54 Publikationen

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  • [54]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979037
    Baake, E., Esercito, L., and Hummel, S. (2023). Lines of descent in a Moran model with frequency-dependent selection and mutation. Stochastic Processes and their Applications 160, 409-457.
    PUB | DOI | WoS
     
  • [53]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965524
    Baake, E., Cordero, F., and Hummel, S. (2022). Lines of descent in the deterministic mutation–selection model with pairwise interaction. Annals of Applied Probability 32, 2400-2447.
    PUB | DOI | WoS
     
  • [52]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2953579 OA
    Alberti, F., Baake, E., Letter, I., and Martinez, S. (2021). Solving the migration-recombination equation from a genealogical point of view. Journal of mathematical biology 82:41 .
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [51]
    2021 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2957507
    Alberti, F., Herrmann, C., and Baake, E. (In Press). Selection, recombination, and the ancestral initiation graph. Theoretical population biology.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [50]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957017
    Alberti, F., and Baake, E. (2021). Solving the Selection-Recombination Equation: Ancestral Lines and Dual Processes. Documenta Mathematica 26, 743-793.
    PUB | DOI | WoS
     
  • [49]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936339
    Baake, E., Gonzalez Casanova, A., Probst, S., and Wakolbinger, A. (2019). Modelling and simulating Lenski's long-term evolution experiment. THEORETICAL POPULATION BIOLOGY 127, 58-74.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [48]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931242
    Baake, E., Cordero, F., and Hummel, S. (2018). A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent. JOURNAL OF MATHEMATICAL BIOLOGY 77, 795-820.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [47]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920936
    Baake, E., and Wakolbinger, A. (2018). Lines of Descent Under Selection. JOURNAL OF STATISTICAL PHYSICS 172, 156-174.
    PUB | DOI | WoS
     
  • [46]
    2017 | Preprint | PUB-ID: 2908549
    Baake, E., and Esser, M. (2017). Fragmentation process, pruning poset for rooted forests, and Möbius inversion. arXiv:1702.03173.
    PUB | Download (ext.) | arXiv
     
  • [45]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2780316
    Baake, E., Baake, M., and Salamat, M. (2016). The general recombination equation in continuous time and its solution. Discrete and Continuous Dynamical Systems 36, 63-95.
    PUB | DOI | WoS
     
  • [44]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908021
    Baake, E., and Baake, M. (2016). Haldane linearisation done right: Solving the nonlinear recombination equation the easy way. Discrete and Continuous Dynamical Systems. A 36, 6645-6656.
    PUB | DOI | WoS | arXiv
     
  • [43]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908405
    Baake, E., Lenz, U., and Wakolbinger, A. (2016). The common ancestor type distribution of a $\Lambda$-Wright-Fisher process with selection and mutation. Electronic Communications in Probability 21:59.
    PUB | DOI | WoS
     
  • [42]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904686
    Esser, M., Probst, S., and Baake, E. (2016). Partitioning, duality, and linkage disequilibria in the Moran model with recombination. JOURNAL OF MATHEMATICAL BIOLOGY 73, 161-197.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [41]
    2015 | Preprint | PUB-ID: 2908408
    Baake, E., and Wakolbinger, A. (2015). Feller's Contributions to Mathematical Biology. arXiv:1501.05278.
    PUB | arXiv
     
  • [40]
    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766816
    Lenz, U., Kluth, S., Baake, E., and Wakolbinger, A. (2015). Looking down in the ancestral selection graph: A probabilistic approach to the common ancestor type distribution. Theoretical Population Biology 103, 27-37.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [39]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677355
    Baake, E., and von Wangenheim, U. (2014). Single-crossover recombination and ancestral recombination trees. Journal of Mathematical Biology 68, 1371-1402.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [38]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635471
    Kluth, S., Hustedt, T., and Baake, E. (2013). The Common Ancestor Process Revisited. Bulletin Of Mathematical Biology 75, 2003-2027.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [37]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645211
    Kluth, S., and Baake, E. (2013). The Moran model with selection: Fixation probabilities, ancestral lines, and an alternative particle representation. Theoretical Population Biology 90, 104-112.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [36]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377270
    Baake, E., and Hustedt, T. (2011). Moment closure in a Moran model with recombination. Markov Processes Relat. Fields 17, 429-446.
    PUB | arXiv
     
  • [35]
    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796454
    von Wangenheim, U., Baake, E., and Baake, M. (2010). Single-crossover recombination in discrete time. JOURNAL OF MATHEMATICAL BIOLOGY 60, 727-760.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [34]
    2010 | Konferenzbeitrag | PUB-ID: 2377283
    Baake, E. (2010). “Deterministic and stochastic aspects of single-crossover recombination” in Proceedings of the International Congress of Mathematicians, Hyderabad 2010, ed. R. Bhatia, Hindustan Book Agency, New Delhi, Vol. IV, pp. 3038--3053.
    PUB | arXiv
     
  • [33]
    2009 | Zeitschriftenaufsatz | PUB-ID: 2378093
    Baake, E. (2009). Deterministic and stochastic aspects of recombination. Oberwolfach Reports 6, 1366.
    PUB
     
  • [32]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635450
    Lipsmeier, F., and Baake, E. (2009). Rare Event Simulation for T-cell Activation. JOURNAL OF STATISTICAL PHYSICS 134, 537-566.
    PUB | DOI | WoS
     
  • [31]
    2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2378061
    Baake, E., and Lipsmeier, F. (2008). “Rare event simulation in immunobiology” in Proceedings of the 7th International Workshop on Rare Event Simulation RESIM 2008, Rennes, France.
    PUB
     
  • [30]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1630777
    Baake, E., and Herms, I. (2008). Single-crossover dynamics: Finite versus infinite populations. BULLETIN OF MATHEMATICAL BIOLOGY 70, 603-624.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [29]
    2008 | Zeitschriftenaufsatz | PUB-ID: 1927750
    Bialowons, R., and Baake, E. (2008). Ancestral processes with selection: Branching and Moran models. Banach Center Publications 80, 33-52.
    PUB | DOI | arXiv
     
  • [28]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586423
    Zint, N., Baake, E., and den Hollander, F. (2008). How T-cells use large deviations to recognize foreign antigens. JOURNAL OF MATHEMATICAL BIOLOGY 57, 841-861.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [27]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378105
    Baake, E. (2007). Are mutations spontaneous or directed. Nieuw Archief voor Wiskunde 5/8, 171-174.
    PUB
     
  • [26]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595869
    Baake, E., and Georgii, H. - O. (2007). Mutation, selection, and ancestry in branching models: a variational approach. JOURNAL OF MATHEMATICAL BIOLOGY 54, 257-303.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [25]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604953
    Baake, E., Baake, M., Bovier, A., and Klein, M. (2005). An asymptotic maximum principle for essentially linear evolution models. JOURNAL OF MATHEMATICAL BIOLOGY 50, 83-114.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [24]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377274
    Georgii, H. - O., and Baake, E. (2003). Supercritical multitype branching processes: the ancestral types of typical individuals. Adv. Appl. Prob. 35 (2003), 1090-1110.
    PUB | arXiv
     
  • [23]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1927781
    Baake, M., and Baake, E. (2003). An exactly solved model for mutation, recombination and selection. Canadian Journal of Mathematics 55, 3-41.
    PUB | DOI | WoS | arXiv
     
  • [22]
    2002 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1613803
    Hermisson, J., Redner, O., Wagner, H., and Baake, E. (2002). Mutation-selection balance: Ancestry, load, and maximum principle. THEORETICAL POPULATION BIOLOGY 62, 9-46.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2377995
    Baake, E., and Wagner, H. (2001). Mutation-selection models solved exactly with methods of statistical mechanics. GENETICS RESEARCH 78, 93-117.
    PUB
     
  • [20]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378040
    Baake, E. (2001). Mutation and recombination with tight linkage. JOURNAL OF MATHEMATICAL BIOLOGY 42, 455-488.
    PUB
     
  • [19]
    1999 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378046
    Baake, E., and von Haeseler, A. (1999). Distance measures in terms of substitution processes. THEORETICAL POPULATION BIOLOGY 55, 166-175.
    PUB
     
  • [18]
    1999 | Sammelwerksbeitrag | PUB-ID: 1927777
    Gabriel, W., and Baake, E. (1999). “Biological evolution through mutation, selection, and drift: An introductory review” in in: Ann. Rev. Comp. Phys. VII (D. Stauffer, ed.), pp. 203-264 (World Scientific, Singapore, 2000).
    PUB | arXiv
     
  • [17]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378116
    Baake, E. (1998). What can and what cannot be inferred from pairwise sequence comparisons? MATHEMATICAL BIOSCIENCES 154, 1-21.
    PUB
     
  • [16]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378123
    Wagner, H., Baake, E., and Gerisch, T. (1998). Ising quantum chain and sequence evolution. JOURNAL OF STATISTICAL PHYSICS 92, 1017-1052.
    PUB
     
  • [15]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378127
    Baake, E., Baake, M., and Wagner, H. (1998). Quantum mechanics versus classical probabilities in biological evolution. PHYSICAL REVIEW E 57, 1191-1192.
    PUB
     
  • [14]
    1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378442
    Wagner, H., and Baake, E. (1997). “Ising quantum chain and biological evolution” in Physical Applications and Mathematical Aspects of Geometry, Groups and Algebras, Doebner, H. - D., Nattermann, P., and Scherer, W. eds., vol. II, (Singapore: World Scientific), 821-825.
    PUB
     
  • [13]
    1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378376
    Baake, E., Baake, M., and Wagner, H. (1997). Ising quantum chain is equivalent to a model of biological evolution. PHYSICAL REVIEW LETTERS 78, 559-562.
    PUB
     
  • [12]
    1997 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378438
    Baake, E. (1997). “Diploid sequence space, dominance, and evolution” in Advances in Mathematical Population Dynamics - Molecules, Cells and Man, Arino, O., Axelrod, D., and Kimmel, M. eds. (Singapore: World Scientific), 1-15.
    PUB
     
  • [11]
    1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378139
    Baake, E., and Wiehe, T. (1997). Bifurcations in haploid and diploid sequence space models. JOURNAL OF MATHEMATICAL BIOLOGY 35, 321-343.
    PUB
     
  • [10]
    1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378431
    Baake, E. (1995). Diploid models on sequence space. JOURNAL OF BIOLOGICAL SYSTEMS 3, 343-349.
    PUB
     
  • [9]
    1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378422
    Wiehe, T., Baake, E., and Schuster, P. (1995). Error propagation in reproduction of diploid organisms. A case study on single peaked landscapes. JOURNAL OF THEORETICAL BIOLOGY 177, 1-15.
    PUB
     
  • [8]
    1993 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775603 OA
    Baake, M., Baake, E., and Eich, E. (1993). On the role of invariants for the parameter estimation problem in Hamiltonian systems. Physics letters 180, 74-82.
    PUB | PDF | DOI | WoS
     
  • [7]
    1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775599 OA
    Baake, E., Baake, M., Bock, H. G., and Briggs, K. M. (1992). Fitting ordinary differential equations to chaotic data. Physical Review A 45, 5524-5529.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    1992 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775596 OA
    Baake, E., and Schlöder, J. P. (1992). Modelling the fast fluorescence rise of photosynthesis. Bulletin of mathematical biology 54, 999-1021.
    PUB | PDF | DOI | WoS
     
  • [5]
    1990 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2378459
    Baake, E., and Strasser, R. J. (1990). “A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves” in Current Research in Photosynthesis, Baltscheffsky, M. ed. (Dordrecht: Kluwer), 443-449.
    PUB
     
  • [4]
    1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775593 OA
    Pfündel, E., and Baake, E. (1990). A quantitative description of fluorescence excitation spectra in intact bean leaves greened under intermittent light. Photosynthesis Research 26, 19-28.
    PUB | PDF | DOI
     
  • [3]
    1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2378482
    Baake, E., and Strasser, R. J. (1989). A differential equation model for the description of the fast fluorescence rise (O-I-D-P-transient) in leaves. PHYSIOLOGIA PLANTARUM 76.
    PUB
     
  • [2]
    1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785358 OA
    Buff, E., Baake, M., and Sievers, A. (1987). An Empirical Function for the Description of Root Growth. Plant Physiology 83, 685-690.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    1986 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785355 OA
    Baake, M., and Buff, E. (1986). From cell growth to root growth. Journal of Theoretical Biology 123, 347-365.
    PUB | PDF | DOI | WoS
     

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