41 Publikationen
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964311
MetHoS: a platform for large-scale processing, storage and analysis of metabolomics dataPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Tzanakis, Konstantinos, MetHoS: a platform for large-scale processing, storage and analysis of metabolomics data. BMC Bioinformatics 23 (1). , 2022 -
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965966Proteome Turnover Analysis in Haloferax volcanii by a Heavy Isotope Multilabeling ApproachPUB | DOI | PubMed | Europe PMC
Paggi, Roberto A, Proteome Turnover Analysis in Haloferax volcanii by a Heavy Isotope Multilabeling Approach. Methods in Molecular Biology 2522 (). , 2022 -
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2960640
Functional genomics uncovers pleiotropic role of rhomboids in Corynebacterium glutamicumPUB | PDF | DOI | WoS | PubMed | Europe PMC
Luenenschloss, Andrea, Functional genomics uncovers pleiotropic role of rhomboids in Corynebacterium glutamicum. Frontiers in Microbiology 13 (). , 2022 -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957358A targeted transcriptomics approach for the determination of mixture effects of pesticidesPUB | DOI | WoS | PubMed | Europe PMC
Lichtenstein, Dajana, A targeted transcriptomics approach for the determination of mixture effects of pesticides. Toxicology 460 (). , 2021 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076
Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant GenesPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Sielemann, Katharina, Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes. Genes 11 (12). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950242Transcript and protein marker patterns for the identification of steatotic compounds in human HepaRG cellsPUB | DOI | WoS | PubMed | Europe PMC
Lichtenstein, Dajana, Transcript and protein marker patterns for the identification of steatotic compounds in human HepaRG cells. Food and Chemical Toxicology 145 (). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941248RNA-PROTEIN CORRELATION OF LIVER TOXICITY MARKERS IN HEPARG CELLSPUB | DOI | WoS | PubMed | Europe PMC
Braeuning, Albert, RNA-PROTEIN CORRELATION OF LIVER TOXICITY MARKERS IN HEPARG CELLS. EXCLI JOURNAL 19 (). , 2020 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936490Assessment of mixture toxicity of (tri)azoles and their hepatotoxic effects in vitro by means of omics technologies.PUB | DOI | WoS | PubMed | Europe PMC
Seeger, Bettina, Assessment of mixture toxicity of (tri)azoles and their hepatotoxic effects in vitro by means of omics technologies.. Archives of toxicology 93 (8). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933518Early Response of Sulfolobus acidocaldarius to Nutrient LimitationPUB | DOI | WoS | PubMed | Europe PMC
Bischof, Lisa F., Early Response of Sulfolobus acidocaldarius to Nutrient Limitation. FRONTIERS IN MICROBIOLOGY 9 (). , 2019 -
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937250Clonal variations in CHO IGF signaling investigated by SILAC-based phosphoproteomics and LFQ-MSPUB | DOI | WoS | PubMed | Europe PMC
Schelletter, Louise, Clonal variations in CHO IGF signaling investigated by SILAC-based phosphoproteomics and LFQ-MS. Applied microbiology and biotechnology 103 (19). , 2019 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920330An sRNA and Cold Shock Protein Homolog-Based Feedforward Loop Post-transcriptionally Controls Cell Cycle Master Regulator CtrAPUB | DOI | WoS | PubMed | Europe PMC
Robledo, Marta, An sRNA and Cold Shock Protein Homolog-Based Feedforward Loop Post-transcriptionally Controls Cell Cycle Master Regulator CtrA. FRONTIERS IN MICROBIOLOGY 9 (). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919012Flexible metagenome analysis using the MGX frameworkPUB | DOI | WoS | PubMed | Europe PMC
Jaenicke, Sebastian, Flexible metagenome analysis using the MGX framework. Microbiome 6 (1). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919065LonB Protease Is a Novel Regulator of Carotenogenesis Controlling Degradation of Phytoene Synthase in Haloferax volcaniiPUB | DOI | WoS | PubMed | Europe PMC
Cerletti, Micaela, LonB Protease Is a Novel Regulator of Carotenogenesis Controlling Degradation of Phytoene Synthase in Haloferax volcanii. JOURNAL OF PROTEOME RESEARCH 17 (3). , 2018 -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556Bioinformatics for NGS-based metagenomics and the application to biogas researchPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Jünemann, Sebastian, Bioinformatics for NGS-based metagenomics and the application to biogas research. Journal of Biotechnology 261 (SI). , 2017 -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911396Label-free protein quantification of sodium butyrate treated CHO cells by ESI-UHR-TOF-MSPUB | DOI | WoS | PubMed | Europe PMC
Müller, B., Label-free protein quantification of sodium butyrate treated CHO cells by ESI-UHR-TOF-MS. Journal of Biotechnology 257 (). , 2017 -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916543Proteomics of FACS-sorted heterogeneous Corynebacterium glutamicum populationsPUB | DOI | WoS | PubMed | Europe PMC
Harst, Andreas, Proteomics of FACS-sorted heterogeneous Corynebacterium glutamicum populations. Journal of Proteomics 160 (). , 2017 -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907705
Omics Fusion - A Platform for Integrative Analysis of Omics DataPUB | PDF | DOI | WoS | PubMed | Europe PMC
Brink, Benedikt, Omics Fusion - A Platform for Integrative Analysis of Omics Data. Journal of Integrative Bioinformatics 13 (4: SI). , 2016 -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907676
Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T)PUB | PDF | DOI | WoS | PubMed | Europe PMC
Jaenicke, Sebastian, Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T). Genome Announcements 4 (6). , 2016 -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plantPUB | DOI | WoS | PubMed | Europe PMC
Ortseifen, Vera, An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant. Journal of Biotechnology 231 (). , 2016 -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma GangrenosumPUB | DOI | WoS | PubMed | Europe PMC
Arnold, Martin, Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum. Genome announcements 3 (4). , 2015 -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722138
Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platformPUB | PDF | DOI | WoS | PubMed | Europe PMC
Kessler, Nikolas, Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform. Frontiers in Bioinformatics and Computational Biology 3 (). , 2015 -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901297
Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 IsolatesPUB | PDF | DOI | WoS | PubMed | Europe PMC
Wibberg, Daniel, Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates. Plos One 10 (12). , 2015 -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 27187672D-DIGE screening of high-productive CHO cells under glucose limitation — Basic changes in the proteome equipment and hints for epigenetic effectsPUB | DOI | WoS | PubMed | Europe PMC
Wingens, Marc, 2D-DIGE screening of high-productive CHO cells under glucose limitation — Basic changes in the proteome equipment and hints for epigenetic effects. Journal of Biotechnology 201 (). , 2015 -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758122Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951)PUB | DOI | WoS | PubMed | Europe PMC
Wibberg, Daniel, Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951). Journal of Biotechnology 204 (). , 2015 -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656819Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cellsPUB | DOI | WoS | PubMed | Europe PMC
Wippermann, Anna, Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cells. Applied Microbiology and Biotechnology 98 (2). , 2014 -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689773GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop SequencersPUB | DOI | WoS | PubMed | Europe PMC
Jünemann, Sebastian, GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers. PLOS ONE 9 (9). , 2014 -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029
ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio AnalysisPUB | PDF | DOI | WoS | PubMed | Europe PMC
Kessler, Nikolas, ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis. PLoS ONE 9 (11). , 2014 -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)PUB | DOI | WoS | PubMed | Europe PMC
Becker, Jennifer, Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.). Journal of biotechnology 178 (). , 2014 -
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2561776Proteome turnover in bacteria: current status for Corynebacterium glutamicum and related bacteriaPUB | DOI | WoS | PubMed | Europe PMC
Trötschel, Christian, Proteome turnover in bacteria: current status for Corynebacterium glutamicum and related bacteria. Microbial biotechnology 6 (6). , 2013 -
2012 | Bielefelder E-Dissertation | PUB-ID: 2547531
QuPE - An integrated bioinformatics platform for quantitative proteomicsPUB | PDF
Albaum, Stefan, QuPE - An integrated bioinformatics platform for quantitative proteomics. (). Bielefeld, 2012 -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232Protein turnover quantification in a multi-labeling approach - from data calculation to evaluationPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Trötschel, C, Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation. Molecular & Cellular Proteomics 11 (8). , 2012 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300063
A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application studyPUB | PDF | DOI | WoS | PubMed | Europe PMC
Albaum, Stefan, A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study. Proteome Science 9 (1). , 2011 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2451800
Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtiiPUB | PDF | DOI | WoS | PubMed | Europe PMC
Toepel, Jörg, Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii. BMC Genomics 12 (1). , 2011 -
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783813
Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an examplePUB | PDF | DOI | PubMed | Europe PMC
Neuweger, Heiko, Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example. BMC Systems Biology 3 (1). , 2009 -
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783187
EDGAR: a software framework for the comparative analysis of prokaryotic genomesPUB | PDF | DOI | WoS | PubMed | Europe PMC
Blom, Jochen, EDGAR: a software framework for the comparative analysis of prokaryotic genomes. BMC Bioinformatics 10 (1). , 2009 -
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321
EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray dataPUB | PDF | DOI | WoS | PubMed | Europe PMC
Dondrup, Michael, EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data. BMC Bioinformatics 10 (1). , 2009 -
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experimentsPUB | DOI | WoS | PubMed | Europe PMC
Albaum, Stefan, Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments. Bioinformatics 25 (23). , 2009 -
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636699MeltDB: a software platform for the analysis and integration of metabolomics experiment dataPUB | DOI | WoS | PubMed | Europe PMC
Neuweger, Heiko, MeltDB: a software platform for the analysis and integration of metabolomics experiment data. Bioinformatics 24 (23). , 2008 -
2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract)PUB
Albaum, Stefan, ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract). HUPO 7th Annual World Congress (). , 2008 -
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783754
CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome dataPUB | PDF | DOI | WoS | PubMed | Europe PMC
Neuweger, Heiko, CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data. BMC Systems Biology 1 (1). , 2007 -
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773302
BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparisonPUB | PDF | DOI | WoS | PubMed | Europe PMC
Bartels, Daniela, BACCardI - a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison. Bioinformatics 21 (7). , 2005