26 Publikationen
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934274Assessing taxonomic metagenome profilers with OPALPUB | DOI | WoS | PubMed | Europe PMC | Preprint
Meyer, Fernando, Assessing taxonomic metagenome profilers with OPAL. Genome biology 20 (1). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941280Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and ArchaeaPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Zhu, Qiyun, Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea. Nature Communications 10 (1). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941281The impact of skin care products on skin chemistry and microbiome dynamicsPUB | DOI | WoS | PubMed | Europe PMC
Bouslimani, Amina, The impact of skin care products on skin chemistry and microbiome dynamics. BMC Biology 17 (1). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934328Environmental toxicants in breast milk of Norwegian mothers and gut bacteria composition and metabolites in their infants at 1 monthPUB | DOI | WoS | PubMed | Europe PMC
Iszatt, Nina, Environmental toxicants in breast milk of Norwegian mothers and gut bacteria composition and metabolites in their infants at 1 month. Microbiome 7 (1). , 2019 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921267American Gut: an Open Platform for Citizen Science Microbiome ResearchPUB | DOI | WoS | PubMed | Europe PMC
McDonald, Daniel, American Gut: an Open Platform for Citizen Science Microbiome Research. mSystems 3 (3). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921270KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass SamplesPUB | DOI | WoS | PubMed | Europe PMC
Minich, Jeremiah J., KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples. mSystems 3 (3). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921268Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical InformationPUB | DOI | WoS | PubMed | Europe PMC
Janssen, Stefan, Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information. mSystems 3 (3). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921273Creating a 3D microbial and chemical snapshot of a human habitatPUB | DOI | WoS | PubMed | Europe PMC
Kapono, Clifford A., Creating a 3D microbial and chemical snapshot of a human habitat. Scientific Reports 8 (1). , 2018 -
2018 | Preprint | Veröffentlicht | PUB-ID: 2931839QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data sciencePUB | DOI
Bolyen, Evan, QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science. PeerJ (). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931438Qiita: rapid, web-enabled microbiome meta-analysisPUB | DOI | WoS | PubMed | Europe PMC
Gonzalez, Antonio, Qiita: rapid, web-enabled microbiome meta-analysis. Nature Methods 15 (10). , 2018 -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914868A communal catalogue reveals Earth’s multiscale microbial diversityPUB | DOI | WoS | PubMed | Europe PMC
Thompson, Luke R., A communal catalogue reveals Earth’s multiscale microbial diversity. Nature 551 (7681). , 2017 -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics softwarePUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Sczyrba, Alexander, Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods 14 (11). , 2017 -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907305Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's DiseasePUB | DOI | WoS | PubMed | Europe PMC
Sampson, Timothy R, Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease. Cell 167 (6). , 2016 -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764888
Ambivalent covariance modelsPUB | PDF | DOI | WoS | PubMed | Europe PMC
Janssen, Stefan, Ambivalent covariance models. BMC Bioinformatics 16 (1). , 2015 -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2700599The RNA shapes studioPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Janssen, Stefan, The RNA shapes studio. Bioinformatics 31 (3). , 2014 -
2014 | Bielefelder E-Dissertation | PUB-ID: 2682131
Kisses, ambivalent models and more: Contributions to the analysis of RNA secondary structure.PUB | PDF
Janssen, Stefan, Kisses, ambivalent models and more: Contributions to the analysis of RNA secondary structure.. (). Bielefeld, 2014 -
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2551798Bellman's GAP -- a Language and Compiler for Dynamic Programming in Sequence AnalysisPUB | DOI | WoS | PubMed | Europe PMC
Sauthoff, Georg, Bellman's GAP -- a Language and Compiler for Dynamic Programming in Sequence Analysis. Bioinformatics 29 (5). , 2013 -
2012 | Sammelwerksbeitrag | PUB-ID: 2439665Abstract Shape Analysis of RNAPUB
Janssen, Stefan, Abstract Shape Analysis of RNA. RNA Bioinformatics t.b.a. (). , 2012 -
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410526
Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure predictionPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Janssen, Stefan, Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction. BMC Bioinformatics 12 (1). , 2011 -
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2310489Bellman's GAP: a declarative language for dynamic programmingPUB | DOI | Download (ext.)
Sauthoff, Georg, Bellman's GAP: a declarative language for dynamic programming. Proceedings of the 13th international ACM SIGPLAN symposium on Principles and practices of declarative programming (). New York, NY, USA, 2011 -
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785497
A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium melilotiPUB | PDF | DOI | WoS | PubMed | Europe PMC
Schlüter, Jan-Philip, A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti. BMC Genomics 11 (1). , 2010 -
2010 | Datenpublikation | PUB-ID: 2698354
Supplementary Material for "Browsing RNA Structures by Interactive Sonification"PUB | Dateien verfügbar | DOI
Grond, Florian, Supplementary Material for "Browsing RNA Structures by Interactive Sonification". (). , 2010 -
2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1893988
Browsing RNA Structures by Interactive SonificationPUB | Datei | Download (ext.)
Grond, Florian, Browsing RNA Structures by Interactive Sonification. Proceedings of the 3rd Interactive Sonification Workshop (Human Interaction with Auditory Displays). KTH, Stockholm, Sweden, 2010 -
2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1894008
Prediction of RNA Secondary Structure Including Kissing Hairpin MotifsPUB | Datei | DOI
Theis, Corinna, Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs. Algorithms in Bioinformatics. 10th international workshop (WABI 2010), proceedings 6293 (). Berlin, 2010 -
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893946
Faster computation of exact RNA shape probabilitiesPUB | Datei | DOI | WoS | PubMed | Europe PMC
Janssen, Stefan, Faster computation of exact RNA shape probabilities. Bioinformatics 26 (5). , 2010 -
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893917
Shape based indexing for faster search of RNA family databasesPUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
Janssen, Stefan, Shape based indexing for faster search of RNA family databases. BMC Bioinformatics 9 (1). , 2008