18 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985152Schmidt, N., Sielemann, K., Breitenbach, S., Fuchs, J., Pucker, B., Weisshaar, B., Holtgräwe, D., and Heitkam, T. (2023). Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets. The Plant Journal 118, 171-190.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980215Sielemann, K., Pucker, B., Orsini, E., Elashry, A., Schulte, L., Viehöver, P., Müller, A., Schechert, A., Weisshaar, B., and Holtgräwe, D. (2023). Genomic characterization of a nematode tolerance locus in sugar beet. BMC Genomics 24:748.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
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2023 | Datenpublikation | PUB-ID: 2966927Sielemann, K., Pucker, B., Orsini, E., Elashry, A., Schulte, L., Viehöver, P., Müller, A. E., Schechert, A., Weisshaar, B., and Holtgräwe, D. (2023). Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University.PUB | Dateien verfügbar | DOI
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967319Sielemann, J., Sielemann, K., Brejová, B., Vinař, T., and Chauve, C. (2023). plASgraph2: using graph neural networks to detect plasmid contigs from an assembly graph. Frontiers in Microbiology 14:1267695.PUB | DOI | WoS | PubMed | Europe PMC | Preprint
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2023 | Dissertation | PUB-ID: 2981102Sielemann, K. (2023). Computational pangenomics and its application to sugar beet and crop wild relatives. Bielefeld: Universität Bielefeld.PUB
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2023 | Datenpublikation | PUB-ID: 2966932Sielemann, K., Schmidt, N., Guzik, J., Kalina, N., Pucker, B., Viehöver, P., Breitenbach, S., Weisshaar, B., Heitkam, T., and Holtgräwe, D. (2023). Genome assembly and structural and functional annotation files for crop wild relatives of sugar beet. Bielefeld University.PUB | Dateien verfügbar | DOI
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2023 | Preprint | Veröffentlicht | PUB-ID: 2980439Sielemann, K., Schmidt, N., Guzik, J., Kalina, N., Pucker, B., Viehöver, P., Breitenbach, S., Weisshaar, B., Heitkam, T., and Holtgräwe, D. (2023). Pangenome of cultivated beet and crop wild relatives reveals parental relationships of a tetraploid wild beet. bioRxiv.PUB | DOI | Download (ext.) | Preprint | EBI - ENA Project
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958188Sielemann, K., Pucker, B., Schmidt, N., Viehöver, P., Weisshaar, B., Heitkam, T., and Holtgräwe, D. (2022). Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives. BMC Genomics 23:113.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943037Sielemann, K., Weisshaar, B., and Pucker, B. (2021). Reference-based QUantification Of gene Dispensability (QUOD). Plant Methods 17:18.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955789Gaertner, A., Bloebaum, J., Brodehl, A., Klauke, B., Sielemann, K., Kassner, A., Fox, H., Morshuis, M., Tiesmeier, J., Schulz, U., et al. (2021). The Combined Human Genotype of Truncating TTN and RBM20 Mutations Is Associated with Severe and Early Onset of Dilated Cardiomyopathy. Genes 12:883.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Datenpublikation | PUB-ID: 2946079Sielemann, K., Weisshaar, B., and Pucker, B. (2020). Reference-based QUantification Of gene Dispensability (QUOD) - test dataset. Bielefeld University.PUB | Dateien verfügbar | DOI
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311Frey, K., and Pucker, B. (2020). Animal, fungi, and plant genome sequences harbour different non-canonical splice sites. Cells 9:458.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949125Höving, A. L., Sielemann, K., Greiner, J., Kaltschmidt, B., Knabbe, C., and Kaltschmidt, C. (2020). Transcriptome Analysis Reveals High Similarities between Adult Human Cardiac Stem Cells and Neural Crest-Derived Stem Cells. Biology 9:435.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076Sielemann, K., Elbeck, Z., Gärtner, A., Brodehl, A., Stanasiuk, C., Fox, H., Paluszkiewicz, L., Tiesmeier, J., Wlost, S., Gummert, J., et al. (2020). Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes. Genes 11:1430.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946066Sielemann, K., Hafner, A., and Pucker, B. (2020). The reuse of public datasets in the life sciences: potential risks and rewards. PeerJ 8:e9954.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698Pucker, B., Holtgräwe, D., Stadermann, K. B., Frey, K., Huettel, B., Reinhardt, R., and Weisshaar, B. (2019). Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLoS One 14:e0216233.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | GenBank
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2019 | Datenpublikation | PUB-ID: 2934220Pucker, B., and Frey, K. (2019). RNA-Seq read coverage depth of splice sites in fungi. Bielefeld University.PUB | Dateien verfügbar | DOI
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2019 | Datenpublikation | PUB-ID: 2934226Pucker, B., and Frey, K. (2019). RNA-Seq read coverage depth of splice sites in animals. Bielefeld University.PUB | Dateien verfügbar | DOI