18 Publikationen
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2022 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2968237
Rubert, D., Dias Vieira Braga, M.: Gene Orthology Inference via Large-Scale Rearrangements for Partially Assembled Genomes. In: Boucher, C. and Rahmann, S. (eds.) 22nd International Workshop on Algorithms in Bioinformatics (WABI 2022). Leibniz International Proceedings in Informatics (LIPIcs). 242, Schloss Dagstuhl, Leibniz-Zentrum für Informatik, Dagstuhl (2022).PUB | PDF | DOI | Download (ext.) -
2022 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2965058
Silva, H.O.M., Rubert, D., Araujo, E., Martinez, F.V.: Algorithms for a Restricted Genome Median Problem. In: Bezerra Campêlo Neto, M., Gomes Fernandes, C., and Fernandes dos Santos, V. (eds.) Anais do VII Encontro de Teoria da Computação (ETC 2022) = Proceedings of the 7th Theory of Computation Meeting . p. 45-48. Sociedade Brasileira de Computação - SBC, Porto Alegre, RS (2022).PUB | PDF | DOI | Download (ext.)
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959611Rubert, D., Doerr, D., Dias Vieira Braga, M.: The potential of family-free rearrangements towards gene orthology inference. Journal of Bioinformatics and Computational Biology. 19, : 2140014 (2021).PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2965069
Araujo, E., Rozante, L.C., Rubert, D., Martinez, F.V.: Algorithms for Normalized Multiple Sequence Alignments. In: Ahn, H.-K. and Sadakane, K. (eds.) 32nd International Symposium on Algorithms and Computation (ISAAC 2021). Leibniz International Proceedings in Informatics (LIPIcs). 212, p. 40:1-40:16. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, Dagstuhl, Germany (2021).PUB | PDF | DOI | Download (ext.)
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965062Stefanes, M.A., Rubert, D., Soares, J.: Scalable parallel algorithms for maximum matching and Hamiltonian circuit in convex bipartite graphs. Theoretical Computer Science. 804, 58-71 (2020).PUB | DOI | Download (ext.) | WoS
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2020 | Preprint | Veröffentlicht | PUB-ID: 2943670Rubert, D., Araujo, E., Stefanes, M.A., Stoye, J., Martinez, F.V.: On motifs in colored graphs. arXiv:2005.13634. (2020).PUB | Download (ext.) | arXiv
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2020 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2965072
Rubert, D., Martinez, F.V., Dias Vieira Braga, M.: Natural Family-Free Genomic Distance. In: Kingsford, C. and Pisanti, N. (eds.) 20th International Workshop on Algorithms in Bioinformatics (WABI 2020). Leibniz International Proceedings in Informatics (LIPIcs). 172, p. 3:1-3:23. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, Dagstuhl, Germany (2020).PUB | PDF | DOI | Download (ext.)
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2020 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2965061
Rubert, D., Stoye, J., Martinez, F.H.V.: Distance and Similarity Measures in Comparative Genomics. In: Avila Vecchiato , D. (ed.) Anais do Concurso de Teses e Dissertações da SBC (CTD-SBC 2020) = Proceedings of the 33rd Thesis and Dissertation Contest . p. 7-12. Sociedade Brasileira de Computação - SBC, Porto Alegre, RS (2020).PUB | PDF | DOI | Download (ext.)
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2019 | Datenpublikation | PUB-ID: 2936848
Dörr, D., Rubert, D.: Supplementary Data for "Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants". Bielefeld University (2019).PUB | Dateien verfügbar | DOI
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2913015Rubert, D., Medeiros, G.L., Hoshino, E.A., Dias Vieira Braga, M., Stoye, J., Martinez, F.H.V.: Algorithms for Computing the Family-Free Genomic Similarity under DCJ. In: Meidanis, J. and Nakhleh, L. (eds.) Comparative Genomics. RECOMB-CG 2017. Lecture Notes in Bioinformatics. 10562, p. 76-100. Springer Verlag, Cham (2017).PUB | DOI
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2903708Rubert, D., Feijão, P., Dias Vieira Braga, M., Stoye, J., Martinez, F.H.V.: A Linear Time Approximation Algorithm for the DCJ Distance for Genomes with Bounded Number of Duplicates. In: Frith, M. and Storm Pedersen, C.N. (eds.) Algorithms in Bioinformatics. WABI 2016. Lecture Notes in Bioinformatics. 9838, p. 293-306. Springer, Cham (2016).PUB | DOI
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2015 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2965063Rubert, D., Araujo, E., Stefanes, M.A.: SIMBio: Searching and inferring colorful motifs in biological networks. 2015 IEEE 15th International Conference on Bioinformatics and Bioengineering (BIBE). p. 1-6. IEEE (2015).PUB | DOI | Download (ext.)