18 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985152Schmidt, Nicola, Sielemann, Katharina, Breitenbach, Sarah, Fuchs, Jörg, Pucker, Boas, Weisshaar, Bernd, Holtgräwe, Daniela, and Heitkam, Tony. 2023. “Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets”. The Plant Journal 118 (1): 171-190.
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980215Sielemann, Katharina, Pucker, Boas, Orsini, Elena, Elashry, Abdelnaser, Schulte, Lukas, Viehöver, Prisca, Müller, Andreas, Schechert, Axel, Weisshaar, Bernd, and Holtgräwe, Daniela. 2023. “Genomic characterization of a nematode tolerance locus in sugar beet”. BMC Genomics 24: 748.
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2023 | Datenpublikation | PUB-ID: 2966927Sielemann, Katharina, Pucker, Boas, Orsini, Elena, Elashry, Abdelnaser, Schulte, Lukas, Viehöver, Prisca, Müller, Andreas E., Schechert, Axel, Weisshaar, Bernd, and Holtgräwe, Daniela. 2023. Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University.
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967319Sielemann, Janik, Sielemann, Katharina, Brejová, Broňa, Vinař, Tomáš, and Chauve, Cedric. 2023. “plASgraph2: using graph neural networks to detect plasmid contigs from an assembly graph”. Frontiers in Microbiology 14: 1267695.
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2023 | Dissertation | PUB-ID: 2981102Sielemann, Katharina. 2023. Computational pangenomics and its application to sugar beet and crop wild relatives. Bielefeld: Universität Bielefeld.
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2023 | Datenpublikation | PUB-ID: 2966932Sielemann, Katharina, Schmidt, Nicola, Guzik, Jonas, Kalina, Natalie, Pucker, Boas, Viehöver, Prisca, Breitenbach, Sarah, Weisshaar, Bernd, Heitkam, Tony, and Holtgräwe, Daniela. 2023. Genome assembly and structural and functional annotation files for crop wild relatives of sugar beet. Bielefeld University.
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2023 | Preprint | Veröffentlicht | PUB-ID: 2980439Sielemann, Katharina, Schmidt, Nicola, Guzik, Jonas, Kalina, Natalie, Pucker, Boas, Viehöver, Prisca, Breitenbach, Sarah, Weisshaar, Bernd, Heitkam, Tony, and Holtgräwe, Daniela. 2023. “Pangenome of cultivated beet and crop wild relatives reveals parental relationships of a tetraploid wild beet”. bioRxiv.
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958188Sielemann, Katharina, Pucker, Boas, Schmidt, Nicola, Viehöver, Prisca, Weisshaar, Bernd, Heitkam, Tony, and Holtgräwe, Daniela. 2022. “Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives”. BMC Genomics 23: 113.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943037Sielemann, Katharina, Weisshaar, Bernd, and Pucker, Boas. 2021. “Reference-based QUantification Of gene Dispensability (QUOD)”. Plant Methods 17 (1): 18.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955789Gaertner, Anna, Bloebaum, Julia, Brodehl, Andreas, Klauke, Baerbel, Sielemann, Katharina, Kassner, Astrid, Fox, Henrik, et al. 2021. “The Combined Human Genotype of Truncating TTN and RBM20 Mutations Is Associated with Severe and Early Onset of Dilated Cardiomyopathy”. Genes 12 (6): 883.
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2020 | Datenpublikation | PUB-ID: 2946079Sielemann, Katharina, Weisshaar, Bernd, and Pucker, Boas. 2020. Reference-based QUantification Of gene Dispensability (QUOD) - test dataset. Bielefeld University.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311Frey, Katharina, and Pucker, Boas. 2020. “Animal, fungi, and plant genome sequences harbour different non-canonical splice sites”. Cells 9 (2): 458.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949125Höving, Anna L., Sielemann, Katharina, Greiner, Johannes, Kaltschmidt, Barbara, Knabbe, Cornelius, and Kaltschmidt, Christian. 2020. “Transcriptome Analysis Reveals High Similarities between Adult Human Cardiac Stem Cells and Neural Crest-Derived Stem Cells”. Biology 9 (12): 435.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076Sielemann, Katharina, Elbeck, Zaher, Gärtner, Anna, Brodehl, Andreas, Stanasiuk, Caroline, Fox, Henrik, Paluszkiewicz, Lech, et al. 2020. “Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes”. Genes 11 (12): 1430.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946066Sielemann, Katharina, Hafner, Alenka, and Pucker, Boas. 2020. “The reuse of public datasets in the life sciences: potential risks and rewards”. PeerJ 8: e9954.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698Pucker, Boas, Holtgräwe, Daniela, Stadermann, Kai Bernd, Frey, Katharina, Huettel, Bruno, Reinhardt, Richard, and Weisshaar, Bernd. 2019. “Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set”. PLoS One 14 (5): e0216233.
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2019 | Datenpublikation | PUB-ID: 2934220Pucker, Boas, and Frey, Katharina. 2019. RNA-Seq read coverage depth of splice sites in fungi. Bielefeld University.
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2019 | Datenpublikation | PUB-ID: 2934226Pucker, Boas, and Frey, Katharina. 2019. RNA-Seq read coverage depth of splice sites in animals. Bielefeld University.