Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0
Sielemann K, Pucker B, Orsini E, Elashry A, Schulte L, Viehöver P, Müller AE, Schechert A, Weisshaar B, Wulfhorst M, Holtgräwe D (2023)
Bielefeld University.
Datenpublikation
Download
KWS2320ONT_v1.0_p1.0.gff
39.35 MB
U2BvONT_v1.0_p1.0.gff
38.18 MB
KWS2320ONT_v1_p1_functional_annotation.txt
3.82 MB
Alle
Creator
Sielemann, KatharinaUniBi 
;
Pucker, Boas;
Orsini, Elena;
Elashry, Abdelnaser;
Schulte, Lukas;
Viehöver, PriscaUniBi;
Müller, Andreas E.;
Schechert, Axel;
Weisshaar, BerndUniBi ;
Wulfhorst, MurielUniBi;
Holtgräwe, DanielaUniBi
;
Pucker, Boas;
Orsini, Elena;
Elashry, Abdelnaser;
Schulte, Lukas;
Viehöver, PriscaUniBi;
Müller, Andreas E.;
Schechert, Axel;
Weisshaar, BerndUniBi ;
Wulfhorst, MurielUniBi;
Holtgräwe, DanielaUniBi Einrichtung
Abstract / Bemerkung
For the project 'Genomic characterization of a nematode tolerance locus in sugar beet' two long read-based genome assemblies were generated and annotated (KWS2320ONT_v1.0 and Strube U2BvONT_v1.0). This data publication contains the genome assembly sequences, structural and functional annotation files, as well as mRNA coverage/length files.
The v2-version contains an updated version of the structural and functional gene annotation. Mainly splice site variants were merged.
Erscheinungsjahr
2023
Copyright und Lizenzen
Page URI
https://pub.uni-bielefeld.de/record/2966927
Zitieren
Sielemann K, Pucker B, Orsini E, et al. Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University; 2023.
Sielemann, K., Pucker, B., Orsini, E., Elashry, A., Schulte, L., Viehöver, P., Müller, A. E., et al. (2023). Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University. https://doi.org/10.4119/unibi/2966927
Sielemann, Katharina, Pucker, Boas, Orsini, Elena, Elashry, Abdelnaser, Schulte, Lukas, Viehöver, Prisca, Müller, Andreas E., et al. 2023. Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University.
Sielemann, K., Pucker, B., Orsini, E., Elashry, A., Schulte, L., Viehöver, P., Müller, A. E., Schechert, A., Weisshaar, B., Wulfhorst, M., et al. (2023). Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University.
Sielemann, K., et al., 2023. Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0, Bielefeld University.
K. Sielemann, et al., Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0, Bielefeld University, 2023.
Sielemann, K., Pucker, B., Orsini, E., Elashry, A., Schulte, L., Viehöver, P., Müller, A.E., Schechert, A., Weisshaar, B., Wulfhorst, M., Holtgräwe, D.: Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University (2023).
Sielemann, Katharina, Pucker, Boas, Orsini, Elena, Elashry, Abdelnaser, Schulte, Lukas, Viehöver, Prisca, Müller, Andreas E., Schechert, Axel, Weisshaar, Bernd, Wulfhorst, Muriel, and Holtgräwe, Daniela. Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University, 2023.
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KWS2320ONT_v1.0_p1.0.gff
39.35 MB
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structural annotation in gff3 format
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Open Access
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2022-12-15T12:34:45Z
MD5 Prüfsumme
d50b987c7afb1782df79eb3eb8bbc7fb
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U2BvONT_v1.0_p1.0.gff
38.18 MB
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structural annotation in gff3 format
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Open Access
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2022-12-15T12:34:46Z
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3716e019d4d9ed209c6cd963657369e3
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KWS2320ONT_v1.0.fasta.gz
168.90 MB
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U2BvONT_v1.0.fasta.gz
173.72 MB
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2023-07-10T11:22:32Z
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KWS2320ONT_v2.0_p1.0.gff
38.43 MB
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2024-08-01T11:12:34Z
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Material in PUB:
Teil von PUB Eintrag
Genomic characterization of a nematode tolerance locus in sugar beet
Sielemann K, Pucker B, Orsini E, Elashry A, Schulte L, Viehöver P, Müller A, Schechert A, Weisshaar B, Holtgräwe D (2023)
BMC Genomics 24: 748.
Sielemann K, Pucker B, Orsini E, Elashry A, Schulte L, Viehöver P, Müller A, Schechert A, Weisshaar B, Holtgräwe D (2023)
BMC Genomics 24: 748.
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