18 Publikationen

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  • [18]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2980215 OA
    Sielemann, Katharina, Pucker, Boas, Orsini, Elena, Elashry, Abdelnaser, Schulte, Lukas, Viehöver, Prisca, Müller, Andreas, Schechert, Axel, Weisshaar, Bernd, and Holtgräwe, Daniela. “Genomic characterization of a nematode tolerance locus in sugar beet”. BMC Genomics 24 (2023): 748.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
     
  • [17]
    2023 | Datenpublikation | PUB-ID: 2966927 OA
    Sielemann, Katharina, Pucker, Boas, Orsini, Elena, Elashry, Abdelnaser, Schulte, Lukas, Viehöver, Prisca, Müller, Andreas E., Schechert, Axel, Weisshaar, Bernd, and Holtgräwe, Daniela. Genome assembly, structural and functional annotation, and mRNA coverage/length files for KWS2320ONT_v1.0 and Strube U2BvONT_v1.0. Bielefeld University, 2023.
    PUB | Dateien verfügbar | DOI
     
  • [16]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985152
    Schmidt, Nicola, Sielemann, Katharina, Breitenbach, Sarah, Fuchs, Jörg, Pucker, Boas, Weisshaar, Bernd, Holtgräwe, Daniela, and Heitkam, Tony. “Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets”. The Plant Journal (2023).
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
     
  • [15]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967319
    Sielemann, Janik, Sielemann, Katharina, Brejová, Broňa, Vinař, Tomáš, and Chauve, Cedric. “plASgraph2: using graph neural networks to detect plasmid contigs from an assembly graph”. Frontiers in Microbiology 14 (2023): 1267695.
    PUB | DOI | WoS | PubMed | Europe PMC | Preprint
     
  • [14]
    2023 | Dissertation | PUB-ID: 2981102
    Sielemann, Katharina. Computational pangenomics and its application to sugar beet and crop wild relatives. Bielefeld: Universität Bielefeld, 2023.
    PUB
     
  • [13]
    2023 | Datenpublikation | PUB-ID: 2966932 OA
    Sielemann, Katharina, Schmidt, Nicola, Guzik, Jonas, Kalina, Natalie, Pucker, Boas, Viehöver, Prisca, Breitenbach, Sarah, Weisshaar, Bernd, Heitkam, Tony, and Holtgräwe, Daniela. Genome assembly and structural and functional annotation files for crop wild relatives of sugar beet. Bielefeld University, 2023.
    PUB | Dateien verfügbar | DOI
     
  • [12]
    2023 | Preprint | Veröffentlicht | PUB-ID: 2980439
    Sielemann, Katharina, Schmidt, Nicola, Guzik, Jonas, Kalina, Natalie, Pucker, Boas, Viehöver, Prisca, Breitenbach, Sarah, Weisshaar, Bernd, Heitkam, Tony, and Holtgräwe, Daniela. “Pangenome of cultivated beet and crop wild relatives reveals parental relationships of a tetraploid wild beet”. bioRxiv (2023).
    PUB | DOI | Download (ext.) | Preprint | EBI - ENA Project
     
  • [11]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958188 OA
    Sielemann, Katharina, Pucker, Boas, Schmidt, Nicola, Viehöver, Prisca, Weisshaar, Bernd, Heitkam, Tony, and Holtgräwe, Daniela. “Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives”. BMC Genomics 23 (2022): 113.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
     
  • [10]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943037 OA
    Sielemann, Katharina, Weisshaar, Bernd, and Pucker, Boas. “Reference-based QUantification Of gene Dispensability (QUOD)”. Plant Methods 17.1 (2021): 18.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
     
  • [9]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955789
    Gaertner, Anna, Bloebaum, Julia, Brodehl, Andreas, Klauke, Baerbel, Sielemann, Katharina, Kassner, Astrid, Fox, Henrik, Morshuis, Michiel, Tiesmeier, Jens, Schulz, Uwe, Knoell, Ralph, Gummert, Jan, and Milting, Hendrik. “The Combined Human Genotype of Truncating TTN and RBM20 Mutations Is Associated with Severe and Early Onset of Dilated Cardiomyopathy”. Genes 12.6 (2021): 883.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [8]
    2020 | Datenpublikation | PUB-ID: 2946079 OA
    Sielemann, Katharina, Weisshaar, Bernd, and Pucker, Boas. Reference-based QUantification Of gene Dispensability (QUOD) - test dataset. Bielefeld University, 2020.
    PUB | Dateien verfügbar | DOI
     
  • [7]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311 OA
    Frey, Katharina, and Pucker, Boas. “Animal, fungi, and plant genome sequences harbour different non-canonical splice sites”. Cells 9.2 (2020): 458.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
     
  • [6]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949125 OA
    Höving, Anna L., Sielemann, Katharina, Greiner, Johannes, Kaltschmidt, Barbara, Knabbe, Cornelius, and Kaltschmidt, Christian. “Transcriptome Analysis Reveals High Similarities between Adult Human Cardiac Stem Cells and Neural Crest-Derived Stem Cells”. Biology 9.12 (2020): 435.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [5]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076 OA
    Sielemann, Katharina, Elbeck, Zaher, Gärtner, Anna, Brodehl, Andreas, Stanasiuk, Caroline, Fox, Henrik, Paluszkiewicz, Lech, Tiesmeier, Jens, Wlost, Stefan, Gummert, Jan, Albaum, Stefan, Sielemann, Janik, Knöll, Ralph, and Milting, Hendrik. “Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes”. Genes 11.12 (2020): 1430.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [4]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946066 OA
    Sielemann, Katharina, Hafner, Alenka, and Pucker, Boas. “The reuse of public datasets in the life sciences: potential risks and rewards”. PeerJ 8 (2020): e9954.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [3]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698 OA
    Pucker, Boas, Holtgräwe, Daniela, Stadermann, Kai Bernd, Frey, Katharina, Huettel, Bruno, Reinhardt, Richard, and Weisshaar, Bernd. “Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set”. PLoS One 14.5 (2019): e0216233.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | GenBank
     
  • [2]
    2019 | Datenpublikation | PUB-ID: 2934220 OA
    Pucker, Boas, and Frey, Katharina. RNA-Seq read coverage depth of splice sites in fungi. Bielefeld University, 2019.
    PUB | Dateien verfügbar | DOI
     
  • [1]
    2019 | Datenpublikation | PUB-ID: 2934226 OA
    Pucker, Boas, and Frey, Katharina. RNA-Seq read coverage depth of splice sites in animals. Bielefeld University, 2019.
    PUB | Dateien verfügbar | DOI
     

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