37 Publikationen
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2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2990926
Revealing the Arabidopsis AtGRP7 mRNA binding proteome by specific enhanced RNA interactome capturePUB | PDF | DOI | WoS | PubMed | Europe PMC
Reichel M, Schmidt O, Rettel M, Stein F, Köster T, Butter F, Staiger D (2024)
BMC Plant Biology 24(1): 552. -
2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985598
Arabidopsis thaliana GLYCINE RICH RNA-BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillationPUB | PDF | DOI | WoS | PubMed | Europe PMC
Lewinski M, Steffen A, Kachariya N, Elgner M, Schmal C, Messini N, Köster T, Reichel M, Sattler M, Zarnack K, Staiger D (2024)
Plant Journal 118(1): 22. -
2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2988228Arginine methylation of SM-LIKE PROTEIN 4 antagonistically affects alternative splicing during Arabidopsis stress responsesPUB | DOI | WoS | PubMed | Europe PMC
Agrofoglio YC, Iglesias MJ, Perez-Santangelo S, de Leone MJ, Köster T, Catala R, Salinas J, Yanovsky M, Staiger D, Mateos J (2024)
Plant Cell: koae051. -
2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2986985Mapping protein-RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2)PUB | DOI | WoS | PubMed | Europe PMC
Lewinski M, Brüggemann M, Köster T, Reichel M, Bergelt T, Meyer K, König J, Zarnack K, Staiger D (2024)
Nature Protocols. -
2023 | Preprint | Veröffentlicht | PUB-ID: 2987856Antagonistic effects of arginine methylation of LSM4 on alternative splicing during plant stress responsesPUB | DOI | Preprint
Agrofoglio YC, Iglesias MJ, Perez-Santángelo S, José de Leone M, Köster T, Catalá R, Salinas J, Yanovsky MJ, Staiger D, Mateos JL (2023)
bioRxiv. -
2023 | Preprint | Veröffentlicht | PUB-ID: 2987855An Arabidopsis SR protein relieving ABA inhibition of seedling establishment represses ABA-responsive alternative splicingPUB | DOI | Preprint
Laloum T, Martín G, Lewinski M, Yanez RJR, Köster T, Staiger D, Duque P (2023)
bioRxiv. -
2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2978193Plant iCLIP — auf Spurensuche im Transkriptom der PflanzePUB | DOI
Köster T, Sitte A (2023)
BIOspektrum 29(2): 174-176. -
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965202
Identification of Pri-miRNA Stem-Loop Interacting Proteins in Plants Using a Modified Version of the Csy4 CRISPR EndonucleasePUB | PDF | DOI | WoS | PubMed | Europe PMC
Lüders J, Winkel A, Reichel M, Bitterer V, Scheibe M, Widmann C, Butter F, Köster T (2022)
International Journal of Molecular Sciences 23(16): 8961. -
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964517A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysisPUB | DOI | WoS | PubMed | Europe PMC
Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, et al. (2022)
Genome biology 23(1): 149. -
2021 | Preprint | Veröffentlicht | PUB-ID: 2954082Principles of mRNA targeting and regulation via the Arabidopsis m6A-binding proteins ECT2 and ECT3PUB | DOI | Preprint
Arribas-Hernandez L, Rennie S, Köster T, Schon M, Porcelli C, Lewinski M, Enugutti B, Nodine MD, Staiger D, Andersson R, Brodersen P (2021)
bioRxiv. -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959415Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2PUB | DOI | WoS | PubMed | Europe PMC
Arribas-Hernández L, Rennie S, Köster T, Porcelli C, Lewinski M, Staiger D, Andersson R, Brodersen P (2021)
eLife 10: e72375. -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952670CLIP and complementary methodsPUB | DOI | WoS
Hafner M, Katsantoni M, Köster T, Marks J, Mukherjee J, Staiger D, Ule J, Zavolan M (2021)
Nature Reviews Methods Primers 1(1): 20. -
2021 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2948744RNA-Binding Protein Immunoprecipitation and High-Throughput SequencingPUB | DOI | PubMed | Europe PMC
Köster T, Staiger D (2021)
In: Arabidopsis Protocols . Sanchez-Serrano JJ, Salinas J (Eds); Methods in molecular biology , 2200. New York: Humana: 453-461. -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942001
SEQing: web-based visualization of iCLIP and RNA-seq data in an interactive python framework.PUB | PDF | DOI | WoS | PubMed | Europe PMC
Lewinski M, Bramkamp Y, Köster T, Staiger D (2020)
BMC bioinformatics 21(1): 113. -
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945219Plant Individual Nucleotide Resolution Cross-Linking and Immunoprecipitation to Characterize RNA-Protein Complexes.PUB | DOI | PubMed | Europe PMC
Köster T, Staiger D (2020)
Methods in molecular biology (Clifton, N.J.) 2166: 255-267. -
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937585CLIP and RNA interactome studies to unravel genome-wide RNA-protein interactions in vivo in Arabidopsis thaliana.PUB | DOI | WoS | PubMed | Europe PMC
Köster T, Reichel M, Staiger D (2019)
Methods (San Diego, Calif.). -
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936720Marking RNA: m6A writers, readers and functions in ArabidopsisPUB | DOI | WoS | PubMed | Europe PMC
Reichel M, Köster T, Staiger D (2019)
Journal of molecular cell biology 11(10): 899-910. -
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2934855Systems Approaches to Map In Vivo RNA–Protein Interactions in Arabidopsis thalianaPUB | DOI
Lewinski M, Köster T (2018)
In: Systems Biology. Rajewsky N, Jurga S, Barciszewski J (Eds); RNA Technologies. Cham: Springer International Publishing: 77-95. -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919118On the move through time - a historical review of plant clock researchPUB | DOI | WoS | PubMed | Europe PMC
Johansson M, Köster T (2018)
Plant Biology 21(S1): 13-20. -
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918314Plant Ribonomics: Proteins in Search of RNA PartnersPUB | DOI | WoS | PubMed | Europe PMC
Köster T, Meyer K (2018)
Trends in Plant Science 23(4): 352-365. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914954
Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7PUB | PDF | DOI | WoS | PubMed | Europe PMC
Meyer K, Köster T, Nolte C, Weinholdt C, Lewinski M, Grosse I, Staiger D (2017)
Genome Biology 18(1): 204. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914953Volkszählung in der Zelle - wer bindet RNA?PUB | DOI
Köster T (2017)
Biologie in unserer Zeit 47(4): 226-227. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911046A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell FatePUB | DOI | WoS | PubMed | Europe PMC
Foley SW, Gosai SJ, Wang D, Selamoglu N, Sollitti AC, Köster T, Steffen A, Lyons E, Daldal F, Garcia BA, Staiger D, et al. (2017)
Developmental Cell 41(2): 204-220.e5. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911065RNA-Binding Proteins Revisited – The Emerging Arabidopsis mRNA InteractomePUB | DOI | WoS | PubMed | Europe PMC
Köster T, Marondedze C, Meyer K, Staiger D (2017)
Trends in Plant Science 22(6): 512-526. -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764695
Pre-mRNA Splicing in Plants: In Vivo Functions of RNA-Binding Proteins Implicated in the Splicing ProcessPUB | PDF | DOI | WoS | PubMed | Europe PMC
Meyer K, Köster T, Staiger D (2015)
Biomolecules 5(3): 1717-1740. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629103RNA-Binding Protein Immunoprecipitation from Whole-Cell ExtractsPUB | DOI | PubMed | Europe PMC
Köster T, Staiger D (2014)
Methods in molecular biology (Clifton, N.J.) 1062: 679-695. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631517Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunityPUB | DOI | WoS | PubMed | Europe PMC
Hackmann C, Korneli C, Kutyniok M, Köster T, Wiedenlübbert M, Müller C, Staiger D (2014)
Plant, Cell & Environment 37(3): 696-706. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709993Unraveling post-transcriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitationPUB | DOI
Meyer K, Köster T, Staiger D (2014)
Biotechnologia. Journal of Biotechnology, Computational Biology and Bionanotechnology 95(1): 43. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676604The RIPper Case: Identification of RNA-Binding Protein Targets by RNA ImmunoprecipitationPUB | DOI | PubMed | Europe PMC
Köster T, Haas M, Staiger D (2014)
Methods in molecular biology (Clifton, N.J.) 1158: 107-121. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694724Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in ArabidopsisPUB | DOI | WoS | PubMed | Europe PMC
Köster T, Meyer K, Weinholdt C, Smith LM, Lummer M, Speth C, Grosse I, Weigel D, Staiger D (2014)
Nucleic acids research 42(15): 9925-9936. -
2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2709933Unraveling post-tramscriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitationPUB
Meyer K, Köster T, Staiger D (2014)
BioTechnologia 95(1): 43-43. -
2014 | Dissertation | PUB-ID: 2717324Funktion von Ribonukleoproteinkomplexen in der posttranskriptionellen Regulation und microRNA-BiogenesePUB
Köster T (2014)
Bielefeld. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709991Jenseits des Genoms – Alternatives Spleißen erhöht die Vielfalt des TranskriptomsPUB
Köster T, Brown JWS, Staiger D (2014)
Naturwissenschaftliche Rundschau 67(11): 566-571. -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548847An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thalianaPUB | DOI | WoS | PubMed | Europe PMC
Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JWS, Staiger D (2012)
Nucleic acids research 40(22): 11240-11255. -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003474Spotlight on post-transcriptional control in the circadian systemPUB | DOI | WoS | PubMed | Europe PMC
Staiger D, Köster T (2011)
Cellular and Molecular Life Sciences 68(1): 71-83. -
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2438856
Timing is everything - Die Innere Uhr der PflanzenPUB | PDF | Download (ext.)
Staiger D, Köster T (2009)
Labor & More 5: 40-41.