36 Publikationen
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2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2988228Agrofoglio YC, Iglesias MJ, Perez-Santangelo S, de Leone MJ, Köster T, Catala R, Salinas J, Yanovsky M, Staiger D, Mateos J (2024)PUB | DOI | WoS | PubMed | Europe PMC
Arginine methylation of SM-LIKE PROTEIN 4 antagonistically affects alternative splicing during Arabidopsis stress responses.
Plant Cell: koae051. -
2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2986985Lewinski M, Brüggemann M, Köster T, Reichel M, Bergelt T, Meyer K, König J, Zarnack K, Staiger D (2024)PUB | DOI | WoS | PubMed | Europe PMC
Mapping protein-RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2).
Nature Protocols. -
2023 | Preprint | Veröffentlicht | PUB-ID: 2987856Agrofoglio YC, Iglesias MJ, Perez-Santángelo S, José de Leone M, Köster T, Catalá R, Salinas J, Yanovsky MJ, Staiger D, Mateos JL (2023)PUB | DOI | Preprint
Antagonistic effects of arginine methylation of LSM4 on alternative splicing during plant stress responses.
bioRxiv. -
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2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2985598Lewinski M, Steffen A, Kachariya N, Elgner M, Schmal C, Messini N, Köster T, Reichel M, Sattler M, Zarnack K, Staiger D (2023)PUB | PDF | DOI | WoS | PubMed | Europe PMC
Arabidopsis thaliana GLYCINE RICH RNA-BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillation.
Plant Journal. -
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965202Lüders J, Winkel A, Reichel M, Bitterer V, Scheibe M, Widmann C, Butter F, Köster T (2022)PUB | PDF | DOI | WoS | PubMed | Europe PMC
Identification of Pri-miRNA Stem-Loop Interacting Proteins in Plants Using a Modified Version of the Csy4 CRISPR Endonuclease.
International Journal of Molecular Sciences 23(16): 8961. -
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964517Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, Harvey S, Gao Y, WieSSner-Kroh T, Paniagua A, Crespi M, Denby K, Hur AB, Huq E, Jantsch M, Jarmolowski A, Köster T, Laubinger S, Li QQ, Gu L, Seki M, Staiger D, Sunkar R, Szweykowska-Kulinska Z, Tu S-L, Wachter A, Waugh R, Xiong L, Zhang X-N, Conesa A, Reddy ASN, Barta A, Kalyna M, Brown JWS (2022)PUB | DOI | WoS | PubMed | Europe PMC
A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis.
Genome biology 23(1): 149. -
2021 | Preprint | Veröffentlicht | PUB-ID: 2954082Arribas-Hernandez L, Rennie S, Köster T, Schon M, Porcelli C, Lewinski M, Enugutti B, Nodine MD, Staiger D, Andersson R, Brodersen P (2021)PUB | DOI | Preprint
Principles of mRNA targeting and regulation via the Arabidopsis m6A-binding proteins ECT2 and ECT3.
bioRxiv. -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959415Arribas-Hernández L, Rennie S, Köster T, Porcelli C, Lewinski M, Staiger D, Andersson R, Brodersen P (2021)PUB | DOI | WoS | PubMed | Europe PMC
Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2.
eLife 10: e72375. -
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2021 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2948744Köster T, Staiger D (2021)PUB | DOI | PubMed | Europe PMC
RNA-Binding Protein Immunoprecipitation and High-Throughput Sequencing.
In: Arabidopsis Protocols . Sanchez-Serrano JJ, Salinas J (Eds); Methods in molecular biology , 2200. New York: Humana: 453-461. -
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945219Köster T, Staiger D (2020)PUB | DOI | PubMed | Europe PMC
Plant Individual Nucleotide Resolution Cross-Linking and Immunoprecipitation to Characterize RNA-Protein Complexes.
Methods in molecular biology (Clifton, N.J.) 2166: 255-267. -
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937585Köster T, Reichel M, Staiger D (2019)PUB | DOI | WoS | PubMed | Europe PMC
CLIP and RNA interactome studies to unravel genome-wide RNA-protein interactions in vivo in Arabidopsis thaliana.
Methods (San Diego, Calif.). -
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936720Reichel M, Köster T, Staiger D (2019)PUB | DOI | WoS | PubMed | Europe PMC
Marking RNA: m6A writers, readers and functions in Arabidopsis.
Journal of molecular cell biology 11(10): 899-910. -
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2934855Lewinski M, Köster T (2018)PUB | DOI
Systems Approaches to Map In Vivo RNA–Protein Interactions in Arabidopsis thaliana.
In: Systems Biology. Rajewsky N, Jurga S, Barciszewski J (Eds); RNA Technologies, Cham: Springer International Publishing: 77-95. -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919118Johansson M, Köster T (2018)PUB | DOI | WoS | PubMed | Europe PMC
On the move through time - a historical review of plant clock research.
Plant Biology 21(S1): 13-20. -
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918314Köster T, Meyer K (2018)PUB | DOI | WoS | PubMed | Europe PMC
Plant Ribonomics: Proteins in Search of RNA Partners.
Trends in Plant Science 23(4): 352-365. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914954Meyer K, Köster T, Nolte C, Weinholdt C, Lewinski M, Grosse I, Staiger D (2017)PUB | PDF | DOI | WoS | PubMed | Europe PMC
Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7.
Genome Biology 18(1): 204. -
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911065Köster T, Marondedze C, Meyer K, Staiger D (2017)PUB | DOI | WoS | PubMed | Europe PMC
RNA-Binding Proteins Revisited – The Emerging Arabidopsis mRNA Interactome.
Trends in Plant Science 22(6): 512-526. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911046Foley SW, Gosai SJ, Wang D, Selamoglu N, Sollitti AC, Köster T, Steffen A, Lyons E, Daldal F, Garcia BA, Staiger D, Deal RB, Gregory BD (2017)PUB | DOI | WoS | PubMed | Europe PMC
A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate.
Developmental Cell 41(2): 204-220.e5. -
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629103Köster T, Staiger D (2014)PUB | DOI | PubMed | Europe PMC
RNA-Binding Protein Immunoprecipitation from Whole-Cell Extracts.
Methods in molecular biology (Clifton, N.J.) 1062: 679-695. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631517Hackmann C, Korneli C, Kutyniok M, Köster T, Wiedenlübbert M, Müller C, Staiger D (2014)PUB | DOI | WoS | PubMed | Europe PMC
Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity.
Plant, Cell & Environment 37(3): 696-706. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709993Meyer K, Köster T, Staiger D (2014)PUB | DOI
Unraveling post-transcriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation.
Biotechnologia. Journal of Biotechnology, Computational Biology and Bionanotechnology 95(1): 43. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694724Köster T, Meyer K, Weinholdt C, Smith LM, Lummer M, Speth C, Grosse I, Weigel D, Staiger D (2014)PUB | DOI | WoS | PubMed | Europe PMC
Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis.
Nucleic acids research 42(15): 9925-9936. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676604Köster T, Haas M, Staiger D (2014)PUB | DOI | PubMed | Europe PMC
The RIPper Case: Identification of RNA-Binding Protein Targets by RNA Immunoprecipitation.
Methods in molecular biology (Clifton, N.J.) 1158: 107-121. -
2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2709933Meyer K, Köster T, Staiger D (2014)PUB
Unraveling post-tramscriptional networks: Analysis of RNA-protein interactions with RNA immunoprecipitation.
BioTechnologia 95(1): 43-43. -
2014 | Dissertation | PUB-ID: 2717324Köster T (2014)PUB
Funktion von Ribonukleoproteinkomplexen in der posttranskriptionellen Regulation und microRNA-Biogenese.
Bielefeld. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709991Köster T, Brown JWS, Staiger D (2014)PUB
Jenseits des Genoms – Alternatives Spleißen erhöht die Vielfalt des Transkriptoms.
Naturwissenschaftliche Rundschau 67(11): 566-571. -
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548847Streitner C, Köster T, Simpson CG, Shaw P, Danisman S, Brown JWS, Staiger D (2012)PUB | DOI | WoS | PubMed | Europe PMC
An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana.
Nucleic acids research 40(22): 11240-11255. -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003474Staiger D, Köster T (2011)PUB | DOI | WoS | PubMed | Europe PMC
Spotlight on post-transcriptional control in the circadian system.
Cellular and Molecular Life Sciences 68(1): 71-83. -
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2438856Staiger D, Köster T (2009)PUB | PDF | Download (ext.)
Timing is everything - Die Innere Uhr der Pflanzen.
Labor & More 5: 40-41.