PUB - Publikationen an der Universität Bielefeld

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• [55]
  

  2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2989114

  Baake E, Cordero F, Di Gaspero E. The mutation process on the ancestral line under selection. Theoretical population biology. 2024.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [54]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979037

  Baake E, Esercito L, Hummel S. Lines of descent in a Moran model with frequency-dependent selection and mutation. Stochastic Processes and their Applications. 2023;160:409-457.

  PUB | DOI | WoS
   
• [53]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965524

  Baake E, Cordero F, Hummel S. Lines of descent in the deterministic mutation–selection model with pairwise interaction. Annals of Applied Probability. 2022;32(4):2400-2447.

  PUB | DOI | WoS
   
• [52]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953579

  Alberti F, Baake E, Letter I, Martinez S. Solving the migration-recombination equation from a genealogical point of view. Journal of mathematical biology. 2021;82(5): 41 .

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [51]
  

  2021 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2957507

  Alberti F, Herrmann C, Baake E. Selection, recombination, and the ancestral initiation graph. Theoretical population biology. In Press.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [50]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957017

  Alberti F, Baake E. Solving the Selection-Recombination Equation: Ancestral Lines and Dual Processes. Documenta Mathematica . 2021;26:743-793.

  PUB | DOI | WoS
   
• [49]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936339

  Baake E, Gonzalez Casanova A, Probst S, Wakolbinger A. Modelling and simulating Lenski's long-term evolution experiment. THEORETICAL POPULATION BIOLOGY. 2019;127:58-74.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [48]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931242

  Baake E, Cordero F, Hummel S. A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent. JOURNAL OF MATHEMATICAL BIOLOGY. 2018;77(3):795-820.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [47]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920936

  Baake E, Wakolbinger A. Lines of Descent Under Selection. JOURNAL OF STATISTICAL PHYSICS. 2018;172(1):156-174.

  PUB | DOI | WoS
   
• [46]
  

  2017 | Preprint | PUB-ID: 2908549

  Baake E, Esser M. Fragmentation process, pruning poset for rooted forests, and Möbius inversion. arXiv:1702.03173. 2017.

  PUB | Download (ext.) | arXiv
   
• [45]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2780316

  Baake E, Baake M, Salamat M. The general recombination equation in continuous time and its solution. Discrete and Continuous Dynamical Systems. 2016;36(1):63-95.

  PUB | DOI | WoS
   
• [44]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908021

  Baake E, Baake M. Haldane linearisation done right: Solving the nonlinear recombination equation the easy way. Discrete and Continuous Dynamical Systems. A. 2016;36(12):6645-6656.

  PUB | DOI | WoS | arXiv
   
• [43]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908405

  Baake E, Lenz U, Wakolbinger A. The common ancestor type distribution of a $\Lambda$-Wright-Fisher process with selection and mutation. Electronic Communications in Probability. 2016;21: 59.

  PUB | DOI | WoS
   
• [42]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904686

  Esser M, Probst S, Baake E. Partitioning, duality, and linkage disequilibria in the Moran model with recombination. JOURNAL OF MATHEMATICAL BIOLOGY. 2016;73(1):161-197.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [41]
  

  2015 | Preprint | PUB-ID: 2908408

  Baake E, Wakolbinger A. Feller's Contributions to Mathematical Biology. arXiv:1501.05278. 2015.

  PUB | arXiv
   
• [40]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766816

  Lenz U, Kluth S, Baake E, Wakolbinger A. Looking down in the ancestral selection graph: A probabilistic approach to the common ancestor type distribution. Theoretical Population Biology. 2015;103:27-37.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [39]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677355

  Baake E, von Wangenheim U. Single-crossover recombination and ancestral recombination trees. Journal of Mathematical Biology. 2014;68(6):1371-1402.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [38]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635471

  Kluth S, Hustedt T, Baake E. The Common Ancestor Process Revisited. Bulletin Of Mathematical Biology. 2013;75(11):2003-2027.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [37]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645211

  Kluth S, Baake E. The Moran model with selection: Fixation probabilities, ancestral lines, and an alternative particle representation. Theoretical Population Biology. 2013;90:104-112.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [36]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377270

  Baake E, Hustedt T. Moment closure in a Moran model with recombination. Markov Processes Relat. Fields. 2011;17(3):429-446.

  PUB | arXiv
   
• [35]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796454

  von Wangenheim U, Baake E, Baake M. Single-crossover recombination in discrete time. JOURNAL OF MATHEMATICAL BIOLOGY. 2010;60(5):727-760.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [34]
  

  2010 | Konferenzbeitrag | PUB-ID: 2377283

  Baake E. Deterministic and stochastic aspects of single-crossover recombination. In: Proceedings of the International Congress of Mathematicians, Hyderabad 2010, ed. R. Bhatia, Hindustan Book Agency, New Delhi, Vol. IV, pp. 3038--3053. 2010.

  PUB | arXiv
   
• [33]
  

  2009 | Zeitschriftenaufsatz | PUB-ID: 2378093

  Baake E. Deterministic and stochastic aspects of recombination. Oberwolfach Reports. 2009;6:1366.

  PUB
   
• [32]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635450

  Lipsmeier F, Baake E. Rare Event Simulation for T-cell Activation. JOURNAL OF STATISTICAL PHYSICS. 2009;134(3):537-566.

  PUB | DOI | WoS
   
• [31]
  

  2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378061

  Baake E, Lipsmeier F. Rare event simulation in immunobiology. In: Proceedings of the 7th International Workshop on Rare Event Simulation RESIM 2008, Rennes, France. 2008.

  PUB
   
• [30]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630777

  Baake E, Herms I. Single-crossover dynamics: Finite versus infinite populations. BULLETIN OF MATHEMATICAL BIOLOGY. 2008;70(2):603-624.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [29]
  

  2008 | Zeitschriftenaufsatz | PUB-ID: 1927750

  Bialowons R, Baake E. Ancestral processes with selection: Branching and Moran models. Banach Center Publications. 2008;80:33-52.

  PUB | DOI | arXiv
   
• [28]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586423

  Zint N, Baake E, den Hollander F. How T-cells use large deviations to recognize foreign antigens. JOURNAL OF MATHEMATICAL BIOLOGY. 2008;57(6):841-861.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [27]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378105

  Baake E. Are mutations spontaneous or directed. Nieuw Archief voor Wiskunde. 2007;5/8(3):171-174.

  PUB
   
• [26]
  

  2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595869

  Baake E, Georgii H-O. Mutation, selection, and ancestry in branching models: a variational approach. JOURNAL OF MATHEMATICAL BIOLOGY. 2007;54(2):257-303.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [25]
  

  2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604953

  Baake E, Baake M, Bovier A, Klein M. An asymptotic maximum principle for essentially linear evolution models. JOURNAL OF MATHEMATICAL BIOLOGY. 2005;50(1):83-114.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [24]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377274

  Georgii H-O, Baake E. Supercritical multitype branching processes: the ancestral types of typical individuals. Adv. Appl. Prob. 35 (2003), 1090-1110. 2003.

  PUB | arXiv
   
• [23]
  

  2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1927781

  Baake M, Baake E. An exactly solved model for mutation, recombination and selection. Canadian Journal of Mathematics. 2003;55(1):3-41.

  PUB | DOI | WoS | arXiv
   
• [22]
  

  2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613803

  Hermisson J, Redner O, Wagner H, Baake E. Mutation-selection balance: Ancestry, load, and maximum principle. THEORETICAL POPULATION BIOLOGY. 2002;62(1):9-46.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377995

  Baake E, Wagner H. Mutation-selection models solved exactly with methods of statistical mechanics. GENETICS RESEARCH. 2001;78:93-117.

  PUB
   
• [20]
  

  2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378040

  Baake E. Mutation and recombination with tight linkage. JOURNAL OF MATHEMATICAL BIOLOGY. 2001;42:455-488.

  PUB
   
• [19]
  

  1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378046

  Baake E, von Haeseler A. Distance measures in terms of substitution processes. THEORETICAL POPULATION BIOLOGY. 1999;55:166-175.

  PUB
   
• [18]
  

  1999 | Sammelwerksbeitrag | PUB-ID: 1927777

  Gabriel W, Baake E. Biological evolution through mutation, selection, and drift: An introductory review. In: in: Ann. Rev. Comp. Phys. VII (D. Stauffer, ed.), pp. 203-264 (World Scientific, Singapore, 2000). 1999.

  PUB | arXiv
   
• [17]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378116

  Baake E. What can and what cannot be inferred from pairwise sequence comparisons? MATHEMATICAL BIOSCIENCES. 1998;154:1-21.

  PUB
   
• [16]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378123

  Wagner H, Baake E, Gerisch T. Ising quantum chain and sequence evolution. JOURNAL OF STATISTICAL PHYSICS. 1998;92(5/6):1017-1052.

  PUB
   
• [15]
  

  1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378127

  Baake E, Baake M, Wagner H. Quantum mechanics versus classical probabilities in biological evolution. PHYSICAL REVIEW E. 1998;57(1):1191-1192.

  PUB
   
• [14]
  

  1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378442

  Wagner H, Baake E. Ising quantum chain and biological evolution. In: Doebner H-D, Nattermann P, Scherer W, eds. Physical Applications and Mathematical Aspects of Geometry, Groups and Algebras. Vol II. Singapore: World Scientific; 1997: 821-825.

  PUB
   
• [13]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378376

  Baake E, Baake M, Wagner H. Ising quantum chain is equivalent to a model of biological evolution. PHYSICAL REVIEW LETTERS. 1997;78:559-562.

  PUB
   
• [12]
  

  1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378438

  Baake E. Diploid sequence space, dominance, and evolution. In: Arino O, Axelrod D, Kimmel M, eds. Advances in Mathematical Population Dynamics - Molecules, Cells and Man. Singapore: World Scientific; 1997: 1-15.

  PUB
   
• [11]
  

  1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378139

  Baake E, Wiehe T. Bifurcations in haploid and diploid sequence space models. JOURNAL OF MATHEMATICAL BIOLOGY. 1997;35(3):321-343.

  PUB
   
• [10]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378431

  Baake E. Diploid models on sequence space. JOURNAL OF BIOLOGICAL SYSTEMS. 1995;3:343-349.

  PUB
   
• [9]
  

  1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378422

  Wiehe T, Baake E, Schuster P. Error propagation in reproduction of diploid organisms. A case study on single peaked landscapes. JOURNAL OF THEORETICAL BIOLOGY. 1995;177:1-15.

  PUB
   
• [8]
  

  1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775603

  Baake M, Baake E, Eich E. On the role of invariants for the parameter estimation problem in Hamiltonian systems. Physics letters. 1993;180(1-2):74-82.

  PUB | PDF | DOI | WoS
   
• [7]
  

  1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775599

  Baake E, Baake M, Bock HG, Briggs KM. Fitting ordinary differential equations to chaotic data. Physical Review A. 1992;45(8):5524-5529.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [6]
  

  1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775596

  Baake E, Schlöder JP. Modelling the fast fluorescence rise of photosynthesis. Bulletin of mathematical biology. 1992;54(6):999-1021.

  PUB | PDF | DOI | WoS
   
• [5]
  

  1990 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378459

  Baake E, Strasser RJ. A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves. In: Baltscheffsky M, ed. Current Research in Photosynthesis. Dordrecht: Kluwer; 1990: 443-449.

  PUB
   
• [4]
  

  1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775593

  Pfündel E, Baake E. A quantitative description of fluorescence excitation spectra in intact bean leaves greened under intermittent light. Photosynthesis Research. 1990;26(1):19-28.

  PUB | PDF | DOI
   
• [3]
  

  1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378482

  Baake E, Strasser RJ. A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves. PHYSIOLOGIA PLANTARUM. 1989;76.

  PUB
   
• [2]
  

  1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785358

  Buff E, Baake M, Sievers A. An Empirical Function for the Description of Root Growth. Plant Physiology. 1987;83(3):685-690.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785355

  Baake M, Buff E. From cell growth to root growth. Journal of Theoretical Biology. 1986;123(3):347-365.

  PUB | PDF | DOI | WoS