.
    Adv. Appl. Prob. 35 (2003), 1090-1110.
    PUB | arXiv
     
  • [23]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1927781
    Baake M, Baake E (2003)
    An exactly solved model for mutation, recombination and selection.
    Canadian Journal of Mathematics 55(1): 3-41.
    PUB | DOI | WoS | arXiv
     
  • [22]
    2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613803
    Hermisson J, Redner O, Wagner H, Baake E (2002)
    Mutation-selection balance: Ancestry, load, and maximum principle.
    THEORETICAL POPULATION BIOLOGY 62(1): 9-46.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377995
    Baake E, Wagner H (2001)
    Mutation-selection models solved exactly with methods of statistical mechanics.
    GENETICS RESEARCH 78: 93-117.
    PUB
     
  • [20]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378040
    Baake E (2001)
    Mutation and recombination with tight linkage.
    JOURNAL OF MATHEMATICAL BIOLOGY 42: 455-488.
    PUB
     
  • [19]
    1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378046
    Baake E, von Haeseler A (1999)
    Distance measures in terms of substitution processes.
    THEORETICAL POPULATION BIOLOGY 55: 166-175.
    PUB
     
  • [18]
    1999 | Sammelwerksbeitrag | PUB-ID: 1927777
    Gabriel W, Baake E (1999)
    Biological evolution through mutation, selection, and drift: An introductory review.
    In: in: Ann. Rev. Comp. Phys. VII (D. Stauffer, ed.), pp. 203-264 (World Scientific, Singapore, 2000). .
    PUB | arXiv
     
  • [17]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378116
    Baake E (1998)
    What can and what cannot be inferred from pairwise sequence comparisons?
    MATHEMATICAL BIOSCIENCES 154: 1-21.
    PUB
     
  • [16]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378123
    Wagner H, Baake E, Gerisch T (1998)
    Ising quantum chain and sequence evolution.
    JOURNAL OF STATISTICAL PHYSICS 92(5/6): 1017-1052.
    PUB
     
  • [15]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378127
    Baake E, Baake M, Wagner H (1998)
    Quantum mechanics versus classical probabilities in biological evolution.
    PHYSICAL REVIEW E 57(1): 1191-1192.
    PUB
     
  • [14]
    1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378442
    Wagner H, Baake E (1997)
    Ising quantum chain and biological evolution.
    In: Physical Applications and Mathematical Aspects of Geometry, Groups and Algebras. Doebner H-D, Nattermann P, Scherer W (Eds);II. Singapore: World Scientific: 821-825.
    PUB
     
  • [13]
    1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378376
    Baake E, Baake M, Wagner H (1997)
    Ising quantum chain is equivalent to a model of biological evolution.
    PHYSICAL REVIEW LETTERS 78: 559-562.
    PUB
     
  • [12]
    1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378438
    Baake E (1997)
    Diploid sequence space, dominance, and evolution.
    In: Advances in Mathematical Population Dynamics - Molecules, Cells and Man. Arino O, Axelrod D, Kimmel M (Eds); Singapore: World Scientific: 1-15.
    PUB
     
  • [11]
    1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378139
    Baake E, Wiehe T (1997)
    Bifurcations in haploid and diploid sequence space models.
    JOURNAL OF MATHEMATICAL BIOLOGY 35(3): 321-343.
    PUB
     
  • [10]
    1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378431
    Baake E (1995)
    Diploid models on sequence space.
    JOURNAL OF BIOLOGICAL SYSTEMS 3: 343-349.
    PUB
     
  • [9]
    1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378422
    Wiehe T, Baake E, Schuster P (1995)
    Error propagation in reproduction of diploid organisms. A case study on single peaked landscapes.
    JOURNAL OF THEORETICAL BIOLOGY 177: 1-15.
    PUB
     
  • [8]
    1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775603 OA
    Baake M, Baake E, Eich E (1993)
    On the role of invariants for the parameter estimation problem in Hamiltonian systems.
    Physics letters 180(1-2): 74-82.
    PUB | PDF | DOI | WoS
     
  • [7]
    1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775599 OA
    Baake E, Baake M, Bock HG, Briggs KM (1992)
    Fitting ordinary differential equations to chaotic data.
    Physical Review A 45(8): 5524-5529.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775596 OA
    Baake E, Schlöder JP (1992)
    Modelling the fast fluorescence rise of photosynthesis.
    Bulletin of mathematical biology 54(6): 999-1021.
    PUB | PDF | DOI | WoS
     
  • [5]
    1990 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378459
    Baake E, Strasser RJ (1990)
    A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves.
    In: Current Research in Photosynthesis. Baltscheffsky M (Ed); Dordrecht: Kluwer: 443-449.
    PUB
     
  • [4]
    1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775593 OA
    Pfündel E, Baake E (1990)
    A quantitative description of fluorescence excitation spectra in intact bean leaves greened under intermittent light.
    Photosynthesis Research 26(1): 19-28.
    PUB | PDF | DOI
     
  • [3]
    1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378482
    Baake E, Strasser RJ (1989)
    A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves.
    PHYSIOLOGIA PLANTARUM 76.
    PUB
     
  • [2]
    1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785358 OA
    Buff E, Baake M, Sievers A (1987)
    An Empirical Function for the Description of Root Growth.
    Plant Physiology 83(3): 685-690.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785355 OA
    Baake M, Buff E (1986)
    From cell growth to root growth.
    Journal of Theoretical Biology 123(3): 347-365.
    PUB | PDF | DOI | WoS
     

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