PUB - Publikationen an der Universität Bielefeld

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• [26]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934274

  Meyer, F., et al., 2019. Assessing taxonomic metagenome profilers with OPAL. Genome biology, 20(1): 51.

  PUB | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [25]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941280

  Zhu, Q., et al., 2019. Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea. Nature Communications, 10(1): 5477.

  PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [24]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941281

  Bouslimani, A., et al., 2019. The impact of skin care products on skin chemistry and microbiome dynamics. BMC Biology, 17(1): 47.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [23]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934328

  Iszatt, N., et al., 2019. Environmental toxicants in breast milk of Norwegian mothers and gut bacteria composition and metabolites in their infants at 1 month. Microbiome, 7(1): 34.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [22]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921267

  McDonald, D., et al., 2018. American Gut: an Open Platform for Citizen Science Microbiome Research. mSystems, 3(3), p e00031-18.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [21]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921270

  Minich, J.J., et al., 2018. KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples. mSystems, 3(3), p e00218-17.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [20]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921268

  Janssen, S., et al., 2018. Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information. mSystems, 3(3), p e00021-18.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [19]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921273

  Kapono, C.A., et al., 2018. Creating a 3D microbial and chemical snapshot of a human habitat. Scientific Reports, 8(1): 3669.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [18]
  

  2018 | Preprint | Veröffentlicht | PUB-ID: 2931839

  Bolyen, E., et al., 2018. QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science. PeerJ.

  PUB | DOI
   
• [17]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931438

  Gonzalez, A., et al., 2018. Qiita: rapid, web-enabled microbiome meta-analysis. Nature Methods, 15(10), p 796-798.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [16]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914868

  Thompson, L.R., et al., 2017. A communal catalogue reveals Earth’s multiscale microbial diversity. Nature, 551(7681), p 457-463.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367

  Sczyrba, A., et al., 2017. Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods, 14(11), p 1063-1071.

  PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [14]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907305

  Sampson, T.R., et al., 2016. Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease. Cell, 167(6), p 1469-1480.e12.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764888

  Janssen, S., & Giegerich, R., 2015. Ambivalent covariance models. BMC Bioinformatics, 16(1): 178.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [12]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2700599

  Janssen, S., & Giegerich, R., 2014. The RNA shapes studio. Bioinformatics, 31(3), p 423-425.

  PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [11]
  

  2014 | Bielefelder E-Dissertation | PUB-ID: 2682131

  Janssen, S., 2014. Kisses, ambivalent models and more: Contributions to the analysis of RNA secondary structure., Bielefeld: Universitätsbibliothek.

  PUB | PDF
   
• [10]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2551798

  Sauthoff, G., et al., 2013. Bellman's GAP -- a Language and Compiler for Dynamic Programming in Sequence Analysis. Bioinformatics, 29(5), p 551-560.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [9]
  

  2012 | Sammelwerksbeitrag | PUB-ID: 2439665

  Janssen, S., & Giegerich, R., 2012. Abstract Shape Analysis of RNA. In J. Gorodkin & Z. Weinberg, eds. RNA Bioinformatics t.b.a. pp. 1-35.

  PUB
   
• [8]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410526

  Janssen, S., et al., 2011. Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction. BMC Bioinformatics, 12(1): 429.

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [7]
  

  2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2310489

  Sauthoff, G., Janssen, S., & Giegerich, R., 2011. Bellman's GAP: a declarative language for dynamic programming. In Proceedings of the 13th international ACM SIGPLAN symposium on Principles and practices of declarative programming. New York, NY, USA: ACM, pp. 29-40.

  PUB | DOI | Download (ext.)
   
• [6]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785497

  Schlüter, J.-P., et al., 2010. A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti. BMC Genomics, 11(1): 245.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [5]
  

  2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1893988

  Grond, F., et al., 2010. Browsing RNA Structures by Interactive Sonification. In R. Bresin, T. Hermann, & A. Hunt, eds. Proceedings of the 3rd Interactive Sonification Workshop. KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC), pp. 11-16.

  PUB | Datei | Download (ext.)
   
• [4]
  

  2010 | Datenpublikation | PUB-ID: 2698354

  Grond, F., et al., 2010. Supplementary Material for "Browsing RNA Structures by Interactive Sonification", Bielefeld University.

  PUB | Dateien verfügbar | DOI
   
• [3]
  

  2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1894008

  Theis, C., Janssen, S., & Giegerich, R., 2010. Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs. In V. Moulton & M. Singh, eds. Algorithms in Bioinformatics. 10th international workshop (WABI 2010), proceedings. Lecture Notes in Bioinformatics. no.6293 Berlin: Springer, pp. 52-64.

  PUB | Datei | DOI
   
• [2]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893946

  Janssen, S., & Giegerich, R., 2010. Faster computation of exact RNA shape probabilities. Bioinformatics, 26(5), p 632-639.

  PUB | Datei | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893917

  Janssen, S., Reeder, J., & Giegerich, R., 2008. Shape based indexing for faster search of RNA family databases. BMC Bioinformatics, 9(1), p 131.

  PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC