36 Publikationen
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2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2988228Agrofoglio, Y. C.; Iglesias, M. J.; Perez-Santangelo, S.; de Leone, M. J.; Köster, T.; Catala, R.; Salinas, J.; Yanovsky, M.; Staiger, D.; Mateos, J. (2024): Arginine methylation of SM-LIKE PROTEIN 4 antagonistically affects alternative splicing during Arabidopsis stress responses Plant Cell,koae051PUB | DOI | WoS | PubMed | Europe PMC
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2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2986985Lewinski, M.; Brüggemann, M.; Köster, T.; Reichel, M.; Bergelt, T.; Meyer, K.; König, J.; Zarnack, K.; Staiger, D. (2024): Mapping protein-RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2) Nature ProtocolsPUB | DOI | WoS | PubMed | Europe PMC
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2023 | Preprint | Veröffentlicht | PUB-ID: 2987856Agrofoglio, Y. C.; Iglesias, M. J.; Perez-Santángelo, S.; José de Leone, M.; Köster, T.; Catalá, R.; Salinas, J.; Yanovsky, M. J.; Staiger, D.; Mateos, J. L. (2023): Antagonistic effects of arginine methylation of LSM4 on alternative splicing during plant stress responses bioRxivPUB | DOI | Preprint
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2023 | Preprint | Veröffentlicht | PUB-ID: 2987855Laloum, T.; Martín, G.; Lewinski, M.; Yanez, R. J. R.; Köster, T.; Staiger, D.; Duque, P. (2023): An Arabidopsis SR protein relieving ABA inhibition of seedling establishment represses ABA-responsive alternative splicing bioRxivPUB | DOI | Preprint
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2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2985598Lewinski, M.; Steffen, A.; Kachariya, N.; Elgner, M.; Schmal, C.; Messini, N.; Köster, T.; Reichel, M.; Sattler, M.; Zarnack, K.; Staiger, D. (2023): Arabidopsis thaliana GLYCINE RICH RNA-BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillation Plant JournalPUB | PDF | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965202Lüders, J.; Winkel, A.; Reichel, M.; Bitterer, V.; Scheibe, M.; Widmann, C.; Butter, F.; Köster, T. (2022): Identification of Pri-miRNA Stem-Loop Interacting Proteins in Plants Using a Modified Version of the Csy4 CRISPR Endonuclease International Journal of Molecular Sciences,23:(16):8961PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964517Zhang, R.; Kuo, R.; Coulter, M.; Calixto, C. P. G.; Entizne, J. C.; Guo, W.; Marquez, Y.; Milne, L.; Riegler, S.; Matsui, A.; Tanaka, M.; Harvey, S.; Gao, Y.; WieSSner-Kroh, T.; Paniagua, A.; Crespi, M.; Denby, K.; Hur, A. B.; Huq, E.; Jantsch, M.; Jarmolowski, A.; Köster, T.; Laubinger, S.; Li, Q. Q.; Gu, L.; Seki, M.; Staiger, D.; Sunkar, R.; Szweykowska-Kulinska, Z.; Tu, S. - L.; Wachter, A.; Waugh, R.; Xiong, L.; Zhang, X. - N.; Conesa, A.; Reddy, A. S. N.; Barta, A.; Kalyna, M.; Brown, J. W. S. (2022): A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis Genome biology,23:(1):149PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Preprint | Veröffentlicht | PUB-ID: 2954082Arribas-Hernandez, L.; Rennie, S.; Köster, T.; Schon, M.; Porcelli, C.; Lewinski, M.; Enugutti, B.; Nodine, M. D.; Staiger, D.; Andersson, R.; Brodersen, P. (2021): Principles of mRNA targeting and regulation via the Arabidopsis m6A-binding proteins ECT2 and ECT3 bioRxivPUB | DOI | Preprint
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959415Arribas-Hernández, L.; Rennie, S.; Köster, T.; Porcelli, C.; Lewinski, M.; Staiger, D.; Andersson, R.; Brodersen, P. (2021): Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2 eLife,10:e72375PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2948744Köster, T.; Staiger, D. (2021): RNA-Binding Protein Immunoprecipitation and High-Throughput Sequencing. In: José J. Sanchez-Serrano; Julio Salinas (Hrsg.): Arabidopsis Protocols . New York: Humana. (Methods in molecular biology , 2200). S. 453-461.PUB | DOI | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945219Köster, T.; Staiger, D. (2020): Plant Individual Nucleotide Resolution Cross-Linking and Immunoprecipitation to Characterize RNA-Protein Complexes. Methods in molecular biology (Clifton, N.J.),2166: 255-267.PUB | DOI | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937585Köster, T.; Reichel, M.; Staiger, D. (2019): CLIP and RNA interactome studies to unravel genome-wide RNA-protein interactions in vivo in Arabidopsis thaliana. Methods (San Diego, Calif.)PUB | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936720Reichel, M.; Köster, T.; Staiger, D. (2019): Marking RNA: m6A writers, readers and functions in Arabidopsis Journal of molecular cell biology,11:(10): 899-910.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2934855Lewinski, M.; Köster, T. (2018): Systems Approaches to Map In Vivo RNA–Protein Interactions in Arabidopsis thaliana. In: Nikolaus Rajewsky; Stefan Jurga; Jan Barciszewski (Hrsg.): Systems Biology. Cham: Springer International Publishing. (RNA Technologies, ). S. 77-95.PUB | DOI
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919118Johansson, M.; Köster, T. (2018): On the move through time - a historical review of plant clock research Plant Biology,21:(S1): 13-20.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918314Köster, T.; Meyer, K. (2018): Plant Ribonomics: Proteins in Search of RNA Partners Trends in Plant Science,23:(4): 352-365.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914954Meyer, K.; Köster, T.; Nolte, C.; Weinholdt, C.; Lewinski, M.; Grosse, I.; Staiger, D. (2017): Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7 Genome Biology,18:(1):204PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911065Köster, T.; Marondedze, C.; Meyer, K.; Staiger, D. (2017): RNA-Binding Proteins Revisited – The Emerging Arabidopsis mRNA Interactome Trends in Plant Science,22:(6): 512-526.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911046Foley, S. W.; Gosai, S. J.; Wang, D.; Selamoglu, N.; Sollitti, A. C.; Köster, T.; Steffen, A.; Lyons, E.; Daldal, F.; Garcia, B. A.; Staiger, D.; Deal, R. B.; Gregory, B. D. (2017): A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate Developmental Cell,41:(2): 204-220.e5.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629103Köster, T.; Staiger, D. (2014): RNA-Binding Protein Immunoprecipitation from Whole-Cell Extracts Methods in molecular biology (Clifton, N.J.),1062: 679-695.PUB | DOI | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631517Hackmann, C.; Korneli, C.; Kutyniok, M.; Köster, T.; Wiedenlübbert, M.; Müller, C.; Staiger, D. (2014): Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity Plant, Cell & Environment,37:(3): 696-706.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709993Meyer, K.; Köster, T.; Staiger, D. (2014): Unraveling post-transcriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation Biotechnologia. Journal of Biotechnology, Computational Biology and Bionanotechnology,95:(1): 43.PUB | DOI
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694724Köster, T.; Meyer, K.; Weinholdt, C.; Smith, L. M.; Lummer, M.; Speth, C.; Grosse, I.; Weigel, D.; Staiger, D. (2014): Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis Nucleic acids research,42:(15): 9925-9936.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676604Köster, T.; Haas, M.; Staiger, D. (2014): The RIPper Case: Identification of RNA-Binding Protein Targets by RNA Immunoprecipitation Methods in molecular biology (Clifton, N.J.),1158: 107-121.PUB | DOI | PubMed | Europe PMC
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2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2709933Meyer, K.; Köster, T.; Staiger, D. (2014): Unraveling post-tramscriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation BioTechnologia,95:(1): 43-43.PUB
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2014 | Dissertation | PUB-ID: 2717324Köster, T. (2014): Funktion von Ribonukleoproteinkomplexen in der posttranskriptionellen Regulation und microRNA-Biogenese. Bielefeld.PUB
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709991Köster, T.; Brown, J. W. S.; Staiger, D. (2014): Jenseits des Genoms – Alternatives Spleißen erhöht die Vielfalt des Transkriptoms Naturwissenschaftliche Rundschau,67:(11): 566-571.PUB
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548847Streitner, C.; Köster, T.; Simpson, C. G.; Shaw, P.; Danisman, S.; Brown, J. W. S.; Staiger, D. (2012): An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana Nucleic acids research,40:(22): 11240-11255.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003474Staiger, D.; Köster, T. (2011): Spotlight on post-transcriptional control in the circadian system Cellular and Molecular Life Sciences,68:(1): 71-83.PUB | DOI | WoS | PubMed | Europe PMC
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2438856Staiger, D.; Köster, T. (2009): Timing is everything - Die Innere Uhr der Pflanzen Labor & More,5: 40-41.PUB | PDF | Download (ext.)