54 Publikationen

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  • [54]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979037
    Baake E, Esercito L, Hummel S. Lines of descent in a Moran model with frequency-dependent selection and mutation. Stochastic Processes and their Applications. 2023;160:409-457.
    PUB | DOI | WoS
     
  • [53]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965524
    Baake E, Cordero F, Hummel S. Lines of descent in the deterministic mutation–selection model with pairwise interaction. Annals of Applied Probability. 2022;32(4):2400-2447.
    PUB | DOI | WoS
     
  • [52]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953579 OA
    Alberti F, Baake E, Letter I, Martinez S. Solving the migration-recombination equation from a genealogical point of view. Journal of mathematical biology. 2021;82(5): 41 .
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [51]
    2021 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2957507
    Alberti F, Herrmann C, Baake E. Selection, recombination, and the ancestral initiation graph. Theoretical population biology. In Press.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [50]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957017
    Alberti F, Baake E. Solving the Selection-Recombination Equation: Ancestral Lines and Dual Processes. Documenta Mathematica . 2021;26:743-793.
    PUB | DOI | WoS
     
  • [49]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936339
    Baake E, Gonzalez Casanova A, Probst S, Wakolbinger A. Modelling and simulating Lenski's long-term evolution experiment. THEORETICAL POPULATION BIOLOGY. 2019;127:58-74.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [48]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931242
    Baake E, Cordero F, Hummel S. A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent. JOURNAL OF MATHEMATICAL BIOLOGY. 2018;77(3):795-820.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [47]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920936
    Baake E, Wakolbinger A. Lines of Descent Under Selection. JOURNAL OF STATISTICAL PHYSICS. 2018;172(1):156-174.
    PUB | DOI | WoS
     
  • [46]
    2017 | Preprint | PUB-ID: 2908549
    Baake E, Esser M. Fragmentation process, pruning poset for rooted forests, and Möbius inversion. arXiv:1702.03173. 2017.
    PUB | Download (ext.) | arXiv
     
  • [45]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2780316
    Baake E, Baake M, Salamat M. The general recombination equation in continuous time and its solution. Discrete and Continuous Dynamical Systems. 2016;36(1):63-95.
    PUB | DOI | WoS
     
  • [44]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908021
    Baake E, Baake M. Haldane linearisation done right: Solving the nonlinear recombination equation the easy way. Discrete and Continuous Dynamical Systems. A. 2016;36(12):6645-6656.
    PUB | DOI | WoS | arXiv
     
  • [43]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908405
    Baake E, Lenz U, Wakolbinger A. The common ancestor type distribution of a $\Lambda$-Wright-Fisher process with selection and mutation. Electronic Communications in Probability. 2016;21: 59.
    PUB | DOI | WoS
     
  • [42]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904686
    Esser M, Probst S, Baake E. Partitioning, duality, and linkage disequilibria in the Moran model with recombination. JOURNAL OF MATHEMATICAL BIOLOGY. 2016;73(1):161-197.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [41]
    2015 | Preprint | PUB-ID: 2908408
    Baake E, Wakolbinger A. Feller's Contributions to Mathematical Biology. arXiv:1501.05278. 2015.
    PUB | arXiv
     
  • [40]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766816
    Lenz U, Kluth S, Baake E, Wakolbinger A. Looking down in the ancestral selection graph: A probabilistic approach to the common ancestor type distribution. Theoretical Population Biology. 2015;103:27-37.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [39]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677355
    Baake E, von Wangenheim U. Single-crossover recombination and ancestral recombination trees. Journal of Mathematical Biology. 2014;68(6):1371-1402.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [38]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635471
    Kluth S, Hustedt T, Baake E. The Common Ancestor Process Revisited. Bulletin Of Mathematical Biology. 2013;75(11):2003-2027.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [37]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645211
    Kluth S, Baake E. The Moran model with selection: Fixation probabilities, ancestral lines, and an alternative particle representation. Theoretical Population Biology. 2013;90:104-112.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [36]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377270
    Baake E, Hustedt T. Moment closure in a Moran model with recombination. Markov Processes Relat. Fields. 2011;17(3):429-446.
    PUB | arXiv
     
  • [35]
    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796454
    von Wangenheim U, Baake E, Baake M. Single-crossover recombination in discrete time. JOURNAL OF MATHEMATICAL BIOLOGY. 2010;60(5):727-760.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [34]
    2010 | Konferenzbeitrag | PUB-ID: 2377283
    Baake E. Deterministic and stochastic aspects of single-crossover recombination. In: Proceedings of the International Congress of Mathematicians, Hyderabad 2010, ed. R. Bhatia, Hindustan Book Agency, New Delhi, Vol. IV, pp. 3038--3053. 2010.
    PUB | arXiv
     
  • [33]
    2009 | Zeitschriftenaufsatz | PUB-ID: 2378093
    Baake E. Deterministic and stochastic aspects of recombination. Oberwolfach Reports. 2009;6:1366.
    PUB
     
  • [32]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635450
    Lipsmeier F, Baake E. Rare Event Simulation for T-cell Activation. JOURNAL OF STATISTICAL PHYSICS. 2009;134(3):537-566.
    PUB | DOI | WoS
     
  • [31]
    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378061
    Baake E, Lipsmeier F. Rare event simulation in immunobiology. In: Proceedings of the 7th International Workshop on Rare Event Simulation RESIM 2008, Rennes, France. 2008.
    PUB
     
  • [30]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630777
    Baake E, Herms I. Single-crossover dynamics: Finite versus infinite populations. BULLETIN OF MATHEMATICAL BIOLOGY. 2008;70(2):603-624.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [29]
    2008 | Zeitschriftenaufsatz | PUB-ID: 1927750
    Bialowons R, Baake E. Ancestral processes with selection: Branching and Moran models. Banach Center Publications. 2008;80:33-52.
    PUB | DOI | arXiv
     
  • [28]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586423
    Zint N, Baake E, den Hollander F. How T-cells use large deviations to recognize foreign antigens. JOURNAL OF MATHEMATICAL BIOLOGY. 2008;57(6):841-861.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [27]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378105
    Baake E. Are mutations spontaneous or directed. Nieuw Archief voor Wiskunde. 2007;5/8(3):171-174.
    PUB
     
  • [26]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595869
    Baake E, Georgii H-O. Mutation, selection, and ancestry in branching models: a variational approach. JOURNAL OF MATHEMATICAL BIOLOGY. 2007;54(2):257-303.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [25]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604953
    Baake E, Baake M, Bovier A, Klein M. An asymptotic maximum principle for essentially linear evolution models. JOURNAL OF MATHEMATICAL BIOLOGY. 2005;50(1):83-114.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [24]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377274
    Georgii H-O, Baake E. Supercritical multitype branching processes: the ancestral types of typical individuals. Adv. Appl. Prob. 35 (2003), 1090-1110. 2003.
    PUB | arXiv
     
  • [23]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1927781
    Baake M, Baake E. An exactly solved model for mutation, recombination and selection. Canadian Journal of Mathematics. 2003;55(1):3-41.
    PUB | DOI | WoS | arXiv
     
  • [22]
    2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613803
    Hermisson J, Redner O, Wagner H, Baake E. Mutation-selection balance: Ancestry, load, and maximum principle. THEORETICAL POPULATION BIOLOGY. 2002;62(1):9-46.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377995
    Baake E, Wagner H. Mutation-selection models solved exactly with methods of statistical mechanics. GENETICS RESEARCH. 2001;78:93-117.
    PUB
     
  • [20]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378040
    Baake E. Mutation and recombination with tight linkage. JOURNAL OF MATHEMATICAL BIOLOGY. 2001;42:455-488.
    PUB
     
  • [19]
    1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378046
    Baake E, von Haeseler A. Distance measures in terms of substitution processes. THEORETICAL POPULATION BIOLOGY. 1999;55:166-175.
    PUB
     
  • [18]
    1999 | Sammelwerksbeitrag | PUB-ID: 1927777
    Gabriel W, Baake E. Biological evolution through mutation, selection, and drift: An introductory review. In: in: Ann. Rev. Comp. Phys. VII (D. Stauffer, ed.), pp. 203-264 (World Scientific, Singapore, 2000). 1999.
    PUB | arXiv
     
  • [17]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378116
    Baake E. What can and what cannot be inferred from pairwise sequence comparisons? MATHEMATICAL BIOSCIENCES. 1998;154:1-21.
    PUB
     
  • [16]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378123
    Wagner H, Baake E, Gerisch T. Ising quantum chain and sequence evolution. JOURNAL OF STATISTICAL PHYSICS. 1998;92(5/6):1017-1052.
    PUB
     
  • [15]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378127
    Baake E, Baake M, Wagner H. Quantum mechanics versus classical probabilities in biological evolution. PHYSICAL REVIEW E. 1998;57(1):1191-1192.
    PUB
     
  • [14]
    1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378442
    Wagner H, Baake E. Ising quantum chain and biological evolution. In: Doebner H-D, Nattermann P, Scherer W, eds. Physical Applications and Mathematical Aspects of Geometry, Groups and Algebras. Vol II. Singapore: World Scientific; 1997: 821-825.
    PUB
     
  • [13]
    1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378376
    Baake E, Baake M, Wagner H. Ising quantum chain is equivalent to a model of biological evolution. PHYSICAL REVIEW LETTERS. 1997;78:559-562.
    PUB
     
  • [12]
    1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378438
    Baake E. Diploid sequence space, dominance, and evolution. In: Arino O, Axelrod D, Kimmel M, eds. Advances in Mathematical Population Dynamics - Molecules, Cells and Man. Singapore: World Scientific; 1997: 1-15.
    PUB
     
  • [11]
    1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378139
    Baake E, Wiehe T. Bifurcations in haploid and diploid sequence space models. JOURNAL OF MATHEMATICAL BIOLOGY. 1997;35(3):321-343.
    PUB
     
  • [10]
    1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378431
    Baake E. Diploid models on sequence space. JOURNAL OF BIOLOGICAL SYSTEMS. 1995;3:343-349.
    PUB
     
  • [9]
    1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378422
    Wiehe T, Baake E, Schuster P. Error propagation in reproduction of diploid organisms. A case study on single peaked landscapes. JOURNAL OF THEORETICAL BIOLOGY. 1995;177:1-15.
    PUB
     
  • [8]
    1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775603 OA
    Baake M, Baake E, Eich E. On the role of invariants for the parameter estimation problem in Hamiltonian systems. Physics letters. 1993;180(1-2):74-82.
    PUB | PDF | DOI | WoS
     
  • [7]
    1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775599 OA
    Baake E, Baake M, Bock HG, Briggs KM. Fitting ordinary differential equations to chaotic data. Physical Review A. 1992;45(8):5524-5529.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775596 OA
    Baake E, Schlöder JP. Modelling the fast fluorescence rise of photosynthesis. Bulletin of mathematical biology. 1992;54(6):999-1021.
    PUB | PDF | DOI | WoS
     
  • [5]
    1990 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378459
    Baake E, Strasser RJ. A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves. In: Baltscheffsky M, ed. Current Research in Photosynthesis. Dordrecht: Kluwer; 1990: 443-449.
    PUB
     
  • [4]
    1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775593 OA
    Pfündel E, Baake E. A quantitative description of fluorescence excitation spectra in intact bean leaves greened under intermittent light. Photosynthesis Research. 1990;26(1):19-28.
    PUB | PDF | DOI
     
  • [3]
    1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378482
    Baake E, Strasser RJ. A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves. PHYSIOLOGIA PLANTARUM. 1989;76.
    PUB
     
  • [2]
    1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785358 OA
    Buff E, Baake M, Sievers A. An Empirical Function for the Description of Root Growth. Plant Physiology. 1987;83(3):685-690.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785355 OA
    Baake M, Buff E. From cell growth to root growth. Journal of Theoretical Biology. 1986;123(3):347-365.
    PUB | PDF | DOI | WoS
     

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