17 Publikationen

Alle markieren

[17]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A. Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microbial Biotechnology. 2018;11(4):667-679.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037
Verwaaijen B, Wibberg D, Nelkner J, et al. Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome. JOURNAL OF BIOTECHNOLOGY. 2018;267:12-18.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516
Maus I, Bremges A, Stolze Y, et al. Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes. Biotechnology for Biofuels. 2017;10(1): 264.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[14]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
Sczyrba A, Hofmann P, Belmann P, et al. Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods. 2017;14(11):1063-1071.
PUB | DOI | WoS | PubMed | Europe PMC
 
[13]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze Y, Bremges A, Rumming M, et al. Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels. 2016;9: 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2016 | Bielefelder E-Dissertation | PUB-ID: 2906743
Bremges A. Assembling the microbial dark matter. Bielefeld: Universität Bielefeld; 2016.
PUB | PDF
 
[11]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Maus I, Cibis KG, Bremges A, et al. Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology. 2016;232:50-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Wibberg D, Bremges A, Dammann-Kalinowski T, et al. Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology. 2016;232:61-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
Bremges A, Singer E, Woyke T, Sczyrba A. MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics. 2016;32(14):2199-2201.
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
Maus I, Koeck DE, Cibis KG, et al. Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates. Biotechnology for Biofuels. 2016;9(1): 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
Ortseifen V, Stolze Y, Maus I, et al. An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant. Journal of Biotechnology. 2016;231:268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906
Bremges A, Maus I, Belmann P, et al. Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant. GigaScience. 2015;4(1): 33.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[5]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
Kohrs F, Wolter S, Benndorf D, et al. Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities. Proteomics. 2015;15(20):3585-3589.
PUB | DOI | WoS | PubMed | Europe PMC
 
[4]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501
Belmann P, Dröge J, Bremges A, McHardy AC, Sczyrba A, Barton MD. Bioboxes: standardised containers for interchangeable bioinformatics software. GigaScience. 2015;4: 47.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
Wibberg D, Luque-Almagro VM, Igeño MI, et al. Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Journal of biotechnology. 2014;175:67-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[2]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645192
Gillett A, Bergman P, Parsa R, Bremges A, Giegerich R, Jagodic M. A Silent Exonic SNP in Kdm3a Affects Nucleic Acids Structure but Does Not Regulate Experimental Autoimmune Encephalomyelitis. Plos One. 2013;8(12):e81912.
PUB | DOI | WoS | PubMed | Europe PMC
 
[1]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906810
Bremges A, Schirmer S, Giegerich R. Fine-tuning structural RNA alignments in the twilight zone. BMC Bioinformatics. 2010;11(1): 222.
PUB | DOI | WoS | PubMed | Europe PMC
 

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17 Publikationen

Alle markieren

[17]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A. Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microbial Biotechnology. 2018;11(4):667-679.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037
Verwaaijen B, Wibberg D, Nelkner J, et al. Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome. JOURNAL OF BIOTECHNOLOGY. 2018;267:12-18.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516
Maus I, Bremges A, Stolze Y, et al. Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes. Biotechnology for Biofuels. 2017;10(1): 264.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[14]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
Sczyrba A, Hofmann P, Belmann P, et al. Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods. 2017;14(11):1063-1071.
PUB | DOI | WoS | PubMed | Europe PMC
 
[13]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Stolze Y, Bremges A, Rumming M, et al. Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels. 2016;9: 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[12]
2016 | Bielefelder E-Dissertation | PUB-ID: 2906743
Bremges A. Assembling the microbial dark matter. Bielefeld: Universität Bielefeld; 2016.
PUB | PDF
 
[11]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Maus I, Cibis KG, Bremges A, et al. Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology. 2016;232:50-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Wibberg D, Bremges A, Dammann-Kalinowski T, et al. Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology. 2016;232:61-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
Bremges A, Singer E, Woyke T, Sczyrba A. MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics. 2016;32(14):2199-2201.
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
Maus I, Koeck DE, Cibis KG, et al. Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates. Biotechnology for Biofuels. 2016;9(1): 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
Ortseifen V, Stolze Y, Maus I, et al. An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant. Journal of Biotechnology. 2016;231:268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906
Bremges A, Maus I, Belmann P, et al. Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant. GigaScience. 2015;4(1): 33.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[5]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
Kohrs F, Wolter S, Benndorf D, et al. Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities. Proteomics. 2015;15(20):3585-3589.
PUB | DOI | WoS | PubMed | Europe PMC
 
[4]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501
Belmann P, Dröge J, Bremges A, McHardy AC, Sczyrba A, Barton MD. Bioboxes: standardised containers for interchangeable bioinformatics software. GigaScience. 2015;4: 47.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
Wibberg D, Luque-Almagro VM, Igeño MI, et al. Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Journal of biotechnology. 2014;175:67-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
[2]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645192
Gillett A, Bergman P, Parsa R, Bremges A, Giegerich R, Jagodic M. A Silent Exonic SNP in Kdm3a Affects Nucleic Acids Structure but Does Not Regulate Experimental Autoimmune Encephalomyelitis. Plos One. 2013;8(12):e81912.
PUB | DOI | WoS | PubMed | Europe PMC
 
[1]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906810
Bremges A, Schirmer S, Giegerich R. Fine-tuning structural RNA alignments in the twilight zone. BMC Bioinformatics. 2010;11(1): 222.
PUB | DOI | WoS | PubMed | Europe PMC
 

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Zitationsstil: ama

Export / Einbettung