PUB - Publikationen an der Universität Bielefeld

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• [18]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985152

  N. Schmidt, K. Sielemann, S. Breitenbach, J. Fuchs, B. Pucker, B. Weisshaar, D. Holtgräwe, and T. Heitkam, “Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets”, The Plant Journal, 2023, 118, 171-190.

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• [17]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980215

  K. Sielemann, B. Pucker, E. Orsini, A. Elashry, L. Schulte, P. Viehöver, A. Müller, A. Schechert, B. Weisshaar, and D. Holtgräwe, “Genomic characterization of a nematode tolerance locus in sugar beet”, BMC Genomics, 2023, 24, : 748.

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
   
• [16]
  

  2023 | Datenpublikation | PUB-ID: 2966927

  K. Sielemann, B. Pucker, E. Orsini, A. Elashry, L. Schulte, P. Viehöver, A. E. Müller, A. Schechert, B. Weisshaar, and D. Holtgräwe, Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0, Bielefeld University, 2023.

  PUB | Dateien verfügbar | DOI
   
• [15]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967319

  J. Sielemann, K. Sielemann, B. Brejová, T. Vinař, and C. Chauve, “plASgraph2: using graph neural networks to detect plasmid contigs from an assembly graph”, Frontiers in Microbiology , 2023, 14, : 1267695.

  PUB | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [14]
  

  2023 | Dissertation | PUB-ID: 2981102

  K. Sielemann, Computational pangenomics and its application to sugar beet and crop wild relatives, Universität Bielefeld, Bielefeld, 2023.

  PUB
   
• [13]
  

  2023 | Datenpublikation | PUB-ID: 2966932

  K. Sielemann, N. Schmidt, J. Guzik, N. Kalina, B. Pucker, P. Viehöver, S. Breitenbach, B. Weisshaar, T. Heitkam, and D. Holtgräwe, Genome assembly and structural and functional annotation files for crop wild relatives of sugar beet, Bielefeld University, 2023.

  PUB | Dateien verfügbar | DOI
   
• [12]
  

  2023 | Preprint | Veröffentlicht | PUB-ID: 2980439

  K. Sielemann, N. Schmidt, J. Guzik, N. Kalina, B. Pucker, P. Viehöver, S. Breitenbach, B. Weisshaar, T. Heitkam, and D. Holtgräwe, “Pangenome of cultivated beet and crop wild relatives reveals parental relationships of a tetraploid wild beet”, bioRxiv, 2023.

  PUB | DOI | Download (ext.) | Preprint | EBI - ENA Project
   
• [11]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958188

  K. Sielemann, B. Pucker, N. Schmidt, P. Viehöver, B. Weisshaar, T. Heitkam, and D. Holtgräwe, “Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives”, BMC Genomics, 2022, 23, : 113.

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
   
• [10]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943037

  K. Sielemann, B. Weisshaar, and B. Pucker, “Reference-based QUantification Of gene Dispensability (QUOD)”, Plant Methods, 2021, 17, : 18.

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• [9]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955789

  A. Gaertner, J. Bloebaum, A. Brodehl, B. Klauke, K. Sielemann, A. Kassner, H. Fox, M. Morshuis, J. Tiesmeier, U. Schulz, et al., “The Combined Human Genotype of Truncating TTN and RBM20 Mutations Is Associated with Severe and Early Onset of Dilated Cardiomyopathy”, Genes, 2021, 12, : 883.

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• [8]
  

  2020 | Datenpublikation | PUB-ID: 2946079

  K. Sielemann, B. Weisshaar, and B. Pucker, Reference-based QUantification Of gene Dispensability (QUOD) - test dataset, Bielefeld University, 2020.

  PUB | Dateien verfügbar | DOI
   
• [7]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311

  K. Frey, and B. Pucker, “Animal, fungi, and plant genome sequences harbour different non-canonical splice sites”, Cells, 2020, 9, : 458.

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• [6]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949125

  A. L. Höving, K. Sielemann, J. Greiner, B. Kaltschmidt, C. Knabbe, and C. Kaltschmidt, “Transcriptome Analysis Reveals High Similarities between Adult Human Cardiac Stem Cells and Neural Crest-Derived Stem Cells”, Biology, 2020, 9, : 435.

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• [5]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076

  K. Sielemann, Z. Elbeck, A. Gärtner, A. Brodehl, C. Stanasiuk, H. Fox, L. Paluszkiewicz, J. Tiesmeier, S. Wlost, J. Gummert, et al., “Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes”, Genes, 2020, 11, : 1430.

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• [4]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946066

  K. Sielemann, A. Hafner, and B. Pucker, “The reuse of public datasets in the life sciences: potential risks and rewards”, PeerJ, 2020, 8, : e9954.

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• [3]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698

  B. Pucker, D. Holtgräwe, K. B. Stadermann, K. Frey, B. Huettel, R. Reinhardt, and B. Weisshaar, “Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set”, PLoS One, 2019, 14, : e0216233.

  PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | GenBank
   
• [2]
  

  2019 | Datenpublikation | PUB-ID: 2934220

  B. Pucker, and K. Frey, RNA-Seq read coverage depth of splice sites in fungi, Bielefeld University, 2019.

  PUB | Dateien verfügbar | DOI
   
• [1]
  

  2019 | Datenpublikation | PUB-ID: 2934226

  B. Pucker, and K. Frey, RNA-Seq read coverage depth of splice sites in animals, Bielefeld University, 2019.

  PUB | Dateien verfügbar | DOI