PUB - Publikationen an der Universität Bielefeld

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• [55]
  

  2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2989114

  E. Baake, F. Cordero, and E. Di Gaspero, “The mutation process on the ancestral line under selection.”, Theoretical population biology, 2024.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [54]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979037

  E. Baake, L. Esercito, and S. Hummel, “Lines of descent in a Moran model with frequency-dependent selection and mutation”, Stochastic Processes and their Applications, 2023, 160, 409-457.

  PUB | DOI | WoS
   
• [53]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965524

  E. Baake, F. Cordero, and S. Hummel, “Lines of descent in the deterministic mutation–selection model with pairwise interaction”, Annals of Applied Probability, 2022, 32, 2400-2447.

  PUB | DOI | WoS
   
• [52]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953579

  F. Alberti, E. Baake, I. Letter, and S. Martinez, “Solving the migration-recombination equation from a genealogical point of view”, Journal of mathematical biology, 2021, 82, : 41 .

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [51]
  

  2021 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2957507

  F. Alberti, C. Herrmann, and E. Baake, “Selection, recombination, and the ancestral initiation graph”, Theoretical population biology, In Press.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [50]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957017

  F. Alberti, and E. Baake, “Solving the Selection-Recombination Equation: Ancestral Lines and Dual Processes”, Documenta Mathematica , 2021, 26, 743-793.

  PUB | DOI | WoS
   
• [49]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936339

  E. Baake, A. Gonzalez Casanova, S. Probst, and A. Wakolbinger, “Modelling and simulating Lenski's long-term evolution experiment”, THEORETICAL POPULATION BIOLOGY, 2019, 127, 58-74.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [48]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931242

  E. Baake, F. Cordero, and S. Hummel, “A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent”, JOURNAL OF MATHEMATICAL BIOLOGY, 2018, 77, 795-820.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [47]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920936

  E. Baake, and A. Wakolbinger, “Lines of Descent Under Selection”, JOURNAL OF STATISTICAL PHYSICS, 2018, 172, 156-174.

  PUB | DOI | WoS
   
• [46]
  

  2017 | Preprint | PUB-ID: 2908549

  E. Baake, and M. Esser, “Fragmentation process, pruning poset for rooted forests, and Möbius inversion”, arXiv:1702.03173, 2017.

  PUB | Download (ext.) | arXiv
   
• [45]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2780316

  E. Baake, M. Baake, and M. Salamat, “The general recombination equation in continuous time and its solution”, Discrete and Continuous Dynamical Systems, 2016, 36, 63-95.

  PUB | DOI | WoS
   
• [44]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908021

  E. Baake, and M. Baake, “Haldane linearisation done right: Solving the nonlinear recombination equation the easy way”, Discrete and Continuous Dynamical Systems. A, 2016, 36, 6645-6656.

  PUB | DOI | WoS | arXiv
   
• [43]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908405

  E. Baake, U. Lenz, and A. Wakolbinger, “The common ancestor type distribution of a $\Lambda$-Wright-Fisher process with selection and mutation”, Electronic Communications in Probability, 2016, 21, : 59.

  PUB | DOI | WoS
   
• [42]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904686

  M. Esser, S. Probst, and E. Baake, “Partitioning, duality, and linkage disequilibria in the Moran model with recombination”, JOURNAL OF MATHEMATICAL BIOLOGY, 2016, 73, 161-197.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [41]
  

  2015 | Preprint | PUB-ID: 2908408

  E. Baake, and A. Wakolbinger, “Feller's Contributions to Mathematical Biology”, arXiv:1501.05278, 2015.

  PUB | arXiv
   
• [40]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766816

  U. Lenz, S. Kluth, E. Baake, and A. Wakolbinger, “Looking down in the ancestral selection graph: A probabilistic approach to the common ancestor type distribution”, Theoretical Population Biology, 2015, 103, 27-37.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [39]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677355

  E. Baake, and U. von Wangenheim, “Single-crossover recombination and ancestral recombination trees”, Journal of Mathematical Biology, 2014, 68, 1371-1402.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [38]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635471

  S. Kluth, T. Hustedt, and E. Baake, “The Common Ancestor Process Revisited”, Bulletin Of Mathematical Biology, 2013, 75, 2003-2027.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [37]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645211

  S. Kluth, and E. Baake, “The Moran model with selection: Fixation probabilities, ancestral lines, and an alternative particle representation”, Theoretical Population Biology, 2013, 90, 104-112.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [36]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377270

  E. Baake, and T. Hustedt, “Moment closure in a Moran model with recombination”, Markov Processes Relat. Fields, 2011, 17, 429-446.

  PUB | arXiv
   
• [35]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796454

  U. von Wangenheim, E. Baake, and M. Baake, “Single-crossover recombination in discrete time”, JOURNAL OF MATHEMATICAL BIOLOGY, 2010, 60, 727-760.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [34]
  

  2010 | Konferenzbeitrag | PUB-ID: 2377283

  E. Baake, in Proceedings of the International Congress of Mathematicians, Hyderabad 2010, ed. R. Bhatia, Hindustan Book Agency, New Delhi, Vol. IV, pp. 3038--3053, 2010.

  PUB | arXiv
   
• [33]
  

  2009 | Zeitschriftenaufsatz | PUB-ID: 2378093

  E. Baake, “Deterministic and stochastic aspects of recombination”, Oberwolfach Reports, 2009, 6, 1366.

  PUB
   
• [32]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635450

  F. Lipsmeier, and E. Baake, “Rare Event Simulation for T-cell Activation”, JOURNAL OF STATISTICAL PHYSICS, 2009, 134, 537-566.

  PUB | DOI | WoS
   
• [31]
  

  2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378061

  E. Baake, and F. Lipsmeier, in Proceedings of the 7th International Workshop on Rare Event Simulation RESIM 2008, Rennes, France, 2008.

  PUB
   
• [30]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630777

  E. Baake, and I. Herms, “Single-crossover dynamics: Finite versus infinite populations”, BULLETIN OF MATHEMATICAL BIOLOGY, 2008, 70, 603-624.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [29]
  

  2008 | Zeitschriftenaufsatz | PUB-ID: 1927750

  R. Bialowons, and E. Baake, “Ancestral processes with selection: Branching and Moran models”, Banach Center Publications, 2008, 80, 33-52.

  PUB | DOI | arXiv
   
• [28]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586423

  N. Zint, E. Baake, and F. den Hollander, “How T-cells use large deviations to recognize foreign antigens”, JOURNAL OF MATHEMATICAL BIOLOGY, 2008, 57, 841-861.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [27]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378105

  E. Baake, “Are mutations spontaneous or directed”, Nieuw Archief voor Wiskunde, 2007, 5/8, 171-174.

  PUB
   
• [26]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595869

  E. Baake, and H. - O. Georgii, “Mutation, selection, and ancestry in branching models: a variational approach”, JOURNAL OF MATHEMATICAL BIOLOGY, 2007, 54, 257-303.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [25]
  

  2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604953

  E. Baake, M. Baake, A. Bovier, and M. Klein, “An asymptotic maximum principle for essentially linear evolution models”, JOURNAL OF MATHEMATICAL BIOLOGY, 2005, 50, 83-114.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377274

  H. - O. Georgii, and E. Baake, “Supercritical multitype branching processes: the ancestral types of typical individuals”, Adv. Appl. Prob. 35 (2003), 1090-1110, 2003.

  PUB | arXiv
   
• [23]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1927781

  M. Baake, and E. Baake, “An exactly solved model for mutation, recombination and selection”, Canadian Journal of Mathematics, 2003, 55, 3-41.

  PUB | DOI | WoS | arXiv
   
• [22]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613803

  J. Hermisson, O. Redner, H. Wagner, and E. Baake, “Mutation-selection balance: Ancestry, load, and maximum principle”, THEORETICAL POPULATION BIOLOGY, 2002, 62, 9-46.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377995

  E. Baake, and H. Wagner, “Mutation-selection models solved exactly with methods of statistical mechanics”, GENETICS RESEARCH, 2001, 78, 93-117.

  PUB
   
• [20]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378040

  E. Baake, “Mutation and recombination with tight linkage”, JOURNAL OF MATHEMATICAL BIOLOGY, 2001, 42, 455-488.

  PUB
   
• [19]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378046

  E. Baake, and A. von Haeseler, “Distance measures in terms of substitution processes”, THEORETICAL POPULATION BIOLOGY, 1999, 55, 166-175.

  PUB
   
• [18]
  

  1999 | Sammelwerksbeitrag | PUB-ID: 1927777

  W. Gabriel, and E. Baake, in in: Ann. Rev. Comp. Phys. VII (D. Stauffer, ed.), pp. 203-264 (World Scientific, Singapore, 2000), 1999.

  PUB | arXiv
   
• [17]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378116

  E. Baake, “What can and what cannot be inferred from pairwise sequence comparisons?”, MATHEMATICAL BIOSCIENCES, 1998, 154, 1-21.

  PUB
   
• [16]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378123

  H. Wagner, E. Baake, and T. Gerisch, “Ising quantum chain and sequence evolution”, JOURNAL OF STATISTICAL PHYSICS, 1998, 92, 1017-1052.

  PUB
   
• [15]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378127

  E. Baake, M. Baake, and H. Wagner, “Quantum mechanics versus classical probabilities in biological evolution”, PHYSICAL REVIEW E, 1998, 57, 1191-1192.

  PUB
   
• [14]
  

  1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378442

  H. Wagner, and E. Baake, in Physical Applications and Mathematical Aspects of Geometry, Groups and Algebras (Eds.: H.-D. Doebner, P. Nattermann, W. Scherer), World Scientific, Singapore, 1997, p. 821-825.

  PUB
   
• [13]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378376

  E. Baake, M. Baake, and H. Wagner, “Ising quantum chain is equivalent to a model of biological evolution”, PHYSICAL REVIEW LETTERS, 1997, 78, 559-562.

  PUB
   
• [12]
  

  1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378438

  E. Baake, in Advances in Mathematical Population Dynamics - Molecules, Cells and Man (Eds.: O. Arino, D. Axelrod, M. Kimmel), World Scientific, Singapore, 1997, p. 1-15.

  PUB
   
• [11]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378139

  E. Baake, and T. Wiehe, “Bifurcations in haploid and diploid sequence space models”, JOURNAL OF MATHEMATICAL BIOLOGY, 1997, 35, 321-343.

  PUB
   
• [10]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378431

  E. Baake, “Diploid models on sequence space”, JOURNAL OF BIOLOGICAL SYSTEMS, 1995, 3, 343-349.

  PUB
   
• [9]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378422

  T. Wiehe, E. Baake, and P. Schuster, “Error propagation in reproduction of diploid organisms. A case study on single peaked landscapes”, JOURNAL OF THEORETICAL BIOLOGY, 1995, 177, 1-15.

  PUB
   
• [8]
  

  1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775603

  M. Baake, E. Baake, and E. Eich, “On the role of invariants for the parameter estimation problem in Hamiltonian systems”, Physics letters, 1993, 180, 74-82.

  PUB | PDF | DOI | WoS
   
• [7]
  

  1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775599

  E. Baake, M. Baake, H. G. Bock, and K. M. Briggs, “Fitting ordinary differential equations to chaotic data”, Physical Review A, 1992, 45, 5524-5529.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [6]
  

  1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775596

  E. Baake, and J. P. Schlöder, “Modelling the fast fluorescence rise of photosynthesis”, Bulletin of mathematical biology, 1992, 54, 999-1021.

  PUB | PDF | DOI | WoS
   
• [5]
  

  1990 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378459

  E. Baake, and R. J. Strasser, in Current Research in Photosynthesis (Ed.: M. Baltscheffsky), Kluwer, Dordrecht, 1990, p. 443-449.

  PUB
   
• [4]
  

  1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775593

  E. Pfündel, and E. Baake, “A quantitative description of fluorescence excitation spectra in intact bean leaves greened under intermittent light”, Photosynthesis Research, 1990, 26, 19-28.

  PUB | PDF | DOI
   
• [3]
  

  1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378482

  E. Baake, and R. J. Strasser, “A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves”, PHYSIOLOGIA PLANTARUM, 1989, 76.

  PUB
   
• [2]
  

  1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785358

  E. Buff, M. Baake, and A. Sievers, “An Empirical Function for the Description of Root Growth”, Plant Physiology, 1987, 83, 685-690.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785355

  M. Baake, and E. Buff, “From cell growth to root growth”, Journal of Theoretical Biology, 1986, 123, 347-365.

  PUB | PDF | DOI | WoS