17 Publikationen
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plantsPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A (2018)
Microbial Biotechnology 11(4): 667-679. -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genomePUB | DOI | WoS | PubMed | Europe PMC
Verwaaijen B, Wibberg D, Nelkner J, Gordin M, Rupp O, Winkler A, Bremges A, Blom J, Grosch R, Pühler A, Schlüter A (2018)
Journal of Biotechology 267: 12-18. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics softwarePUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Sczyrba A, Hofmann P, Belmann P, Koslicki D, Janssen S, Dröge J, Gregor I, Majda S, Fiedler J, Dahms E, Bremges A, et al. (2017)
Nature Methods 14(11): 1063-1071. -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomesPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Maus I, Bremges A, Stolze Y, Hahnke S, Cibis KG, Koeck DE, Kim YS, Kreubel J, Hassa J, Wibberg D, Weimann A, et al. (2017)
Biotechnology for Biofuels 10(1): 264. -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolatesPUB | DOI | WoS | PubMed | Europe PMC
Maus I, Koeck DE, Cibis KG, Hahnke S, Kim YS, Langer T, Kreubel J, Erhard M, Bremges A, Off S, Stolze Y, et al. (2016)
Biotechnology for Biofuels 9(1): 171. -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729MeCorS: Metagenome-enabled error correction of single cell sequencing readsPUB | DOI | WoS | PubMed | Europe PMC
Bremges A, Singer E, Woyke T, Sczyrba A (2016)
Bioinformatics 32(14): 2199-2201. -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plantsPUB | PDF | DOI | WoS | PubMed | Europe PMC
Stolze Y, Bremges A, Rumming M, Henke C, Maus I, Pühler A, Sczyrba A, Schlüter A (2016)
Biotechnology for Biofuels 9(1): 156. -
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitmentPUB | DOI | WoS | PubMed | Europe PMC
Maus I, Cibis KG, Bremges A, Stolze Y, Wibberg D, Tomazetto G, Blom J, Sczyrba A, König H, Pühler A, Schlüter A (2016)
Journal of Biotechnology 232: 50-60. -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencingPUB | DOI | WoS | PubMed | Europe PMC
Wibberg D, Bremges A, Dammann-Kalinowski T, Maus I, Igeño MI, Vogelsang R, König C, Luque-Almagro VM, Roldán MD, Sczyrba A, Moreno-Vivián C, et al. (2016)
Journal of Biotechnology 232: 61-68. -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plantPUB | DOI | WoS | PubMed | Europe PMC
Ortseifen V, Stolze Y, Maus I, Sczyrba A, Bremges A, Albaum S, Jaenicke S, Fracowiak J, Pühler A, Schlüter A (2016)
Journal of Biotechnology 231: 268-279. -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plantPUB | PDF | DOI | WoS | PubMed | Europe PMC
Bremges A, Maus I, Belmann P, Eikmeyer FG, Winkler A, Albersmeier A, Pühler A, Schlüter A, Sczyrba A (2015)
GigaScience 4(1): 33. -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501Bioboxes: standardised containers for interchangeable bioinformatics softwarePUB | DOI | WoS | PubMed | Europe PMC
Belmann P, Dröge J, Bremges A, McHardy AC, Sczyrba A, Barton MD (2015)
GigaScience 4(1): 47. -
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communitiesPUB | DOI | WoS | PubMed | Europe PMC
Kohrs F, Wolter S, Benndorf D, Heyer R, Hoffmann M, Rapp E, Bremges A, Sczyrba A, Schlüter A, Reichl U (2015)
Proteomics 15(20): 3585-3589. -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344PUB | DOI | WoS | PubMed | Europe PMC
Wibberg D, Luque-Almagro VM, Igeño MI, Bremges A, Roldán MD, Merchán F, Sáez LP, Guijo MI, Manso MI, Macías D, Cabello P, et al. (2014)
Journal of biotechnology 175: 67-68. -
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645192A Silent Exonic SNP in Kdm3a Affects Nucleic Acids Structure but Does Not Regulate Experimental Autoimmune EncephalomyelitisPUB | DOI | WoS | PubMed | Europe PMC
Gillett A, Bergman P, Parsa R, Bremges A, Giegerich R, Jagodic M (2013)
Plos One 8(12): e81912. -
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785512Fine-tuning structural RNA alignments in the twilight zonePUB | PDF | DOI | WoS | PubMed | Europe PMC
Bremges A, Schirmer S, Giegerich R (2010)
BMC Bioinformatics 11(1): 222.