18 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985152Schmidt, N., Sielemann, K., Breitenbach, S., Fuchs, J., Pucker, B., Weisshaar, B., Holtgräwe, D., et al. (2023). Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets. The Plant Journal, 118(1), 171-190. https://doi.org/10.1111/tpj.16599PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980215Sielemann, K., Pucker, B., Orsini, E., Elashry, A., Schulte, L., Viehöver, P., Müller, A., et al. (2023). Genomic characterization of a nematode tolerance locus in sugar beet. BMC Genomics, 24, 748. https://doi.org/10.1186/s12864-023-09823-2PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
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2023 | Datenpublikation | PUB-ID: 2966927Sielemann, K., Pucker, B., Orsini, E., Elashry, A., Schulte, L., Viehöver, P., Müller, A. E., et al. (2023). Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University. https://doi.org/10.4119/unibi/2966927PUB | Dateien verfügbar | DOI
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967319Sielemann, J., Sielemann, K., Brejová, B., Vinař, T., & Chauve, C. (2023). plASgraph2: using graph neural networks to detect plasmid contigs from an assembly graph. Frontiers in Microbiology , 14, 1267695. https://doi.org/10.3389/fmicb.2023.1267695PUB | DOI | WoS | PubMed | Europe PMC | Preprint
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2023 | Dissertation | PUB-ID: 2981102Sielemann, K. (2023). Computational pangenomics and its application to sugar beet and crop wild relatives. Bielefeld: Universität Bielefeld.PUB
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2023 | Datenpublikation | PUB-ID: 2966932Sielemann, K., Schmidt, N., Guzik, J., Kalina, N., Pucker, B., Viehöver, P., Breitenbach, S., et al. (2023). Genome assembly and structural and functional annotation files for crop wild relatives of sugar beet. Bielefeld University. https://doi.org/10.4119/unibi/2966932PUB | Dateien verfügbar | DOI
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2023 | Preprint | Veröffentlicht | PUB-ID: 2980439Sielemann, K., Schmidt, N., Guzik, J., Kalina, N., Pucker, B., Viehöver, P., Breitenbach, S., et al. (2023). Pangenome of cultivated beet and crop wild relatives reveals parental relationships of a tetraploid wild beet. bioRxiv. https://doi.org/10.1101/2023.06.28.546919PUB | DOI | Download (ext.) | Preprint | EBI - ENA Project
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958188Sielemann, K., Pucker, B., Schmidt, N., Viehöver, P., Weisshaar, B., Heitkam, T., & Holtgräwe, D. (2022). Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives. BMC Genomics, 23, 113. https://doi.org/10.1186/s12864-022-08336-8PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943037Sielemann, K., Weisshaar, B., & Pucker, B. (2021). Reference-based QUantification Of gene Dispensability (QUOD). Plant Methods, 17(1), 18. https://doi.org/10.1186/s13007-021-00718-5PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955789Gaertner, A., Bloebaum, J., Brodehl, A., Klauke, B., Sielemann, K., Kassner, A., Fox, H., et al. (2021). The Combined Human Genotype of Truncating TTN and RBM20 Mutations Is Associated with Severe and Early Onset of Dilated Cardiomyopathy. Genes, 12(6), 883. https://doi.org/10.3390/genes12060883PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Datenpublikation | PUB-ID: 2946079Sielemann, K., Weisshaar, B., & Pucker, B. (2020). Reference-based QUantification Of gene Dispensability (QUOD) - test dataset. Bielefeld University. doi:10.4119/unibi/2946079PUB | Dateien verfügbar | DOI
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311Frey, K., & Pucker, B. (2020). Animal, fungi, and plant genome sequences harbour different non-canonical splice sites. Cells, 9(2), 458. https://doi.org/10.3390/cells9020458PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949125Höving, A. L., Sielemann, K., Greiner, J., Kaltschmidt, B., Knabbe, C., & Kaltschmidt, C. (2020). Transcriptome Analysis Reveals High Similarities between Adult Human Cardiac Stem Cells and Neural Crest-Derived Stem Cells. Biology, 9(12), 435. https://doi.org/10.3390/biology9120435PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076Sielemann, K., Elbeck, Z., Gärtner, A., Brodehl, A., Stanasiuk, C., Fox, H., Paluszkiewicz, L., et al. (2020). Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes. Genes, 11(12), 1430. https://doi.org/10.3390/genes11121430PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946066Sielemann, K., Hafner, A., & Pucker, B. (2020). The reuse of public datasets in the life sciences: potential risks and rewards. PeerJ, 8, e9954. doi:10.7717/peerj.9954PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698Pucker, B., Holtgräwe, D., Stadermann, K. B., Frey, K., Huettel, B., Reinhardt, R., & Weisshaar, B. (2019). Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLoS One, 14(5), e0216233. doi:10.1371/journal.pone.0216233PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | GenBank
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2019 | Datenpublikation | PUB-ID: 2934220Pucker, B., & Frey, K. (2019). RNA-Seq read coverage depth of splice sites in fungi. Bielefeld University. doi:10.4119/unibi/2934220PUB | Dateien verfügbar | DOI
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2019 | Datenpublikation | PUB-ID: 2934226Pucker, B., & Frey, K. (2019). RNA-Seq read coverage depth of splice sites in animals. Bielefeld University. doi:10.4119/unibi/2934226PUB | Dateien verfügbar | DOI